Metagenome / Metatranscriptome Family F064307

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064307
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	47 residues
Representative Sequence	VDWFDLTHWQAILAAIVAIGTPIVAMLVVAILGWPLLRWFGSLFKRKG
Number of Associated Samples	67
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	75.00 %
% of genes near scaffold ends (potentially truncated)	60.16 %
% of genes from short scaffolds (< 2000 bps)	89.06 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (75.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.375 % of family members)
Environment Ontology (ENVO)	Unclassified (60.156 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.062 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.21% β-sheet: 0.00% Coil/Unstructured: 40.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF00313	CSD	1.56
PF00027	cNMP_binding	0.78
PF00486	Trans_reg_C	0.78
PF02627	CMD	0.78
PF08734	GYD	0.78
PF04392	ABC_sub_bind	0.78
PF13202	EF-hand_5	0.78
PF04126	Cyclophil_like	0.78
PF13365	Trypsin_2	0.78
PF00589	Phage_integrase	0.78
PF13936	HTH_38	0.78
PF11272	DUF3072	0.78
PF00156	Pribosyltran	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.78
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.78
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.78
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
All Organisms	root	All Organisms	25.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
cellular organisms	root	All Organisms → cellular organisms	25.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.53 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15.62 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.25 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.47 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.78 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.47 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.69 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.78 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.47 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.91 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.47 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	3.12 %
Parcubacteria group bacterium GW2011_GWA2_47_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	0.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.47 %
Bradyrhizobium sp. ARR65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	3.12 %
Parcubacteria group bacterium GW2011_GWA2_47_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	0.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10016763	Not Available	1767	Open in IMG/M
3300004633\|Ga0066395_10116809	Not Available	1310	Open in IMG/M
3300005332\|Ga0066388_101906045	Not Available	1061	Open in IMG/M
3300005332\|Ga0066388_103258468	Not Available	829	Open in IMG/M
3300005332\|Ga0066388_104127537	Not Available	740	Open in IMG/M
3300005332\|Ga0066388_104282037	Not Available	727	Open in IMG/M
3300005332\|Ga0066388_104288706	Not Available	727	Open in IMG/M
3300005332\|Ga0066388_105223824	Not Available	659	Open in IMG/M
3300005332\|Ga0066388_108002416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	529	Open in IMG/M
3300005363\|Ga0008090_15646059	Not Available	786	Open in IMG/M
3300005764\|Ga0066903_100998206	Not Available	1530	Open in IMG/M
3300005764\|Ga0066903_102344802	All Organisms → cellular organisms → Bacteria → Proteobacteria	1031	Open in IMG/M
3300005764\|Ga0066903_104127826	Not Available	778	Open in IMG/M
3300005764\|Ga0066903_104152598	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300005764\|Ga0066903_104387146	Not Available	753	Open in IMG/M
3300005764\|Ga0066903_105274701	Not Available	683	Open in IMG/M
3300005764\|Ga0066903_105538046	Not Available	665	Open in IMG/M
3300005764\|Ga0066903_106376460	Not Available	615	Open in IMG/M
3300005764\|Ga0066903_106773495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300005764\|Ga0066903_108554041	Not Available	521	Open in IMG/M
3300006102\|Ga0075015_100850354	Not Available	550	Open in IMG/M
3300009792\|Ga0126374_10014890	All Organisms → cellular organisms → Bacteria → Proteobacteria	3220	Open in IMG/M
3300009792\|Ga0126374_10165471	Not Available	1359	Open in IMG/M
3300010046\|Ga0126384_11028930	Not Available	751	Open in IMG/M
3300010048\|Ga0126373_10903769	Not Available	947	Open in IMG/M
3300010048\|Ga0126373_12444354	Not Available	582	Open in IMG/M
3300010358\|Ga0126370_10102667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1982	Open in IMG/M
3300010359\|Ga0126376_11569553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	689	Open in IMG/M
3300010360\|Ga0126372_10744121	All Organisms → cellular organisms → Bacteria → Proteobacteria	963	Open in IMG/M
3300010360\|Ga0126372_10841952	Not Available	913	Open in IMG/M
3300010361\|Ga0126378_13457278	Not Available	501	Open in IMG/M
3300010366\|Ga0126379_10033478	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	4048	Open in IMG/M
3300010366\|Ga0126379_10220972	Not Available	1840	Open in IMG/M
3300010366\|Ga0126379_10263323	Not Available	1707	Open in IMG/M
3300010366\|Ga0126379_12741203	Not Available	589	Open in IMG/M
3300010376\|Ga0126381_103040299	Not Available	666	Open in IMG/M
3300010376\|Ga0126381_104648141	Not Available	529	Open in IMG/M
3300010398\|Ga0126383_10839720	Not Available	1003	Open in IMG/M
3300012948\|Ga0126375_10697573	Not Available	790	Open in IMG/M
3300012948\|Ga0126375_11247796	Not Available	621	Open in IMG/M
3300012971\|Ga0126369_10248939	Not Available	1747	Open in IMG/M
3300016270\|Ga0182036_10051487	Not Available	2588	Open in IMG/M
3300016319\|Ga0182033_10208278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	1561	Open in IMG/M
3300016319\|Ga0182033_10435349	Not Available	1115	Open in IMG/M
3300016319\|Ga0182033_11648838	Not Available	580	Open in IMG/M
3300016319\|Ga0182033_11771348	Not Available	560	Open in IMG/M
3300016341\|Ga0182035_10067962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2494	Open in IMG/M
3300016341\|Ga0182035_10738822	Not Available	860	Open in IMG/M
3300016387\|Ga0182040_11540813	Not Available	565	Open in IMG/M
3300016404\|Ga0182037_10064535	Not Available	2508	Open in IMG/M
3300016404\|Ga0182037_10242672	Not Available	1421	Open in IMG/M
3300016404\|Ga0182037_10852810	Not Available	788	Open in IMG/M
3300016404\|Ga0182037_11723858	Not Available	559	Open in IMG/M
3300016445\|Ga0182038_11668985	Not Available	574	Open in IMG/M
3300017943\|Ga0187819_10041029	Not Available	2740	Open in IMG/M
3300021560\|Ga0126371_10367741	Not Available	1575	Open in IMG/M
3300021560\|Ga0126371_10678587	Not Available	1179	Open in IMG/M
3300021560\|Ga0126371_12062272	Not Available	687	Open in IMG/M
3300021560\|Ga0126371_12159034	Not Available	672	Open in IMG/M
3300021560\|Ga0126371_12559996	Not Available	618	Open in IMG/M
3300021560\|Ga0126371_12865257	Not Available	585	Open in IMG/M
3300026866\|Ga0207786_117501	Not Available	575	Open in IMG/M
3300026908\|Ga0207787_1016444	Not Available	733	Open in IMG/M
3300026990\|Ga0207824_1003936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1749	Open in IMG/M
3300031545\|Ga0318541_10185513	Not Available	1149	Open in IMG/M
3300031546\|Ga0318538_10655564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	569	Open in IMG/M
3300031561\|Ga0318528_10565975	Not Available	610	Open in IMG/M
3300031564\|Ga0318573_10758306	Not Available	521	Open in IMG/M
3300031573\|Ga0310915_10068132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	2338	Open in IMG/M
3300031573\|Ga0310915_10703585	All Organisms → cellular organisms → Bacteria → Proteobacteria	713	Open in IMG/M
3300031573\|Ga0310915_10762677	Not Available	681	Open in IMG/M
3300031573\|Ga0310915_10975288	Not Available	592	Open in IMG/M
3300031668\|Ga0318542_10014440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3097	Open in IMG/M
3300031680\|Ga0318574_10051379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2170	Open in IMG/M
3300031719\|Ga0306917_10414187	Not Available	1053	Open in IMG/M
3300031719\|Ga0306917_11432256	Not Available	532	Open in IMG/M
3300031724\|Ga0318500_10744548	Not Available	501	Open in IMG/M
3300031736\|Ga0318501_10581490	Not Available	614	Open in IMG/M
3300031744\|Ga0306918_10422405	Not Available	1040	Open in IMG/M
3300031744\|Ga0306918_11430156	Not Available	529	Open in IMG/M
3300031747\|Ga0318502_10074239	Not Available	1841	Open in IMG/M
3300031763\|Ga0318537_10053661	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300031764\|Ga0318535_10435936	Not Available	584	Open in IMG/M
3300031770\|Ga0318521_10375298	Not Available	845	Open in IMG/M
3300031793\|Ga0318548_10218209	Not Available	937	Open in IMG/M
3300031795\|Ga0318557_10205674	Not Available	899	Open in IMG/M
3300031797\|Ga0318550_10593382	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300031819\|Ga0318568_10826259	Not Available	574	Open in IMG/M
3300031833\|Ga0310917_10245655	Not Available	1204	Open in IMG/M
3300031833\|Ga0310917_10272858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1141	Open in IMG/M
3300031835\|Ga0318517_10562796	Not Available	513	Open in IMG/M
3300031890\|Ga0306925_10107422	All Organisms → cellular organisms → Bacteria → Proteobacteria	2974	Open in IMG/M
3300031890\|Ga0306925_10371776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1534	Open in IMG/M
3300031890\|Ga0306925_11446937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	675	Open in IMG/M
3300031896\|Ga0318551_10632002	Not Available	619	Open in IMG/M
3300031897\|Ga0318520_10894498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300031910\|Ga0306923_10482423	Not Available	1403	Open in IMG/M
3300031910\|Ga0306923_10828232	Not Available	1019	Open in IMG/M
3300031910\|Ga0306923_11376911	Not Available	744	Open in IMG/M
3300031912\|Ga0306921_10278337	Not Available	1960	Open in IMG/M
3300031912\|Ga0306921_10297690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	1889	Open in IMG/M
3300031912\|Ga0306921_10411335	Not Available	1578	Open in IMG/M
3300031912\|Ga0306921_11093261	Not Available	894	Open in IMG/M
3300031941\|Ga0310912_10292821	Not Available	1259	Open in IMG/M
3300031941\|Ga0310912_11393627	Not Available	529	Open in IMG/M
3300031942\|Ga0310916_10794533	Not Available	797	Open in IMG/M
3300031942\|Ga0310916_11096753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300031942\|Ga0310916_11254378	Not Available	611	Open in IMG/M
3300031942\|Ga0310916_11530428	Not Available	543	Open in IMG/M
3300031945\|Ga0310913_10043068	All Organisms → cellular organisms → Bacteria	2921	Open in IMG/M
3300031945\|Ga0310913_10044084	Not Available	2890	Open in IMG/M
3300031945\|Ga0310913_10801065	Not Available	664	Open in IMG/M
3300031945\|Ga0310913_11207877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300031946\|Ga0310910_11207555	Not Available	586	Open in IMG/M
3300031947\|Ga0310909_10727878	Not Available	823	Open in IMG/M
3300031947\|Ga0310909_11207576	Not Available	611	Open in IMG/M
3300032001\|Ga0306922_10964447	Not Available	882	Open in IMG/M
3300032035\|Ga0310911_10355005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	847	Open in IMG/M
3300032035\|Ga0310911_10462388	Not Available	735	Open in IMG/M
3300032035\|Ga0310911_10725671	Not Available	575	Open in IMG/M
3300032039\|Ga0318559_10240192	Not Available	837	Open in IMG/M
3300032059\|Ga0318533_10641740	Not Available	779	Open in IMG/M
3300032066\|Ga0318514_10452957	Not Available	682	Open in IMG/M
3300032076\|Ga0306924_10094654	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	3368	Open in IMG/M
3300032076\|Ga0306924_12459971	Not Available	523	Open in IMG/M
3300032261\|Ga0306920_100024228	All Organisms → cellular organisms → Bacteria	8541	Open in IMG/M
3300032261\|Ga0306920_100967327	Not Available	1241	Open in IMG/M
3300032261\|Ga0306920_102882955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	652	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.44%
Aquatic	Environmental → Aquatic	1.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.44%
Freshwater	Environmental → Aquatic → Freshwater	0.78%
Sediment	Environmental → Aquatic → Sediment	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.03%
Loam	Environmental → Terrestrial → Soil → Loam	16.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	60.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.41%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	16.41%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026866	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 76 (SPAdes)	Environmental	Open in IMG/M
3300026908	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 77 (SPAdes)	Environmental	Open in IMG/M
3300026990	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 73 (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_100167631	3300000793	Forest Soil	VVDWFDLAHWQGILAVIVAIGTPIVAILVVAILGWPLLSWFRTLFKRKGQGE*
Ga0066395_101168093	3300004633	Tropical Forest Soil	VVDWFDLTHWQAILAAIVAIGTPIVAMLVVAILGWPLLRWFGSLFKRKGPLE*
Ga0066388_1019060453	3300005332	Tropical Forest Soil	VDWFDLDHWQAILAVIVAIGTPVVAILVVAILGWPLLRWFGSLFKRKGQRE*
Ga0066388_1032584681	3300005332	Tropical Forest Soil	VYWFDLDTLTDWGAILTAIVAIGTPIVAMLGWSKPLLRWFGSLLKR*
Ga0066388_1041275373	3300005332	Tropical Forest Soil	LTHWQAILAVIVAIGTPIVAILVVAILGWPLLRWFRTLFKRNGSA*
Ga0066388_1042820371	3300005332	Tropical Forest Soil	VVDWFDLTHWQAILAVIVAIGTPIVAILVVAILGWPLLRWFGSLFKRKGRSN*
Ga0066388_1042887061	3300005332	Tropical Forest Soil	VDWFLTHWGAILAAIVAIGTPIVAMLVVAILGWPLLRWFGSLF
Ga0066388_1052238243	3300005332	Tropical Forest Soil	VVDWFDHWQAILAAVVAIGTPIAAMLWWSKPLLRWFGSLFKRKSA*
Ga0066388_1080024161	3300005332	Tropical Forest Soil	VVDWFDLTHWQAILAAIVAIGTPIVAILGWFKPLLSWFRTLFKRKAQGGPH*
Ga0008090_156460591	3300005363	Tropical Rainforest Soil	VVDWFDLAHWQAILAVIVAIGTPIVAILVVAILGWPLLSWFRTLFKRKGQGE*
Ga0066903_1009982062	3300005764	Tropical Forest Soil	VVDWFDLTHWGAILAVIVAIGTPIVAILASSKPLLRWFGSLFKRKA*
Ga0066903_1023448022	3300005764	Tropical Forest Soil	VDVFGLDTLTYWIAMLAAIVAIGTPIVAMLGWSQPLLREHLP*
Ga0066903_1041278263	3300005764	Tropical Forest Soil	VVDWFLTHWQAILAAIVAIGTPIVAVLVWSKPLLRWLGSLFKRKDQLE*
Ga0066903_1041525982	3300005764	Tropical Forest Soil	VAVDWFENARLHWRAILAAIVAIGTPIVAILCWSKPLLRWFGSLFERKAQPLKQQESVMA
Ga0066903_1043871461	3300005764	Tropical Forest Soil	VDWFELDTLTDWGAILAAIVAIGTPIGAMLAWSKPLLHWFRSTKD*
Ga0066903_1052747011	3300005764	Tropical Forest Soil	DWFDLTHWQAILAIIVAIGTPIVAILVVAILGWPLLSWFRALFKRNGSA*
Ga0066903_1055380462	3300005764	Tropical Forest Soil	VDWFDLDHWQAILAVIVAIGTPIVAILVVAILGWPLLRWFGSLFKRKGQRE*
Ga0066903_1063764601	3300005764	Tropical Forest Soil	VDWFDLTHWQAILAAIVAIGTPIVAILVVAILGWPLLRWFGSLFKRKGPLE*
Ga0066903_1067734952	3300005764	Tropical Forest Soil	VDWFLTHWQAILAAIVAIGTPLVAILIVAILGWPLLSWFRTLFKRKGQQ*
Ga0066903_1085540411	3300005764	Tropical Forest Soil	VDWFDLTHWQAILAIIVAIGTPIVAILVVAILGWPLLSWFR
Ga0075015_1008503541	3300006102	Watersheds	VDWFDLTHRQAILAAIVTIGTPIVAVLVWAKPLLRWFGSLF
Ga0126374_100148901	3300009792	Tropical Forest Soil	VVDWFDLDHWQAILAVIVAIGTPVVAILVVAILGWPLLRWFGSLFKRKGQRE*
Ga0126374_101654713	3300009792	Tropical Forest Soil	VVDWFDLTHWQATLAAIVAIGTPIVAMLVVAILGWPLLRWFGSLFKRKGPLE*
Ga0126384_110289302	3300010046	Tropical Forest Soil	VDWFDLTHWQATLAAIVAIGTPIVGMLVVAILGWPLLRWFGSLFKRKGPLE*
Ga0126373_109037691	3300010048	Tropical Forest Soil	VVDWFDLDTLTDWTAILTAIVAIGTPIGAMLAWSKSLLRWF
Ga0126373_124443542	3300010048	Tropical Forest Soil	VDWLDLDTLTDWGAILAAIVAIGTPIGAMLAWSKSLLRWFGSLFERKAT*
Ga0126370_101026672	3300010358	Tropical Forest Soil	VDWFDHWQAILAVIVAIGTPVVAILVVAILGWPLLRWFGSLFKRKGQLE*
Ga0126376_115695532	3300010359	Tropical Forest Soil	VDWFDLEHWQAILAVIVAIGTPVVAILVVAILGWPLLRWFGSLFKRKGQRE*
Ga0126372_107441213	3300010360	Tropical Forest Soil	VVDWFDLDHWQAILAVIVAIGTPVVAILVVAILGWPLLRWFGSLFKRKGQLE*
Ga0126372_108419522	3300010360	Tropical Forest Soil	VVDWFDLTHWQAILAAIVAIGTPIVAMLVIAILGWPLLRWFGSLFKRKGPLE*
Ga0126378_134572782	3300010361	Tropical Forest Soil	DHWQAIRAVIVAIGTPVVAILVVAILGWPLLRWFGSLFKRKGQRE*
Ga0126379_100334785	3300010366	Tropical Forest Soil	VVDWLDLDTLTDWGAILAAIVAIGTPIGAMLAWSKSLLRWFGSLFERKAT*
Ga0126379_102209721	3300010366	Tropical Forest Soil	VDWFDPNTLTHWGAILAAIVAIGTPIVAILIVAILGWPLLSWFRTLFK
Ga0126379_102633233	3300010366	Tropical Forest Soil	VVDWFDLTHWQAILAAIVAIGTPIVGMLVVAILGWPLLRWFGSLFKRKGPLE*
Ga0126379_127412032	3300010366	Tropical Forest Soil	DWFDLTHWQAILAAIVAIGTPIVAMLVIAILGWPLLRWFGSLFKRKGPLE*
Ga0126381_1030402992	3300010376	Tropical Forest Soil	MVDWFDLTHWQAILAVIVAIGTPIVAILVVAILGWPLLRWFGSLFKRKGRSN*
Ga0126381_1046481412	3300010376	Tropical Forest Soil	DWFDLTHWQAILAAIVAIGTPIVAMLVVAILGWPLLRWFGSLFKRKGPLE*
Ga0126383_108397201	3300010398	Tropical Forest Soil	VVDWFLTHWQAILAAIVAIGTPIVAMLVIAILGWPLLRWFGSLFKRKGPLE*
Ga0126375_106975731	3300012948	Tropical Forest Soil	VVDWFDLDHWQAILAVIVAVGTPVVAIRVVAILGWPLLRWFGSLFKRKGQRE*
Ga0126375_112477963	3300012948	Tropical Forest Soil	VYWFDLDTLTDWGAILTAIVAIGTPIVAMLGWSKPLLRWFGSLFKRK
Ga0126369_102489391	3300012971	Tropical Forest Soil	VVDWFDLDHWQAILAVIVAIGTPIVAILVVAILGWPLLRWFGSLFKRKGRSN*
Ga0182036_100514871	3300016270	Soil	THWQAILAAIVAIGTPIVAMLVVAILGWPLLRWFGSLFKRKGPLE
Ga0182033_102082781	3300016319	Soil	VVDWFDLTHWQAILAAIVAIGTPIVAMLVVAILGWPLLRWF
Ga0182033_104353491	3300016319	Soil	VVDWFDLDHWQAILAVIVAIGTPIVAILVVAILGWPLLSWFRTLFKRNGAGWVNKP
Ga0182033_116488381	3300016319	Soil	VVDWFDLTHWQAILAAIVAIGTPFVAILWWSKPLLRWFGSFFK
Ga0182033_117713482	3300016319	Soil	VDWFVTHWATIIAAIVAIGTPIVAMLGWFKPLRRWLGSLF
Ga0182035_100679624	3300016341	Soil	VVDWFDLTHWQAILAAIVAIGTPFVAILWWSKPLLRWFGSFFKRKGQLE
Ga0182035_107388223	3300016341	Soil	LVDWFGHWQAILAVIVAIGTPIVAILVVAILGWPLL
Ga0182040_115408131	3300016387	Soil	VDWFDLDHWQAILAAIVAIGTPIVVILVWFKPLLSWWFRTLFKRN
Ga0182037_100645351	3300016404	Soil	VVDWFDLTHWQAILAAIVAIGTPIVAMLVVAILGRPLLRWFGSLFKRKGPLE
Ga0182037_102426722	3300016404	Soil	VVDWLDHWQAILAAIVAIGTPIVAILGWFKPLLRWWRSRFKKK
Ga0182037_108528102	3300016404	Soil	WSETLTHWQAILAAIVAIGTPIVAMLWWSKPLLRWFGSLFKRKSA
Ga0182037_117238582	3300016404	Soil	VDWFDHWQAILAVIVAIGTPIVAILVVAILGWPLLSWFRTLFKRNGS
Ga0182038_116689851	3300016445	Soil	LDTLTDWGAILTAIVAIGTPIVAMLGWSKPLLRWFGSLLKR
Ga0187819_100410296	3300017943	Freshwater Sediment	VDWFLTHWQAILAAIVAIGTPIVAILIVAILGCPLLSWFRTLFKR
Ga0126371_103677412	3300021560	Tropical Forest Soil	VDWLDLDTLTDWGAILAAIVAIGTPIGAMLAWSKSLLRWFGSLFERKAT
Ga0126371_106785873	3300021560	Tropical Forest Soil	VVDWFDLTHWQATLAAIVAIGTPIVGMLVVAILGWPLLRWFGSLFKRKGPLE
Ga0126371_120622723	3300021560	Tropical Forest Soil	DWFDLTHWQAILAAIVAIGTPIVAMLVVAILGWPLLRWFGSLFKRKGPLE
Ga0126371_121590342	3300021560	Tropical Forest Soil	VVDWFDLTHWQAILAIIVAIGTPIVAILVVAILGWPLLSWFRTLFKRNA
Ga0126371_125599962	3300021560	Tropical Forest Soil	LSSVYWFDLDTLTDWGAILTAIVAIGTPIVAMLGWSKPLLRWFGSLLKR
Ga0126371_128652571	3300021560	Tropical Forest Soil	SVHWFDPDTLTHWQAILAAIVAIVTPIVAVLCWSKPLLRWFRTLFKRGSA
Ga0207786_1175011	3300026866	Tropical Forest Soil	VDWFLTHWQAILAAIVAIGTPIVAILIVAILGWPLL
Ga0207787_10164441	3300026908	Tropical Forest Soil	VVDWFLTHWQAILAAIVAIGTPIVAILIVAILGWPLLSWFRTLFKRKGQQ
Ga0207824_10039364	3300026990	Tropical Forest Soil	VDWFLTHWQAILAAIVAIGTPIVAILIVAILGWPLLSWFRTL
Ga0318541_101855132	3300031545	Soil	VDWFDLTHWQAILAAIVAIGTPIVAMLVVAILGWPLLRWFGSLFKRKGPLE
Ga0318538_106555642	3300031546	Soil	VVDWLDHWQAILAAIVAIGTPIVAILGWFKPLLRWWRSRFKKKLLSFAQNDVF
Ga0318528_105659751	3300031561	Soil	FLTHWQAILAVIVAIGTPIVAILWWSKPLLRWFGSLFKRKGPLE
Ga0318573_107583061	3300031564	Soil	SLYWFDLDTLTDWGAILTAIVAIGTPIVAMLGWSKPLLRWFGSLLKR
Ga0310915_100681324	3300031573	Soil	VVDWFDLTHWQAILAAIVAIGTPIVAMLVVAILGWPLLRWFGSLFKRKGPLE
Ga0310915_107035851	3300031573	Soil	VDWFDLTHWQAILAVIVAIGTPIVAILVVAILGWPLLRWFGSLFKRKGRSN
Ga0310915_107626773	3300031573	Soil	VDWFDLTHWQAILAAVVAIGTPIVAMLGGSKPLRRWLRSLFNVG
Ga0310915_109752882	3300031573	Soil	VDWFDHWQAILAVIVAIGTPIVAILVVAILGWPLLSWF
Ga0318542_100144401	3300031668	Soil	VYWFDLDTLTDWGAILTAIVAIGTPIVAMLGWSKPLLRWFGSLLKR
Ga0318574_100513795	3300031680	Soil	VYWFDLDTLTDWGAILTAIVAIGTPIVAMLGWSKPLLRWFGSLLK
Ga0306917_104141871	3300031719	Soil	VDWFDLDHWQAILAAIVAIGTPIVVILVWFKPLLSWWFRTLFGREAQGGPH
Ga0306917_114322562	3300031719	Soil	VVDWLDHWQAILAAIVAIGTPIVAILGWFKPLLRWWRSRFKKKLLSF
Ga0318500_107445481	3300031724	Soil	VDWFDLTHWQAILAAIVAIGTPIVAMLVVAILGWPLLRWFGSLFKRKG
Ga0318501_105814901	3300031736	Soil	VVDWFDLTHWQAILAVIVAIGTPIVALLVVAILGWPLLRWFGSLFK
Ga0306918_104224051	3300031744	Soil	VVDWFDLTHWQAILAAIVAIGTPIVAMLVVAILGWPLLRWFGSLF
Ga0306918_114301562	3300031744	Soil	VYWFDLDTLTDWGAILTAIVAIGTPIVAMLGWSKPLLRW
Ga0318502_100742395	3300031747	Soil	VDWFLTHWQAILAVIVAIGTPIVAILWWSKPLLRWFGSLFKRKGQLG
Ga0318537_100536613	3300031763	Soil	VVDWFDLTHWQAILAVIVAIGTPIVAILVVAILGWPLLRWFGSLFKRKGQLE
Ga0318535_104359361	3300031764	Soil	VVDWFDLTHWQAILAAIVAIGTPIVAILIVAILGWPLLSWFRTLFKRKGQQ
Ga0318521_103752981	3300031770	Soil	VDWLDLDTFTHWGAILVAIVAIGTPIVAMLGWSKPLLRWFGSLFKRKGQLG
Ga0318548_102182091	3300031793	Soil	VDWFDLTHWQAILAAIVAIGTPIVAMLVVAILGWPLLRWFGSLFKRKGP
Ga0318557_102056741	3300031795	Soil	VDWFDLDTLTHWQAILAAIVAIGTPIVAMLVVAILGWPLLRWFGSLFKRKGPLE
Ga0318550_105933822	3300031797	Soil	WFLTHWQAILAVIVAIGTPIVAILWWSKPLLRWFGSLFKRKGQLG
Ga0318568_108262592	3300031819	Soil	VDWLDLNTLTHWQAILAAIVAIGTPIVAMLAWFKPLLRWFRSRPKSKVRQKGIT
Ga0310917_102456554	3300031833	Soil	VVDWFDLTNWQAILAVIVAIGTPIVAILVVAILGWPLLRWFGSLFKRKGRSN
Ga0310917_102728581	3300031833	Soil	GEDTLTHWQAILAAIVAIGTPIVAILGWFKPLLRWFRTLFKHEAQGGPH
Ga0318517_105627962	3300031835	Soil	LSSVDWFHLTHWQAILAVIVAIGTPIVAILWWSKPLLRWFGSLFKRKGQLG
Ga0306925_101074225	3300031890	Soil	VVDWFDLDHWQAILAAIVAIGTPIVVILVWFKPLLSWWFRTLFGREAQGGPH
Ga0306925_103717763	3300031890	Soil	VDWLNPDTLTHWQAILAVIVAIGTPIVAILGWFKPLLRWWRSRFKKKLLSFVRNDVFC
Ga0306925_114469372	3300031890	Soil	VVDWFDLTHWQAILAVIVAIGTPIVAILVVAILGWPLLRWFGSLFKRKGRSN
Ga0318551_106320021	3300031896	Soil	VDWFDHWQAILAAIVAIGTPIVAILVVATLGWPLLSWFRTLFKRNGS
Ga0318520_108944981	3300031897	Soil	VVDWLDHWQAILAAIVAIGTPIVAILGWFKPLLRWWRSRFKKKLLSFVRN
Ga0306923_104824234	3300031910	Soil	VDWFDLTHWQAILAAIVAIGTPIVAMLVVAILGWPLLRW
Ga0306923_108282323	3300031910	Soil	VDWFLTHWQAILAAIVAIGTPIVAILIVAILGWPL
Ga0306923_113769111	3300031910	Soil	VDWFDHWQAILAVIVAIGTPIVAILVVAILGWPLLSWFR
Ga0306921_102783371	3300031912	Soil	LSKLVDWFGHWQAILAVIVAIGTPIVAILVVAILGWPLLRWFGSLFKRKGRSN
Ga0306921_102976905	3300031912	Soil	VVDWFDLTHWQAILAAIVAIGTPIVAMLVVAILGWPLLRWFGSL
Ga0306921_104113352	3300031912	Soil	VVDWFDLTHWQAILAAIVAIGTPIVAILWWFKPLLRWFGSLFKRKGQLE
Ga0306921_110932613	3300031912	Soil	VVDWFDLTHWQAILAVIVAIGTPIVAILVVAILGWPLLRWFGSLFKRKGQRE
Ga0310912_102928214	3300031941	Soil	VVDWFDLTHWQAILAVIVAIGTPIVAILVVAILGWPLLRWFGSL
Ga0310912_113936272	3300031941	Soil	VVDWFDLTHWQAILAAIVAIGTPIVAMLVVAILGWPLLRWFGSLFKRKG
Ga0310916_107945331	3300031942	Soil	VDWFDLTHWQAILAVIVAIGTPIVAILVVAILGWPLLRWFGSLFKRKGQRE
Ga0310916_110967532	3300031942	Soil	VDWLNPDTLTHWQAILAVIVAIGTPIVAILGWFKPLLRWWRSRFKKKLLS
Ga0310916_112543782	3300031942	Soil	LTHWQAILAAIVAIGTPIVAMLVVAILGWPLLRWFGSLFKRKGPLE
Ga0310916_115304281	3300031942	Soil	VDWFDHWQAILAVIVAIGTPIVAILVVAILGWPLLS
Ga0310913_100430681	3300031945	Soil	IGSLPHWQAILAAIVAIGTPIVAMLGWSKPLLRWFGSLFKRKGQLE
Ga0310913_100440847	3300031945	Soil	VDWFDLDTLTHWQAILAAIVAIGTPIVVILWWFRPLVSWFGS
Ga0310913_108010652	3300031945	Soil	DWFDLDHWQAILAAIVAIGTPIVVILVWFKPLLSWWFRTLFGREAQGGPH
Ga0310913_112078771	3300031945	Soil	VDWFDLTHWQAILAVIVAIGTPIVAILVVAILGWPLLRW
Ga0310910_112075551	3300031946	Soil	VDWFDHWQAILAAIVAIGTPIVAILVVATLGWPLLSWLRTLFK
Ga0310909_107278781	3300031947	Soil	VVDWLDHWQAILAAIVAIGTPIVAILGWFKPLLRWWRSRFKKKLLSFVRNDVFCF
Ga0310909_112075761	3300031947	Soil	VVDWFDLTHWQAILAAIVAIGTPIVAILIVAILGWPL
Ga0306922_109644472	3300032001	Soil	VVDWFDLTHWQAILAAIVAIGTPIVAMLVVAILGWPLLRSFGSLFKRKGPLE
Ga0310911_103550051	3300032035	Soil	VVDWLNPDTLTHWQAILAVIVAIGTPIVAILGWFKPLLRWWRSRFKKKLLS
Ga0310911_104623882	3300032035	Soil	VDWLGEDTLTHWQAILAAIVAIGTPIVAILGWFKPLL
Ga0310911_107256711	3300032035	Soil	VVDWLDHWQAILAAIVAIGTPIVAILGWFKPLLRWWRSRFKKKLLSFAQN
Ga0318559_102401921	3300032039	Soil	THWQAILAVIVAIGTPIVAILWWSKPLLRWFGSLFKRKGQLE
Ga0318533_106417402	3300032059	Soil	VDWFDLTHWQAILAAIVAIGTPIVAMLVVAILGWPLL
Ga0318514_104529571	3300032066	Soil	VDWFDLTHWQAILAAIVAIGTPIVAMLVVAILGWPL
Ga0306924_100946541	3300032076	Soil	VVDWLDHWQAILAAIVAIGTPIVAILGWFKPLLRWWRSRF
Ga0306924_124599711	3300032076	Soil	VDWFLTHWQAILAAIVAIGTPIVAILVVAILGWPLLSWFRTLFKRNGSA
Ga0306920_1000242285	3300032261	Soil	VDWFLTHWQAILAAIVAIGTPIVAILIVAILGWPLLSWFRTLFKRKGQQ
Ga0306920_1009673274	3300032261	Soil	VVDWFDLDHWQAILAVIVAIGTPIVAILVVAILGWPLLSWFRTLFKRNGSA
Ga0306920_1028829551	3300032261	Soil	VDWLNPDTLTHWQAILAVIVAIGTPIVAILGWFKPLLRWWRSRFEKKLLS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064307

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences