Metagenome Family F064298

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064298
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	67 residues
Representative Sequence	PPPPPNASLFDRLTHRFTTRVATAGDEALDAAVHAMRTSSRPALFGTLAVVALVGVLIGRRR
Number of Associated Samples	82
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.79 %
% of genes near scaffold ends (potentially truncated)	93.75 %
% of genes from short scaffolds (< 2000 bps)	88.28 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.469 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (54.688 % of family members)
Environment Ontology (ENVO)	Unclassified (78.906 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (55.469 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.00% β-sheet: 0.00% Coil/Unstructured: 40.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF16868	NMT1_3	25.00
PF00296	Bac_luciferase	8.59
PF04909	Amidohydro_2	7.03
PF08734	GYD	3.91
PF07883	Cupin_2	1.56
PF02775	TPP_enzyme_C	1.56
PF02776	TPP_enzyme_N	0.78
PF09557	DUF2382	0.78
PF00581	Rhodanese	0.78
PF02826	2-Hacid_dh_C	0.78
PF00589	Phage_integrase	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	8.59
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	3.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.47 %
Unclassified	root	N/A	44.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.47 %
Unclassified	root	N/A	44.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.47 %
Unclassified	root	N/A	44.53 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	50.00 %
Unclassified	root	N/A	44.53 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	48.44 %
Unclassified	root	N/A	44.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.53 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.91 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.34 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.53 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.56 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.56 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1.56 %
Alphaproteobacteria bacterium MarineAlpha4_Bin2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin2	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.53 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.56 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	1.56 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	0.78 %
Lichenicola	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Lichenicola	0.78 %
Alphaproteobacteria bacterium MarineAlpha4_Bin2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin2	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.53 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.56 %
Agrobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium	0.78 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.78 %
Lichenicola cladoniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Lichenicola → Lichenicola cladoniae	0.78 %
unclassified Acidiphilium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium	0.78 %
Alphaproteobacteria bacterium MarineAlpha4_Bin2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin2	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.53 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.56 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.78 %
Agrobacterium vitis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium vitis	0.78 %
Acidiphilium sp. AL	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. AL	0.78 %
Lichenicola cladoniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Lichenicola → Lichenicola cladoniae	0.78 %
Alphaproteobacteria bacterium MarineAlpha4_Bin2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin2	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003219\|JGI26341J46601_10031113	All Organisms → cellular organisms → Bacteria → Proteobacteria	1731	Open in IMG/M
3300004080\|Ga0062385_10443860	Not Available	787	Open in IMG/M
3300004080\|Ga0062385_10443861	Not Available	787	Open in IMG/M
3300004092\|Ga0062389_102548056	Not Available	679	Open in IMG/M
3300005598\|Ga0066706_10621824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	857	Open in IMG/M
3300005764\|Ga0066903_104201836	Not Available	770	Open in IMG/M
3300005764\|Ga0066903_109031696	Not Available	504	Open in IMG/M
3300010048\|Ga0126373_10397770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1401	Open in IMG/M
3300010048\|Ga0126373_10478651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1284	Open in IMG/M
3300010358\|Ga0126370_11937730	Not Available	574	Open in IMG/M
3300010359\|Ga0126376_13210327	Not Available	506	Open in IMG/M
3300010361\|Ga0126378_10941070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	969	Open in IMG/M
3300010366\|Ga0126379_12370915	Not Available	630	Open in IMG/M
3300010376\|Ga0126381_100445803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1814	Open in IMG/M
3300010376\|Ga0126381_102328755	Not Available	769	Open in IMG/M
3300010398\|Ga0126383_13322634	Not Available	525	Open in IMG/M
3300016270\|Ga0182036_11890126	Not Available	506	Open in IMG/M
3300016294\|Ga0182041_11157910	Not Available	704	Open in IMG/M
3300016319\|Ga0182033_11612750	Not Available	587	Open in IMG/M
3300016319\|Ga0182033_12028371	Not Available	524	Open in IMG/M
3300016357\|Ga0182032_10440411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1062	Open in IMG/M
3300016357\|Ga0182032_11921882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	518	Open in IMG/M
3300016371\|Ga0182034_11769172	Not Available	544	Open in IMG/M
3300016387\|Ga0182040_11608451	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300016387\|Ga0182040_11679657	Not Available	542	Open in IMG/M
3300016404\|Ga0182037_11043914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	713	Open in IMG/M
3300016422\|Ga0182039_10490633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1059	Open in IMG/M
3300016422\|Ga0182039_10793168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	840	Open in IMG/M
3300021171\|Ga0210405_11396865	Not Available	510	Open in IMG/M
3300021439\|Ga0213879_10240148	Not Available	546	Open in IMG/M
3300021560\|Ga0126371_11306081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	859	Open in IMG/M
3300021560\|Ga0126371_13032212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300021560\|Ga0126371_13636324	Not Available	520	Open in IMG/M
3300027703\|Ga0207862_1033291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1550	Open in IMG/M
3300027729\|Ga0209248_10104966	Not Available	851	Open in IMG/M
3300027812\|Ga0209656_10243307	Not Available	854	Open in IMG/M
3300027824\|Ga0209040_10062668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2200	Open in IMG/M
3300031231\|Ga0170824_104673953	Not Available	512	Open in IMG/M
3300031545\|Ga0318541_10263205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	959	Open in IMG/M
3300031545\|Ga0318541_10727196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium MarineAlpha4_Bin2	554	Open in IMG/M
3300031561\|Ga0318528_10586700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300031561\|Ga0318528_10704692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	540	Open in IMG/M
3300031573\|Ga0310915_10006169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6699	Open in IMG/M
3300031573\|Ga0310915_10477162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	886	Open in IMG/M
3300031573\|Ga0310915_11263608	Not Available	509	Open in IMG/M
3300031668\|Ga0318542_10184168	Not Available	1049	Open in IMG/M
3300031668\|Ga0318542_10358631	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300031668\|Ga0318542_10737338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300031679\|Ga0318561_10042690	All Organisms → cellular organisms → Bacteria → Proteobacteria	2243	Open in IMG/M
3300031713\|Ga0318496_10227934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. AL	1026	Open in IMG/M
3300031719\|Ga0306917_10172365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1621	Open in IMG/M
3300031719\|Ga0306917_10762677	Not Available	759	Open in IMG/M
3300031724\|Ga0318500_10576198	Not Available	569	Open in IMG/M
3300031744\|Ga0306918_10235087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1394	Open in IMG/M
3300031747\|Ga0318502_10148730	Not Available	1335	Open in IMG/M
3300031751\|Ga0318494_10393387	Not Available	804	Open in IMG/M
3300031764\|Ga0318535_10047404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1783	Open in IMG/M
3300031764\|Ga0318535_10506422	Not Available	536	Open in IMG/M
3300031768\|Ga0318509_10342350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	837	Open in IMG/M
3300031768\|Ga0318509_10443171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium vitis	726	Open in IMG/M
3300031771\|Ga0318546_11272720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300031777\|Ga0318543_10026198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2228	Open in IMG/M
3300031777\|Ga0318543_10415213	Not Available	603	Open in IMG/M
3300031780\|Ga0318508_1136686	Not Available	692	Open in IMG/M
3300031781\|Ga0318547_10201907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1187	Open in IMG/M
3300031781\|Ga0318547_10905931	Not Available	550	Open in IMG/M
3300031782\|Ga0318552_10628327	Not Available	548	Open in IMG/M
3300031792\|Ga0318529_10176430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	988	Open in IMG/M
3300031792\|Ga0318529_10276397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782	Open in IMG/M
3300031793\|Ga0318548_10011662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	3476	Open in IMG/M
3300031793\|Ga0318548_10060254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1756	Open in IMG/M
3300031793\|Ga0318548_10572265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300031795\|Ga0318557_10605472	Not Available	503	Open in IMG/M
3300031797\|Ga0318550_10486381	Not Available	596	Open in IMG/M
3300031797\|Ga0318550_10567189	Not Available	546	Open in IMG/M
3300031833\|Ga0310917_10257337	Not Available	1176	Open in IMG/M
3300031879\|Ga0306919_10307987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1203	Open in IMG/M
3300031879\|Ga0306919_11067141	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300031880\|Ga0318544_10177630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	820	Open in IMG/M
3300031894\|Ga0318522_10131953	Not Available	937	Open in IMG/M
3300031894\|Ga0318522_10318193	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300031896\|Ga0318551_10706043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300031897\|Ga0318520_10556216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	711	Open in IMG/M
3300031897\|Ga0318520_10788580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	596	Open in IMG/M
3300031910\|Ga0306923_10218366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2181	Open in IMG/M
3300031910\|Ga0306923_12163859	Not Available	559	Open in IMG/M
3300031912\|Ga0306921_10722943	Not Available	1143	Open in IMG/M
3300031912\|Ga0306921_11442205	Not Available	755	Open in IMG/M
3300031912\|Ga0306921_11787666	Not Available	661	Open in IMG/M
3300031941\|Ga0310912_10128738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1893	Open in IMG/M
3300031942\|Ga0310916_10756052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	820	Open in IMG/M
3300031942\|Ga0310916_10953775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	717	Open in IMG/M
3300031945\|Ga0310913_10329130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1080	Open in IMG/M
3300031945\|Ga0310913_10462624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	901	Open in IMG/M
3300031946\|Ga0310910_11213365	Not Available	585	Open in IMG/M
3300031947\|Ga0310909_10086771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2492	Open in IMG/M
3300031947\|Ga0310909_10288116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1375	Open in IMG/M
3300031947\|Ga0310909_11402284	Not Available	559	Open in IMG/M
3300031949\|Ga0214473_11998215	Not Available	566	Open in IMG/M
3300031954\|Ga0306926_10007971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11537	Open in IMG/M
3300031954\|Ga0306926_11503924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	777	Open in IMG/M
3300031954\|Ga0306926_12718406	Not Available	537	Open in IMG/M
3300032001\|Ga0306922_10147619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2513	Open in IMG/M
3300032001\|Ga0306922_10822394	Not Available	970	Open in IMG/M
3300032010\|Ga0318569_10162334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1031	Open in IMG/M
3300032035\|Ga0310911_10167820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1240	Open in IMG/M
3300032035\|Ga0310911_10820185	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300032039\|Ga0318559_10006845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	3917	Open in IMG/M
3300032043\|Ga0318556_10012439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3612	Open in IMG/M
3300032043\|Ga0318556_10611680	Not Available	568	Open in IMG/M
3300032051\|Ga0318532_10009498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Lichenicola → Lichenicola cladoniae	2948	Open in IMG/M
3300032054\|Ga0318570_10287068	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300032055\|Ga0318575_10054821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1838	Open in IMG/M
3300032059\|Ga0318533_10001113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12869	Open in IMG/M
3300032059\|Ga0318533_10857803	Not Available	666	Open in IMG/M
3300032059\|Ga0318533_11063936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	593	Open in IMG/M
3300032064\|Ga0318510_10197642	Not Available	811	Open in IMG/M
3300032076\|Ga0306924_10293456	Not Available	1866	Open in IMG/M
3300032076\|Ga0306924_10484098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1411	Open in IMG/M
3300032076\|Ga0306924_10919005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	967	Open in IMG/M
3300032091\|Ga0318577_10183733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	999	Open in IMG/M
3300032094\|Ga0318540_10440869	Not Available	629	Open in IMG/M
3300032261\|Ga0306920_102478673	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300033289\|Ga0310914_10746817	Not Available	875	Open in IMG/M
3300033289\|Ga0310914_11773545	Not Available	521	Open in IMG/M
3300033290\|Ga0318519_10433835	Not Available	785	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.53%
Aquatic	Environmental → Aquatic	5.47%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.53%
Freshwater	Environmental → Aquatic → Freshwater	5.47%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.19%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.47%
Loam	Environmental → Terrestrial → Soil → Loam	2.34%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	80.47%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.16%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.34%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.78%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	54.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.38%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.34%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26341J46601_100311133	3300003219	Bog Forest Soil	LSAALPPLHPNASLFDVLTHRFSTRVAGASDEAIDAAVHVMRTGSKSALFGTLAVVALVGVLLGRRYR*
Ga0062385_104438602	3300004080	Bog Forest Soil	LHPNASLFDVLTHRFSTRVAGAGDEAIDTAVHVMRTGSKSALFGTLAVVALVGILLGRRHR*
Ga0062385_104438612	3300004080	Bog Forest Soil	LHPNASLFDVLTHRFSTRVAGASDEAIDAAVHVMRTGSKSALFGTLTVVALVGVLLGRRYR*
Ga0062389_1025480561	3300004092	Bog Forest Soil	MATLLSAALPSLLPNASFFDVLTHRFSTRVVGASDEAVDAAVNVIRTGSKSALFGTLAVVALVGVLLGRRRR*
Ga0066706_106218242	3300005598	Soil	DVLAHRFSTRVAAAGDEAIDAAVDAMRTSSRSALFGTLAVVALVGVLIGRRR*
Ga0066903_1042018361	3300005764	Tropical Forest Soil	SFFDHLTRRFTTRVAAASDEAIDAAVHVMRTSSRSALFGTLAVVTLVGVLIGRHRRR*
Ga0066903_1090316962	3300005764	Tropical Forest Soil	GSAALSAAVPSLPPNASVVDVLTHRFSTRAAGAGDEAVDAAAHLLRTGSRSVLFGTLAVVALVGVVIGRRR*
Ga0126373_103977701	3300010048	Tropical Forest Soil	MFDVLAHRFSTRVAAAGDEAVDAAVSIMRTGSRSTIFGTLAVAALVGVLLGRHR*
Ga0126373_104786512	3300010048	Tropical Forest Soil	SLPPNASVVDVLTHRFSTRAAGAGDEAVDAAAHLLRTGSRSVLFGTLAVVALVGVVIGRRR*
Ga0126370_119377301	3300010358	Tropical Forest Soil	LAPEYRAPAASPPSASAPALLSAILPPPAPDASFFDHLTRRFTRRVAAASDEAIDAAVHVMRTSSRSALFGTLAVVTLVGVLIGRHRRR*
Ga0126376_132103271	3300010359	Tropical Forest Soil	PPSPSAPALLSAMLPPPAPDASFFDHLTRRFTTRVAAASDEAIDAAVHVMRTSSRSALFGTLAVVTLVGVLIGRRRR*
Ga0126378_109410701	3300010361	Tropical Forest Soil	AVPSLPPNASVVDVLTHRFSTRAAGAGDEAVDAAAHLLRTGSRSVLFGTLAVVALVGVVIGRRR*
Ga0126379_123709152	3300010366	Tropical Forest Soil	HRLTTRVAAAGDDALDMAIHVMRTSSRPALFSTLAVMALVGVLIGRRR*
Ga0126381_1004458031	3300010376	Tropical Forest Soil	ALSAAVPSLPPNASVVDVLTHRFSTRAAGAGDEAVDAAAHLLRTGSRSVLFGTLAVVALVGVVIGRRR*
Ga0126381_1023287552	3300010376	Tropical Forest Soil	PPPPPNASFFDHLTHRVTTRVATASDEALDTAVHVMRTSSRPALFGTLAVVTLIGVLIGRHRRS*
Ga0126383_133226341	3300010398	Tropical Forest Soil	HLTHRFTTRVATASDEALDAAVHAMRTSSRPALFGTLAVVTLVGALIGRRRRR*
Ga0182036_118901261	3300016270	Soil	PAPQPMSTLLTAALPSLPPNASLFDVLTHRFSTRVVGASDEAIDAAVHVMRTGSKSTLFGTLAVVALVGVLLGRRRR
Ga0182041_111579101	3300016294	Soil	PPANASFFDRLTHRFTTRVATAGDEARDAAVQSMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0182033_116127501	3300016319	Soil	QPVAAPLYLNPAASPAPSASSPVLVSAALPPLPPNASLFDYVTHRFSTRVAAASDEALDAAVQAMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0182033_120283712	3300016319	Soil	LPPNAPLLDVLSHRISTRVAGASDEAIDAAAQIMRTGSKSALFGTLAVVALLGIFLGRRR
Ga0182032_104404112	3300016357	Soil	LPSPPSNASAFDILTHRVSTRVAGAGDEAIDAAAHLVRTGSRSALFGTLAVVALVGVLLGRRR
Ga0182032_119218822	3300016357	Soil	PRPPSALLAAALPSLPSNASVVDVLKHRVSTHVAGAGDEAVDAAVHLMRTGSRSVLFGTLAVVALVGVLLGRRR
Ga0182034_117691721	3300016371	Soil	DVLTHRFSTRVAGAGDEATDAAVHIMRTGSKSALFGTMAAVALVGVLLGRRHR
Ga0182040_116084511	3300016387	Soil	ASPAPSASSPVLVSAALPPLPPNASLFDYVTHRFSTRVAAASDEALDAAVQAMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0182040_116796572	3300016387	Soil	FDHLTHRFTTRVATASDEALDAAVHVMRNSSRSALFGTLAVVALVGVLIGRRR
Ga0182037_110439142	3300016404	Soil	SAALPSLPSNASAFDVLTHRVSTRVAGAGDEAIDAAAHLMRTGSRSVLFGTLAVVALAGVLIGRRR
Ga0182039_104885692	3300016422	Soil	FAVIGLVTALLAALMFALAFLRRKRGPAPAAVYRAPAASPPAAPILLSVLPPPPANASVFDHLTHRFTTRVATAGDEALDAAVQSMRTSSRLALFGTLAIVALVGVLIGRRR
Ga0182039_104906332	3300016422	Soil	APPVPLFRPVPAALSAALPSLTWNESGFDVLTHRFSTRVAGAGDEAIDAAVHLMRTGSRSVLFGTLAVVALAGVMLGRRR
Ga0182039_107931682	3300016422	Soil	FDVLTHRFSTRVAGAGDEATDAAVHIMRTGSKSALFGTLAVVALLGIFLGRRR
Ga0210405_113968652	3300021171	Soil	PPPPNASFFDHLTHRFTTRMATASDDAIDAAVHVMRTSSRSTLFGTLAVVTLVGVLIGRRRRS
Ga0213879_102401481	3300021439	Bulk Soil	QALPALPPNATYMDVLTHRFSTRVAGAGGEAVDAAAHLMRTGSRSVLFGTLAVVALLGVVIGRRR
Ga0126371_113060812	3300021560	Tropical Forest Soil	FDVLAHRFSTRVAAAGDEAVDAAVSIMRTGSRSTIFGTLAVAALVGVLLGRHR
Ga0126371_130322122	3300021560	Tropical Forest Soil	APIVPSPALSPLPPNAPLLDILSYRISTRVAGASDEAIDAVAHIMRTGSKSALFGTLAVVALLGIFLGRRR
Ga0126371_136363242	3300021560	Tropical Forest Soil	YMDVLTHRFSTRVAGAGDEAVDAAAHLLRTGSRSVLFGTLAVVALLGVMIGRRR
Ga0207862_10332913	3300027703	Tropical Forest Soil	PPPANASFFDRLTHRFTTRVATAGDEALDAAVHAMRTSSRPALFGTLAVVTLVGVLIGRR
Ga0209248_101049662	3300027729	Bog Forest Soil	LSAALPPLPSNASVFDVLTHRFSTRVAGAGDEAIDAAVHVMRTGSKSALFGTLTVVALVGVLLGRRYR
Ga0209656_102433072	3300027812	Bog Forest Soil	LPVALSAALPPLHPNASLFDVLTHRFSTRVAGASDEAIDAAVHVMRTGSKSALFGTLAVVALVGVLLGRRYR
Ga0209040_100626681	3300027824	Bog Forest Soil	LPVALSAALPPLHPNASLFDVLTHRFSTRVAGAGDEAIDTAVHVMRTGSKSALFGTLAVVALVGILLGRRHR
Ga0170824_1046739531	3300031231	Forest Soil	ASFFDHLTHRFTTRVATAGDEALDTAVHVMRTSSRPVLFGTLAVVGLIGVLIGRRR
Ga0318541_102632051	3300031545	Soil	ILTHRVSTRVAGAGDEAIDAAAHLVRTGSRSALFGTLAVVALVGVLLGRRR
Ga0318541_107271962	3300031545	Soil	ILMSVLPPPPANASFIDHLTHRFTTRAATAGDEALDAAVHAMRTSSRPALFGTLAVVTLVGVLIGRRRRSQSPA
Ga0318528_105867001	3300031561	Soil	PGSAALSAVLPSLPSNASVFDVLTHRVSTRVAGAGDEAIDAAAHLVRTGSRSVLFGTLAVVALAGVLIGRRR
Ga0318528_107046921	3300031561	Soil	DVLTRRFSTRLAGASDEAIDAAVHLMRTGSRSVLFGTLAVVAPAGVMLGRRR
Ga0310915_100061693	3300031573	Soil	MSTLLTAALPSLPPNASLFDVLTHRFSTRVVGASDEAIDAAVHVMRTGSKSTLFGTLAVVALVGVLLGRRRR
Ga0310915_104771621	3300031573	Soil	ALPSLPSNASAFDVLTHRVSTRVAGAGDEAIDAAAHLMRTGSRSVLFGTLAVVALAGVLIGRRR
Ga0310915_112636081	3300031573	Soil	SVALSAALPPLPSNASLFDVLTHRFSTRVAGAGDEAIDAAVHIMRTGSKPALFGTLAAVALVGVLLGRRHR
Ga0318542_101841682	3300031668	Soil	ILMSVLSPPPANASFFDHLTHRLTTRVATAGDEALDAAVHAMRTTSRPALFGTLAVVALVGVLIGRRR
Ga0318542_103586312	3300031668	Soil	NPAASPAPSASSPVLLSAALPPLPPNASLFDHLTHRFSTRVAAASDEALDAAIHAMRTSSRPALFGTLAAVALVGVLIGRRR
Ga0318542_107373381	3300031668	Soil	SNASALDVLTHRVSTRVAGAGDEAIDAAVHLMRTGSRSVLFGTLAVVALVGVLLGRRR
Ga0318561_100426904	3300031679	Soil	SSPVLVSAALPPLPPNASLFDYVTHRFSTRVAAASDEALDAAVQAMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0318496_102279342	3300031713	Soil	AVYSAPAASPPAAPLLMSVLPPPPANASFFDRLTHRFTTRVATAGDEALNAAVHAMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0306917_101723651	3300031719	Soil	GSAALSAAVPSPPPNASVADLLTHRVSTRVAGAGDEAIDAAVHLMRNGSRSVLFGTLAVVALVGVVIGRRR
Ga0306917_107626771	3300031719	Soil	APLLMSALPPPPANASFFDRLTHRFTTRVATAGDEALDAAVHAMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0318500_105761981	3300031724	Soil	SFIDHLTHRFTTRAATAGDEALDAAVHAMRTSSRPALFGTLAVVTLVGVLIGRRRRSQSP
Ga0306918_102350871	3300031744	Soil	VDVLQHRVSTRVAGAGDEAIDAAVHLMRTGSRSVLFGTLAVVALVGVLLGRRR
Ga0318502_101487302	3300031747	Soil	PVPAPLYLNPAASPAPSASSPVLVSAALPPLPPNASLFDHLTHRFSTRVAAASDEALDAAVQAMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0318494_103933871	3300031751	Soil	SLFDRLTHRFTTRVATAGDEALDTAVHAMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0318535_100474041	3300031764	Soil	PANASFFDHLTHRLTTRVATAGDEALDAAVHAMRTTSRPALFGTLAVVALVGVLIGRRR
Ga0318535_105064221	3300031764	Soil	FDYVTHRFSTRVAAASDEALDAAVQAMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0318509_103423502	3300031768	Soil	PSPPSNASVFDVLTHRVSTRVAGAGDEAIDAAAHLVRTGPRSVLFGTLAVIALVGVLIGRRR
Ga0318509_104431712	3300031768	Soil	SVLPPPPANASFFDRLTHRFTTRVATAGDEALDAAVQSMRTSSRLALFGTLAIVALVGVLIGRRR
Ga0318521_106928001	3300031770	Soil	ADRHPAAIPESSVPPPRTGSAVLSAALPPLRSNASALDVLTHRVSTRVAGAGDEAIDAAVHLMRTGSRSVLFGTLAVVALVGVLLGRRR
Ga0318546_112727202	3300031771	Soil	NASAFDVLTHRVSTRVAGAGDEAIDAAAHLMRTGSRSVLFGTLAVVALAGVLIGRRR
Ga0318543_100261983	3300031777	Soil	PPPPANASFFDHLTHRFTTRVATAGDEALDAAVHAMRTTSRPALFGTLAVVALVGVLIGRRR
Ga0318543_104152131	3300031777	Soil	PANASFFDRLTHRFTTRVATAGDEALDAAVHAMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0318508_11366861	3300031780	Soil	VLPPPPPNASLFDRLTHRFTTRVATAGDEALDAAVHAMRTTSRPALFGTLAVVALVGVLIGRRR
Ga0318547_102019071	3300031781	Soil	SLFDHLTHRFSTRVAAASDEALDAAIHAMRTSSRPALFGTLAAVALVGVLIGRRR
Ga0318547_109059311	3300031781	Soil	APILMSVLPPPPANASFIDHLTHRFTTRAATAGDEALDAAVHAMRTSSRPALFGTLAVVTLVGVLIGRRRRSQSPA
Ga0318552_106283271	3300031782	Soil	LLMSVLPPPPANASFFDRLTHRFTTRVATAGDEALDAAVQSMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0318529_101764302	3300031792	Soil	ASSPVLVSAALPPLPPNASLFDHLTHRFSTRVAAASDEALDAAIHAMRTSSRPALFGTLAAVALVGVLIGRRR
Ga0318529_102763972	3300031792	Soil	LPEAAPIVPSTALSPLPPNAPLLDVLSHRISTRVAGASDEAIDAAAQIMRTGSKSALFGTLAVVALLGIFLGRRR
Ga0318548_100116621	3300031793	Soil	LSPVLVSAALPPLPPNASLFDHLTHRFSTRVAAASDEALDAAIHAMRTSSRPALFGTLAAVALVGVLIGRRR
Ga0318548_100602541	3300031793	Soil	LSAAVPSPPPNASVADLLTHRVSTRVAGAGDEAIDAAVHLMRNGSRSVLFGTLAVVALVGVVIGRRR
Ga0318548_105722651	3300031793	Soil	LDILSHRISTRVVGASDEAIDAAAHIMRTGSKSALFGTLAVVALLGIFLGRRR
Ga0318557_106054722	3300031795	Soil	VLTHRFSTRVAGAGDEAIDAAVHLMRTGSRSVLFGTLAVVAPAGVMLGRRR
Ga0318550_104863811	3300031797	Soil	ASFFDALTHRFSTRVAAAGDEAIDAAVHAMRTSSRPALFGTLAAVVLVGVLIGRRR
Ga0318550_105671891	3300031797	Soil	AASPPAAPLLMSVLPPPPANASFFDRLTHRFTTRVATAGDEALDAAVQSMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0310917_102573372	3300031833	Soil	DHLTRRFTTRVAAASDEAIDAAVHVMRTSSRSALFGTLAVVTLVGVLIGRHRRR
Ga0306919_103079872	3300031879	Soil	TGSAVLSAALPPLRSNASALDVLTHRVSTRVAGAGDEAIDAAVHLMRTGSRSVLFGTLAVVALVGVLLGRRR
Ga0306919_110671412	3300031879	Soil	FVLAYRRARRQPVAAPLYLNPAASPAPSASSPVLVSAVLPPLPPNASLFDRLTHRFTTRVATAGDEALDAAVQAMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0318544_101776301	3300031880	Soil	VSAVLSAALPSPPSNASAFDILTHRVSTRVAGAGDEAIDAAAHLVRTGSRSALFGTLAVVALVGVLLGRRR
Ga0318522_101319531	3300031894	Soil	PVYRAPTASPLLSPVAPLLMSVLPPPPPNASLFDRLTHRFTTRVATAGDEALDAAVHVMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0318522_103181932	3300031894	Soil	LVSAALPPLPPNASLFDYVTHRFSTRVAAASDEALDAAVQAMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0318551_107060432	3300031896	Soil	SPPVPPSRPVSAVLSAALPSPPSNASAFDILTHRVSTRVAGAGDEAIDAAAHLVRTGSRSALFGTLAVVALVGVLLGRRR
Ga0318520_105562161	3300031897	Soil	ALLAAALPSLPSNASVVDVLKHRVSTHVAGAGDEAVDAAVHLMRTGSRSVLFGTLAVVALVGVLLGRRR
Ga0318520_107885802	3300031897	Soil	PRPAPAVLSAALPSLPSNASVVDVLQHRVSTRVAGAGDEAIDAAVHLMRTGSRSVLFGTLAVVALVGVLLGRRR
Ga0306923_102183661	3300031910	Soil	DVLSHRISTRVAGASDEAIDAAAQIMRTGSKSALFGTLAVVALLGIFLGRRR
Ga0306923_121638592	3300031910	Soil	YRAPAASPPSPLAPALLSAILPPPAPDASFVDHLTRRFTTRVAAASDEAIDAAVHVMRTSSRSALFGTLAVVTLVGVLIGRHRRR
Ga0306921_107229432	3300031912	Soil	APDASFVDHLTRRFTTRVAAASDEAIDAAVHVMRTSSRSALFGTLAVVTLVGVLIGRHRR
Ga0306921_114422051	3300031912	Soil	AASPPAAASSPVLLSAALPPLPPRASFFDRLTHRFTTRVAAAGDEALDAAVHAMRTSSRPALFGTLAIVALVGVLIGRRR
Ga0306921_117876661	3300031912	Soil	ASPPAAPLLMSVLPPPPANASFFDRLTHRFTTRVATAGDEALDAAVHAMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0310912_101287383	3300031941	Soil	NASALDVLTHRVSTRVAGAGDEAIDAAVHLMRTGSRSVLFGTLAVVALVGVLLGRRR
Ga0310916_107560521	3300031942	Soil	LPSLPPNASLFDVLTHRFSTRVVGASDEAIDAAVHVMRTGSKSTLFGTLAVVALVGVLLGRRRR
Ga0310916_109537751	3300031942	Soil	RPVSAVLSAALPSPPSNASAFDILTHRVSTRVAGAGDEAIDAAAHLVRTGSRSALFGTLAVVALVGVLLGRRR
Ga0310913_103291302	3300031945	Soil	VSDVLTRRFSTRLAGASDEAIDAAVHLMRTGSRSVLFGTLAVVAPAGVMLGRRR
Ga0310913_104626242	3300031945	Soil	LDLLTHRFSTRVAGAGDEVIDAAVHIIRTGSKSALFGTLTVVLLVGVLLGRRR
Ga0310910_112133651	3300031946	Soil	LPPPAPDASFVDHLTRRFTTRVAAASDEAIDAAVHVMRTSSRSALFGTLAVVTLVGVLIGRHRRR
Ga0310909_100867715	3300031947	Soil	VLVSAALPPLPPNASLFDHLTHRFSTRVAAASDEALDAAVQAMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0310909_102881162	3300031947	Soil	ATLLDLLTHRFSTRVAGAGDEAIDAAVHIIRTGSKSALFGTLTVMLLVGVLLGRRR
Ga0310909_114022841	3300031947	Soil	SVALSAAFPPLPSNASLFDVLTHRFSTRVAGAGDEAIDAAVHIMRTGSKPALFGTLAAVALVGVLLGRRHR
Ga0214473_119982151	3300031949	Soil	TRAAAASDEAIDAAAEVLRTGSREAVLGTLAIAALVGVLVGRRR
Ga0306926_100079719	3300031954	Soil	MSVLPPPPANASFFDHLTHRFTTRVATAGDEALDAAVHAMRTTSRPALFGTLAVVALVGVLIGRRR
Ga0306926_115039242	3300031954	Soil	ALPPPPLNEPLFDVLTHRFSARLAGASDDAIDVAAHVMRTGSKSALFGTLAVVALFGVMLGRRHQ
Ga0306926_127184062	3300031954	Soil	PNAAFLDVLRHRFSTRVAGAGDETLDAAVHFMRTGSRSVLFGTLAVAALVGVMIGRRR
Ga0306922_101476191	3300032001	Soil	LPPNASLFDRLTHRFTTRVATAGDEALDAAVQAMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0306922_108223941	3300032001	Soil	LRPNASLFDVLTHRFSTRVAGAGDEATDAAVHIMRTGSKSALFGTMAAVALVGVLLGRRH
Ga0318569_101623341	3300032010	Soil	RRQPVAAPLYLNPAASPAPSASSPVLVSAALPPLPPNASLFDHLTHRFSTRVAAASDEALDAAIHAMRTSSRPALFGTLAAVALVGVLIGRRR
Ga0310911_101678201	3300032035	Soil	LSAALPSLPSNASAFDVLTHRVSTRVAGAGDEAIDAAAHLMRTGSRSVLFGTLAVVALAGVLIGRRR
Ga0310911_108201852	3300032035	Soil	VPAPLYLNPAASPAPSASSPVLVSAALPPLPPNASLFDHLTHRFSTRVAAASDEALDAAIHAMRTSSRPALFGTLAAVALVGVLIGRRR
Ga0318559_100068455	3300032039	Soil	APLYLNPAASPAPSASSPVLVSAALPPLPPNASLFDHLTHRFSTRVAAASDEALDAAIHAMRTSSRPALFGTLAAVALVGVLIGRRR
Ga0318556_100124391	3300032043	Soil	PILMSVLPPPPANASFFDHLTHRLTTRVATAGDEALDAAVHAMRTTSRPALFGTLAVVAVVGVLIGRRR
Ga0318556_106116801	3300032043	Soil	TAPLLMSVLPPPPANASFFDRLTHRFTTRVATAGDEALDAAVHAMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0318532_100094984	3300032051	Soil	AAVPSLPPNASVVDVLTHRVSTRVAGAGDETIDAAVHLMRNGSRSVLFGTLAVVALVGVVIGRRR
Ga0318570_102870682	3300032054	Soil	PLLMSVLPPPPPNASLFDRLTHRFTTRVATAGDEALDAAVHAMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0318575_100548211	3300032055	Soil	ELSASQPWPVSAALSAAVPSLPPNASVVDVLTHRVSTRVAGAGDETIDAAVHLMRNGSRSVLFGTLAVVALVGVVIGRRR
Ga0318533_100011137	3300032059	Soil	MSTLLTAALPSLPPNASLFDVVTHRFSTRVVGASDEAIDAAVHVMRTGSKSTLFGTLAVVALVGVLLGRRRR
Ga0318533_108578031	3300032059	Soil	PQPMSVALSAALPPLPPNAPLFDVLTHRFSTRVAGAGDEAIDAAVHIMRTGSKPALFGTLAAVALVGVLLGRRHR
Ga0318533_110639361	3300032059	Soil	PIVPSPALSPLPPNSPFLDILSHRISTRVVGASDEAIDAAAQIMRTGSKSALFGTLAVVALLGIFLGRRR
Ga0318510_101976421	3300032064	Soil	PPPPPNASLFDRLTHRFTTRVATAGDEALDAAVHAMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0306924_102934561	3300032076	Soil	LPPLPPNASLFDHLTHRFSTRVAAASDEALDAAVQAMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0306924_104840981	3300032076	Soil	PPSRPVSAVLSAALPSPPSNASAFDILTHRVSTRVAGAGDEAIDAAAHLVRTGSRSALFGTLAVVALVGVLLGRRR
Ga0306924_109190051	3300032076	Soil	AAPIVPSPALSPLPPNSPFLDILSHRISTRVVGASDEAIDAAAHIMRTGSKSALFGTLAVVALLGIFLGRRR
Ga0318577_101837332	3300032091	Soil	SNASAFDILTHRVSTRVAGAGDEAIDAAAHLVRTGSRPVLFGTLAVVALVGVLLGRRR
Ga0318540_104408692	3300032094	Soil	SAALPPLRPNASLFDVLTHRFSTRVAGAGDEATDAAVHIMRTGSKSALFGTMAAVALVGVLLGRRHR
Ga0306920_1024786731	3300032261	Soil	VLPPLPPNASLFDHLTHRFTTRVSTAGDEALDAAVQAMRTSSRPVLFGTLAVVALVGVLIGRRR
Ga0310914_107468172	3300033289	Soil	PPPNASLFDRLTHRFTTRVATAGDEALDAAVHAMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0310914_117735452	3300033289	Soil	RAPAASPPAAPLLMSVLPPPPANASFFDRLTHRFTTRVATAGDEALDAAVQSMRTSSRPALFGTLAVVALVGVLIGRRR
Ga0318519_104338352	3300033290	Soil	FHRLTHRFTTRVATAGDEALDAAVQSMRTSSRPALFGTLAVVALVGVLIGRRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064298

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences