Basic Information | |
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Family ID | F064227 |
Family Type | Metagenome |
Number of Sequences | 129 |
Average Sequence Length | 47 residues |
Representative Sequence | VDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDEQVHGDTETD |
Number of Associated Samples | 112 |
Number of Associated Scaffolds | 129 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 97.67 % |
% of genes from short scaffolds (< 2000 bps) | 90.70 % |
Associated GOLD sequencing projects | 98 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (46.512 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (27.132 % of family members) |
Environment Ontology (ENVO) | Unclassified (72.868 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (87.597 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 66.67% β-sheet: 0.00% Coil/Unstructured: 33.33% | Feature Viewer |
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Pfam ID | Name | % Frequency in 129 Family Scaffolds |
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PF00166 | Cpn10 | 99.22 |
COG ID | Name | Functional Category | % Frequency in 129 Family Scaffolds |
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COG0234 | Co-chaperonin GroES (HSP10) | Posttranslational modification, protein turnover, chaperones [O] | 99.22 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 53.49 % |
Unclassified | root | N/A | 46.51 % |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 27.13% |
Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 13.95% |
Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 10.85% |
Salt Marsh | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh | 9.30% |
Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 8.53% |
Microbial Mat | Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat | 3.88% |
Estuarine Water | Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water | 3.88% |
Freshwater To Marine Saline Gradient | Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient | 2.33% |
Pelagic Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine | 2.33% |
Marine | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine | 1.55% |
Seawater | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater | 1.55% |
Seawater | Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater | 1.55% |
Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine | 1.55% |
Water | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water | 1.55% |
Saline Water And Sediment | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment | 1.55% |
Sylissa Sp. (Marine Sponge) | Host-Associated → Porifera → Unclassified → Unclassified → Unclassified → Sylissa Sp. (Marine Sponge) | 1.55% |
Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment | 0.78% |
Freshwater | Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater | 0.78% |
Deep Ocean | Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean | 0.78% |
Marine Estuarine | Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine | 0.78% |
Pelagic Marine | Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine | 0.78% |
Estuarine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine | 0.78% |
Marine Harbor | Environmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor | 0.78% |
Pond Water | Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water | 0.78% |
Hypersaline Lake Sediment | Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment | 0.78% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
2236876001 | Marine microbial communities from Columbia River, CM, sample from CR-7km from mouth, GS312-0p1-CR7-chlmax | Environmental | Open in IMG/M |
3300000101 | Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010 | Environmental | Open in IMG/M |
3300000117 | Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010 | Environmental | Open in IMG/M |
3300000238 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 36 08/11/09 100m | Environmental | Open in IMG/M |
3300001419 | Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m) | Environmental | Open in IMG/M |
3300001450 | Marine viral communities from the Pacific Ocean - LP-53 | Environmental | Open in IMG/M |
3300001589 | Marine viral communities from the Pacific Ocean - LP-40 | Environmental | Open in IMG/M |
3300001934 | Estuary microbial communities from Chesapeake Bay, Maryland, USA - MOVE858 | Environmental | Open in IMG/M |
3300003474 | Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 4 | Environmental | Open in IMG/M |
3300005346 | Saline sediment microbial community from Etoliko Lagoon, Greece | Environmental | Open in IMG/M |
3300006026 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA | Environmental | Open in IMG/M |
3300006027 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA | Environmental | Open in IMG/M |
3300006029 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA | Environmental | Open in IMG/M |
3300006637 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA | Environmental | Open in IMG/M |
3300006735 | Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG | Environmental | Open in IMG/M |
3300006737 | Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG | Environmental | Open in IMG/M |
3300006749 | Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG | Environmental | Open in IMG/M |
3300006752 | Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG | Environmental | Open in IMG/M |
3300006793 | Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG | Environmental | Open in IMG/M |
3300006802 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 | Environmental | Open in IMG/M |
3300006810 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 | Environmental | Open in IMG/M |
3300006916 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 | Environmental | Open in IMG/M |
3300006919 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 | Environmental | Open in IMG/M |
3300006920 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 | Environmental | Open in IMG/M |
3300006921 | Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG | Environmental | Open in IMG/M |
3300006922 | Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG | Environmental | Open in IMG/M |
3300006924 | Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG | Environmental | Open in IMG/M |
3300006925 | Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG | Environmental | Open in IMG/M |
3300006928 | Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG | Environmental | Open in IMG/M |
3300006929 | Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG | Environmental | Open in IMG/M |
3300007148 | Marine sponge Stylissa sp. associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - st43is | Host-Associated | Open in IMG/M |
3300007963 | Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2) | Environmental | Open in IMG/M |
3300017697 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2) | Environmental | Open in IMG/M |
3300017708 | Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaG | Environmental | Open in IMG/M |
3300017720 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 | Environmental | Open in IMG/M |
3300017727 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20 | Environmental | Open in IMG/M |
3300017742 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21 | Environmental | Open in IMG/M |
3300017743 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17 | Environmental | Open in IMG/M |
3300017746 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29 | Environmental | Open in IMG/M |
3300017750 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29 | Environmental | Open in IMG/M |
3300017757 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22 | Environmental | Open in IMG/M |
3300017767 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20 | Environmental | Open in IMG/M |
3300017772 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10 | Environmental | Open in IMG/M |
3300017776 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23 | Environmental | Open in IMG/M |
3300017950 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly) | Environmental | Open in IMG/M |
3300017951 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300017952 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300018080 | Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaG | Environmental | Open in IMG/M |
3300018421 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300018424 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300019459 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly) | Environmental | Open in IMG/M |
3300019731 | Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLT_3-4_MG | Environmental | Open in IMG/M |
3300019751 | Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MG | Environmental | Open in IMG/M |
3300020178 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly) | Environmental | Open in IMG/M |
3300020185 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1 | Environmental | Open in IMG/M |
3300020191 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly) | Environmental | Open in IMG/M |
3300020269 | Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556080-ERR599041) | Environmental | Open in IMG/M |
3300020294 | Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556124-ERR599153) | Environmental | Open in IMG/M |
3300020325 | Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX556073-ERR598966) | Environmental | Open in IMG/M |
3300020393 | Marine microbial communities from Tara Oceans - TARA_B100000161 (ERX556105-ERR599054) | Environmental | Open in IMG/M |
3300020403 | Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145) | Environmental | Open in IMG/M |
3300020421 | Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007) | Environmental | Open in IMG/M |
3300020436 | Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984) | Environmental | Open in IMG/M |
3300020437 | Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074) | Environmental | Open in IMG/M |
3300021551 | Marine sponge Stylissa sp. associated microbial community from CO2 seep in Upa-Upasina, Papua New Guinea - st43is 200bp no Eukaryotes last | Host-Associated | Open in IMG/M |
3300021958 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D | Environmental | Open in IMG/M |
3300021960 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D | Environmental | Open in IMG/M |
3300021962 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D | Environmental | Open in IMG/M |
3300021964 | Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D | Environmental | Open in IMG/M |
3300022050 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3) | Environmental | Open in IMG/M |
3300022063 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2) | Environmental | Open in IMG/M |
3300022072 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3) | Environmental | Open in IMG/M |
3300022158 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v3) | Environmental | Open in IMG/M |
3300022178 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3) | Environmental | Open in IMG/M |
3300022905 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG | Environmental | Open in IMG/M |
3300022927 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG | Environmental | Open in IMG/M |
3300023170 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG | Environmental | Open in IMG/M |
3300023180 | Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG | Environmental | Open in IMG/M |
3300024519 (restricted) | Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_27 | Environmental | Open in IMG/M |
3300025071 | Marine viral communities from the Pacific Ocean - LP-36 (SPAdes) | Environmental | Open in IMG/M |
3300025083 | Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025084 | Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes) | Environmental | Open in IMG/M |
3300025093 | Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaG (SPAdes) | Environmental | Open in IMG/M |
3300025098 | Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025099 | Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025101 | Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025102 | Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes) | Environmental | Open in IMG/M |
3300025110 | Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025128 | Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025151 | Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes) | Environmental | Open in IMG/M |
3300025296 | Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_231 (SPAdes) | Environmental | Open in IMG/M |
3300025685 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404 (SPAdes) | Environmental | Open in IMG/M |
3300025687 | Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes) | Environmental | Open in IMG/M |
3300025759 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes) | Environmental | Open in IMG/M |
3300025828 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA (SPAdes) | Environmental | Open in IMG/M |
3300025876 | Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes) | Environmental | Open in IMG/M |
3300025890 | Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes) | Environmental | Open in IMG/M |
3300025897 | Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes) | Environmental | Open in IMG/M |
3300026125 | Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MG (SPAdes) | Environmental | Open in IMG/M |
3300026130 | Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG (SPAdes) | Environmental | Open in IMG/M |
3300026138 | Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes) | Environmental | Open in IMG/M |
3300027704 | Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes) | Environmental | Open in IMG/M |
3300028022 | Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m | Environmental | Open in IMG/M |
3300029306 | Marine harbor viral communities from the Indian Ocean - SCH3 | Environmental | Open in IMG/M |
3300029309 | Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440 | Environmental | Open in IMG/M |
3300029318 | Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289 | Environmental | Open in IMG/M |
3300029319 | Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516 | Environmental | Open in IMG/M |
3300029792 | Marine giant viral communities collected during Tara Oceans survey from station TARA_041 - TARA_Y100000052 | Environmental | Open in IMG/M |
3300032073 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416 | Environmental | Open in IMG/M |
3300032274 | Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 1 | Environmental | Open in IMG/M |
3300032277 | Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite | Environmental | Open in IMG/M |
3300032373 | Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrrhotite 2 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
none_1457082 | 2236876001 | Marine Estuarine | MEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDDRVHGDTETD |
DelMOSum2010_100729551 | 3300000101 | Marine | RGQIRSLEDLQQSLKDLLSTTEYEDEVHGDTETD* |
DelMOWin2010_102036911 | 3300000117 | Marine | MEKLQYVRGQIRSLEDLQQSLKDLLSTTEYEDEVHGDTETD* |
SI36aug09_100mDRAFT_10272943 | 3300000238 | Marine | VDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYDDEQVHGDTETD* |
JGI11705J14877_101728071 | 3300001419 | Saline Water And Sediment | HKRIAELKDHAFYGVDTMEKLQYARGQIRSLEDLQQSLKDLLSTTEYEDEQVHGDTEED* |
JGI24006J15134_100687533 | 3300001450 | Marine | ARLKSHAIYSVDTMEKLQYVRGQIRSLEDLLQDLKDLLTTTEYDDEQVHGDTETD* |
JGI24005J15628_100667551 | 3300001589 | Marine | ARLKDNAIYSVDTIEKLQYVRGQIRSLEDLQQDLKDLLTTTEYDNEQVHGDTETD* |
GOS2267_1020743 | 3300001934 | Marine | MEKLQYVRGQIRSLEDLQQDLKDLLTQTEYEDEQVHGDTETD* |
NAP4_10939131 | 3300003474 | Estuarine | VDTIEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDEQVHGDTETD* |
Ga0074242_107344253 | 3300005346 | Saline Water And Sediment | MEKLQYARGQIRSLEDLQQGLKDLLSTTEYEDEQVHGDTEED* |
Ga0075478_100544883 | 3300006026 | Aqueous | KDQAFYGVDTMEKLQYARGQIRSLEDLQQDLKDLLSTTEYEDEQVHGDTEED* |
Ga0075478_101016491 | 3300006026 | Aqueous | VDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDDRVHGDTETD* |
Ga0075462_100453663 | 3300006027 | Aqueous | QYVRGQIRSLEDLQQDLKDLLTTTEYEDDRVHGDTETD* |
Ga0075466_11753221 | 3300006029 | Aqueous | GQIRSLEDLQQDLKDLLTTTEYEDDRVHGDTETD* |
Ga0075461_100247674 | 3300006637 | Aqueous | KDHAIYGVDTMEKLQYIRGQIRSLEDLQQDLKDLLTTTEYDDEQVHGNTEED* |
Ga0098038_11595963 | 3300006735 | Marine | LQLKDHAIYGVDTMEKLQYVRGQIRSLEDLQQDIKDLLITTEYEDEQVHGDTETD* |
Ga0098037_12992102 | 3300006737 | Marine | ARGQIRSLEDLQQDLKDLLSTTEYEDEQVHGNTEED* |
Ga0098042_10547503 | 3300006749 | Marine | RLKSHAIYSVDTIEKLQYVRGQIRSLEDLQQDLKDLLTTTEYDNEQVHGDTETD* |
Ga0098042_11722601 | 3300006749 | Marine | ILQLKDHAIYGVDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDEQVHGDTETD* |
Ga0098048_10761721 | 3300006752 | Marine | YSVDTIDQLQYVRGQIKSLEDLQQELKDLLNKQELEDDNVHGETETGWKT* |
Ga0098048_12427501 | 3300006752 | Marine | LKSHAIYGVDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDDRVHGDTETD* |
Ga0098055_13434372 | 3300006793 | Marine | SHAIYGVDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYDDEQVHGDTETD* |
Ga0070749_100810331 | 3300006802 | Aqueous | LQYIRGQIRSLEDLQQSLKDLLSTTEYEDEQVHGDTETD* |
Ga0070754_101123031 | 3300006810 | Aqueous | IRGQIRSLEDLQQSLKDLLSTTEYEDEQVHGDTETD* |
Ga0070750_100637111 | 3300006916 | Aqueous | NQIKDQAFYGVDTMEKLQYARGQIRSLEDLQQDLKDLLSTTEYEDEQVYGNTEED* |
Ga0070746_101701801 | 3300006919 | Aqueous | NQIKDQAFYGVDTMEKLQYARGQIRSLEDLQQDLKDLLSTTENEDEQVYGNTEED* |
Ga0070748_13312501 | 3300006920 | Aqueous | QYVRGQIRSLEDLQQDLKDLLTTTEYDNEQVHGDTETD* |
Ga0098060_11376993 | 3300006921 | Marine | KDTAIYSVDSMEQLQYVRGQIKSLEDLQQDLKDLLDKQEIEDEQVHGDTETD* |
Ga0098045_10651261 | 3300006922 | Marine | LKSHAIYGVDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYDNEQVHGDTETD* |
Ga0098051_11881411 | 3300006924 | Marine | KSHAIYGVDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDDRVHGDTETD* |
Ga0098050_10811703 | 3300006925 | Marine | DHAIYGVDTIEKLQYVRGQIRSLEDLQQDLKDLLSQTEYEDEQVHGDTETD* |
Ga0098041_10464091 | 3300006928 | Marine | DTIEKLQYVRGQIRSLEDLQQSLKDLLSQTEYEDEQVHGDTETD* |
Ga0098036_10751911 | 3300006929 | Marine | KLQYVRGQIRSLEDLQQDLKDLLSQTEYEDEQVHGDTETD* |
Ga0101550_10839821 | 3300007148 | Sylissa Sp. (Marine Sponge) | QLQYVRGQIKSLEDLQQELKDLLDKQELEDDNVHGKTETDW* |
Ga0110931_12053182 | 3300007963 | Marine | FYGVDTMEKLQYARGQIRSLEDLQQDLKDLLSTTEYEDEVHGSTEED* |
Ga0180120_100582741 | 3300017697 | Freshwater To Marine Saline Gradient | NQIKDQAFYGVDTMEKLQYARGQIRSLEDLQQDLKDLLSTTEYEDEQVYGNTEED |
Ga0180120_103245261 | 3300017697 | Freshwater To Marine Saline Gradient | LQYIRGQIRSLEDLQQSLKDLLSTTEYEDEVHGDTETD |
Ga0180120_103772871 | 3300017697 | Freshwater To Marine Saline Gradient | LQYVRGQIRSLEDLQQDLKDLLTTTEYEDDRVHGDTETD |
Ga0181369_10568491 | 3300017708 | Marine | AIYGVDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDDRVHGDTETD |
Ga0181369_11294652 | 3300017708 | Marine | DTMEKLQYVRGQIRSLEDLQQDLKDLLSTTEYEDEVHGSTEED |
Ga0181383_11762351 | 3300017720 | Seawater | QLQYVRGQIKSYEGLQQEIKDLLSKTEINDEQVHGDTETD |
Ga0181401_10278941 | 3300017727 | Seawater | LQYVRGQIRSLEDLQQDLKDLLVTTEYEDDRVHGDTETD |
Ga0181399_10766981 | 3300017742 | Seawater | IKDQAFYGVDTMEKLQYARGQIRSLEDLQQDLKDLLSTTEYEDESVHGNTETD |
Ga0181402_11420101 | 3300017743 | Seawater | YARGQIRSLEDLQQDLKDLLSTTEYEDESVHGNTETD |
Ga0181389_10399553 | 3300017746 | Seawater | SHAIYGVDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDDRVHGDTETD |
Ga0181405_10470153 | 3300017750 | Seawater | IYGVDTIEKLQYVRGQIRSLEDLQQDLKDLLVTTEYEDDRVHGDTETD |
Ga0181420_11881792 | 3300017757 | Seawater | GLEQLQYVRGQIKSYEGLQQEIKDLLSKTEINDEQVHGDTETD |
Ga0181406_11004371 | 3300017767 | Seawater | QYVRGQIRSLEDLQQYLKDLLTTTEYEDDRVHGDTETD |
Ga0181430_10669391 | 3300017772 | Seawater | HAIYGVDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDDRVHGDTETD |
Ga0181394_11019751 | 3300017776 | Seawater | GVDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYDDEQVHGDTETD |
Ga0181607_105983623 | 3300017950 | Salt Marsh | LQYIRGQIRSLEDLQQDLKDLLTTTEYDDEQVHGSTEED |
Ga0181577_102388211 | 3300017951 | Salt Marsh | DHAIYSVDTIEKLQYVRGQIKSYEDLQQEIKDLLSRTEIENEQVHGDTETD |
Ga0181583_107145841 | 3300017952 | Salt Marsh | IYSVDTIEKLQYIRGQIRSLEDLQQSLKDLLSTTEYEDEQVHGDTETD |
Ga0180433_105042131 | 3300018080 | Hypersaline Lake Sediment | HAIYGVDTMEKLQYIRGQIRSLEDLQQDLKDLLSTTEYEDEVHGDTETD |
Ga0181592_101064421 | 3300018421 | Salt Marsh | QYVRGQIRSLEDLQQSLKDLLSTTEYEDEVHGDTETD |
Ga0181591_103662111 | 3300018424 | Salt Marsh | LQKLKDHAIYSVDTIEKLQYVRGQIRSLEDLQQSLKDLLSQMEYEDEQVHGDTETD |
Ga0181562_100218661 | 3300019459 | Salt Marsh | MEKLQYVRGQIRSLEDLQQSLKDLLSTTEYEDEVHGDTETD |
Ga0193982_10274873 | 3300019731 | Sediment | IYSVDTMEKLQYVRGQIRSLEDLQQSLKDLLSTTEYEDEVHGDTETD |
Ga0194029_10009611 | 3300019751 | Freshwater | VRGQIRSLEDLQQSLKDLLSTTEYEDEVHGDTETD |
Ga0181599_11171851 | 3300020178 | Salt Marsh | KSYAIYSVDTMEKLQYVRGQIRSLEDLQQSLKDLLSTTEYEDEVHGDTETD |
Ga0206131_101511243 | 3300020185 | Seawater | VRGQIRSLEDLQQDLKDLLTTTEYDNEQVHGDTETD |
Ga0181604_101088151 | 3300020191 | Salt Marsh | TMEKLQYIRGQIRSLEDLQQSLKDLLSTTEYEDEVHGDTETD |
Ga0211484_10251453 | 3300020269 | Marine | RLNRLKDTAIYSVDSMEQLQYVRGQIKSLEDLQQDLKDLLDKQEIEDEQVHGDTETD |
Ga0211520_10388101 | 3300020294 | Marine | DTIEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDEQVHGDTETD |
Ga0211507_11031841 | 3300020325 | Marine | SVDSMEQLQYVRGQIKSLEDLQQDLKDLLDKQEIEDEQVHGDTETD |
Ga0211618_102570492 | 3300020393 | Marine | LLKSHAAYSVDTMEELKYVRGQIKSLEDLQQEIKDLLSKTENIDEQVHGDTETD |
Ga0211532_100734803 | 3300020403 | Marine | SVDTMDQLQYVRGQIKSLEDLQQELKDLLNKQEIEDDNVHGETETDWET |
Ga0211532_100764443 | 3300020403 | Marine | SVDTMDQLQYVRGQIKSLEDLQQELKDLLDKQELEDDNVHGKTETDWET |
Ga0211653_103004673 | 3300020421 | Marine | AIYGVDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDEQVHGATETD |
Ga0211708_101604101 | 3300020436 | Marine | YSVDTLEKLQYVRGQIKSLEDLQQELKDLLNKQELKDANVHGNETD |
Ga0211539_104203632 | 3300020437 | Marine | RCKTHAIYGVDSWDELQYIRGQIRSLEDLQQEIKDLLSKTENIDEQVHGDTETD |
Ga0224714_11036901 | 3300021551 | Sylissa Sp. (Marine Sponge) | QLQYVRGQIKSLEDLQQELKDLLDKQELEDDNVHGKTETDW |
Ga0222718_103653031 | 3300021958 | Estuarine Water | RGQIRSLEDLQQSLKDLLSTTEYEDEQVHGDTETD |
Ga0222715_101054964 | 3300021960 | Estuarine Water | LQYIRGQIRSLEDLQQSLKDLLSTTEYEDEQVHGDTETD |
Ga0222713_105974861 | 3300021962 | Estuarine Water | EKLQYARGQIRSLEDLQQDLKDLLSTTEYEDEQVYGNTEED |
Ga0222719_100589346 | 3300021964 | Estuarine Water | QAFYGVDTMEKLQYARGQIRSLEDLQQDLKDLLSTTEYEDEQVHGDTEED |
Ga0222719_107313192 | 3300021964 | Estuarine Water | YSVDTMEKLQYVRGQIRSLEDLQQDLKDLLTNTEYEDEQVHGDTETD |
Ga0196883_10014941 | 3300022050 | Aqueous | GEIEKLKSYAIYSVDTMEKLQYVRGQIRSLEDLQQSLKDLLSTTEYEDEVHGDTETD |
Ga0212029_10736881 | 3300022063 | Aqueous | GVDTMEKLQYIRGQIRSLEDLQQDLKDLLTTTEYDDEQVHGNTEED |
Ga0196889_10036966 | 3300022072 | Aqueous | VDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDDRVHGDTETD |
Ga0196897_10191023 | 3300022158 | Aqueous | AIYSVDTMEKLQYVRGQIRSLEDLQQSLKDLLSTTEYEDEVHGDTETD |
Ga0196887_11200372 | 3300022178 | Aqueous | AIYSVDSMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDDRVHGDTETD |
Ga0255756_12636201 | 3300022905 | Salt Marsh | IEKLKSYAIYSVDTMEKLQYVRGQIRSLEDLQQSLKDLLSTTEYEDEVHGDTETD |
Ga0255769_101874541 | 3300022927 | Salt Marsh | LQYVRGQIRSLEDLQQSLKDLLSTTEYEDEVHGDTETD |
Ga0255761_102299561 | 3300023170 | Salt Marsh | EHAIYSVDTIEKLQYIRGQIRSLEDLQQSLKDLLSTTEYEDEQVHGDTETD |
Ga0255768_105258691 | 3300023180 | Salt Marsh | EKLQYVRGQIRSLEDLQQSLKDLLSQMEYEDEQVHGDTETD |
(restricted) Ga0255046_100509354 | 3300024519 | Seawater | TIEKLQYVRGQIRSLEDLQQDLKDLLTTTEYDNEQVHGDTETD |
Ga0207896_10110181 | 3300025071 | Marine | MEKLQYARGQIRSLEDLQQDLKDLLSTTEYEDESVYRDTEKD |
Ga0207896_10124223 | 3300025071 | Marine | KDNAIYSVDTIEKLQYVRGQIRSLEDLQQDLKDLLTTTEYDNEQVHGDTETD |
Ga0208791_10080271 | 3300025083 | Marine | RGQIRSLEDLQQDLKDLLTTTEYEDDRVHGDTETD |
Ga0208298_10077506 | 3300025084 | Marine | RLKSHAIYGVDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDDRVHGDTETD |
Ga0208794_10342661 | 3300025093 | Marine | ILQLKDHAIYGVDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDEQVHGDTETD |
Ga0208794_10668853 | 3300025093 | Marine | EQLQYVRGQIKSYEDLQQEIKDLLSRTEIENEQVHGDTETD |
Ga0208434_10611161 | 3300025098 | Marine | QIKSLEDLQQELKDLLNKQEFEDDNVHGETETDWKT |
Ga0208669_10341101 | 3300025099 | Marine | LEKLQYVRGQIRSLEDLQQDLKDLLSKTEYNDEQVHGDTETD |
Ga0208159_10259621 | 3300025101 | Marine | QLKDHAIYGVDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDEQVHGDTETD |
Ga0208159_10737612 | 3300025101 | Marine | KRLDRYKEAAIYSVDTMDQLQYVRGQIKSLEDLQQELKDLLDKQELEDDNVHGKTETDWE |
Ga0208666_10120481 | 3300025102 | Marine | KEAAIYSVDTIDQLQYVRGQIKSLEDLQQELKDLLNKQELEDDNVHGETETG |
Ga0208158_10228681 | 3300025110 | Marine | IYGVDTMEQLQYVRGQIKSYEDLQQEIKDLLSRTEIENEQVHGNTETD |
Ga0208919_10919871 | 3300025128 | Marine | LERYKEAAIYSVDTIDQLQYVRGQIKSLEDLQQELKDLLNKQELEDDNVHGATETD |
Ga0208919_11520143 | 3300025128 | Marine | VRGQIRSLEDLQQDLKDLLTTTEYEDEQVHGDTETD |
Ga0208919_11659021 | 3300025128 | Marine | VRGQIKSLEDLQQDLKDLLDKQEIEDEQVHGDTETD |
Ga0208919_11767372 | 3300025128 | Marine | KDHAIYGVDTIEQLQYVRGQIKSYEDLQQEIKDLLSRTEIENEQVHGDTETD |
Ga0209645_11289033 | 3300025151 | Marine | KDHAIYSVDTIEKLQYVRGQIRSLEDLQQSLKDLLSTTEYEDEVHGDTETD |
Ga0208316_10973412 | 3300025296 | Deep Ocean | IEKLQYVRGQIRSLEDLQQDLKDLLTTTEYDDEQVHGDTETD |
Ga0209095_11608923 | 3300025685 | Pelagic Marine | VDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYDDEQVHGDTETD |
Ga0208019_10451191 | 3300025687 | Aqueous | IYSVDTIEKLQYIRGQIRSLEDLQQSLKDLLSTMEYEDEVHGDTETD |
Ga0208899_10136647 | 3300025759 | Aqueous | AIYSVDTIEKLQYIRGQIRSLEDLQQSLKDLLSTTEYEDEQVHGDTETD |
Ga0208547_10303594 | 3300025828 | Aqueous | KDQAFYGVDTMEKLQYARGQIRSLEDLQQDLKDLLSTTEYEDEQVHGDTEED |
Ga0209223_100811501 | 3300025876 | Pelagic Marine | RDHAIYGVDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDEQVHGDTETD |
Ga0209631_101116651 | 3300025890 | Pelagic Marine | ARLKDNAIYSVDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDDRVHGDTETD |
Ga0209425_101485063 | 3300025897 | Pelagic Marine | VDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDEQVHGDTETD |
Ga0209962_10383983 | 3300026125 | Water | NIVYSVDTVEKLQYVRGQIRSLEDLQQDLKDLLTTTEYDNEQVHGDTETD |
Ga0209961_10736422 | 3300026130 | Water | LEIEKLKSYAIYSVDTMEKLQYVRGQIRSLEDLQQSLKDLLSTTEYEDEVHGDTETD |
Ga0209951_11328752 | 3300026138 | Pond Water | VKKALARLKENIVYSVDTVEKLQYVRGQIRSLEDLQQDLKDLLTTTEYDNEQVHGDTETD |
Ga0209816_11687473 | 3300027704 | Marine | IYSVDTMEKLQYVRGQIRSLEDLLQDLKDLLTTTEYDDEQVHGDTETD |
Ga0256382_10105694 | 3300028022 | Seawater | YGVDTIEKLQYVRGQIRSLEDLQQDLKDLLKTTEYEDEELYGDTEKD |
Ga0135212_10269322 | 3300029306 | Marine Harbor | KLKDHAIYSVDTIEKLQYVRGQIRSLEDLQQSLKDLLSTTEYEDEVHGDTETD |
Ga0183683_10296673 | 3300029309 | Marine | IDQLQYVRGQIKSLEDLQQELKDLLNKQELEDDNVHGATETD |
Ga0185543_10404753 | 3300029318 | Marine | LKDHAIYSVDTIEKLQYVRGQIRSLEDLQQSLKDLLSTTEYEDEVHGDTETD |
Ga0183748_11264592 | 3300029319 | Marine | EMDRLKDHAIYGVDTMEQLQYVRGQIKSYEDLQQEIKDLLSRTEIENEQVHGDTETD |
Ga0183826_10663012 | 3300029792 | Marine | KMISRILERCKTHAIYGVDSWDELQYIRGQIRSLEDLQQEIKDLLSKTENIDEQVHGDTETD |
Ga0315315_102472074 | 3300032073 | Seawater | HAIYSVDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYEDDRVHGDTETD |
Ga0315315_116504942 | 3300032073 | Seawater | ARGQIRSLEDLQQDLKDLLSTTEYEDEQVHGNTEED |
Ga0316203_10068666 | 3300032274 | Microbial Mat | RGQIRSLEDLQQDLKDLLSTTEYEDEQVYGNTEED |
Ga0316202_101225353 | 3300032277 | Microbial Mat | RLKDHAIYSVDTMEKLQYVRGQIRSLEDLQQDLKDLLTTTEYDDEQVHGDTETD |
Ga0316202_103930181 | 3300032277 | Microbial Mat | EKLQYIRGQIRSLEDLQQSLKDLLSTTEYEDEVHGDTETD |
Ga0316204_104191681 | 3300032373 | Microbial Mat | KLKDHAIYSVDTIEKLQYIRGQIRSLEDLQQSLKDLLSTTEYEDEQVHGDTETD |
Ga0316204_109270681 | 3300032373 | Microbial Mat | TVEKLQYVRGQIRSLEDLQQDLKDLLTTTEYDNEQVHGDTETD |
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