Metagenome Family F064217

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064217
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	60 residues
Representative Sequence	DAQANIRYDVYVNGSFEDVRFGSGGPIIAYGVFGQNTIEVIASDTAGNASPPATTTLFIP
Number of Associated Samples	100
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.10 %
% of genes near scaffold ends (potentially truncated)	92.25 %
% of genes from short scaffolds (< 2000 bps)	87.60 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.496 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.178 % of family members)
Environment Ontology (ENVO)	Unclassified (45.736 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.535 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.41% β-sheet: 35.23% Coil/Unstructured: 61.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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SCOP family	SCOP domain	Representative PDB	TM-score
b.1.18.0: E set domains	d4oy7a_	4oy7	0.76
b.1.18.0: E set domains	d4oy7a_	4oy7	0.76
b.1.18.0: E set domains	d5fjqa_	5fjq	0.74
b.1.18.0: E set domains	d5fjqa_	5fjq	0.74
b.1.2.0: Fibronectin type III	d4eq3a1	4eq3	0.73
b.1.2.0: Fibronectin type III	d4eq3a1	4eq3	0.73
b.1.2.1: Fibronectin type III	d1uc6a1	1uc6	0.72
b.1.18.0: E set domains	d6rw7a1	6rw7	0.72
b.1.2.1: Fibronectin type III	d1uc6a1	1uc6	0.72
b.1.18.0: E set domains	d6rw7a1	6rw7	0.72

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF13360	PQQ_2	5.43
PF13570	PQQ_3	1.55
PF13964	Kelch_6	1.55
PF13340	DUF4096	1.55
PF14339	DUF4394	0.78
PF02012	BNR	0.78
PF02230	Abhydrolase_2	0.78
PF12904	Collagen_bind_2	0.78
PF13632	Glyco_trans_2_3	0.78
PF13754	Big_3_4	0.78
PF02622	DUF179	0.78
PF02776	TPP_enzyme_N	0.78
PF00248	Aldo_ket_red	0.78
PF03544	TonB_C	0.78
PF04542	Sigma70_r2	0.78
PF00127	Copper-bind	0.78
PF13088	BNR_2	0.78
PF00072	Response_reg	0.78
PF00773	RNB	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0557	Exoribonuclease R	Transcription [K]	0.78
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.78
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.78
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.78
COG1678	Putative transcriptional regulator, AlgH/UPF0301 family	Transcription [K]	0.78
COG4776	Exoribonuclease II	Transcription [K]	0.78
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.50 %
Unclassified	root	N/A	15.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.50 %
Unclassified	root	N/A	15.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.50 %
Unclassified	root	N/A	15.50 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	51.94 %
Unclassified	root	N/A	15.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.33 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.78 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	51.16 %
Unclassified	root	N/A	15.50 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6.20 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	48.06 %
Unclassified	root	N/A	15.50 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	6.20 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.78 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.78 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	48.06 %
Unclassified	root	N/A	15.50 %
Chloroflexi bacterium RBG_16_54_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_11	6.20 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.78 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.78 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.78 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	48.06 %
Unclassified	root	N/A	15.50 %
Chloroflexi bacterium RBG_16_54_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_11	6.20 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.78 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.78 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.78 %
Luteimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Luteimonas	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	48.06 %
Unclassified	root	N/A	15.50 %
Chloroflexi bacterium RBG_16_54_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_11	6.20 %
Weeksellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae	0.78 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.78 %
Luteimonas huabeiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Luteimonas → Luteimonas huabeiensis	0.78 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	48.06 %
Unclassified	root	N/A	15.50 %
Chloroflexi bacterium RBG_16_54_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_11	6.20 %
Chryseobacterium group	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Chryseobacterium group	0.78 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.78 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.78 %
Luteimonas huabeiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Luteimonas → Luteimonas huabeiensis	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	48.06 %
Unclassified	root	N/A	15.50 %
Chloroflexi bacterium RBG_16_54_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_11	6.20 %
Pedosphaera parvula Ellin514	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	0.78 %
Chryseobacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Chryseobacterium group → Chryseobacterium	0.78 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.78 %
Luteimonas huabeiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Luteimonas → Luteimonas huabeiensis	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502000\|ACOD_FV90NF402H1YFY	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
2040502001\|FACENC_GAMC6GA01BQ6YQ	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
2228664021\|ICCgaii200_c0939782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_11	1080	Open in IMG/M
3300000550\|F24TB_10299209	All Organisms → cellular organisms → Bacteria	2772	Open in IMG/M
3300000550\|F24TB_10606727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_11	1085	Open in IMG/M
3300000559\|F14TC_101210952	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	799	Open in IMG/M
3300000559\|F14TC_101691664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	704	Open in IMG/M
3300000709\|KanNP_Total_F14TBDRAFT_1004472	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300000955\|JGI1027J12803_102288997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_11	800	Open in IMG/M
3300000955\|JGI1027J12803_104247374	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300000956\|JGI10216J12902_101616017	All Organisms → cellular organisms → Bacteria	5421	Open in IMG/M
3300000956\|JGI10216J12902_103516229	All Organisms → cellular organisms → Bacteria	2687	Open in IMG/M
3300000956\|JGI10216J12902_105008054	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	982	Open in IMG/M
3300000956\|JGI10216J12902_114808144	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
3300001431\|F14TB_100927079	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300001431\|F14TB_100994071	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1688	Open in IMG/M
3300001431\|F14TB_101944632	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300001431\|F14TB_101985119	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300003267\|soilL1_10182872	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300003911\|JGI25405J52794_10086305	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300004114\|Ga0062593_101607018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Luteimonas → Luteimonas huabeiensis	706	Open in IMG/M
3300004463\|Ga0063356_101958407	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	885	Open in IMG/M
3300004479\|Ga0062595_102211099	Not Available	539	Open in IMG/M
3300005093\|Ga0062594_102747429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300005186\|Ga0066676_10041176	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2577	Open in IMG/M
3300005290\|Ga0065712_10387797	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	707	Open in IMG/M
3300005293\|Ga0065715_10108792	All Organisms → cellular organisms → Bacteria	2689	Open in IMG/M
3300005293\|Ga0065715_11120119	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300005294\|Ga0065705_10626162	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300005327\|Ga0070658_10225919	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300005441\|Ga0070700_101199036	Not Available	634	Open in IMG/M
3300005466\|Ga0070685_11288154	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	558	Open in IMG/M
3300005562\|Ga0058697_10178727	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300005764\|Ga0066903_108077354	Not Available	539	Open in IMG/M
3300005840\|Ga0068870_10252824	All Organisms → cellular organisms → Bacteria → PVC group	1093	Open in IMG/M
3300005841\|Ga0068863_102049318	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300006046\|Ga0066652_101950495	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300006846\|Ga0075430_101584411	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300006852\|Ga0075433_10622278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	947	Open in IMG/M
3300006880\|Ga0075429_100670124	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	909	Open in IMG/M
3300007004\|Ga0079218_11047079	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Chryseobacterium group → Chryseobacterium	824	Open in IMG/M
3300007004\|Ga0079218_11536355	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	724	Open in IMG/M
3300009012\|Ga0066710_101155160	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1199	Open in IMG/M
3300009100\|Ga0075418_13123212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300009156\|Ga0111538_10350028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1870	Open in IMG/M
3300009156\|Ga0111538_12163295	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	699	Open in IMG/M
3300009156\|Ga0111538_12305059	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	676	Open in IMG/M
3300010038\|Ga0126315_10045048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_11	2371	Open in IMG/M
3300010040\|Ga0126308_10152962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_11	1458	Open in IMG/M
3300010045\|Ga0126311_11940306	Not Available	500	Open in IMG/M
3300010047\|Ga0126382_10466883	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1005	Open in IMG/M
3300010047\|Ga0126382_10635614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_11	884	Open in IMG/M
3300010333\|Ga0134080_10392431	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300010333\|Ga0134080_10422671	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	620	Open in IMG/M
3300010360\|Ga0126372_12654857	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300010366\|Ga0126379_11877828	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	702	Open in IMG/M
3300010373\|Ga0134128_11278251	Not Available	809	Open in IMG/M
3300010375\|Ga0105239_10161566	All Organisms → cellular organisms → Bacteria	2503	Open in IMG/M
3300010399\|Ga0134127_10322535	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300010399\|Ga0134127_12036522	Not Available	652	Open in IMG/M
3300010399\|Ga0134127_12096828	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	644	Open in IMG/M
3300010399\|Ga0134127_12148633	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	637	Open in IMG/M
3300010403\|Ga0134123_10422367	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1230	Open in IMG/M
3300010403\|Ga0134123_11520055	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	714	Open in IMG/M
3300011413\|Ga0137333_1024978	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1330	Open in IMG/M
3300011420\|Ga0137314_1144466	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300011430\|Ga0137423_1229248	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300011445\|Ga0137427_10040310	All Organisms → cellular organisms → Bacteria → Proteobacteria	1841	Open in IMG/M
3300012198\|Ga0137364_10055116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_11	2662	Open in IMG/M
3300012200\|Ga0137382_10645723	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	757	Open in IMG/M
3300012201\|Ga0137365_11159136	Not Available	554	Open in IMG/M
3300012208\|Ga0137376_10866461	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	776	Open in IMG/M
3300012285\|Ga0137370_10017222	All Organisms → cellular organisms → Bacteria	3570	Open in IMG/M
3300012353\|Ga0137367_10179059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1540	Open in IMG/M
3300012354\|Ga0137366_10299718	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1183	Open in IMG/M
3300012355\|Ga0137369_10163179	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1756	Open in IMG/M
3300012685\|Ga0137397_10915614	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	650	Open in IMG/M
3300012916\|Ga0157310_10415932	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300012929\|Ga0137404_10064407	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2854	Open in IMG/M
3300012929\|Ga0137404_11644997	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	596	Open in IMG/M
3300012929\|Ga0137404_11683731	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300012960\|Ga0164301_11867323	Not Available	507	Open in IMG/M
3300012977\|Ga0134087_10557662	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300012987\|Ga0164307_11610220	Not Available	550	Open in IMG/M
3300013102\|Ga0157371_10725185	Not Available	745	Open in IMG/M
3300014969\|Ga0157376_10249694	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1656	Open in IMG/M
3300015264\|Ga0137403_11042845	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	664	Open in IMG/M
3300015371\|Ga0132258_10343764	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3687	Open in IMG/M
3300015371\|Ga0132258_11761027	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1562	Open in IMG/M
3300015372\|Ga0132256_100594359	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300015372\|Ga0132256_100805390	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300015372\|Ga0132256_103217657	Not Available	549	Open in IMG/M
3300018061\|Ga0184619_10131789	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1135	Open in IMG/M
3300018072\|Ga0184635_10024621	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2232	Open in IMG/M
3300018073\|Ga0184624_10028219	All Organisms → cellular organisms → Bacteria	2151	Open in IMG/M
3300018422\|Ga0190265_10287917	Not Available	1707	Open in IMG/M
3300018433\|Ga0066667_11900529	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300019869\|Ga0193705_1008565	All Organisms → cellular organisms → Bacteria	2232	Open in IMG/M
3300019878\|Ga0193715_1077570	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	691	Open in IMG/M
3300019879\|Ga0193723_1063525	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1072	Open in IMG/M
3300019881\|Ga0193707_1178158	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	565	Open in IMG/M
3300019883\|Ga0193725_1121857	Not Available	593	Open in IMG/M
3300019886\|Ga0193727_1171979	Not Available	565	Open in IMG/M
3300020170\|Ga0179594_10296390	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300021344\|Ga0193719_10049261	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1825	Open in IMG/M
3300021344\|Ga0193719_10079826	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1421	Open in IMG/M
3300021344\|Ga0193719_10229058	Not Available	789	Open in IMG/M
3300021972\|Ga0193737_1021943	Not Available	900	Open in IMG/M
3300022534\|Ga0224452_1057467	Not Available	1161	Open in IMG/M
3300022534\|Ga0224452_1277996	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300022756\|Ga0222622_10072819	All Organisms → cellular organisms → Bacteria	2027	Open in IMG/M
3300022756\|Ga0222622_10779343	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300025903\|Ga0207680_10783386	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	684	Open in IMG/M
3300025930\|Ga0207701_10955151	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300025932\|Ga0207690_11633456	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300025933\|Ga0207706_10319395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_11	1352	Open in IMG/M
3300025961\|Ga0207712_10063678	All Organisms → cellular organisms → Bacteria	2626	Open in IMG/M
3300025972\|Ga0207668_11130803	Not Available	703	Open in IMG/M
3300026023\|Ga0207677_11869697	Not Available	558	Open in IMG/M
3300026075\|Ga0207708_10792912	Not Available	815	Open in IMG/M
3300026089\|Ga0207648_10795252	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	880	Open in IMG/M
3300026374\|Ga0257146_1067803	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300027533\|Ga0208185_1046227	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300028715\|Ga0307313_10108796	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300028784\|Ga0307282_10303082	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300031720\|Ga0307469_10111219	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300032075\|Ga0310890_10322756	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300032075\|Ga0310890_11356872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
3300032157\|Ga0315912_11278449	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.19%
Host-Associated	Host-Associated	24.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.89%
Plants	Host-Associated → Plants	24.03%
Aquatic	Environmental → Aquatic	9.30%
Arthropoda	Host-Associated → Arthropoda	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.73%
Sediment	Environmental → Aquatic → Sediment	9.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.53%
Symbiotic Fungal Gardens And Galleries	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries	0.78%
Phylloplane	Host-Associated → Plants → Phylloplane	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.81%
Loam	Environmental → Terrestrial → Soil → Loam	10.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.53%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.88%
Fungus Garden	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden	0.78%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.53%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	6.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.20%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.55%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%
Unclassified	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.18%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	6.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.43%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.43%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.10%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.33%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	2.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.33%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Fungus Garden	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified → Fungus Garden	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502000	Fungus garden microbial communities from Atta colombica in Panama - dump bottom	Host-Associated	Open in IMG/M
2040502001	Soil microbial communities from sample at FACE Site 2 North Carolina CO2+	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000709	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA F1.4 TB amended with BrdU and acetate no abondance	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011413	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT231_2	Environmental	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021972	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ACODB_10354070	2040502000	Fungus Garden	MQIQWAQSTDDFDTQANIRYDVYINGAFEDVRFGSGGPITAYGVFGENTIEVIATDTAGNASSPATTTLFIP
FACENCE_4490310	2040502001	Soil	MQIQWTQSTDDFDAQANIRYDVYVNGALEDFRFGSGGPIIAYGEFGQNTIEVIASDTAGNASPPATTTLFIP
ICCgaii200_09397821	2228664021	Soil	GSGFISSIYGVSGENTIEVIASDTAGNASPPATTTIILP
F24TB_102992093	3300000550	Soil	QSTDDFDAQSNLRYDVYLNGVLEDVRFGSGGPITAYGVFGENTVEVIASDTAGNAAPPGTTTVFIP*
F24TB_106067272	3300000550	Soil	QSTDDFDVQANIRYDVYVNGTLEEVRFGSGGPVTAYGVFGENTIEVIASDTAGNASPPATTTLFIP*
F14TC_1012109522	3300000559	Soil	NIRYDVYVNGTLEDIRFGSGGPLTAYGVLGENTIEVIASDTAGNAAPPATTILFLP*
F14TC_1016916641	3300000559	Soil	VLEDVRFGSGGPITAYGVFGENTVEVIASDTAGNASPPATTTIFF*
KanNP_Total_F14TBDRAFT_10044721	3300000709	Soil	GHLEEVRFGSSFISSIYGQPGENTIEVIASDTAGNKSGPATTTISL*
JGI1027J12803_1022889971	3300000955	Soil	QSTDDFDAQANIRYDVYVNGALEDVRFGSGGPITAYGVFGENAIEVIASDTAGNASPPATTTLFIP*
JGI1027J12803_1042473741	3300000955	Soil	QSTDDFDAQANIRYDVYVNGALEDVRFGSGGPITAYGIFGENTIEVIASDTAGNASPPA
JGI10216J12902_1016160171	3300000956	Soil	GPITDYGQSGWNTIEVVAVDTAGNRSAAATTTIFL*
JGI10216J12902_1035162291	3300000956	Soil	STDDFDAQANIRYDVYVNGRFEDVVFGSGGPRVIYGTGFGENLIEVFATDTAGNTSAAGTFRIFL*
JGI10216J12902_1050080541	3300000956	Soil	TQSTDDFDAQSNIRYDVYVNGVFQDVLFGSGGESIVYAEFGENLIEVTATDTAGNTSAPATFTIFF*
JGI10216J12902_1148081441	3300000956	Soil	TQSTDDFDAQSNIRYDFYLNGVLQEVLFGSGRPSTVYAEFGENTIEVTATDTAGNTSAPATVTIFF*
F14TB_1009270792	3300001431	Soil	DGSTEMQIQWAQSTDDFDVQANIRYDVYVNGTLEEVRFGSGGPVTAYGVFGENTIEVIASDTAGNASPPATTTLFIP*
F14TB_1009940713	3300001431	Soil	NIRYDVYVNGTFEDVRFGSGPIIAYGVFGQNTIEVIASDAAGNASPPATTTLFIP*
F14TB_1019446322	3300001431	Soil	TEMQIQWAQSTDDFDDQANIRYDIYVNGRLEDWVFGDGGPXXXXSDFGENLIEVFATDTAGNPSEPATTTIFF*
F14TB_1019851192	3300001431	Soil	RYDVYLNGHLEEVRFGSGFISSIYGVSGENTIEVIASDTAGNASPPATTTIILP*
soilL1_101828721	3300003267	Sugarcane Root And Bulk Soil	ETQLSWQQSTDDFDDPANIRYDIYVNGRLEDFVFGSGGPRIIYADFGDNIIEVFATDTAGNTSEAGTATIFF*
JGI25405J52794_100863052	3300003911	Tabebuia Heterophylla Rhizosphere	STDDFDAQANIRYDVYINGVFADVLFGSGGPIPDYGVFGENTIEVIATDTAGNASPPATTTIFIP*
Ga0062593_1016070181	3300004114	Soil	DLEFQLWWTQSTDDFDRQENIRYDVYLNGHLEEVRFGSGFISSIYGVSGENTIEVIASDTAGNASPPATTTIILP*
Ga0063356_1019584071	3300004463	Arabidopsis Thaliana Rhizosphere	LSWTQSTDDFDAQANIRYDVYVNGRFEDVVFGSGGPRVIYGTNFGDNLIEVFATDTAGNTSAAGTFRIFL*
Ga0062595_1022110992	3300004479	Soil	VRFGSGGPITAYGVFGENTIEVIASDTAGNASPPGTTTLFIP*
Ga0062594_1027474292	3300005093	Soil	SWGQSTDDFDAQANIRYDVYVNGHFEDVVFGSGGPRVIYGTGFGENLIEVFATDTAGNTSAAGTFTIFL*
Ga0066676_100411761	3300005186	Soil	GDGSTEMQIQWAQSTDDFDAQSNIRYDVYVNGSLEDIRFGSGGPGIAYGVFGENTIEVIASDTTGNASPPATTTLFIP*
Ga0065712_103877973	3300005290	Miscanthus Rhizosphere	DAQANIRYDVYVNGALEDFRFGSGGPIVAYGEFGQNTIEVIASDTAGNASPPATTTLFIP
Ga0065715_101087921	3300005293	Miscanthus Rhizosphere	DFRFGSGGPIVAYGEFGQNTIEVIASDTAGNASPPATTTLFIP*
Ga0065715_111201192	3300005293	Miscanthus Rhizosphere	FGDGSTEMQIQWAQSTDDFDAPSNIRYDVYVNGAFEDVRFGSGGPIVAYGVFGENTIEVIASDTAGNASPPATTTLFIP*
Ga0065705_106261622	3300005294	Switchgrass Rhizosphere	FGSGFISSIYGVSGENTIEVIASDTAGNASPPATTTIILP*
Ga0070658_102259192	3300005327	Corn Rhizosphere	QWTQSTDDFDAQANIRYDVYINGTFEDVLFGSGGPIPDYGVLGDNTIEVIATDTAGNASPPATTTIHLP*
Ga0070700_1011990362	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	IRFGSGGPITAYGQPGQNTIQVIASDTAGNASAPATITIFL*
Ga0070685_112881541	3300005466	Switchgrass Rhizosphere	QSTDDFDAQANIRYDVYVNGALEDFRFGSGGPIVAYGEFGQNTIEVIASDTAGNASPPAMTTLFIP*
Ga0058697_101787271	3300005562	Agave	QVSWSQSTDDFDAQSNISYYVYLNGVLQEVLVGSGGPISVYAEFGENLIEVVARDTAGNKSAPGTATIFF*
Ga0066903_1080773541	3300005764	Tropical Forest Soil	DFRFGSGGPIIAYGEFGQNTIEVIASDTAGNASAPATTTLFIP*
Ga0068870_102528241	3300005840	Miscanthus Rhizosphere	AQDLCDQTYFDAQAHIRYDVYINGVLGDILFGSGGRIFNGEFGENIIEVFATDTAGNTTEPAVLFLFIP*
Ga0068863_1020493182	3300005841	Switchgrass Rhizosphere	QSTDNFDAQANIRYDVYVNGRFEDVVFGSGGPRVIYGDSGDNLFEVFATDTAGNTSAAGIFRIHLP*
Ga0066652_1019504951	3300006046	Soil	DDFDAQSNIRYDVYLNGVFQEVLFGSGGPTIMYAEFGENLIEVTATDTAGNTSVPATVTIFF*
Ga0075430_1015844112	3300006846	Populus Rhizosphere	LRTLSWGQSTDDFDAQANIRYDIYVNGRFEEVNLIEVFATDTAGNTSAAGTFRIFL*
Ga0075433_106222783	3300006852	Populus Rhizosphere	QWTQSTDDFDAQANIRYDVYINGSFADVLFGSGGPIPDYGELGDNTIEVIATDTAGNASPPATATIHLP*
Ga0075429_1006701241	3300006880	Populus Rhizosphere	TDDFDAQANIRYDVYVNGRFEDVVFGSGGPRVIYGTNFGDNLIEVFATDTAGNTSAAGTFRIFL*
Ga0079218_110470791	3300007004	Agricultural Soil	MWTQSTDDFDRQENIRYDVYVNGVLEEVRFGSSSISSIYGKSGDNLIEVYATDTAGNISPPATTTITLP*
Ga0079218_115363551	3300007004	Agricultural Soil	STDDFDAQANIRYDVYVNGRFEDVVFGSGGPRVIYGTDFGDNLIEVFATDTAGNTSAAGTFTKTLP*
Ga0066710_1011551602	3300009012	Grasslands Soil	VREDVHLREQSGIRYDVYVNGVFQDVLFGSGGPSIIYANFGESLIEVTATNTAGNTSAPATVTAFL
Ga0075418_131232122	3300009100	Populus Rhizosphere	SWAQSTDDFDAQANIRYDVYVNGRLEDIVFGSGGPRVIYGDFGNNLIEVFATDTAGNTSAAGTTTISL*
Ga0111538_103500281	3300009156	Populus Rhizosphere	DDFDRQENIRYDVYLNGHLEEVRFGSGFISSIYGVSGENTIEVIASDTAGNASPPATTTIILP*
Ga0111538_121632952	3300009156	Populus Rhizosphere	MQLSWTQSTDDFDAQVNIRYDVYVNGRFEDVVFGSGGPRVIYGTGFGENLIEVFATDTAGNTSAAGTFTIFL*
Ga0111538_123050591	3300009156	Populus Rhizosphere	WAQSTDDFDAQANIRYDVYVNGRLEDILFGSGGPRIIYSDFGENLIEVFATDTAGNTSAAATTTIFF*
Ga0126315_100450482	3300010038	Serpentine Soil	DRQENIRYDVYLNGHLEEVRFGSGFISSIYGVAGENTIEVIASDTAGNASPPATTTLFLP
Ga0126308_101529623	3300010040	Serpentine Soil	EEVRFGSGFISSIYGVSGENTIEVIASDTAGNASPPATATLFLP*
Ga0126311_119403062	3300010045	Serpentine Soil	SGGPITDYGVLGENTIEVIASDTAGNASPAATTTLFIP*
Ga0126382_104668831	3300010047	Tropical Forest Soil	QSNIRYDIYVNGALEDVRFGSGGPITAYGEFGENTIAVIASDTAGNASPPATTTLFIP*
Ga0126382_106356142	3300010047	Tropical Forest Soil	DAQANIRYDVYVNGSFEDVRFGSGGPIIAYGVFGQNTIEVIASDTAGNASPPATTTLFIP
Ga0134080_103924312	3300010333	Grasslands Soil	IQWAQSTDDFDAQSNIRYDVYVNGSLEDIRFGSGGPGIAYGVFGENTIEVIASDTAGNASPPATTTLFIP*
Ga0134080_104226711	3300010333	Grasslands Soil	IRYDVYLNGVLQEVRFGSGGESIMYAELGENLIEVTATDTAGNTSAPATFTIFF*
Ga0126372_126548572	3300010360	Tropical Forest Soil	AQANIRYDVYINGAFEDVLFGSGGPIPDYGVLGDNTIEVIATDTAGNASPPATATIHLP*
Ga0126379_118778281	3300010366	Tropical Forest Soil	DDFDAQSNIRYDVYVNGTLEDFRFGSGGPIIAYGEFGQNTIEVIASDTAGNASPPATTTLFIP*
Ga0134128_112782511	3300010373	Terrestrial Soil	RQENIRYDVYLNGHLEEVRFGSGFISSIYGVSGENTIEVIASDTAGNASPPATTTIILP*
Ga0105239_101615662	3300010375	Corn Rhizosphere	FISSIYGVSGENTIEVIASDTAGNASPPATTTIILP*
Ga0134127_103225352	3300010399	Terrestrial Soil	GSGFISSIYGVSGENTIEVIASDTAGNASPPATTTIILP*
Ga0134127_120365221	3300010399	Terrestrial Soil	DVYLNGHLEEVRFGSGFISSIYGVSGENTIEVIASDTAGNASPPAMTTIHLP*
Ga0134127_120968282	3300010399	Terrestrial Soil	STDDFDAQANIRYDVYVNGRFEDVVFGSGGPRVIYGDFGDNLIEVFATDTAGNTSAAGTTRRFLP*
Ga0134127_121486331	3300010399	Terrestrial Soil	LQWTQSTDDFDAQANIRYDVYVNGRFEDVVFGSGGPRVIYGDFGNNLIEVFATDTAGNTSAAGTFTIFL*
Ga0134123_104223672	3300010403	Terrestrial Soil	WTQSTDDFDAQSNIRYDVYVNGVFQDVLFGSGGPRIIYSDFGENLIEIFATDTAGNTSAPATARVFF*
Ga0134123_115200552	3300010403	Terrestrial Soil	LSWTQSTDDFDAQANIRYDVYVNGRFEDVVFGSGGPRVIYGTDFGHNLIEVFANDTAGNTSAAGTFTIFL*
Ga0137333_10249783	3300011413	Soil	MQLSWTQSTDDFDAQANIRYDVYVNGRLEDIVFGSGGPRVIYGTGFGDNLIEVFATDTAGNTSAAGTFRIFL*
Ga0137314_11444662	3300011420	Soil	FDAQSNIRYDVYFNGVFSDVLFGSGGPSINYGEFGENIIEVFAIDTAGNVSEPAVTTLFIP*
Ga0137423_12292481	3300011430	Soil	NWTQSTDDFDAQSNIRYDVYFNGVFSDVLFGSGGPSINYGEFGENIIEVFAIDTAGNVSEPAVTTLFIP*
Ga0137427_100403103	3300011445	Soil	MQLSWTQSTDDFDVQANIRYDVYVNGRFEDVVFGSGGPRVIYGNFGDNLIEVFATDTAGNTSAAGTFRIFL*
Ga0137364_100551162	3300012198	Vadose Zone Soil	WWTQSTDDFDRQENIRYDVYLNGHLEEVRFGSGFISSIYGVTGENTIEVIASDTAGNASPPAKTTLFLP*
Ga0137382_106457231	3300012200	Vadose Zone Soil	AQSTDDFDAQSNIRYDVYVNGNFEDVRFGSGGPIIAYGVFGQNTIEVIASDTAGNASPPATTTLFIP*
Ga0137365_111591361	3300012201	Vadose Zone Soil	VYINGVWEDVRFGSGGPLIAYGVFGQNPIEVIALDTAGNASPPATTTLFIP*
Ga0137376_108664611	3300012208	Vadose Zone Soil	IRYDVYLNGVFQEVRFGSGGESIMYAEFGENLIEVTATDTAGNASAPATVTIFF*
Ga0137370_100172223	3300012285	Vadose Zone Soil	HLEEVRFGSGFISSIYGVAGENTIEVIASDTAGNASPPATTTLFLP*
Ga0137367_101790591	3300012353	Vadose Zone Soil	TETHISWTQSTDDFDAQSNIRYDVYVNGVLSDVLFGSGGESIVYAEFGENLIEVTATDTAGNTSAPVSFTIFF*
Ga0137366_102997181	3300012354	Vadose Zone Soil	IRFGSGGPGIAYGVFGENTIEVIASDTAGNASPPATTTLFIP*
Ga0137369_101631791	3300012355	Vadose Zone Soil	SNIRYDVYLNGVLEDVRFGSSGPITAYGVFGENTVEVIASDTAGNASPPATTTIFF*
Ga0137397_109156141	3300012685	Vadose Zone Soil	DVQSNIRYDVYVNGVWEDVRFGSGGPIIAYGVFGQNTIEVIASDTADNPSPPATTTLFIP
Ga0157310_104159322	3300012916	Soil	LEMQLSWAQSTDDFDAQANIRYDVYVNGRFEDVVFGSGGPRVIYGDFGHNLIQVFASDTAGNTSAAGTFTIFLP*
Ga0137404_100644074	3300012929	Vadose Zone Soil	NGSLEDIRFGSGGPSIAYGVFGENTIEVIASDTAGNASPPATTTLFIP*
Ga0137404_116449972	3300012929	Vadose Zone Soil	LNGHLEEVRFGSGFISSIYGVSGENTIEVIATDTAGNASPPATTTIHLP*
Ga0137404_116837312	3300012929	Vadose Zone Soil	IRYDVYLNGVLEDVRFGSGGPITAYGVLGENTIEVIASDTAGNASPPATTTIFF*
Ga0164301_118673232	3300012960	Soil	NGHLEEVRFGSGFISSIYGVSGENTIEVIASDTAGNASPPATTTIILP*
Ga0134087_105576622	3300012977	Grasslands Soil	KIRYDVYLNGALEDVRFGSGGPITAYGVFGENTVQVIASDTAGNASPPATTTLFIP*
Ga0164307_116102202	3300012987	Soil	DFDRQENIRYDVYVNGHLEEVRFGSGFISSIYGVSGENTIEVIASDTAGNASPPATTTIILP*
Ga0157371_107251851	3300013102	Corn Rhizosphere	EFQLWWTQSTDDFDRQENIRYDVYLNGHLEEVRFGSGFISSIYGVSGENTIEVIASDTAGNASPPATTTIILP*
Ga0157376_102496942	3300014969	Miscanthus Rhizosphere	SVYSIDGFTELQIQWTQSTDDFDAQANIRYDVYINGAFEDVLFGSGGPIPDYGVLGDNTIEVIATDTAGNASPPATATIHLP*
Ga0137403_110428451	3300015264	Vadose Zone Soil	IRYDVYLNGHLEEVRFGSGFISSIYGVSGENTIEVIATDTAGNASPPATTTIHLP*
Ga0132258_103437641	3300015371	Arabidopsis Rhizosphere	WTQSTDEFDAQANIRYDVYVNGALEDFRFCSGGPIIAYGEFGQNTIEVIASDTAGNASPPATTTLFIP*
Ga0132258_117610272	3300015371	Arabidopsis Rhizosphere	WTQSTDDFDAQSNIRYDVYVNGILADILFGSGGPSIVYAEFGDNIIEVFATDTAGNLSEAAVTFVSFP*
Ga0132256_1005943591	3300015372	Arabidopsis Rhizosphere	ENIRYDVYLNGHLEEVRFGSGFISSIYGVSGENTIEVIASDTAGNASPPATTTIILP*
Ga0132256_1008053901	3300015372	Arabidopsis Rhizosphere	LELQLWWTQSTDDFDRQENIRYDVYLNGHLEEVRFGSGFISSIYGVSGENTIEVIASDTAGNASPPATTTIILP*
Ga0132256_1032176571	3300015372	Arabidopsis Rhizosphere	RQENIRYDVYLNGHLEEVRFGSGFISSIYGVSGENTIEVIATDTAGNASPPATATIHLP*
Ga0184619_101317891	3300018061	Groundwater Sediment	LRWTQSTDDFDAQSNIRYDVYVNGVWADVLFGSGGPSIIYADFGNNLIEVFATDTAGNTSAPATVTLFF
Ga0184635_100246211	3300018072	Groundwater Sediment	VRFGSGGPTTAYGVVGENTIEVIASDTAGNAAPPGIFTIFLP
Ga0184624_100282192	3300018073	Groundwater Sediment	FDAQPNIRYDVYVNGVFQDVLFGSGGPIPEYGVFGENTIEVIATDTAGNASPPATTTLFL
Ga0190265_102879173	3300018422	Soil	TNLGAFDHSSGDNEFELSWTQSTDDFDRQENIRYDVYVNGVLEEVRFGSSFISSIYGKSGDNLIEVYATDTAGNTSPPATATITLF
Ga0066667_119005291	3300018433	Grasslands Soil	YVNGTLEDVRFGSGGPSIAYGVFGDNTIEVIASDTAGNASPPATTTLFIP
Ga0193705_10085651	3300019869	Soil	QSNIRYDVYVNGGLEDVRFGSGGPIIAYGVFGDNTIEVIASDTAGNASPPATTTLFIP
Ga0193715_10775701	3300019878	Soil	INGTFEDVRFGSGGPITDYGVFGQNTIEVIASDTAGNASPAATTTLFIP
Ga0193723_10635251	3300019879	Soil	GGPITDYGVFGQNTIEVIASDTAGNASPAATTTLFIP
Ga0193707_11781582	3300019881	Soil	TDDFDAQANIRYDVYVNGSFEDVRFGSGGPLIAYGVFGDNTIEVIATDTAGNASPPATTTLFIP
Ga0193725_11218571	3300019883	Soil	DVYLNGHLEEVRFGSGFISSIYGVSGENTIEVIATDTAGNASPPATTTLFLP
Ga0193727_11719791	3300019886	Soil	NIRYDVYLNGHLEEVRFGSGFISSIYGVSGENTIEVIATDTAGNASPPATTTLFLP
Ga0179594_102963901	3300020170	Vadose Zone Soil	DGSTEMQIQWAQSTDDFDVPSNIRYDVYINGVWEDVRFGSGGPLIAYGVFGQNTIEVIALDTAGNASPPATTTLFIP
Ga0193719_100492611	3300021344	Soil	DFDAQINIRYDVYVNGAFQEARFGSGGESIVYAEFGENLIEVTATDTAGNTSAPATFTIF
Ga0193719_100798262	3300021344	Soil	DDFDRQENIRYDVYLNGHLEEVRFGSGFISSIYGVSGENTIEVIATDTAGNASPPATTTLFLP
Ga0193719_102290582	3300021344	Soil	NIRYDVYLNGHLEEVRFGSGFISSIYGVSGENTIEVIASDTAGNASPPATTTIILP
Ga0193737_10219432	3300021972	Soil	RYDVYVNGVLEEIRFGSGFISSIYGEWGDNLIEVFATDTAGNRSARGTTTILF
Ga0224452_10574671	3300022534	Groundwater Sediment	GPIIAYGVFGDNTIEVIASDTAGNASPPATTTLFIP
Ga0224452_12779961	3300022534	Groundwater Sediment	NIRYDVYVNGVLSDVLFGSGGESIVYAEFGNNTIAVIASDTAGNASAPATFTIFF
Ga0222622_100728191	3300022756	Groundwater Sediment	LNGHLEEVRFGSGFISSIYGVSGENTIEVIASDTAGNASPPATTTLFLP
Ga0222622_107793431	3300022756	Groundwater Sediment	QVSWTQSIDDFDAQSNIRYDFYLNGVLQEVLFGSGRPSTVYAEFGENTIEVTATDTAGNTSAPATVKIFF
Ga0207680_107833861	3300025903	Switchgrass Rhizosphere	RYDVYINGVFEDVRFGSRGPITDYGVLGENTIEVIASDTAGNASAPATTTISLP
Ga0207701_109551512	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VQANIRYDVYINGAFADVLFGSGGPIPDYGVLGDNTIEVIATDTAGNASPPATASIHLP
Ga0207690_116334561	3300025932	Corn Rhizosphere	QIQWSQSTDDFDAQANIRYDVYINGVFEDVLFGSGGPIPDYGVLGDNTIEVIATDTAGNASPPATTTIHLP
Ga0207706_103193951	3300025933	Corn Rhizosphere	FDRQENIRYDVYLNGHLEEVRFGSGFISSIYGVSGENTIEVIASDTAGNASPPAMTTIHL
Ga0207712_100636781	3300025961	Switchgrass Rhizosphere	LNGHLEEVRFGSGFISSIYGVSGENTIEVIASDTAGNASPPATTTIILP
Ga0207668_111308031	3300025972	Switchgrass Rhizosphere	FGSGFISSIYGVSGENTIEVIASDTAGNASPPATTTIILP
Ga0207677_118696971	3300026023	Miscanthus Rhizosphere	QSTDDFDRQENIRYDVYLNGHLEEVRFGSGFISSIYGVSGENTIEVIASDTAGNASPPATTTIILP
Ga0207708_107929122	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	IRFGSGGPITAYGQPGQNTIQVIASDTAGNASAPATITIFL
Ga0207648_107952522	3300026089	Miscanthus Rhizosphere	MQVSWTQSTDDFDAPENIRYDVYVNGSLEDVVFGSGGPRVIYGDAGHNLIEVFATDTSGNSSAAGATTISLP
Ga0257146_10678031	3300026374	Soil	QSNIRYDVYVNGALEDFRFGSGGPIIAYGVFGQNTIEVIASDTAGNAAPPATTTLFIL
Ga0208185_10462272	3300027533	Soil	FGDLEMELSWGQSTDDFDAQANIRYDVYVNGRFEDVVFGSGGPRVIYGDFGDNLIEVFATDTAGNTSAAGTTRIFLP
Ga0307313_101087961	3300028715	Soil	GDGSTETQVSWTQSTDDFDAQSNIRYDFYLNGVLQEVLFGSGRPSTVYAEFGENTIEVTATDTAGNTSAPATVTIFF
Ga0307282_103030822	3300028784	Soil	STETQVSWTQSTDDFDAQSNIRYDFYLNGVLQEVLFGSGRPSTVYAEFGENTIEVTATDTAGNTSAPATVTIFF
Ga0307469_101112191	3300031720	Hardwood Forest Soil	VYLNGHLEEVRFGSGFISSIYGVSGENTIEVIATDTAGNASPPATTTLFLP
Ga0310890_103227561	3300032075	Soil	LNGHLEEVRFGSGFISSIYGVSGENTIEVIATDTAGNASPPATTTLFLP
Ga0310890_113568721	3300032075	Soil	GPIVAYGEFGQNTVQVVASDTAGNASAPATTTVLLP
Ga0315912_112784491	3300032157	Soil	STDDFDAQANIRYDVYVNGRLEDWVFGSGGPRIIYSDFGQNLIEVFATDTAGNTSAAGTTMVFF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064217

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences