Metagenome / Metatranscriptome Family F064202

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F064202
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	46 residues
Representative Sequence	YFTKVNDMVEEIKKRSDVDLINYEYSYTGIHEDTDLKHFDITRN
Number of Associated Samples	108
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.67 %
% of genes from short scaffolds (< 2000 bps)	89.92 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (37.984 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater (22.481 % of family members)
Environment Ontology (ENVO)	Unclassified (80.620 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (91.473 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.67% β-sheet: 0.00% Coil/Unstructured: 83.33%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF12705	PDDEXK_1	7.75
PF01381	HTH_3	3.88
PF00170	bZIP_1	1.55
PF07716	bZIP_2	1.55
PF11753	DUF3310	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.02 %
Unclassified	root	N/A	37.98 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	46.51 %
Unclassified	root	N/A	37.98 %
cellular organisms	root	All Organisms → cellular organisms	15.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.98 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	32.56 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	15.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.88 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	3.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.98 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	32.56 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	8.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.88 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	3.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.98 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	32.56 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	8.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.88 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	3.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.98 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	32.56 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	8.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.88 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	3.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.98 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	8.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.88 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	3.10 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	3.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.98 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	8.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.88 %
uncultured Mediterranean phage uvDeep-CGR2-AD8-C175	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD8-C175	3.10 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	3.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.98 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	8.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.88 %
uncultured Mediterranean phage uvDeep-CGR2-AD8-C175	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD8-C175	3.10 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	3.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.98 %
unclassified Flavobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae	8.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.88 %
uncultured Mediterranean phage uvDeep-CGR2-AD8-C175	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD8-C175	3.10 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	3.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.98 %
Flavobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	8.53 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.88 %
uncultured Mediterranean phage uvDeep-CGR2-AD8-C175	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD8-C175	3.10 %
uncultured marine virus	species	All Organisms → Viruses → environmental samples → uncultured marine virus	3.10 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000101\|DelMOSum2010_c10103298	All Organisms → Viruses → environmental samples → uncultured marine virus	1176	Open in IMG/M
3300000116\|DelMOSpr2010_c10142685	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	832	Open in IMG/M
3300000116\|DelMOSpr2010_c10150722	Not Available	797	Open in IMG/M
3300001346\|JGI20151J14362_10152307	Not Available	691	Open in IMG/M
3300001347\|JGI20156J14371_10082872	Not Available	1115	Open in IMG/M
3300001353\|JGI20159J14440_10021290	All Organisms → Viruses → Predicted Viral	3031	Open in IMG/M
3300001353\|JGI20159J14440_10182975	Not Available	586	Open in IMG/M
3300001355\|JGI20158J14315_10058908	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1549	Open in IMG/M
3300001355\|JGI20158J14315_10115307	Not Available	886	Open in IMG/M
3300001450\|JGI24006J15134_10077110	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300001450\|JGI24006J15134_10140038	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	807	Open in IMG/M
3300001748\|JGI11772J19994_1017210	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1102	Open in IMG/M
3300006027\|Ga0075462_10141670	Not Available	736	Open in IMG/M
3300006027\|Ga0075462_10226074	Not Available	558	Open in IMG/M
3300006737\|Ga0098037_1121836	Not Available	891	Open in IMG/M
3300006737\|Ga0098037_1131051	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	852	Open in IMG/M
3300006749\|Ga0098042_1171872	Not Available	525	Open in IMG/M
3300006793\|Ga0098055_1294178	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	607	Open in IMG/M
3300006802\|Ga0070749_10223152	All Organisms → Viruses → environmental samples → uncultured marine virus	1074	Open in IMG/M
3300006869\|Ga0075477_10083807	All Organisms → Viruses → environmental samples → uncultured marine virus	1379	Open in IMG/M
3300006870\|Ga0075479_10038189	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2071	Open in IMG/M
3300006922\|Ga0098045_1125654	Not Available	597	Open in IMG/M
3300006924\|Ga0098051_1159260	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	595	Open in IMG/M
3300007236\|Ga0075463_10119692	Not Available	850	Open in IMG/M
3300007276\|Ga0070747_1037851	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1886	Open in IMG/M
3300007346\|Ga0070753_1217860	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	701	Open in IMG/M
3300007540\|Ga0099847_1013182	All Organisms → Viruses	2725	Open in IMG/M
3300008220\|Ga0114910_1222035	Not Available	513	Open in IMG/M
3300009027\|Ga0102957_1282264	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	605	Open in IMG/M
3300009027\|Ga0102957_1288773	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	599	Open in IMG/M
3300009071\|Ga0115566_10158694	All Organisms → Viruses → Predicted Viral	1406	Open in IMG/M
3300009433\|Ga0115545_1208588	Not Available	664	Open in IMG/M
3300009449\|Ga0115558_1300905	Not Available	638	Open in IMG/M
3300009476\|Ga0115555_1088049	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1345	Open in IMG/M
3300009496\|Ga0115570_10342506	All Organisms → Viruses	641	Open in IMG/M
3300009498\|Ga0115568_10103759	All Organisms → Viruses → environmental samples → uncultured marine virus	1406	Open in IMG/M
3300009507\|Ga0115572_10407144	All Organisms → Viruses	761	Open in IMG/M
3300009790\|Ga0115012_11927705	Not Available	522	Open in IMG/M
3300010150\|Ga0098056_1197717	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	672	Open in IMG/M
3300010300\|Ga0129351_1210600	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	752	Open in IMG/M
3300010368\|Ga0129324_10019850	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3333	Open in IMG/M
3300013195\|Ga0116815_1041933	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	633	Open in IMG/M
3300016737\|Ga0182047_1200772	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	790	Open in IMG/M
3300016749\|Ga0182053_1048982	All Organisms → cellular organisms → Bacteria	1977	Open in IMG/M
3300017697\|Ga0180120_10189876	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	855	Open in IMG/M
3300017727\|Ga0181401_1035953	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1403	Open in IMG/M
3300017731\|Ga0181416_1014244	All Organisms → cellular organisms → Bacteria	1874	Open in IMG/M
3300017731\|Ga0181416_1095665	Not Available	707	Open in IMG/M
3300017740\|Ga0181418_1121953	Not Available	630	Open in IMG/M
3300017741\|Ga0181421_1136668	Not Available	634	Open in IMG/M
3300017741\|Ga0181421_1164205	Not Available	573	Open in IMG/M
3300017743\|Ga0181402_1118415	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	679	Open in IMG/M
3300017745\|Ga0181427_1031496	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1321	Open in IMG/M
3300017745\|Ga0181427_1114799	Not Available	658	Open in IMG/M
3300017748\|Ga0181393_1131798	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD8-C175	630	Open in IMG/M
3300017750\|Ga0181405_1018919	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1922	Open in IMG/M
3300017750\|Ga0181405_1053164	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1064	Open in IMG/M
3300017752\|Ga0181400_1009285	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3457	Open in IMG/M
3300017753\|Ga0181407_1138720	Not Available	603	Open in IMG/M
3300017756\|Ga0181382_1090570	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	836	Open in IMG/M
3300017764\|Ga0181385_1033026	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300017764\|Ga0181385_1268048	Not Available	510	Open in IMG/M
3300017765\|Ga0181413_1072170	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD8-C175	1059	Open in IMG/M
3300017765\|Ga0181413_1137200	Not Available	739	Open in IMG/M
3300017765\|Ga0181413_1259609	Not Available	511	Open in IMG/M
3300017767\|Ga0181406_1063234	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1136	Open in IMG/M
3300017769\|Ga0187221_1170951	Not Available	637	Open in IMG/M
3300017771\|Ga0181425_1108899	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	886	Open in IMG/M
3300017771\|Ga0181425_1123481	Not Available	826	Open in IMG/M
3300017771\|Ga0181425_1138609	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	774	Open in IMG/M
3300017781\|Ga0181423_1065402	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1442	Open in IMG/M
3300017782\|Ga0181380_1217998	Not Available	637	Open in IMG/M
3300017786\|Ga0181424_10066081	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1562	Open in IMG/M
3300017952\|Ga0181583_10482718	Not Available	760	Open in IMG/M
3300017956\|Ga0181580_10337663	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1017	Open in IMG/M
3300017986\|Ga0181569_10479808	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	843	Open in IMG/M
3300018418\|Ga0181567_10225950	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1276	Open in IMG/M
3300018420\|Ga0181563_10071516	All Organisms → cellular organisms → Bacteria	2353	Open in IMG/M
3300019756\|Ga0194023_1045727	Not Available	882	Open in IMG/M
3300019765\|Ga0194024_1078721	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	744	Open in IMG/M
3300020174\|Ga0181603_10134229	Not Available	1094	Open in IMG/M
3300020472\|Ga0211579_10597260	Not Available	619	Open in IMG/M
3300020810\|Ga0181598_1040661	All Organisms → Viruses	2371	Open in IMG/M
3300021347\|Ga0213862_10083464	Not Available	1127	Open in IMG/M
3300021373\|Ga0213865_10281656	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	783	Open in IMG/M
3300021958\|Ga0222718_10098687	All Organisms → cellular organisms → Bacteria	1726	Open in IMG/M
3300021959\|Ga0222716_10596935	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	603	Open in IMG/M
3300021964\|Ga0222719_10757667	All Organisms → Viruses	540	Open in IMG/M
3300022050\|Ga0196883_1020018	Not Available	804	Open in IMG/M
3300022053\|Ga0212030_1031452	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	738	Open in IMG/M
3300022053\|Ga0212030_1056109	Not Available	560	Open in IMG/M
3300022065\|Ga0212024_1082030	Not Available	574	Open in IMG/M
3300022068\|Ga0212021_1001736	All Organisms → Viruses → Predicted Viral	2681	Open in IMG/M
3300022068\|Ga0212021_1066507	Not Available	738	Open in IMG/M
3300022071\|Ga0212028_1104516	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	526	Open in IMG/M
3300022074\|Ga0224906_1051531	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1319	Open in IMG/M
3300022183\|Ga0196891_1047892	Not Available	780	Open in IMG/M
3300023180\|Ga0255768_10263989	Not Available	989	Open in IMG/M
3300024344\|Ga0209992_10348681	Not Available	595	Open in IMG/M
3300025070\|Ga0208667_1007871	Not Available	2626	Open in IMG/M
3300025098\|Ga0208434_1115017	All Organisms → Viruses	512	Open in IMG/M
3300025099\|Ga0208669_1016636	All Organisms → Viruses → Predicted Viral	1945	Open in IMG/M
3300025101\|Ga0208159_1072693	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD8-C175	663	Open in IMG/M
3300025128\|Ga0208919_1149908	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	723	Open in IMG/M
3300025168\|Ga0209337_1141273	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1056	Open in IMG/M
3300025543\|Ga0208303_1008657	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3244	Open in IMG/M
3300025543\|Ga0208303_1053961	Not Available	965	Open in IMG/M
3300025632\|Ga0209194_1011156	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3488	Open in IMG/M
3300025632\|Ga0209194_1092333	Not Available	779	Open in IMG/M
3300025645\|Ga0208643_1128886	Not Available	662	Open in IMG/M
3300025646\|Ga0208161_1031327	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300025674\|Ga0208162_1044075	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium	1536	Open in IMG/M
3300025704\|Ga0209602_1139925	All Organisms → Viruses	792	Open in IMG/M
3300025759\|Ga0208899_1046385	All Organisms → cellular organisms → Bacteria	1893	Open in IMG/M
3300025803\|Ga0208425_1052310	Not Available	1015	Open in IMG/M
3300025816\|Ga0209193_1163907	Not Available	507	Open in IMG/M
3300025853\|Ga0208645_1121148	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1043	Open in IMG/M
3300025881\|Ga0209309_10158682	All Organisms → Viruses → Predicted Viral	1137	Open in IMG/M
3300025886\|Ga0209632_10230796	All Organisms → Viruses	959	Open in IMG/M
3300025889\|Ga0208644_1045626	All Organisms → cellular organisms → Bacteria	2474	Open in IMG/M
3300025889\|Ga0208644_1323711	Not Available	601	Open in IMG/M
3300025890\|Ga0209631_10234750	Not Available	923	Open in IMG/M
3300026138\|Ga0209951_1077604	Not Available	694	Open in IMG/M
3300027859\|Ga0209503_10063936	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1693	Open in IMG/M
3300029309\|Ga0183683_1009399	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2572	Open in IMG/M
3300031851\|Ga0315320_10766231	Not Available	610	Open in IMG/M
3300032088\|Ga0315321_10205897	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage uvDeep-CGR2-AD8-C175	1291	Open in IMG/M
3300034374\|Ga0348335_084205	All Organisms → Viruses	1060	Open in IMG/M
3300034375\|Ga0348336_119127	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	849	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	95.35%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	3.10%
Freshwater	Environmental → Aquatic → Freshwater	1.55%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	26.36%
Strait	Environmental → Aquatic → Marine → Strait	22.48%
Oceanic	Environmental → Aquatic → Marine → Oceanic	14.73%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	9.30%
Pelagic	Environmental → Aquatic → Marine → Pelagic	9.30%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	8.53%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	3.10%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.88%
River	Environmental → Aquatic → Freshwater → River	1.55%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	26.36%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	22.48%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	14.73%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	9.30%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	8.53%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	7.75%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.78%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	0.78%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	22.48%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	22.48%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	13.95%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	9.30%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	7.75%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	6.20%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.33%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.33%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	2.33%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	2.33%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.55%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.55%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.55%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.55%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.78%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.78%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001347	Pelagic Microbial community sample from North Sea - COGITO 998_met_06	Environmental	Open in IMG/M
3300001353	Pelagic Microbial community sample from North Sea - COGITO 998_met_09	Environmental	Open in IMG/M
3300001355	Pelagic Microbial community sample from North Sea - COGITO 998_met_08	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001748	Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m)	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300006922	Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300007236	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300008220	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908	Environmental	Open in IMG/M
3300009027	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009449	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426	Environmental	Open in IMG/M
3300009476	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009498	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010150	Marine viral communities from the Subarctic Pacific Ocean - 17B_ETSP_OMZ_AT15314_CsCl metaG	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300013195	Marine hypoxic microbial communities from the Gulf of Mexico, USA - 10m_Station7_GOM_Metagenome	Environmental	Open in IMG/M
3300016737	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011506CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016749	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011512AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017740	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13	Environmental	Open in IMG/M
3300017741	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017745	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15	Environmental	Open in IMG/M
3300017748	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017752	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018420	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019756	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MG	Environmental	Open in IMG/M
3300019765	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MG	Environmental	Open in IMG/M
3300020174	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041409US metaG (spades assembly)	Environmental	Open in IMG/M
3300020472	Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)	Environmental	Open in IMG/M
3300020810	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)	Environmental	Open in IMG/M
3300021347	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266	Environmental	Open in IMG/M
3300021373	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022050	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)	Environmental	Open in IMG/M
3300022053	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)	Environmental	Open in IMG/M
3300022065	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)	Environmental	Open in IMG/M
3300022068	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)	Environmental	Open in IMG/M
3300022071	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300022183	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300024344	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)	Environmental	Open in IMG/M
3300025070	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025098	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)	Environmental	Open in IMG/M
3300025099	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025543	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025632	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)	Environmental	Open in IMG/M
3300025645	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025704	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025816	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300025881	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes)	Environmental	Open in IMG/M
3300025886	Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300025890	Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)	Environmental	Open in IMG/M
3300026138	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300027859	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300029309	Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M
3300032088	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515	Environmental	Open in IMG/M
3300034374	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)	Environmental	Open in IMG/M
3300034375	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_101032981	3300000101	Marine	NKVNEMIEEIKKRQDVDLINYEYSYTGIHEDTDLKYFDIVRH*
DelMOSpr2010_101426853	3300000116	Marine	ILMVALLILNFIDTFPSFPKVHDMISQIKKRDDVELINYEYSYTGIHEDTDLKYFEITLN
DelMOSpr2010_101507221	3300000116	Marine	IDTFPYFTKVNDMVEEIKKRSDVDLINYEYSYTGIHEDTDLKHFDITRN*
JGI20151J14362_101523071	3300001346	Pelagic Marine	NNPYGSFVSFRFIDTYPYFTKVNEMVEEIKKRSDVDLINYEYTYKQIHKNTDLKHLDFTKN*
JGI20156J14371_100828721	3300001347	Pelagic Marine	FIDTYPYFTKVNEMVEEIKRRSDVDLINYEYTYKQIHKNTDLKHLDFTKN*
JGI20159J14440_100212909	3300001353	Pelagic Marine	FIDTYPNFPKVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLKYFDLTRH*
JGI20159J14440_101829752	3300001353	Pelagic Marine	DTYPYFTKVNEMVEEIKRRSDVDLINYEYTYKQIHKNTDLKHLDFTKN*
JGI20158J14315_100589081	3300001355	Pelagic Marine	IAEIKKRGDVDLINFEYSYTGIHEDTDLKYFDVTRH*
JGI20158J14315_101153074	3300001355	Pelagic Marine	PYGSYVSFRFIDTYPYFTKVNEMVEEIKRRSDVDLINYEYTYKQIHKNTDIKQFDFTKN*
JGI24006J15134_100771104	3300001450	Marine	MRWSKKLKERSDVDLINYEYTYKKIHKNTDLKYFDLTRN*
JGI24006J15134_101400381	3300001450	Marine	PYGSYVSFTFIDTYPYFTKVNEMVEEIKRRSDVDLINYEYTYKKIHKNTDLKYFDFTKN*
JGI11772J19994_10172104	3300001748	Saline Water And Sediment	KVNEMVSQIKRRTDVDLIDYEYTYTGIHEDTDLTHLEITRN*
Ga0075462_101416701	3300006027	Aqueous	FPKVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLQYFDVTRH*
Ga0075462_102260741	3300006027	Aqueous	DMVEEIKKRSDVDLINYEYSYTGIHEDTDLKHFDITRN*
Ga0098037_11218362	3300006737	Marine	MVEEVKKRNDVDLINYEYSYTGIHEDTDIKHFDITRN*
Ga0098037_11310514	3300006737	Marine	TKVNEMVEEIKRRSDVDLINYEYSYTGIHEDTDIKHFDFTKN*
Ga0098042_11718722	3300006749	Marine	IAEIKKRGDVDLINFEYSYTGIHEDTDLQYFDVTRH*
Ga0098055_12941783	3300006793	Marine	NEMVEEIKRRSDVDLINYEYSYTGIHEDTDIKHFDFTKN*
Ga0070749_102231523	3300006802	Aqueous	EIKKRTDVDLVDYEFTYTGIHEDTDLTHLEITRN*
Ga0075477_100838074	3300006869	Aqueous	DTFPYFTKVNDMVEEIKKRSDVDLINYEYSYTGIHEDTDLKHFDITRN*
Ga0075479_100381895	3300006870	Aqueous	IDTFPSFPKVHDMISQIKKRDDVELINYQYSYSGIHEDTDLKYFEITLN*
Ga0098045_11256542	3300006922	Marine	LETSNNPYGSYVSFRFIDTYPYFTKVNEMVEEIKRRSDVDLINYEYTYKHIHKDTDIKNLDFTKN*
Ga0098051_11592603	3300006924	Marine	EEIKRRSDVDLINYEYSYTGIHEDTDIKHFDFTKN*
Ga0075463_101196924	3300007236	Aqueous	YPNFPKVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLKYFDVTRH*
Ga0070747_10378511	3300007276	Aqueous	YFTKVNEMVEEIKRRSDVDLINYEYTYKQIHKNTDIKQFDFTKN*
Ga0070753_12178602	3300007346	Aqueous	TFPSFPKLNDMIFEIKKRHDVDLINYEYSYTGIHEDTDLQYFDIVRN*
Ga0099847_10131828	3300007540	Aqueous	VSFRFIDTYPYFTKVNEMVEEIKRRSDVDLINYEYTYKQIHKNTDLKHFDFTKN*
Ga0114910_12220352	3300008220	Deep Ocean	PKVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLQYFDLTRH*
Ga0102957_12822642	3300009027	Pond Water	EAPNNPYGSYVCFRFVDVFPYFTKVNEMVAEIKSRNDVELIDYEYSYTGIHEDTDLSNLEVTRN*
Ga0102957_12887732	3300009027	Pond Water	GSYIHFKFIDTFPSFPKLNDMIFEIKKRHDVDLINYEYSYTGIHEDTDLKYFDIVRN*
Ga0115566_101586941	3300009071	Pelagic Marine	PNFPKVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLKYFDLTRH*
Ga0115545_12085881	3300009433	Pelagic Marine	ITDLELQLETSNNPYGSYVSFRFIDTYPYFTKVNEMVEEIKRRSDVDLINYEYTYKQIHKNTDIKQFDFTKN*
Ga0115558_13009052	3300009449	Pelagic Marine	EEIKRRSDVDLINYEYTYKQIHKNTDIKQFDFTKN*
Ga0115555_10880491	3300009476	Pelagic Marine	KVNEMVEEIKKRSDVDLINYEYTYKQIHKDTDLQHLDFTKN*
Ga0115570_103425061	3300009496	Pelagic Marine	VNNMIEEIKKREDVDLINYEYSYTSIKKDTDLKYFEITRN*
Ga0115568_101037594	3300009498	Pelagic Marine	NEMVEEIKRRSDVDLINYEYTYKQIHKDTDIKHLDFTKN*
Ga0115572_104071441	3300009507	Pelagic Marine	TFPHFTKVNNMIEEIKKREDVDLINYEYSYTSIKKDTDLKYFEITRN*
Ga0115012_119277052	3300009790	Marine	EIKKRGDVDLINFEYSYTGIHEDTDLQYFDVTRH*
Ga0098056_11977171	3300010150	Marine	NNPYGSYVSFRFIDTYPYFTKVNEMVEEIKRRSDVDLINYEYSYTGIHEDTDIKHFDFTKN*
Ga0129351_12106003	3300010300	Freshwater To Marine Saline Gradient	LNDMIFEIKKRHDVDLINYEYSYTGIHEDTDLQYFDIVRN*
Ga0129324_100198501	3300010368	Freshwater To Marine Saline Gradient	MIAEIKKRGDVDLINFEYSYTGIHEDTDLKYFDVTRH*
Ga0116815_10419332	3300013195	Marine	VHEVKSRTDVELINFEYSYTGIHEDTDLKHFDITRN*
Ga0182047_12007723	3300016737	Salt Marsh	FKFIDTFPSFPKLNDMIFEIKKRHDVDLINYEYSYTGIHEDTDLQYFDIVRN
Ga0182053_10489825	3300016749	Salt Marsh	IFEIKKRHDVDLINYEYSYTGIHEDTDLQYFDIVRN
Ga0180120_101898763	3300017697	Freshwater To Marine Saline Gradient	DTYPYFTKVNEMVEEIKRRSDVDLINYEYTYKQIHKNTDLKHFDLTRN
Ga0181401_10359535	3300017727	Seawater	YGSYISFRFIDTYPYFTKVNEMVEEIKRRGDVDLINYEYTYKQIHKDTDIKHFDITKN
Ga0181416_10142441	3300017731	Seawater	DTFPSFPKLNDMIFEIKKRHDVDLINYEYSYTGIHEDTDLKYFDIVRN
Ga0181416_10956651	3300017731	Seawater	DMIAEIKKRGDVDLINFEYSYTGIHEDTDLKYFDITLN
Ga0181418_11219531	3300017740	Seawater	KFIDTYPNFPKVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLQYFDLTRH
Ga0181421_11366682	3300017741	Seawater	FIDTYPNFPKVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLKYFDVTRH
Ga0181421_11642052	3300017741	Seawater	FTKVNEMVEEIKRRSDVDLINYEYTYKQIHKNTDIKQFDFTKN
Ga0181402_11184151	3300017743	Seawater	TFPYFTKVNEMVEEIKRRSDVDLINYEYTYKQIHKNTDLKQFDFTKN
Ga0181427_10314961	3300017745	Seawater	RCIDNFPYFKKVNEMVEEIKRRNDVDLINYEYSYTGIHEDTDIKHFDITRN
Ga0181427_11147991	3300017745	Seawater	DMIAEIKKRGDVDLINFEYSYTGIHEDTDLKYFDVTRH
Ga0181393_11317982	3300017748	Seawater	NEMVEEIKRRSDVDLINYEYTYKQIHKNTDIKQFDFTKN
Ga0181405_10189191	3300017750	Seawater	MIAEIKKRGDVDLINFEYSYTGIHEDTDLKYFDITLN
Ga0181405_10531644	3300017750	Seawater	MVEEIKRRSDVDLINYEYTYKQIHKNTDLKQFDFTKN
Ga0181400_100928511	3300017752	Seawater	KVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLKYFDVTRH
Ga0181407_11387202	3300017753	Seawater	YPNFPKVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLKYFDVTRH
Ga0181382_10905703	3300017756	Seawater	DSYFAKVNEMVVELKRRSDVDLVHYEYTYKQIHKDTDIKHFDITKN
Ga0181385_10330264	3300017764	Seawater	YGSFVNFKFIDTFPSFPKLNDMIFEIKKRHDVDLINYEYSYTGIHEDTDLKYFDIVRN
Ga0181385_12680482	3300017764	Seawater	IAEIKKRGDVDLINFEYSYTGIHEDTDLQYFDVTRH
Ga0181413_10721704	3300017765	Seawater	YFTKVNEMVEEIKRRSDVDLINYEYSYTGIHEDTDIKHFDFTKN
Ga0181413_11372001	3300017765	Seawater	PYFTKVNEMIEEIKKRDDVELVKYEYTYTGIHEDTDLKFFDIVKN
Ga0181413_12596092	3300017765	Seawater	KVNDMIAEIKKRGDVDLINFEYSYTGIYEDTDLQYFDVTRH
Ga0181406_10632341	3300017767	Seawater	NEMVEEIKRRSDVDLINYEYTYKQIHKNTDIKHLDFTKN
Ga0187221_11709512	3300017769	Seawater	TSNNPYGSFINFKFIDLYPHFTKVNDMIAEIKKRGDVDLINFEYSYTGIYEDTDLQYFDVTRH
Ga0181425_11088993	3300017771	Seawater	TYPYFTKVNEMVEEIKKRSDVDLINYEYTFKQIHKNTDLKHFDFTKN
Ga0181425_11234814	3300017771	Seawater	PKVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLQYFDVTRH
Ga0181425_11386091	3300017771	Seawater	YFTKVNEMIEEIKKRDDVELVKYEYSYTGIHEDTDLKHFDFTKN
Ga0181423_10654021	3300017781	Seawater	SFVNFKFIDTYPNFPKVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLKYFDVTRH
Ga0181380_12179981	3300017782	Seawater	KVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLQYFDVTRH
Ga0181424_100660811	3300017786	Seawater	PYFTKVNEMVEEIKKRSDVDLINYEYTYKQINKNTDLKHFDFTKN
Ga0181583_104827182	3300017952	Salt Marsh	FPYFTKVNDMVEEIKKRSDVDLINYEYSYTGIHEDTDLKHFDITRN
Ga0181580_103376631	3300017956	Salt Marsh	KFIDTFPSFPKVHDMISQIKKRDDVELINYEYSYTGIHEDTDLKYFEITLN
Ga0181569_104798083	3300017986	Salt Marsh	NPYGSYVSFRFIDTFPYFTKVNEMVEEVRKRSDVELINYEYSYTGIHEDTDLKFFDVTIN
Ga0181567_102259504	3300018418	Salt Marsh	FIDTFPYFTKVNEMVEEVRKRSDVELINYEYSYHGIHEDTDLKFFDVTIN
Ga0181563_100715161	3300018420	Salt Marsh	PSFPKLNDMIFEIKKRHDVDLINYEYSYTGIHEDTDLQYFDIVRN
Ga0194023_10457273	3300019756	Freshwater	IDTFPYFTKVNDMVEEIKKRSDVDLINYEYSYTGIHEDTDLKHFDITRN
Ga0194024_10787211	3300019765	Freshwater	FKFIDTFPSFPKVHDMISQIKKRDDVELINYEYSYTGIHEDTDLKYFEITLN
Ga0181603_101342293	3300020174	Salt Marsh	YVCFRFIDTFPSFPKVNEMVSEIKSRNDVELIDYEYSYTGIHEDTDLSNLEVTRN
Ga0211579_105972602	3300020472	Marine	NFPKVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLQYFDLTRH
Ga0181598_10406611	3300020810	Salt Marsh	TKVNDMVEEIKKRSDVDLINYEYSYTGIHEDTDLKHFDITRN
Ga0213862_100834645	3300021347	Seawater	FIDTYPNFPKVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLQYFDVTRH
Ga0213865_102816563	3300021373	Seawater	KLNDMIFEIKKRHDVDLINYEYSYTGIHEDTDLQYFDIVRN
Ga0222718_100986874	3300021958	Estuarine Water	KVNEMIAEIKKREDVDLIDYEYSYTGIHEDTDISNLEITRN
Ga0222716_105969351	3300021959	Estuarine Water	FTKMNQMISEIKKRDDVELINYEYSYTGIHEDTDLKYFEITLN
Ga0222719_107576672	3300021964	Estuarine Water	DTFPHFTKVNNMIEEIKKREDVDLINYEYSYTSIKKDTDLKYFEITRN
Ga0196883_10200181	3300022050	Aqueous	FIDTFPYFTKVNDMVEEIKKRSDVDLINYEYSYTGIHEDTDLKHFDITRN
Ga0212030_10314523	3300022053	Aqueous	MVSEIKKRTDVDLVDYEFTYTGIHEDTDLTHLVITRN
Ga0212030_10561091	3300022053	Aqueous	VNEMVEEIKKRSDVDLINYEYTYKQIHKNTDLKHFDFTKN
Ga0212024_10820301	3300022065	Aqueous	FVNFKFIDTYPNFPKVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLQYFDVTRH
Ga0212021_10017368	3300022068	Aqueous	DTYPNFPKVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLKYFDVTRH
Ga0212021_10665072	3300022068	Aqueous	TFPYFTKVNDMVEEIKKRSDVDLINYEYSYTGIHEDTDLKHFDITRN
Ga0212028_11045162	3300022071	Aqueous	VSQIKRRTDVDLIDYEYTYTGIHEDTDLTHLEITRN
Ga0224906_10515315	3300022074	Seawater	FTKVNEMVEEIKRRSDVDLINYEYSYTGIHEDTDIKHFDFTKN
Ga0196891_10478921	3300022183	Aqueous	EEIKKRSDVDLINYEYSYTGIHEDTDLKHFDITRN
Ga0255768_102639893	3300023180	Salt Marsh	YFTKVNDMVEEIKKRSDVDLINYEYSYTGIHEDTDLKHFDITRN
Ga0209992_103486811	3300024344	Deep Subsurface	VNFKFIDTYPNFPKVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLKYFDVTRH
Ga0208667_10078711	3300025070	Marine	VNEMVEEIKRRSDVDLINYEYSYTGIHEDTDIKHFDITRN
Ga0208434_11150171	3300025098	Marine	VNEMVEEIKRRSDVDLINYEYSYTGIHEDTDIKHFDFTKN
Ga0208669_10166365	3300025099	Marine	NNPYGSYVSFRFIDTYPYFTKVNEMVEEIKRRSDVDLINYEYSYTGIHEDTDIKHFDFTK
Ga0208159_10726931	3300025101	Marine	PNFPKVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLQYFDVTRH
Ga0208919_11499081	3300025128	Marine	FVDTFPYFTKVNEMVHEVKSRSDVELINFEYSYTGIHEDTDIKHFDITRN
Ga0209337_11412733	3300025168	Marine	ETSNNPMGSYVSFSFIDTYPYFTKVNEMVEEIKRRTDVDLINYEYTYKQIHKNTDLKYFDVTRN
Ga0208303_100865710	3300025543	Aqueous	RFIDTYPYFTKVNEMVEEIKRRSDVDLINYEYTYKQIHKNTDLKHFDFTKN
Ga0208303_10539614	3300025543	Aqueous	KFIDTYPNFPKVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLQYFDVTRH
Ga0209194_10111561	3300025632	Pelagic Marine	IEEIKKREDVDLINYEYSYTSIKKDTDLKYFEITRN
Ga0209194_10923333	3300025632	Pelagic Marine	DTYPYFTKVNEMVEEIKRRSDVDLINYEYTYKQIHKNTDLKHLDFTKN
Ga0208643_11288863	3300025645	Aqueous	DLYPNFPKVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLKYFDLTRH
Ga0208161_10313271	3300025646	Aqueous	FVSFRFVDTFPSFPKVNEMVSEIKKRTDVDLVDYEFTYTGIHEDTDLTHLEITRN
Ga0208162_10440754	3300025674	Aqueous	EMISEINKREDVDLIDYEYSYTGIHEDTDISNLEITRN
Ga0209602_11399253	3300025704	Pelagic Marine	NNMIEEIKKREDVDLIDYEYSYTGIHEDTDLKYFEITRH
Ga0208899_10463851	3300025759	Aqueous	YFTKVNEMVAEIKSRNDVELIDYEYSYTGIHEDTDLSNLEVTRN
Ga0208425_10523101	3300025803	Aqueous	FVNFKFIDTYPNFPKVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLKYFDVTRH
Ga0209193_11639071	3300025816	Pelagic Marine	PYFTKVNEMVEEIKRRSDVDLINYEYTYKQIHKNTDIKQFDFTKN
Ga0208645_11211483	3300025853	Aqueous	ELQLETSNNPYGSYVSFRFIDTYPYFTKVNEMVEEIKRRSDVDLINYEYTYKQIHKNTDIKQFDFTKN
Ga0209309_101586825	3300025881	Pelagic Marine	DTYPNFPKVNDMIAEIKKRGDVDLINFEYSYTGIHEDTDLKYFDLTRH
Ga0209632_102307964	3300025886	Pelagic Marine	NNMIEEIKKREDVDLINYEYSYTSIKKDTDLKYFEITRN
Ga0208644_10456261	3300025889	Aqueous	YFPKVNQMVSEIKRRTDVDLIDYEYTYTGIHEDTDLTHLEITRN
Ga0208644_13237111	3300025889	Aqueous	NDMIAEIKKRGDVDLINFEYSYTGIHEDTDLKYFDVTRH
Ga0209631_102347501	3300025890	Pelagic Marine	MIAEIKKRGDVDLINFEYSYTGIHEDTDLKYFDVTRH
Ga0209951_10776043	3300026138	Pond Water	EEIKRRTDVDLINYEYSYTGIHEDTDLKHFDITRN
Ga0209503_100639361	3300027859	Marine	DMIAEIKKRGDVDLINFEYSYTGIHEDTDLQYFDVIRH
Ga0183683_10093991	3300029309	Marine	VNEMVHEVKSRSDVELINFEYSYTGIHEDTDIKHFDITRN
Ga0315320_107662312	3300031851	Seawater	FRFIDTYPYFTKVNEMVEEIKRRSDVDLINYEYTYKQIHKNTDIKQFDFTKN
Ga0315321_102058971	3300032088	Seawater	PYGSYVSFRFIDTYPYFTKVNEMVEEIKRRSDVDLINYEYTYKQIHKNTDIKQFDFTKN
Ga0348335_084205_40_153	3300034374	Aqueous	MIEEIKKREDVDLIDYEYSYTGIHEDTDLKYFEITRH
Ga0348336_119127_3_113	3300034375	Aqueous	VEEIKRRSDVDLINYEYTYKQIHKNTDIKQFDFTKN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064202

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences