Metagenome / Metatranscriptome Family F064169

Basic Information
Family ID	F064169
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	44 residues
Representative Sequence	TMDRVDDTADRVRSNVRAKTSRIVGIVRGARVALENILSRAA
Number of Associated Samples	103
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.36 %
% of genes near scaffold ends (potentially truncated)	95.35 %
% of genes from short scaffolds (< 2000 bps)	98.45 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Most Common Taxonomy
Group	Bacteria (97.674 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.178 % of family members)
Environment Ontology (ENVO)	Unclassified (22.481 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (36.434 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.14% β-sheet: 0.00% Coil/Unstructured: 42.86%
Feature Viewer

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Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF12732	YtxH	93.80
PF03631	Virul_fac_BrkB	3.88
PF07394	DUF1501	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	3.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.67 %
Unclassified	root	N/A	2.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.67 %
Unclassified	root	N/A	2.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.67 %
Unclassified	root	N/A	2.33 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	95.35 %
Unclassified	root	N/A	2.33 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	2.33 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.78 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.78 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	2.33 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	2.33 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.78 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	2.33 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.78 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	2.33 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.78 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	2.33 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.78 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y01BBCQW	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300001305\|C688J14111_10219467	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300003308\|Ga0006777J48905_1031429	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300003308\|Ga0006777J48905_1043203	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300003570\|Ga0007418J51697_1035271	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300003571\|Ga0007419J51692_1039169	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300003577\|Ga0007416J51690_1054238	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300003579\|Ga0007429J51699_1030455	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300003579\|Ga0007429J51699_1031684	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300003579\|Ga0007429J51699_1055356	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300003735\|Ga0006780_1048584	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300004081\|Ga0063454_101610668	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300004643\|Ga0062591_102263197	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300004801\|Ga0058860_11887411	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300004803\|Ga0058862_12418073	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300005093\|Ga0062594_102330186	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300005336\|Ga0070680_100798466	All Organisms → cellular organisms → Bacteria → Acidobacteria	813	Open in IMG/M
3300005354\|Ga0070675_101831813	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300005365\|Ga0070688_100821309	All Organisms → cellular organisms → Bacteria → Acidobacteria	728	Open in IMG/M
3300005367\|Ga0070667_101641407	All Organisms → cellular organisms → Bacteria → Acidobacteria	604	Open in IMG/M
3300005457\|Ga0070662_101584413	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300005459\|Ga0068867_101538141	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300005543\|Ga0070672_101084850	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300005564\|Ga0070664_100242224	All Organisms → cellular organisms → Bacteria → Acidobacteria	1619	Open in IMG/M
3300005764\|Ga0066903_104730236	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300006163\|Ga0070715_10112729	All Organisms → cellular organisms → Bacteria → Acidobacteria	1285	Open in IMG/M
3300006969\|Ga0075419_10318164	All Organisms → cellular organisms → Bacteria → Acidobacteria	1052	Open in IMG/M
3300009012\|Ga0066710_101493286	All Organisms → cellular organisms → Bacteria → Acidobacteria	1043	Open in IMG/M
3300009156\|Ga0111538_11876765	All Organisms → cellular organisms → Bacteria → Acidobacteria	754	Open in IMG/M
3300009649\|Ga0105855_1138704	Not Available	701	Open in IMG/M
3300010109\|Ga0127497_1015539	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300010112\|Ga0127458_1019339	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300010132\|Ga0127455_1163361	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300010145\|Ga0126321_1248962	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300010146\|Ga0126320_1318110	All Organisms → cellular organisms → Bacteria → Acidobacteria	1044	Open in IMG/M
3300010147\|Ga0126319_1019569	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300010147\|Ga0126319_1320144	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300010147\|Ga0126319_1564327	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300010152\|Ga0126318_10059724	All Organisms → cellular organisms → Bacteria → Acidobacteria	969	Open in IMG/M
3300010400\|Ga0134122_10943329	All Organisms → cellular organisms → Bacteria → Acidobacteria	839	Open in IMG/M
3300010401\|Ga0134121_12860350	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300010870\|Ga0102750_10014553	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300011270\|Ga0137391_11481400	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300011332\|Ga0126317_10678544	All Organisms → cellular organisms → Bacteria → Acidobacteria	1108	Open in IMG/M
3300012212\|Ga0150985_100812608	All Organisms → cellular organisms → Bacteria → Acidobacteria	531	Open in IMG/M
3300012212\|Ga0150985_102881447	All Organisms → cellular organisms → Bacteria → Acidobacteria	1005	Open in IMG/M
3300012212\|Ga0150985_103616339	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300012212\|Ga0150985_104280323	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300012212\|Ga0150985_105250647	All Organisms → cellular organisms → Bacteria → Acidobacteria	763	Open in IMG/M
3300012212\|Ga0150985_106290463	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300012212\|Ga0150985_107015181	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300012386\|Ga0134046_1156981	All Organisms → cellular organisms → Bacteria → Acidobacteria	954	Open in IMG/M
3300012396\|Ga0134057_1202411	All Organisms → cellular organisms → Bacteria → Acidobacteria	760	Open in IMG/M
3300012398\|Ga0134051_1283364	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300012469\|Ga0150984_105382281	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300012469\|Ga0150984_109587325	All Organisms → cellular organisms → Bacteria → Acidobacteria	839	Open in IMG/M
3300012469\|Ga0150984_120660849	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300012898\|Ga0157293_10318381	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300012907\|Ga0157283_10341039	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300012911\|Ga0157301_10356942	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300012948\|Ga0126375_11963076	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300012971\|Ga0126369_12468731	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300014487\|Ga0182000_10465701	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300015372\|Ga0132256_102478514	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300015373\|Ga0132257_102921607	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300015374\|Ga0132255_104940042	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300018067\|Ga0184611_1329641	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300018081\|Ga0184625_10185912	All Organisms → cellular organisms → Bacteria → Acidobacteria	1088	Open in IMG/M
3300019233\|Ga0184645_1227339	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300019233\|Ga0184645_1270161	All Organisms → cellular organisms → Bacteria → Acidobacteria	721	Open in IMG/M
3300019248\|Ga0180117_1258715	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300019255\|Ga0184643_1302120	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300019259\|Ga0184646_1192281	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300019259\|Ga0184646_1600590	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300019263\|Ga0184647_1169258	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300019269\|Ga0184644_1567560	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300019279\|Ga0184642_1562602	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300020063\|Ga0180118_1014994	All Organisms → cellular organisms → Bacteria → Acidobacteria	728	Open in IMG/M
3300020066\|Ga0180108_1179958	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300020069\|Ga0197907_10678009	All Organisms → cellular organisms → Bacteria → Acidobacteria	972	Open in IMG/M
3300020070\|Ga0206356_11394221	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300020078\|Ga0206352_10151558	All Organisms → cellular organisms → Bacteria → Acidobacteria	1045	Open in IMG/M
3300020078\|Ga0206352_11318445	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300020082\|Ga0206353_10323151	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300021082\|Ga0210380_10426386	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300022530\|Ga0242658_1214515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300024177\|Ga0247686_1041774	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300025908\|Ga0207643_10335298	All Organisms → cellular organisms → Bacteria → Acidobacteria	947	Open in IMG/M
3300025921\|Ga0207652_10727974	All Organisms → cellular organisms → Bacteria → Acidobacteria	884	Open in IMG/M
3300025927\|Ga0207687_11917933	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300025930\|Ga0207701_10194618	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1784	Open in IMG/M
3300025934\|Ga0207686_10393734	All Organisms → cellular organisms → Bacteria → Acidobacteria	1053	Open in IMG/M
3300026089\|Ga0207648_11560925	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300026319\|Ga0209647_1230701	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300028554\|Ga0302047_10113736	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300030784\|Ga0102758_10961683	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300030785\|Ga0102757_11182892	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300030785\|Ga0102757_11346417	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300030858\|Ga0102759_1727710	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300030858\|Ga0102759_1911967	All Organisms → cellular organisms → Bacteria → Acidobacteria	723	Open in IMG/M
3300030858\|Ga0102759_1953335	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300030903\|Ga0308206_1110141	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300030905\|Ga0308200_1059866	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300030936\|Ga0138306_1657547	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300030993\|Ga0308190_1083024	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300030998\|Ga0073996_12142100	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300031039\|Ga0102760_10642399	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300031039\|Ga0102760_10919774	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300031058\|Ga0308189_10099252	All Organisms → cellular organisms → Bacteria → Acidobacteria	920	Open in IMG/M
3300031058\|Ga0308189_10274097	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300031058\|Ga0308189_10430267	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300031089\|Ga0102748_11533223	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300031091\|Ga0308201_10083439	All Organisms → cellular organisms → Bacteria → Acidobacteria	886	Open in IMG/M
3300031091\|Ga0308201_10162290	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300031092\|Ga0308204_10173892	All Organisms → cellular organisms → Bacteria → Acidobacteria	655	Open in IMG/M
3300031093\|Ga0308197_10125545	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300031096\|Ga0308193_1061012	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300031114\|Ga0308187_10387688	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	548	Open in IMG/M
3300031114\|Ga0308187_10461888	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300031538\|Ga0310888_10134443	All Organisms → cellular organisms → Bacteria → Acidobacteria	1301	Open in IMG/M
3300031538\|Ga0310888_11037500	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300031731\|Ga0307405_10702038	All Organisms → cellular organisms → Bacteria → Acidobacteria	838	Open in IMG/M
3300031854\|Ga0310904_10348070	All Organisms → cellular organisms → Bacteria → Acidobacteria	954	Open in IMG/M
3300032001\|Ga0306922_11205870	All Organisms → cellular organisms → Bacteria → Acidobacteria	770	Open in IMG/M
3300032205\|Ga0307472_102644153	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300032211\|Ga0310896_10600580	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300034660\|Ga0314781_118477	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.54%
Host-Associated	Host-Associated	28.68%
Engineered	Engineered	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.26%
Plants	Host-Associated → Plants	27.13%
Aquatic	Environmental → Aquatic	16.28%
Human	Host-Associated → Human	1.55%
Solid Waste	Engineered → Solid Waste	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.26%
Freshwater	Environmental → Aquatic → Freshwater	14.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.18%
Sediment	Environmental → Aquatic → Sediment	1.55%
Digestive System	Host-Associated → Human → Digestive System	1.55%
Grass	Engineered → Solid Waste → Grass	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	11.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	9.30%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.30%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	5.43%
Loam	Environmental → Terrestrial → Soil → Loam	5.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.55%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.78%
Composting	Engineered → Solid Waste → Grass → Composting	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	11.63%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	9.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.30%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	5.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.10%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.55%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.55%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.40%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	10.08%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	9.30%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	5.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.65%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	4.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.33%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.55%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.55%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300003308	Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003570	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_34 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003571	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_35 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003577	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_32 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003579	Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003735	Avena fatua rhizosphere microbial communities - H4_Bulk_Litter_23 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300010109	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010112	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010132	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010870	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019248	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020066	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT45_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024177	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK27	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300028554	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 3A (Eukaryote Community Metatranscriptome) (v9)	Environmental	Open in IMG/M
3300030784	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines Pi 6A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030785	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030858	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030936	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_OS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031039	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031089	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 2B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300034660	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_02523570	2170459015	Switchgrass, Maize And Mischanthus Litter	TNRVDSAIRTTMARVDDTADRVRSNVRAKTSLVVGFVRGVRVALDTMLKSAA
C688J14111_102194671	3300001305	Soil	RIDDTADRVRTNVRAKTSALVGFLRGARLTIEALLRSEART*
Ga0006777J48905_10314291	3300003308	Avena Fatua Rhizosphere	YAIRSTMDRVDDTADRVRSNVRAKTSRIVGFVRGARAALETMLSRAA*
Ga0006777J48905_10432031	3300003308	Avena Fatua Rhizosphere	TIDRVDDTADRVRSNVLAKTSRIVGIVRGARVALEHILSRAA*
Ga0007418J51697_10352711	3300003570	Avena Fatua Rhizosphere	TMDRVDDTADRVRSNVRAKTSRIVGFVRGARAALETMLSRAA*
Ga0007419J51692_10391691	3300003571	Avena Fatua Rhizosphere	AIKTTMDRVDDTADRVRSNVRAKTSRIVGIVRGARVALEHILSSAA*
Ga0007416J51690_10542381	3300003577	Avena Fatua Rhizosphere	DETERVDSAIRTTIDRVDDTADRVRSNVLAKTSRIVGIVRGARVALEHILSRAA*
Ga0007429J51699_10304551	3300003579	Avena Fatua Rhizosphere	AERVDTAIKTTMDRVDDTADRVRSNVRAKTSRIVGIVRGARVALEHILSSAA*
Ga0007429J51699_10316841	3300003579	Avena Fatua Rhizosphere	KVASAKVKDETERVDSAIRTTIDRVDDTADRVRSNVLAKTSRIVGIVRGARVALEHILSRAA*
Ga0007429J51699_10553561	3300003579	Avena Fatua Rhizosphere	AIRTTMDRVDDTADRVRSNVRAKTSRIVGIVRGARVALEHILSRAA*
Ga0006780_10485841	3300003735	Avena Fatua Rhizosphere	QAIRTTMDRVDDTADRVRSNVRVKTSRIVGLMRGVRVALESMLNSRAA*
Ga0063454_1016106682	3300004081	Soil	DDTADRVRSNVRAKTSRIVGFVRGLRVALEGMLHSEART*
Ga0062591_1022631972	3300004643	Soil	RVDDTAERVRTNVRLRTSRIVGIVRGARVALEHILSSAA*
Ga0058860_118874112	3300004801	Host-Associated	IRSTMNRVDDTADRVKTNVRARTSRIVGFVRGARVALETILSRAA*
Ga0058862_124180731	3300004803	Host-Associated	RVDDTADRVRSNVRAKTSRIIGIVRGAKVALEHILSRAA*
Ga0062594_1023301861	3300005093	Soil	HTTIDRVDDTVDRMRWNVRAKTSRIVGMVRGARLAIESMLHRAA*
Ga0070680_1007984661	3300005336	Corn Rhizosphere	ALRSTIHRVDDTAGRVRSNVRAKTSRVVGFVRGVRVAIETMLRPAA*
Ga0070675_1018318131	3300005354	Miscanthus Rhizosphere	RVDDTADRMRSNVRAKTSRVVGFVRGVRVAIETMLRPAA*
Ga0070688_1008213092	3300005365	Switchgrass Rhizosphere	DETDRVDTAIRTTMDVVDDTTERVRTNVRAQTSRIVGIIRGARVALEHILSRAA*
Ga0070667_1016414072	3300005367	Switchgrass Rhizosphere	ERVDDTAERVRTNVRLRTSRIVGIVRGARVALEHILSSAA*
Ga0070662_1015844132	3300005457	Corn Rhizosphere	RVDYALRSTIHRVDDTAGRVRSNVRAKTSRVVGFVRGVRVAIETMLRPAA*
Ga0068867_1015381412	3300005459	Miscanthus Rhizosphere	SAIRTTMDRVDDTAERVRWNVLAKTSRIVGIVRGARVALEHILSRAA*
Ga0070672_1010848502	3300005543	Miscanthus Rhizosphere	VDDTADRVRSNVRAKTSRIVGIVRGARVALEHILSSAA*
Ga0070664_1002422244	3300005564	Corn Rhizosphere	TAIRTTMDRVDDTADRVRSNVRAKTSRIVGIVRGARVALEHILSRAA*
Ga0066903_1047302361	3300005764	Tropical Forest Soil	RIDDTADRVRTNVRVKTSRIVGFIRGLRVALEGMLQTEART*
Ga0070715_101127291	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	YAIRSTMNRVDDTADRVRTNVRARTSRIVGFVRGARVALETMLSRAA*
Ga0075419_103181644	3300006969	Populus Rhizosphere	LRSTIHRVDDTAGRVRSNVRAKTSRVVGFVRGVRVAIETMLRPAA*
Ga0066710_1014932861	3300009012	Grasslands Soil	VDDTADRVRSNVREKTSRVIGFVRGLRVAMESMLHSRAA
Ga0111538_118767652	3300009156	Populus Rhizosphere	TINRVDDTAYRVRSNVRAKTSRVVGFVRGVRVAIETMLRPAA*
Ga0105855_11387042	3300009649	Permafrost Soil	DRIDDTAVRVRSNVRARTSHLVGLLRGMRAVLEGMLRT*
Ga0127497_10155391	3300010109	Grasslands Soil	VDQAIHRTIDRVDDTADRVRSNVRAKTSRVVGFVRGLRVAMEAMLQSRAA*
Ga0127458_10193391	3300010112	Grasslands Soil	QAIHRTIDRVDDTADRVRSNVRAKTSRVVGFVRGLRVAMEAMLQSRAA*
Ga0127455_11633611	3300010132	Grasslands Soil	RVDDTADRVRSNVRAKTSRVVGFVRGLRVAMEAMLQSRAA*
Ga0126321_12489621	3300010145	Soil	RTIDRVDDTADRVRTNVRAKTSRVVGFVRGLRVAMESMLHSRAA*
Ga0126320_13181101	3300010146	Soil	DTADRVRTNVRVKTSRVVGIVRGLRVALETMMQKRAA*
Ga0126319_10195692	3300010147	Soil	VDDTADRVRANVRAKTSRIVGIVRGARVAIESMLSRAA*
Ga0126319_13201442	3300010147	Soil	VDDTAERVRWNVLVKTSRIIGIVRGARVALEHILSRAA*
Ga0126319_15643271	3300010147	Soil	TIHRVDDTAGRVRSNVRAKTSRVVGFVRGVRVAIETMLRPAA*
Ga0126318_100597243	3300010152	Soil	DDTADRVRSNVRAKTSRLVGIVRGARVAIEHILSRAA*
Ga0134122_109433293	3300010400	Terrestrial Soil	LRSTINRVDNTADRVRSNVRAKTSRVVGFVRGVRVAIETMLRPAA*
Ga0134121_128603501	3300010401	Terrestrial Soil	TADRVRTNVRAKTSRIVGFVRGARVALETMLSRAA*
Ga0102750_100145532	3300010870	Soil	AERVDQAIRTTIDRVDDTADRVRTNVRAKTSRIVGVMRGVRVALESMLHTRAA*
Ga0137391_114814001	3300011270	Vadose Zone Soil	VHEETVRLDDAIRSTINRVDHTAERVRRNVLAKTSRIVGFVRGARTVIEMILNSRAA*
Ga0126317_106785441	3300011332	Soil	TIDRIDNTADRVRSNVRAKTSALVGFIRGLRVALEGVLHREART*
Ga0150985_1008126082	3300012212	Avena Fatua Rhizosphere	MGRIDDTADRVRSNVRAKTSRIVGLVRGLRVALEGMLHSEART*
Ga0150985_1028814473	3300012212	Avena Fatua Rhizosphere	VDDTAGRVRSNVRAKTSKVVGIVRGLRVALETMMQSRAA*
Ga0150985_1036163392	3300012212	Avena Fatua Rhizosphere	DAIHRTMDRVDDTADRVRYTVRAKTSRIVGFVRGARMAIETMLRSRAA*
Ga0150985_1042803232	3300012212	Avena Fatua Rhizosphere	KTTMDRVDDTADRVRSNVRAKTSRIVGIVRGARVAIEHILSRAA*
Ga0150985_1052506471	3300012212	Avena Fatua Rhizosphere	KSETVRVDQAILSTMGRVDDTVDRVKSNVRAKTSRIVGLVRGARVALEAMLQSRAA*
Ga0150985_1062904633	3300012212	Avena Fatua Rhizosphere	DLAIRTTMDRVDDTADRVRSNVRAKTSRIVGFVRGARMAIETILSNSRAA*
Ga0150985_1070151811	3300012212	Avena Fatua Rhizosphere	TAIKTTMDRVDDTADRVRSNVRAKTSRIVGIVRGVRVALEHILSNAA*
Ga0134046_11569812	3300012386	Grasslands Soil	IHRTMDRVDDTADRVRSNVRAKTSRVVGFVRGLRVVMESILHSRAA*
Ga0134057_12024112	3300012396	Grasslands Soil	VDDAIHRTMDRVDDTADRVRSNVRAKTSRVVGMVRGLRVALETIMQTRPA*
Ga0134051_12833642	3300012398	Grasslands Soil	VDDTADRVRSNVRAKTSKMVGMVRGLRVALETMMQSRAA*
Ga0150984_1053822812	3300012469	Avena Fatua Rhizosphere	VDDTAERVRGNVRDKTNRIIGLVRGVRVAVESILQSRAA*
Ga0150984_1095873253	3300012469	Avena Fatua Rhizosphere	VDDTADRVRSNVRVKTSRIVGLMRGVRVALESMLNSRAA*
Ga0150984_1206608492	3300012469	Avena Fatua Rhizosphere	VDDTVDRVKSNVRARTSRIVGLVRGARVALEAMLQSRAA*
Ga0157293_103183812	3300012898	Soil	VDDTAERVRWNVLAKTSRIVGIVRGARVALEHILSRAA*
Ga0157283_103410392	3300012907	Soil	IHRTIDRVDDTADRVRSNVRAKTSRIIGFVRGARTAIETILTHSRAA*
Ga0157301_103569421	3300012911	Soil	RVDDTVDRMRWNMRAKTSRIVGIVRGARVAIESMLSRAA*
Ga0126375_119630762	3300012948	Tropical Forest Soil	MGRIDDTADRVRTNVRVKTSRIIGFIRGLRVALEGMLQSEART*
Ga0126369_124687312	3300012971	Tropical Forest Soil	DQAIRSTMDRVDESADRLRSNVRARTSRLVGLVRGARVAIETMLSNSRAA*
Ga0182000_104657012	3300014487	Soil	MGRIDDTADRVRSNVRAKTSRIVGFVRGLRVALEGMLHSEART*
Ga0132256_1024785141	3300015372	Arabidopsis Rhizosphere	TTMDKVDDTAERVRSNVRAKTSRIIGIVRGARVALEHILSRAA*
Ga0132257_1029216072	3300015373	Arabidopsis Rhizosphere	VDTAIRTTMERVDDTAERVRTNVRLRTSRIVGIVRGARVALEHILSSAA*
Ga0132255_1049400422	3300015374	Arabidopsis Rhizosphere	RTTIHRVDDTADRVRSNVRAKTSRVVGFVRGLRVAIESMLHSSEART*
Ga0184611_13296411	3300018067	Groundwater Sediment	TTIDRVDDTVDRMRWNVRAKTSRIVGMVRGARLAIESMLHRAA
Ga0184625_101859124	3300018081	Groundwater Sediment	ERVDHAIHTTIDRVDDTVDRMRWNVRAKTSRIVGMVRGARLAIESMLHRAA
Ga0184645_12273391	3300019233	Groundwater Sediment	RTIDRVDDTADRVRSNVRAKTSRVVGFVRGLRVAIEGLLPVRN
Ga0184645_12701612	3300019233	Groundwater Sediment	IDRVDDTADRVRSNVRAKTSKVVGLVRGLRVALETIMQSRAA
Ga0180117_12587151	3300019248	Groundwater Sediment	HAIHTTIDRVDDTVDRMRWNVRAKTSRLVGMVRGARHAIESMLHRAA
Ga0184643_13021202	3300019255	Groundwater Sediment	AIHRTIDRVDDTADRVRSNVRAKTSKVVGLVRGLRVALETIMQSRAA
Ga0184646_11922811	3300019259	Groundwater Sediment	TADRVRSNVRAKTSWVVGFIRGVRVAVESMLRTPEATEGRS
Ga0184646_16005902	3300019259	Groundwater Sediment	DQAIRTTIDRVDDTADRVRSNVRAKTSRIVGLVRGARVAIETILNSRAA
Ga0184647_11692582	3300019263	Groundwater Sediment	DTADRVRSNVRAKTSRIVGIVRGARVALEHILSRAA
Ga0184644_15675601	3300019269	Groundwater Sediment	IDDTADRVRSNVRAKTSRLVGLIRGARMAIETALRTEVRT
Ga0184642_15626022	3300019279	Groundwater Sediment	VDDTADRVRSNVRAKTSRVVGFVRGLRVAIEGLLPVRN
Ga0180118_10149943	3300020063	Groundwater Sediment	DRVDDTVDRVRWNVRAKTSRLIGIVRGARLAIETILSRAA
Ga0180108_11799582	3300020066	Groundwater Sediment	AETERVDHAIHTTIDRVDDTVDRMRWNVRAKTSRFVGMVRGARLAIETILSRAA
Ga0197907_106780093	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	DRVDDTADRVRSNVRAKTSRLVGIVRGARVAIEHILSRAA
Ga0206356_113942211	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	TMDRVDDTADRVRSNVRAKTSRIVGIVRGARVALENILSRAA
Ga0206352_101515581	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	TMDRVDDTADRVRSNVRAKTSRIVGIVRGARVALEHILSSAA
Ga0206352_113184452	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	RIDDTADRVRSNVRAKTSRVVGFVRGLRVALEGMLHSEART
Ga0206353_103231511	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MERVDDTAERVRTNVRLRTSRIVGIVRGARVALEHILSSAA
Ga0210380_104263861	3300021082	Groundwater Sediment	IDRVDDTVDRMRWNVRAKTSRIVGMVRGARLAIESMLHRAA
Ga0242658_12145151	3300022530	Soil	MDRVDDTADRVRSNVRVKTSRIVGLMRGVRVALESMLNSRAA
Ga0247686_10417741	3300024177	Soil	DDTADRVRSNVRAKTSRIVGFVRGLRVALEGMLHSEART
Ga0207643_103352981	3300025908	Miscanthus Rhizosphere	RTTMDRVDDTAERVRWNVLAKTSRIVGIVRGARVALEHILSRAA
Ga0207652_107279744	3300025921	Corn Rhizosphere	RIDDTADRVRSNVRAKTSSIAAFVRGARAAVEGMLHRSEVRT
Ga0207687_119179332	3300025927	Miscanthus Rhizosphere	RVDDTAERVRWNVLAKTSRIVGIVRGARVALEHILSRAA
Ga0207701_101946181	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	AIRTTMERVDDTAERVRTNVRLRTSRIVGIVRGARVALEHILSSAA
Ga0207686_103937343	3300025934	Miscanthus Rhizosphere	TADRVRSNVRMKTSRIVGFVRGVRVALEGFLHTRQAA
Ga0207648_115609251	3300026089	Miscanthus Rhizosphere	SAIRTTMDRVDDTAERVRWNVLAKTSRIVGIVRGARVALEHILSRAA
Ga0209647_12307011	3300026319	Grasslands Soil	TADRVRSNVRARTSRIVGFVRGVRVAIESMLTTSELRT
Ga0302047_101137362	3300028554	Soil	AERVDQAIRTTIDRVDDTADRVRTNVRAKTSRIVGVMRGVRVALESMLHTRAA
Ga0102758_109616831	3300030784	Soil	FVDDTADRVRTNVRAKTSRLVGLMRGVRVAVESMLGSQA
Ga0102757_100450053	3300030785	Soil	ALRTTMDRVDDTADRVRSNVKAQTGRLVGILRGARVAIETMLGARAM
Ga0102757_111828922	3300030785	Soil	MDRVDDTADRVRSNVRAKTSRLVGLMRGVRVAVESMLGSQA
Ga0102757_113464172	3300030785	Soil	MDRVDDTADRVRSNVRAKTSRLVGLIRGVRVAVESLLNSRAA
Ga0102759_17277101	3300030858	Soil	VDDTADRVRTNVREKTSRIVGLVRGARVALESFLQSRAA
Ga0102759_19119672	3300030858	Soil	DDTADRVRTNVRAKTSRLVGLMRGVRVAVESMLGSQA
Ga0102759_19533352	3300030858	Soil	RVDDTADRVRSNVRVKTSRIVGLMRGVRVALESMLNSRAA
Ga0308202_10723371	3300030902	Soil	ADRVRSNVRAKTSRLVGLIRGARMAIESALRTEVRT
Ga0308206_11101411	3300030903	Soil	MDRVDDTADRVRTNVRAKTSRLVGLLRGVRVAVESMLGSQA
Ga0308200_10598661	3300030905	Soil	VDTAIRTTMDRVDDTADRVRSNVRAKTSRIVGIVRGARVALEHILSRAA
Ga0138306_16575472	3300030936	Soil	VDTAIRTTMDRVDDTAERVRSNVRAKTSMIVGIVRGARVALEHILSRAA
Ga0308190_10830242	3300030993	Soil	VDSAIRSTIDRVDDTADRVRSNVRAKTSRVVGFVRGVRVAIETMLRQAA
Ga0073996_121421001	3300030998	Soil	MDRVDDTADRVRSNVRAKTSRIVGLVRGARVAIEAILHSRAA
Ga0102760_106423991	3300031039	Soil	MDRVDDTADRVRTNVREKTSRIVGLVRGARVALESFLQSRAA
Ga0102760_109197742	3300031039	Soil	DDTADRVRSNVRAKTSRLVGLMRGVRVALEAMLGSQA
Ga0308189_100992521	3300031058	Soil	VDDTADRVRSNVRVKTSRIVGMVRGARVALETMLHSRAA
Ga0308189_102740972	3300031058	Soil	RVDHAIRTTIDRVDDTAERVRSNVRAKTSWVVGAVRGLRTAVEQLLSSRPVQGKS
Ga0308189_104302671	3300031058	Soil	ERVDHAIHRTIDRVDDTADRVRSNVRAKTSRIVGFVRGLRVAIERMLPIRS
Ga0102748_115332231	3300031089	Soil	VDDTADRVRSNVRVKTSRIVGLMRGVRVALESMLNSRAA
Ga0308201_100834393	3300031091	Soil	DDTADRVRTNVRAKTSRFVGLLRGVRVAVESMLGSQA
Ga0308201_101622902	3300031091	Soil	VDTALRTTMDRVDDTADRVRSNVRAQTGRLVGILRGARVALESMLSARAM
Ga0308204_101738921	3300031092	Soil	ERVDDAIHRTMERVDDTADRVRYNVRAKTSRIVGFVRGARMAIETMLRSRAA
Ga0308197_101255451	3300031093	Soil	KDETDRVDTAIRTTMDVVDDTTERVRTNVRAQTSRIVGIIRGARVALEHILSRAA
Ga0308193_10610121	3300031096	Soil	RTIDRVDDTADRVRSNVRAKTSKVVGLVRGLRVALETIMQSRAA
Ga0308187_103876881	3300031114	Soil	RIDDTADRVRSNVRAKTSRLVGLIRGARMAIETALRSEVRT
Ga0308187_104618882	3300031114	Soil	AIRTTMDRVDGTADRVRSNVRAKTSRLVGLLRGVRVAVESMLGSQA
Ga0310888_101344431	3300031538	Soil	TTIDRVDDTVDRMRWNMRAKTSRIVGIVRGARVAIESMLSRAA
Ga0310888_110375001	3300031538	Soil	TADRMRSNVRAKTSRVVGFVRGVRVAIETMLRPAA
Ga0307405_107020381	3300031731	Rhizosphere	HTTIDRVDDTVDRVRWNVRAKTSRIVGIVRGARVAIESMLSHAA
Ga0310904_103480701	3300031854	Soil	AERVDHAIHTTIDRVDDTVDRMRWNMRAKTSRIVGIVRGARVAIESMLSRAA
Ga0306922_112058701	3300032001	Soil	ETAVRVRSNVRAKTSAIVGLVRAARMALEGMFRSAVRT
Ga0307472_1026441532	3300032205	Hardwood Forest Soil	DTADRVRSNVRMKTSRVVGFVRGLRVAIESMLHTSEART
Ga0310896_106005801	3300032211	Soil	DRVDDTVDRMRWNVRAKTSRIVGLVRGARLAIESMLHRAA
Ga0314781_118477_432_548	3300034660	Soil	VDDTADRVRSNVREKTNRIVGIVRGARVALEHILTRAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064169

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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