Metagenome Family F064163

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064163
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	61 residues
Representative Sequence	MRLPNPLVLGAIYGLSELYLAFTRHSRTQAVSRDRRSLFLLWAVIIVSLWLGIQMIW
Number of Associated Samples	111
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	23.26 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	91.47 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.798 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (27.907 % of family members)
Environment Ontology (ENVO)	Unclassified (36.434 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.837 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.12% β-sheet: 0.00% Coil/Unstructured: 45.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF03734	YkuD	49.61
PF02922	CBM_48	37.98
PF13231	PMT_2	1.55
PF13650	Asp_protease_2	0.78
PF12544	LAM_C	0.78
PF10116	Host_attach	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	49.61
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	49.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.80 %
Unclassified	root	N/A	6.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.80 %
Unclassified	root	N/A	6.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.80 %
Unclassified	root	N/A	6.20 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	32.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.01 %
Unclassified	root	N/A	6.20 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	32.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	11.63 %
Unclassified	root	N/A	6.20 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	24.81 %
Unclassified	root	N/A	6.20 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.78 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.78 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.81 %
Unclassified	root	N/A	6.20 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.78 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.78 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.81 %
Unclassified	root	N/A	6.20 %
Frateuria	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Frateuria	0.78 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.78 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.81 %
Unclassified	root	N/A	6.20 %
Frateuria aurantia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Frateuria → Frateuria aurantia	0.78 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.78 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	24.81 %
Unclassified	root	N/A	6.20 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.78 %
Frateuria aurantia	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Frateuria → Frateuria aurantia	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_100294504	All Organisms → cellular organisms → Bacteria → Proteobacteria	535	Open in IMG/M
3300000955\|JGI1027J12803_101929956	All Organisms → cellular organisms → Bacteria → Proteobacteria	575	Open in IMG/M
3300000956\|JGI10216J12902_100316389	All Organisms → cellular organisms → Bacteria → Proteobacteria	997	Open in IMG/M
3300001431\|F14TB_100048935	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300002914\|JGI25617J43924_10326835	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300004643\|Ga0062591_101736884	All Organisms → cellular organisms → Bacteria → Proteobacteria	634	Open in IMG/M
3300005166\|Ga0066674_10226665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	889	Open in IMG/M
3300005171\|Ga0066677_10194035	All Organisms → cellular organisms → Bacteria → Proteobacteria	1134	Open in IMG/M
3300005171\|Ga0066677_10481792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	712	Open in IMG/M
3300005172\|Ga0066683_10505930	All Organisms → cellular organisms → Bacteria → Proteobacteria	738	Open in IMG/M
3300005175\|Ga0066673_10297993	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	940	Open in IMG/M
3300005186\|Ga0066676_10332175	All Organisms → cellular organisms → Bacteria → Proteobacteria	1013	Open in IMG/M
3300005187\|Ga0066675_10780716	All Organisms → cellular organisms → Bacteria → Proteobacteria	721	Open in IMG/M
3300005339\|Ga0070660_100808076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	789	Open in IMG/M
3300005366\|Ga0070659_100165922	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300005447\|Ga0066689_10767880	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300005451\|Ga0066681_10114465	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1556	Open in IMG/M
3300005451\|Ga0066681_10362390	All Organisms → cellular organisms → Bacteria → Proteobacteria	891	Open in IMG/M
3300005454\|Ga0066687_10237908	Not Available	1010	Open in IMG/M
3300005454\|Ga0066687_10868706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Frateuria → Frateuria aurantia	537	Open in IMG/M
3300005457\|Ga0070662_100008609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6657	Open in IMG/M
3300005467\|Ga0070706_100529614	All Organisms → cellular organisms → Bacteria → Proteobacteria	1096	Open in IMG/M
3300005467\|Ga0070706_101636303	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	587	Open in IMG/M
3300005536\|Ga0070697_100962919	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300005536\|Ga0070697_101483173	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300005553\|Ga0066695_10272495	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300005554\|Ga0066661_10247328	All Organisms → cellular organisms → Bacteria → Proteobacteria	1104	Open in IMG/M
3300005557\|Ga0066704_10043984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2795	Open in IMG/M
3300005557\|Ga0066704_10070016	All Organisms → cellular organisms → Bacteria	2257	Open in IMG/M
3300005558\|Ga0066698_10998439	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300005559\|Ga0066700_10335346	All Organisms → cellular organisms → Bacteria → Proteobacteria	1068	Open in IMG/M
3300005568\|Ga0066703_10230433	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300005569\|Ga0066705_10574300	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300005576\|Ga0066708_11015049	All Organisms → cellular organisms → Bacteria → Proteobacteria	515	Open in IMG/M
3300005586\|Ga0066691_10212848	All Organisms → cellular organisms → Bacteria → Proteobacteria	1128	Open in IMG/M
3300005598\|Ga0066706_10526785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	941	Open in IMG/M
3300005598\|Ga0066706_10888959	All Organisms → cellular organisms → Bacteria → Proteobacteria	695	Open in IMG/M
3300006163\|Ga0070715_10198720	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300006794\|Ga0066658_10149561	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1181	Open in IMG/M
3300006797\|Ga0066659_10922725	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300009012\|Ga0066710_102399518	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300009012\|Ga0066710_102578639	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	732	Open in IMG/M
3300010301\|Ga0134070_10366811	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300010301\|Ga0134070_10372965	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300010321\|Ga0134067_10099063	Not Available	995	Open in IMG/M
3300010337\|Ga0134062_10507349	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	607	Open in IMG/M
3300010358\|Ga0126370_10585377	Not Available	960	Open in IMG/M
3300010359\|Ga0126376_12773103	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	539	Open in IMG/M
3300010366\|Ga0126379_11547625	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	769	Open in IMG/M
3300011269\|Ga0137392_10052440	All Organisms → cellular organisms → Bacteria	3074	Open in IMG/M
3300011270\|Ga0137391_10488223	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1044	Open in IMG/M
3300012189\|Ga0137388_10460715	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300012199\|Ga0137383_11033247	All Organisms → cellular organisms → Bacteria → Proteobacteria	598	Open in IMG/M
3300012207\|Ga0137381_11250042	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	635	Open in IMG/M
3300012208\|Ga0137376_10483375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1075	Open in IMG/M
3300012208\|Ga0137376_10774409	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	826	Open in IMG/M
3300012209\|Ga0137379_10207726	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300012209\|Ga0137379_11389904	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300012210\|Ga0137378_10501333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1121	Open in IMG/M
3300012211\|Ga0137377_10432306	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300012211\|Ga0137377_10435059	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300012349\|Ga0137387_11333432	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300012351\|Ga0137386_11205536	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	529	Open in IMG/M
3300012353\|Ga0137367_11145103	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300012356\|Ga0137371_11193211	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300012359\|Ga0137385_10681855	Not Available	859	Open in IMG/M
3300012362\|Ga0137361_11572513	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300012532\|Ga0137373_11052319	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300012582\|Ga0137358_11047793	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300012918\|Ga0137396_10011054	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	5529	Open in IMG/M
3300012927\|Ga0137416_11992458	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	532	Open in IMG/M
3300012929\|Ga0137404_11365634	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300013503\|Ga0120127_10051083	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	829	Open in IMG/M
3300014166\|Ga0134079_10595811	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300014745\|Ga0157377_11689291	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300015241\|Ga0137418_10808083	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300015359\|Ga0134085_10384237	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300017654\|Ga0134069_1116535	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	878	Open in IMG/M
3300017657\|Ga0134074_1038962	All Organisms → cellular organisms → Bacteria → Proteobacteria	1597	Open in IMG/M
3300017936\|Ga0187821_10400993	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300018028\|Ga0184608_10052042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1615	Open in IMG/M
3300018028\|Ga0184608_10114844	Not Available	1136	Open in IMG/M
3300018028\|Ga0184608_10267182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	753	Open in IMG/M
3300018061\|Ga0184619_10450833	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300018081\|Ga0184625_10588011	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300019882\|Ga0193713_1040858	All Organisms → cellular organisms → Bacteria	1344	Open in IMG/M
3300019889\|Ga0193743_1241202	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	535	Open in IMG/M
3300020001\|Ga0193731_1087291	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	811	Open in IMG/M
3300020002\|Ga0193730_1017869	All Organisms → cellular organisms → Bacteria	2037	Open in IMG/M
3300020004\|Ga0193755_1105981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	886	Open in IMG/M
3300020008\|Ga0193757_1011644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	857	Open in IMG/M
3300020010\|Ga0193749_1057674	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	738	Open in IMG/M
3300020022\|Ga0193733_1015656	All Organisms → cellular organisms → Bacteria	2139	Open in IMG/M
3300020059\|Ga0193745_1023372	Not Available	1352	Open in IMG/M
3300021073\|Ga0210378_10397995	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300021080\|Ga0210382_10283943	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300022534\|Ga0224452_1212491	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300025905\|Ga0207685_10251937	Not Available	854	Open in IMG/M
3300025905\|Ga0207685_10814220	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300025919\|Ga0207657_10490797	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	962	Open in IMG/M
3300025922\|Ga0207646_10012039	All Organisms → cellular organisms → Bacteria → Proteobacteria	8332	Open in IMG/M
3300025922\|Ga0207646_10865471	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300025922\|Ga0207646_11098513	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	700	Open in IMG/M
3300025939\|Ga0207665_10958333	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300025972\|Ga0207668_11889992	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300026312\|Ga0209153_1296204	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300026315\|Ga0209686_1110501	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	939	Open in IMG/M
3300026316\|Ga0209155_1229957	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300026324\|Ga0209470_1000733	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	25639	Open in IMG/M
3300026334\|Ga0209377_1056359	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300026335\|Ga0209804_1099622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1338	Open in IMG/M
3300026343\|Ga0209159_1018322	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3995	Open in IMG/M
3300026374\|Ga0257146_1027135	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	930	Open in IMG/M
3300026523\|Ga0209808_1280704	All Organisms → cellular organisms → Bacteria → Proteobacteria	533	Open in IMG/M
3300026527\|Ga0209059_1192478	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300026529\|Ga0209806_1198565	All Organisms → cellular organisms → Bacteria → Proteobacteria	702	Open in IMG/M
3300026550\|Ga0209474_10126330	All Organisms → cellular organisms → Bacteria	1689	Open in IMG/M
3300026552\|Ga0209577_10436850	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300026557\|Ga0179587_10309935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1019	Open in IMG/M
3300027667\|Ga0209009_1056587	Not Available	981	Open in IMG/M
3300027903\|Ga0209488_10037705	All Organisms → cellular organisms → Bacteria	3534	Open in IMG/M
3300028796\|Ga0307287_10290517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	618	Open in IMG/M
3300028807\|Ga0307305_10203708	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	909	Open in IMG/M
3300028828\|Ga0307312_10806551	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	622	Open in IMG/M
3300031715\|Ga0307476_11312377	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	528	Open in IMG/M
3300031720\|Ga0307469_11120544	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	740	Open in IMG/M
3300031962\|Ga0307479_11744040	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300032421\|Ga0310812_10219324	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	830	Open in IMG/M
3300033412\|Ga0310810_10354655	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.35%
Host-Associated	Host-Associated	4.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.37%
Aquatic	Environmental → Aquatic	6.98%
Plants	Host-Associated → Plants	4.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.37%
Sediment	Environmental → Aquatic → Sediment	4.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.65%
Freshwater	Environmental → Aquatic → Freshwater	2.33%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.42%
Loam	Environmental → Terrestrial → Soil → Loam	13.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.53%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	30.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	27.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.20%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.10%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.33%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.33%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020008	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1002945042	3300000955	Soil	MRLPNPLVLAAIYGLSELYLVLTRRSQTQTVSRDRCSLMLLW
JGI1027J12803_1019299562	3300000955	Soil	MRLPNPLVLAAIYGLSELYLALTRRSQTQTVSCDRCSLILLWTIIIVSLWSGIQM
JGI10216J12902_1003163891	3300000956	Soil	MRLPNPLVLGAIYGLSELYLALTRRSQPQALSRDRRSLFLLWSVIVVSLWLG
F14TB_1000489353	3300001431	Soil	MRLPNPLLLTALYGLSELYLAITRHSRTQAVSRDRRSFFLLWTVIIVSLWLGIEMIWLFPRATLPYLRGFYFLGFILFL
JGI25617J43924_103268352	3300002914	Grasslands Soil	MRLPNPLVLAAIYGLSELYLALTRRSRAHAISRDRRSLMLLWAII
Ga0062591_1017368841	3300004643	Soil	MRLPNPLVLGAIYGLSELYLAFTRHSRAQAVSRERRSLFLLWAVIIVSLWLGIQMIWLYPRATL
Ga0066674_102266651	3300005166	Soil	MMRLPNPLLLGAIYGLSELYLALTRRSRAQAVSHDRRSLIFLWTVIVVSLWLGIQMIWLFPNA
Ga0066677_101940353	3300005171	Soil	MRLPNPLVLAAIYGLSELYLALTRRSQTQAVSRDRRSLILLWTIIIVSLWFGIQMVWLFPGATVPYL
Ga0066677_104817922	3300005171	Soil	MRLPNPLVLGAIYGLSELYLAFTRHSRTQAVSRDRRSLFLLWAVIIVSLWLGIQMIWLYPSATLPYPRGFYF
Ga0066683_105059301	3300005172	Soil	MRLPNPLLLGVVYGLSELYLAFTRHSRSQAVSRDRSSLFVLWAVIAASLWLGIQMVWLLPGATVPYSTGFYFLGFILF
Ga0066673_102979931	3300005175	Soil	MRWPDPLLLGTIYGLSELYLAVTRRSRTRALYRDRYTLYILWAVIIVSIFL
Ga0066676_103321753	3300005186	Soil	MRFPNPLLLAAIYGLSELYLAFTRHSRTQSISHDRRSLVLLWTVIIVSLWLGIQMVWLFP
Ga0066675_107807162	3300005187	Soil	MMRLPNPLLLGAIYGLSELYLAVTRRSRAQAVSHDRRSLILLWTVIAVSLWLGIQMIW
Ga0070660_1008080761	3300005339	Corn Rhizosphere	MRLPNPLLLAALYGLSELYLAFTRHSRTQAVSRDRSLLLLWTVIIASLCLGIQMIWLFP
Ga0070659_1001659221	3300005366	Corn Rhizosphere	MRLPNPLLLAALYGLSELYLAFTRHSRTQAVSRDRSLLLLWTVIIASLCLGIQMIWLFPKAVLPYPRGFYFLGFILFLAGLALRRYSIGYLG
Ga0066689_107678802	3300005447	Soil	MRWPDPLLLGTIYGLSELYLAVTRRSRTRALYRDRYTLYILWAVIIVSIFLAIQMVWLVPGAALPYPRGFYIFGFCVFIIGLIL
Ga0066681_101144652	3300005451	Soil	MRWPDPLLLGTIYGLSELYLAVTRRSRTRALYRDRYTLYILWAVIIVSIFLAIQMVWFAPGAALP
Ga0066681_103623902	3300005451	Soil	MMRLPNPLLLGAIYGLSELYLAVTRRSRAQAVSHGRRSLILLWTVIAVSLWLGIQM
Ga0066687_102379081	3300005454	Soil	MRLPDPLVLAAIYGLSELYLALTRRSGTQAISRDRRSLML
Ga0066687_108687061	3300005454	Soil	MRWPDPLLLGTIYGLSELYLAVTRRSRTRALYRDRYTLYILWAVIIVSIFLAIQMVWLAPGAALPYPRGFYIFGFCLF
Ga0070662_1000086099	3300005457	Corn Rhizosphere	MRLPNPLLLAALYGLSELYLAFTRHSRTQAVSRDRSLLLLWTVIIASLCLGIQMIWLFPKAVLPYPRGFYFLGFI
Ga0070706_1005296141	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRLPNPLVLAAIYGLSELYLVLTRRSQTQTVSRDRCSLMLLWTIIIVSLWSGIQMVRLFPGVTVPY
Ga0070706_1016363032	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRFPNPLLLGAIYGLSELYLAVTRRSHTQAVSHDRRSLVLLWTAIVISLWLGIQMMWLSPSAGVPFSAALYIFGFI
Ga0070697_1009629191	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRLPDPLILGAIYGLSELYLAFTRRSQAGALSRDRNSLIVLWAVIIVSLWLGVQMVWLVPRATLPHPGGFYLLGFCLFL
Ga0070697_1014831732	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRLPDPLLLGAIYGLSEVCLALTRRSGAGAASRDRHSLVFLWITIAV
Ga0066695_102724953	3300005553	Soil	MRLPNPLLLGAIYGLSELYLAVTRRSRTQAVSHDRRSLILLWTVIAVSLWLGIQMV
Ga0066661_102473281	3300005554	Soil	MRLPNPLVLAALYGLSELYLALTRRSRTQASSRDRRSLMLLWTIIIVSLWLGMQMVWLFPSATVRYLREFY
Ga0066704_100439843	3300005557	Soil	MRLPNPLLLGAIYGLSELYLAVTRRSRTQAVSHDRRSLILLWTVIAVSLWLGI
Ga0066704_100700163	3300005557	Soil	MRLPNPLVLAAIYGLSELYLALTRRSQTQTVSRDRRSLILLWTIIIASLWSGIQMVRLFPSATVPCPSGFYLFGFLL
Ga0066698_109984391	3300005558	Soil	MMRLPNPLLLGAIYGLSELYLALTRRSRAQAVSHDRRSLIFLWTVIVVSLWLGIQMIWLF
Ga0066700_103353462	3300005559	Soil	MRLPNPLVLAAIYGLSELYLALTRRSQTQAVSRDRRSLILLWTIIVVSLWFGIQMVWLFPGATVPYLRGFYLFGFLLFL
Ga0066703_102304331	3300005568	Soil	MRLPNPLLLGAIYGLSELYLAVTRRSRTQAVSHDRRSLILLWTVIAVSLWLGIQMIWLFPSAAVPYPRG
Ga0066705_105743002	3300005569	Soil	MRLPNPLVLAAIYGLSELYLALTRRSRTQAISRDRRSLMLLWTIIIVSLW
Ga0066708_110150492	3300005576	Soil	MRLPNPLVLGAIYGLSELYLAVTRRSRAQALSHDRRSLFLLWAVIIVSIWLGIQMV
Ga0066691_102128481	3300005586	Soil	MRLPNPLVLAAIYGLSELYLALTRRSQTQAVSRDRRSLILLWTIIVVSLWFGIQMVWLFPCATVPYLRGFYLFGF
Ga0066706_105267852	3300005598	Soil	MMRLPNPLLLGAIYGLSELYLVLIRRSRAQAVSHDRRSLIFLWTVIVVSLWLGIQMIW
Ga0066706_108889591	3300005598	Soil	MRLPNPLVLGAIYGLSELYLAVTRRSRAQALSHDRRSLFLLWAVIIVSIWLGIQMVWLCPGAAVAFR
Ga0070715_101987202	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRLPNSLVLAAIYGLSELYLALTRRSRTQAISRDRRSLMLLWTIIIVSLWLGIQMVWL
Ga0066658_101495612	3300006794	Soil	MRWPDPLLLGTIYGLSELYLAVTRRSRTRALYRDRY
Ga0066659_109227251	3300006797	Soil	MRLPDPLVLAAIYGLSELYLALTRRSGTQATSRDRRSLILLWAI
Ga0066710_1023995182	3300009012	Grasslands Soil	MRLPDPLLLGAIYGLSELYLAVTRRAPARANSRDRHSLILLWAVIIVSLW
Ga0066710_1025786391	3300009012	Grasslands Soil	MRLPNPLVLAAIYGLSELYLALTRRSQTQTVSRDRSSLILLWTIIIVSLWSGIQMVWLFPGVTVPYPSGFYLFGF
Ga0134070_103668112	3300010301	Grasslands Soil	MRLPNPLVLAAIYGLSELYLALTRRSQTQTVSRDRRSLILLWTIIIASLWSGIQMVRLFPSATVPCPS
Ga0134070_103729652	3300010301	Grasslands Soil	MRLPNPLVLAAIYGLSELYLALTRRSRTQAISRDRRSLMLLWTIIIVSLWL
Ga0134067_100990631	3300010321	Grasslands Soil	MRLPHPLVLTAIYGLSELYLALTRRSRTQAISRDRRSLMLLWTIIIVSLWLGMQMVWLFRSATMRYLREFYLVGFLLF
Ga0134062_105073491	3300010337	Grasslands Soil	MRLPNPLLLAAIYGLSELYLAFTRHSRTQSISHDHRSLILLWTVIIVSLWLGIQMVWLFPSATLQYPVG
Ga0126370_105853771	3300010358	Tropical Forest Soil	MRFPNPLVLGAIYGLSELYLALTRRSQPQAVSRDRSLILLWSVIVVSLWLGIQMVWLFPGAVVLFPTALYIF
Ga0126376_127731031	3300010359	Tropical Forest Soil	MILAALYGLSELYLAVTRRSGMQAVSHDRHSQIFLWTVIIV
Ga0126379_115476252	3300010366	Tropical Forest Soil	MRFPNPLLLAAIYGLSELYLAITRRSQTQAVSHDRRSLVLLWTAIVISLWLGVQMIWLFPRAIVPFPAALYIFGFILFLAGL
Ga0137392_100524401	3300011269	Vadose Zone Soil	MRLPDPLLLGAIYGLSELYLALTRRAPARATSRDRHSLILLWAVIIVSLWFGVQMVWLVPGATLPHPDGFY
Ga0137391_104882234	3300011270	Vadose Zone Soil	MMRLPNPLLLGAIYGLSELYLAVTRRSRTQAVSHDRRSLILLWTVIVV
Ga0137388_104607153	3300012189	Vadose Zone Soil	MMRLPNPLLLGAIYGLSELCLAFTRRSRAQAVSPDRRSLILLWTVI
Ga0137383_110332472	3300012199	Vadose Zone Soil	MRLPNPLLLGALYGLSELYLAFTRHSRTQAVSRDRRSLFLLWTVIAVSLWLG
Ga0137381_112500422	3300012207	Vadose Zone Soil	MRLPNPLLLGALYGLSELYLAFTRHSRTQAVSRDRR
Ga0137376_104833751	3300012208	Vadose Zone Soil	MRLPNPLVLGAIYGLSELYLAFTRHSRTQGVSRDRRSLFLLWAVIIVSLWLGIQMIWLYPRATLPYLRGF
Ga0137376_107744092	3300012208	Vadose Zone Soil	MRWPDPLLLGTIYGLSELYLAVTRRSRTRALYRDRYTLYILWAVIIVSIFLAIQ
Ga0137379_102077263	3300012209	Vadose Zone Soil	MRLPNPLLLGAIYGLSELYLAVTRRSRTQAVSHDRRSLILLWTVI
Ga0137379_113899041	3300012209	Vadose Zone Soil	MRLPNPLLLGALYGLSELYLAFTRHSRTQAVSQDRRSLFLLWTVIAVSLWLGIQMIWLFPEATFPYLR
Ga0137378_105013333	3300012210	Vadose Zone Soil	MRLPNPLVLGAIYGLSELYLAFTRHSRTQAVSRDRRSLFLLWAVIIVSLWLGIQMIW
Ga0137377_104323061	3300012211	Vadose Zone Soil	MRLPNPLLLGAIYGLSELYLAVTRRSRTQAVSHDGRSLILLWTVIA
Ga0137377_104350591	3300012211	Vadose Zone Soil	MRLPNPLVLGAIYGLSELYLAFTRHSRKQAVSRERGSLFLLWAVIIVSLWLGIQMIWLYPRATLPYLRGFY
Ga0137387_113334321	3300012349	Vadose Zone Soil	MRLPNPLLLGVLYGLSELYLAFTRHSRTQAVSQDRRSLFLLWTVIAVSLW
Ga0137386_112055361	3300012351	Vadose Zone Soil	MRFPNPLLLGAIYGLSELYLAFTRRSRAQAVSHDRRSLILLWTVIAVSLWLGIQMIWLVPGAIVPYPRGFYLFGFILFLGALA
Ga0137367_111451031	3300012353	Vadose Zone Soil	MRLPNPLLLAALYGLSELYLAFTRHSRTQAVSKDRRSLF
Ga0137371_111932111	3300012356	Vadose Zone Soil	MRLPNPLLLGVVYGLSELYLAFTRHSRSQAVSRDRSSLFVLWAVIAASLWLGIQMVWLLPGATVPYSTGFYFL
Ga0137385_106818551	3300012359	Vadose Zone Soil	MRLPDPLLLGAIYGLSELYLALTRRAPTRATSHDRRSLILL
Ga0137361_115725131	3300012362	Vadose Zone Soil	MRLPDPLLLGAIYGLSELYLAFTRRARVGATSRDRHSLILLWA
Ga0137373_110523191	3300012532	Vadose Zone Soil	MRLPNPLVLAAIYGLSELYLALTRRSQTQAVSLDRRSLILLWTII
Ga0137358_110477931	3300012582	Vadose Zone Soil	MRLPNPLVLGAIYGLSELYLAFTRHSRKQVVSRERGSLFLLWAVIIVSLWLGIQMKWLYPTATLPYLRGFYFF
Ga0137396_100110541	3300012918	Vadose Zone Soil	MRLPNPLVLGAIYGLSELYLAFTRHSRTQAVSRDRRSLFLLWAVIIVSLWLG
Ga0137416_119924582	3300012927	Vadose Zone Soil	MLLGAIYGLSELYLAFTRRAAVRATSRDRHSLILLWAVTIVSFWCGVQMVWLVPGATVPHPGGFYL
Ga0137404_113656342	3300012929	Vadose Zone Soil	MRLPNPLVLGAIYGLSELYLAFTRHSRKQVVSRERGSLFLLWAVIIVSLWLGIQM
Ga0120127_100510831	3300013503	Permafrost	MRLPDPLLLGAIYGLSELYLAFTRRSRTRVLSRDRR
Ga0134079_105958112	3300014166	Grasslands Soil	MRLPNPLVLAAIYGLSELYLALTRRSQTQTVSRDRRSLILLWTIIIASLWSGIQM
Ga0157377_116892912	3300014745	Miscanthus Rhizosphere	MRLPNPLLLAALYGLSELYLAFTRHSRTQAVSRDRSLLLLWTLIIASLCLGIQMIWLFPKAVLPYPRG
Ga0137418_108080832	3300015241	Vadose Zone Soil	MRLPDPLLLGAIYGLSELYLAFTRRARAGATSRDRHSLILLWAVTIVSFWCGVQMVWLVPGATVPHPGGFYLIGFCLFLGGLILRWYSIG
Ga0134085_103842372	3300015359	Grasslands Soil	MRLPNPLVLGAIYGLSELYLAVTRRSRAQALSHDRRSLFLLWAVIIVSIWLGIQMVWLCPGAAVAFRGQLYVFGFILFLGGL
Ga0134069_11165352	3300017654	Grasslands Soil	MMRLPNPLLLGAIYGLSELYLALTRRSRAQAVSHDRRSLIFLWTVIVVS
Ga0134074_10389621	3300017657	Grasslands Soil	MMRLPNPLLLGAIYGLSELYLAVTRRSRAQAVSHDRRSLILLWTVIAVSLWLGIQMIWLFPSVTVPYPRGFYLFGFILFL
Ga0187821_104009931	3300017936	Freshwater Sediment	MRFLNPLWLGAIYGLSELYLAITRQSRRASSRDQGSLVVLW
Ga0184608_100520423	3300018028	Groundwater Sediment	MRLPNPLLLGALYGLSELYLAFTRHSRTQAISRDRRSLFLLWTVITVSLWLG
Ga0184608_101148441	3300018028	Groundwater Sediment	MRLPDPLVLAAIYGLSELYLALTRRSGTQAISRDRRSLMLLWAIIIFSLWLGIQMVWLFPSA
Ga0184608_102671821	3300018028	Groundwater Sediment	MRLPNPLVLGAIYGLSELYLAFTRHSRKQAVSRERGSLFLLWAVIIVSLWLGI
Ga0184619_104508331	3300018061	Groundwater Sediment	MRLPDPLVLAAIYGLSELYLALTRRSGTQAISRDRRSLMLLWAIIIFSLWLG
Ga0184625_105880111	3300018081	Groundwater Sediment	MRLPNPLLLAALYGLSELYLAFTRHSRTQAVSRDRRSLFLLWTVIIVSLWLGIQMIW
Ga0193713_10408583	3300019882	Soil	MRLPNPLVLGAIYGLSELYLAFTRHSRKQAVSRERGSLFLLWAVIIVS
Ga0193743_12412021	3300019889	Soil	MRLPNPLLLAALYGLSELYLAFTRHSRTQAVSRDRRSL
Ga0193731_10872911	3300020001	Soil	MRLPDPLVLGAIYGLSELYLAFTRHSRKQAVSRERGSLFLLWAVIIVSLW
Ga0193730_10178691	3300020002	Soil	MRLPDPLVLAAIYGLSELYLALTRRSGTQAISRDRRSLMLLWAIIIVSLWLGIQMVWLFPNATVRYPRGFY
Ga0193755_11059811	3300020004	Soil	MRLPNPLVLGAIYGLSELYLAFTRHSRKQAVSRERGSLFLLWVVIIVSLWLG
Ga0193757_10116441	3300020008	Soil	MRLPNPLVLGAIYGLSELYLAFTRHSRKQAVSRERGSLFLLWVVIIVS
Ga0193749_10576741	3300020010	Soil	MRLPDPLVLAAIYGLSELYLALTRRSQTQAVSRDRRSLILLWTI
Ga0193733_10156562	3300020022	Soil	MRLPDPLVLAAIYGLSEVYLALTRRSGTQAISRDRRSLMLLWAIIIVSLWLGIQMVWLFPNATVRYPRGFY
Ga0193745_10233722	3300020059	Soil	MRLPDPLVLAAIYGLSEVYLALTRRSGTQAISRDRRSLMLLWAIIIFSLWLGIQMVWLFPSATVRYP
Ga0210378_103979952	3300021073	Groundwater Sediment	MRLPNPLLLAALYSLSELYLALTRHSRTLAVSRDRSLFLLW
Ga0210382_102839431	3300021080	Groundwater Sediment	MRLPDPLVLAAIYGLSELYLALTRRSGTQAISRDRRSLMLLWAIIIVSLWLGIQMVWLFPNATVRYPRG
Ga0224452_12124911	3300022534	Groundwater Sediment	MRLPNPLLLAALYGISELYLAFTRHSRTQAVSRDRRSLFLLWTIIIVSLWLGIQMIWLYPRATVPYPRGFYFLGFILFL
Ga0207685_102519371	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MRLPNSLVLAAIYGLSELYLALTRRSRTQAISRDRRSLMLLWTIIIVSLWLGIQMV
Ga0207685_108142202	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MRLPNPLVLGAIYGLSELYLAVTRRSRAQALSHDRRSLFLLWAVIIVSIWLGIQMVWLRPGAAVAFRGQL
Ga0207657_104907972	3300025919	Corn Rhizosphere	MRLPNPLLLAALYGLSELYLAFTRHSRTQAVSRDRSLLLLWTVIIASLCLGIQMIWLFPKAVLP
Ga0207646_100120399	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRLPDPLVLAAIYGLSELYLALTRRSGTQAISRDRRSLMLLWATIIVSLWLGIQMVWLSPNATVR
Ga0207646_108654712	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRLPDPLLLGAIYGLSELYLAVTRRAPARATSRDRHSLILLWAVIIVSLWFGVQMVWLVPGATL
Ga0207646_110985133	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MMRLPNPLLLGAIYGLSELYLAVTRRSRTQVVSHDRRSLILLWTVIVVSLWLGIQMIRLVPFATVPYPRGFY
Ga0207665_109583331	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRLPDPLLLGAIYAVSELYLAFTRRAVARATSRDRHSLILLWAVIIVSLWFGVQMVWLVPGA
Ga0207668_118899922	3300025972	Switchgrass Rhizosphere	MRLPNPLLLAALYGLSELYLAFTRHSRTQAVSQDRRSLFLLWTVII
Ga0209153_12962042	3300026312	Soil	MRLPNPLVLAAIYGLSELYLALTRRSRTQAISRDRRSLMLLWTIIIVSLWLGMQWSGS
Ga0209686_11105011	3300026315	Soil	MRLPNPLVLAAIYGLSELYLALTRRSQTQAVSRDRRSLILLWTIIIVSLWFGIQMVWLF
Ga0209155_12299572	3300026316	Soil	MRLPNPLVLAAIYGLSELYLALTRRSRTQAISRDRRSLMLLWTIIIVSLWLG
Ga0209470_100073324	3300026324	Soil	MRLPNPLVLAAIYGLSELYLALTRRSQTQTVSRDRRSLILLWTIIIASLWSGIQMVRLFPSATV
Ga0209377_10563593	3300026334	Soil	MRLPDPLLLGAIYGLSELYLAFTRRARAGATSRDRHSLILLWAVIIASLWFGVQMVWLAPGATVPHPGGFY
Ga0209804_10996221	3300026335	Soil	MRLPNPLVLGAIYGLSELYLAFTRHSRTQAVSRDRRSLFLLWAVIIVSLWLGIQMIWLYPSATLPYPRGFYFFGFILFLGGLALR
Ga0209159_10183225	3300026343	Soil	MRLPNPWVLAAIYGLSELYLALTRRSQTQTVSRDR
Ga0257146_10271353	3300026374	Soil	MRLPDPLVLAAIYGLSELFLALTRRSRTQAVSRDRHSLILLWTIIVVSLWFGI
Ga0209808_12807042	3300026523	Soil	MRLPNPLLLGAIYGLSELYLAVTRRSRTQAVSHDRRSLILLWTVIAVSLWLGIQMIWLFPSVTVPYPRGFYLFG
Ga0209059_11924781	3300026527	Soil	MRLPDPLLLGAIYGLSELYLAFTRRAGAGATSRDRHSLILLWAVIIASLWFGVQMV
Ga0209806_11985652	3300026529	Soil	MRLPNPLLLGAIYGLSELYLAVTRRSRTQAVSHDRRSLILLWTVIAVSLWLGIQMIWLFPSAAVPYP
Ga0209474_101263301	3300026550	Soil	MRLPDPLVLAAIYGLSELYLALTRRSGTQAISRDRRSLMLLWAIIIVSLWLGIQMVWLLPNAAVRYSREF
Ga0209577_104368501	3300026552	Soil	MRLPDPLLLGAIYGLSELYLAFTRRARAGATSRDRHSLILLWAVIIVSFWFGVQMVWLAPGATVPHPGGFYLIGFCLFLGGLILRWY
Ga0179587_103099352	3300026557	Vadose Zone Soil	MRLPNPLVLGAIYGLSELYLAFTRHSRKQVVSRERGSLFLLWAVIIVSLWLGIQMIWLYPRATLPYLRGFYIFGFILFLGGLA
Ga0209009_10565872	3300027667	Forest Soil	MRLPDPLLLGAIYGLSELYLAFTRRAAVRATSRDRHSLILLWAVTIVSFWCGLQMVWLVP
Ga0209488_100377053	3300027903	Vadose Zone Soil	MRLPNPLVLAAIYGLSELYLALTRRSQTQAVSRDRRSLILLWTIIVVSLWFGIQMVWLFPGATVPYLRGFYLFG
Ga0307287_102905171	3300028796	Soil	MRLPNPLLLAAIYGLSELYLAFTRHSRTQSISRDRGSLMLLWTVIIVSLWLGIQMVWLFPSATLPYPGGFYLF
Ga0307305_102037082	3300028807	Soil	MRLPNPLVLAAIYGLSELYLALTRRSQTQAVSRDRRSLIPLWTIIIVSLWFGIQMVWLFPGATVPYLRGF
Ga0307312_108065512	3300028828	Soil	MRLPNPLLLAALYGLSELYLAFTRHSRTQAVSRDRRSLFLLWTVIIVSLWLGIQMIWLFPKASLP
Ga0307476_113123772	3300031715	Hardwood Forest Soil	MRLPDPLLLGAIYGLSELYLAFTRRARAGATSRDRHSLVLLWAVIIVSFWLGVQMVWLVPGATVPYPGGFYLIGFCLFLG
Ga0307469_111205441	3300031720	Hardwood Forest Soil	MRLPDPLLLAALYGLSELYLAFTRHSRTQAVSRDRRSLFLLWTVIIVSLWLGIQMIWLFPRATLPYLRGFYLFGFLLFLGGLILR
Ga0307479_117440401	3300031962	Hardwood Forest Soil	MRLPNSLVLAAIYGLSELYLALTRRSRTQAISRDR
Ga0310812_102193241	3300032421	Soil	MRLPNPLVLGAIYGLSELYLAVTRRSRAQALSHDRRSLFLLWAVIIVIIWLGIQMVWL
Ga0310810_103546553	3300033412	Soil	MRLPNPLVLGAIYGLSELYLAVTRRSRAQALSHDRRSLFLLWAVIIVSIWLGIQMVWLCPGAAVAFRGQLYVFGFILFLG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064163

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences