Metagenome / Metatranscriptome Family F064153

Basic Information
Family ID	F064153
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	39 residues
Representative Sequence	VPSAKLYPRTALILLTALNLLNYIDRSVLFAVQPLVQ
Number of Associated Samples	116
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.06 %
% of genes near scaffold ends (potentially truncated)	97.67 %
% of genes from short scaffolds (< 2000 bps)	87.60 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Most Common Taxonomy
Group	Bacteria (90.698 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (14.729 % of family members)
Environment Ontology (ENVO)	Unclassified (28.682 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.039 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.62% β-sheet: 0.00% Coil/Unstructured: 55.38%
Feature Viewer

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Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF14489	QueF	50.39
PF13442	Cytochrome_CBB3	4.65
PF09722	Xre_MbcA_ParS_C	3.88
PF05015	HigB-like_toxin	3.10
PF01381	HTH_3	3.10
PF13533	Biotin_lipoyl_2	3.10
PF12867	DinB_2	2.33
PF13231	PMT_2	1.55
PF08808	RES	1.55
PF03544	TonB_C	1.55
PF13432	TPR_16	1.55
PF13419	HAD_2	0.78
PF01513	NAD_kinase	0.78
PF12840	HTH_20	0.78
PF05036	SPOR	0.78
PF14534	DUF4440	0.78
PF01479	S4	0.78
PF12700	HlyD_2	0.78
PF12852	Cupin_6	0.78
PF02537	CRCB	0.78
PF02469	Fasciclin	0.78
PF16576	HlyD_D23	0.78
PF01713	Smr	0.78
PF03795	YCII	0.78
PF03551	PadR	0.78
PF05593	RHS_repeat	0.78
PF01145	Band_7	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	3.10
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	1.55
COG5654	Predicted toxin component of a toxin-antitoxin system, contains RES domain	Defense mechanisms [V]	1.55
COG0239	Fluoride ion exporter CrcB/FEX, affects chromosome condensation	Cell cycle control, cell division, chromosome partitioning [D]	0.78
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.78
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.78
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.78
COG2335	Uncaracterized surface protein containing fasciclin (FAS1) repeats	General function prediction only [R]	0.78
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.70 %
Unclassified	root	N/A	9.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.70 %
Unclassified	root	N/A	9.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.70 %
Unclassified	root	N/A	9.30 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	64.34 %
Unclassified	root	N/A	9.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.33 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	31.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	27.91 %
Unclassified	root	N/A	9.30 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.55 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.78 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	27.91 %
Unclassified	root	N/A	9.30 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	27.91 %
Unclassified	root	N/A	9.30 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	1.55 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.78 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.78 %
Unclassified	root	N/A	9.30 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	8.53 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	3.10 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	3.10 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	1.55 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.78 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.78 %
Unclassified	root	N/A	9.30 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.88 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	3.10 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1.55 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.78 %
Hymenobacteraceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae	0.78 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.78 %
Unclassified	root	N/A	9.30 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.88 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	3.10 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1.55 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.78 %
Hymenobacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	0.78 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.78 %
Unclassified	root	N/A	9.30 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.88 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	3.10 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1.55 %
unclassified Hymenobacter	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter → unclassified Hymenobacter	0.78 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.78 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	31.78 %
Unclassified	root	N/A	9.30 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.88 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	3.10 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1.55 %
Hymenobacter sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter → unclassified Hymenobacter → Hymenobacter sp.	0.78 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.78 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573000\|GPBTN7E02IGLVF	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	520	Open in IMG/M
3300000567\|JGI12270J11330_10034823	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2895	Open in IMG/M
3300001356\|JGI12269J14319_10097371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1462	Open in IMG/M
3300002074\|JGI24748J21848_1020913	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	789	Open in IMG/M
3300003505\|JGIcombinedJ51221_10364237	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300004472\|Ga0068974_1398700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6263	Open in IMG/M
3300004499\|Ga0068984_1082023	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	528	Open in IMG/M
3300004643\|Ga0062591_100729154	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	901	Open in IMG/M
3300005171\|Ga0066677_10202169	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1112	Open in IMG/M
3300005535\|Ga0070684_102249167	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	514	Open in IMG/M
3300005542\|Ga0070732_10002995	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	9098	Open in IMG/M
3300005548\|Ga0070665_101392364	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	710	Open in IMG/M
3300005558\|Ga0066698_10280643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1153	Open in IMG/M
3300005575\|Ga0066702_10017408	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3420	Open in IMG/M
3300005587\|Ga0066654_10823485	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300005591\|Ga0070761_10998867	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	531	Open in IMG/M
3300005602\|Ga0070762_10327766	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	971	Open in IMG/M
3300005602\|Ga0070762_10783469	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300005712\|Ga0070764_10944423	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	542	Open in IMG/M
3300006028\|Ga0070717_11470331	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300006032\|Ga0066696_10892232	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300006034\|Ga0066656_10539257	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300006046\|Ga0066652_100622106	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300006163\|Ga0070715_10353663	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300006173\|Ga0070716_101398632	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	569	Open in IMG/M
3300006174\|Ga0075014_100726525	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300006176\|Ga0070765_100188738	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1864	Open in IMG/M
3300009090\|Ga0099827_11231940	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter → unclassified Hymenobacter → Hymenobacter sp.	651	Open in IMG/M
3300009143\|Ga0099792_10442129	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	804	Open in IMG/M
3300009521\|Ga0116222_1166275	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300009522\|Ga0116218_1087048	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1422	Open in IMG/M
3300009683\|Ga0116224_10406619	All Organisms → cellular organisms → Bacteria → Proteobacteria	648	Open in IMG/M
3300009759\|Ga0116101_1081533	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300009824\|Ga0116219_10460079	Not Available	706	Open in IMG/M
3300009839\|Ga0116223_10175919	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300010360\|Ga0126372_10241847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1541	Open in IMG/M
3300010379\|Ga0136449_102751253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300011058\|Ga0138541_1008303	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	755	Open in IMG/M
3300011075\|Ga0138555_1067698	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	788	Open in IMG/M
3300012204\|Ga0137374_11018809	Not Available	597	Open in IMG/M
3300012207\|Ga0137381_10272698	All Organisms → cellular organisms → Bacteria	1472	Open in IMG/M
3300012361\|Ga0137360_10126196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1997	Open in IMG/M
3300012685\|Ga0137397_10209865	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300012685\|Ga0137397_11217143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300012917\|Ga0137395_10627770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300012971\|Ga0126369_12201042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300012988\|Ga0164306_10505078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	931	Open in IMG/M
3300013100\|Ga0157373_11359257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300014154\|Ga0134075_10198857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300014162\|Ga0181538_10402735	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300014199\|Ga0181535_10380387	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300016702\|Ga0181511_1447855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2184	Open in IMG/M
3300017823\|Ga0187818_10264108	Not Available	753	Open in IMG/M
3300017934\|Ga0187803_10191868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300017955\|Ga0187817_10174715	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1368	Open in IMG/M
3300017955\|Ga0187817_10791202	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300017955\|Ga0187817_10924338	Not Available	558	Open in IMG/M
3300017955\|Ga0187817_11019436	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300017961\|Ga0187778_10712624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300017961\|Ga0187778_11243614	Not Available	523	Open in IMG/M
3300017970\|Ga0187783_10149157	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1723	Open in IMG/M
3300017970\|Ga0187783_10857231	Not Available	655	Open in IMG/M
3300017973\|Ga0187780_11074325	Not Available	588	Open in IMG/M
3300017995\|Ga0187816_10239304	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	791	Open in IMG/M
3300018006\|Ga0187804_10034190	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1927	Open in IMG/M
3300018025\|Ga0187885_10136770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1167	Open in IMG/M
3300018025\|Ga0187885_10415656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	602	Open in IMG/M
3300018040\|Ga0187862_10414384	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300018085\|Ga0187772_11166049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300018086\|Ga0187769_10677842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300018088\|Ga0187771_10813161	All Organisms → cellular organisms → Bacteria → Acidobacteria	793	Open in IMG/M
3300018482\|Ga0066669_10072881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2278	Open in IMG/M
3300019284\|Ga0187797_1424783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300019890\|Ga0193728_1170279	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	940	Open in IMG/M
3300020199\|Ga0179592_10239584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300020580\|Ga0210403_11054914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300020580\|Ga0210403_11262829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300020582\|Ga0210395_10290050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1230	Open in IMG/M
3300021406\|Ga0210386_10611551	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300021407\|Ga0210383_10892578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300021433\|Ga0210391_10275453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1320	Open in IMG/M
3300021433\|Ga0210391_11221547	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300025906\|Ga0207699_10449601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	924	Open in IMG/M
3300027497\|Ga0208199_1089734	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300027521\|Ga0209524_1084117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300027562\|Ga0209735_1027820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1177	Open in IMG/M
3300027641\|Ga0208827_1132758	Not Available	706	Open in IMG/M
3300027648\|Ga0209420_1101785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300027667\|Ga0209009_1093527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300027696\|Ga0208696_1010588	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3773	Open in IMG/M
3300027725\|Ga0209178_1397654	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300027727\|Ga0209328_10222110	Not Available	568	Open in IMG/M
3300027825\|Ga0209039_10392789	Not Available	531	Open in IMG/M
3300027854\|Ga0209517_10112019	All Organisms → cellular organisms → Bacteria	1814	Open in IMG/M
3300027875\|Ga0209283_10892652	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300027879\|Ga0209169_10409097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300027911\|Ga0209698_10088522	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2612	Open in IMG/M
3300028773\|Ga0302234_10009911	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4920	Open in IMG/M
3300028807\|Ga0307305_10504738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300028873\|Ga0302197_10428591	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300029952\|Ga0311346_10243030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	1935	Open in IMG/M
3300029999\|Ga0311339_10031005	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7631	Open in IMG/M
3300030000\|Ga0311337_10016069	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5800	Open in IMG/M
3300030049\|Ga0302191_10231469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300030114\|Ga0311333_10758490	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300030494\|Ga0310037_10303263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300030518\|Ga0302275_10067485	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2561	Open in IMG/M
3300030618\|Ga0311354_10602756	All Organisms → cellular organisms → Bacteria → Acidobacteria	1066	Open in IMG/M
3300030659\|Ga0316363_10280240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300030707\|Ga0310038_10349439	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300030737\|Ga0302310_10731248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300031231\|Ga0170824_118661239	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300031231\|Ga0170824_128860533	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300031236\|Ga0302324_100066394	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6343	Open in IMG/M
3300031715\|Ga0307476_11024140	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300031718\|Ga0307474_11043781	Not Available	647	Open in IMG/M
3300031754\|Ga0307475_10083746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2464	Open in IMG/M
3300031754\|Ga0307475_10806013	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300031941\|Ga0310912_10282365	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300032059\|Ga0318533_10949771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300032090\|Ga0318518_10524466	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	606	Open in IMG/M
3300032174\|Ga0307470_10014078	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3417	Open in IMG/M
3300032205\|Ga0307472_101430348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300032898\|Ga0335072_10987462	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300033158\|Ga0335077_10679750	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1063	Open in IMG/M
3300033826\|Ga0334847_018525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300034163\|Ga0370515_0092464	All Organisms → cellular organisms → Bacteria → Acidobacteria	1308	Open in IMG/M
3300034163\|Ga0370515_0260774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.67%
Host-Associated	Host-Associated	2.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.72%
Aquatic	Environmental → Aquatic	13.95%
Plants	Host-Associated → Plants	2.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.42%
Freshwater	Environmental → Aquatic → Freshwater	12.40%
Peat	Environmental → Terrestrial → Peat	9.30%
Sediment	Environmental → Aquatic → Sediment	1.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.39%
Loam	Environmental → Terrestrial → Soil → Loam	13.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.08%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	9.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.30%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	9.30%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.20%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	14.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.20%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.10%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.10%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.55%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.55%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.55%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.78%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.78%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300002074	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1	Host-Associated	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004472	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004499	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 82 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011058	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 22 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011075	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 36 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033826	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 1-5	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064153

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N55_03270700	2189573000	Grass Soil	VSQTDLQPRTALIVLTALNLLNYVDRNVLFAVQPLV
JGI12270J11330_100348236	3300000567	Peatlands Soil	MARTTYPLATLALLTAINFVNYIDRSVLFAVQPLVQ
JGI12269J14319_100973714	3300001356	Peatlands Soil	MVYSRHRMARKTYPLATLALLTAINFVNYIDRSVLFAVQ
JGI24748J21848_10209131	3300002074	Corn, Switchgrass And Miscanthus Rhizosphere	VVDSHNLVTDKQLYPRTALIVLTLLNLVNYVDRSVLNAVQPLVQ
JGIcombinedJ51221_103642371	3300003505	Forest Soil	MLFARPVVQTKLYPRTALVLLTALNLLNYIDRSVLNAVQPLIQ
Ga0068974_13987001	3300004472	Peatlands Soil	LIASRPKLYPRTALALLTALNLFNYIDRSVLFAVQDLVKA
Ga0068984_10820231	3300004499	Peatlands Soil	LIASRPKLYPRTALALLTALNLFNYIDRSVLFAVQDLVKAEFH
Ga0062591_1007291541	3300004643	Soil	MINSHNPVTDKRLYPRTALIVLTLLNLVNYVDRSVLNAVQPLVQ
Ga0066677_102021693	3300005171	Soil	VSSTRLYPRMALVVLTALNLLNYIDRSVLNAVQPLIQNEFH
Ga0065705_107022892	3300005294	Switchgrass Rhizosphere	MINSHNPVTDKRLYPRTALIVLTLLNLVNYVDRSVLNAVQPLVQSEFQL
Ga0070684_1022491671	3300005535	Corn Rhizosphere	VTERKLYPWTALVLLTTLNFLNYIDRSVLFAVQPLVQTEFR
Ga0070732_100029951	3300005542	Surface Soil	VSQSELQPRTALILLTALNLLNYVDRNVLFAVQPL
Ga0070665_1013923641	3300005548	Switchgrass Rhizosphere	MINSHNPVTDKRLYPRTALIVLTLLNLVNYVDRSVLNAVQPLVQSE
Ga0066698_102806431	3300005558	Soil	VPSAKLYPRTALILLTALNLLNYIDRSVLFAVQPLVQ
Ga0066702_100174081	3300005575	Soil	VSQKNLQPRTALIVLTALNLLNYADRNVLFAVQPLV
Ga0066654_108234851	3300005587	Soil	VASAHLYPRTALVLLTALNLLNYIDRSVLFAVQPLV
Ga0070761_109988672	3300005591	Soil	VAQNDLQPRTALIVLTALNLLNYVDRNVLFAVQPLVQDEFHL
Ga0070762_103277663	3300005602	Soil	VAADNLHPRTALLLLTSLNLLNYADRNVLFAVQPLVQDEF
Ga0070762_107834691	3300005602	Soil	VPPIKLYPRTALALLTTLNLLNYIDRSVLFAVQPLV
Ga0070764_109444231	3300005712	Soil	VAQTDLQPRTALIVLTALNLLNYVDRNVLFAVQPLVQDE
Ga0070717_114703311	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VTPRKLYPWTALFILTTLNFLNYIDRSVLFAVQPLVQSEFRLTN
Ga0066696_108922321	3300006032	Soil	MPPRSYARLALVLLTGLNFLNYIDRSVLFAVQPLV
Ga0066656_105392572	3300006034	Soil	VASKDLHPRTALIVLTALNLLNYADRNVLYAVQPLVQDEFHLTKT
Ga0066652_1006221063	3300006046	Soil	MLRFRSTVSSRKLYPRTALVVLTALNLVNYIDRSVLFAVQPLV
Ga0070715_103536631	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VTQTKLYPWTALTVLTALNLLNYIDRSVLFAVQPLVQA
Ga0070716_1013986322	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VVYSCQVTPRKLYPWTALVILTALNFLNYIDRSVLFAVQPL
Ga0075014_1007265252	3300006174	Watersheds	VAQSDLQPRTALIVLTALNLLNYADRNVLFAVQPL
Ga0070765_1001887385	3300006176	Soil	VLYSLDPVKSAKLYPRTALILLTALNLLNYVDRSV
Ga0099827_112319401	3300009090	Vadose Zone Soil	VTGTKLYPRTALALLTALNLLNYVDRSVLFAVQPL
Ga0099792_104421291	3300009143	Vadose Zone Soil	VTSENLQPRTALIVLTALNLLNYADRNVLFAVQPLV
Ga0116222_11662751	3300009521	Peatlands Soil	MARKTYPMAALALLTAINFVNYIDRSVLFAVQPLVQAEFKF
Ga0116218_10870483	3300009522	Peatlands Soil	VTRTDLQPRTALIVLTALNLLNYADRNVLFAVQPLVQDEFHLTKE
Ga0116224_104066193	3300009683	Peatlands Soil	VTPQNLHARSALLVLTALNLLNYVDRNVLFAVQPLVQ
Ga0116101_10815333	3300009759	Peatland	VSEAKLYPRTALALLTTLNLLNYVDRSVLFAVQPLVQ
Ga0116219_104600791	3300009824	Peatlands Soil	MARKTYPLATLVLLTAINFVNYIDRSVLFAVQPLVQAE
Ga0116223_101759191	3300009839	Peatlands Soil	MARKTYPLATLALLTAINFVNYIDRSVLFAVQPLVQAE
Ga0126372_102418473	3300010360	Tropical Forest Soil	VPQNKLYPPTALILLTALNLLNYVDRNVLFAVQPLVQDEF
Ga0136449_1027512532	3300010379	Peatlands Soil	VAQNDLQPKTALIVLTALNLLNYADRNVLFAVQPLVQDEF
Ga0138541_10083033	3300011058	Peatlands Soil	LIASRPKLYPRTALALLTALNLFNYIDRSVLFAVQ
Ga0138555_10676983	3300011075	Peatlands Soil	LIASRPKLYPRTALALLTALNLFNYIDRSVLFAVQDL
Ga0137374_110188092	3300012204	Vadose Zone Soil	VSETNFNPKTALTILTALNLLNYVDRNVLYAVQPLVQDEFHINK
Ga0137381_102726981	3300012207	Vadose Zone Soil	VPPKNLHPRTALIVLTALNLLNYADRNVLYAVQPLVQDEFHLTH
Ga0137360_101261961	3300012361	Vadose Zone Soil	VADKKLYPKLALALLTALNLLNYIDRSVLFAVQEGRHPHL*
Ga0137397_102098651	3300012685	Vadose Zone Soil	VAPKKLHPRTALIVLTALNLLNYADRNVLYAVQPLVQDE
Ga0137397_112171432	3300012685	Vadose Zone Soil	VANVRLYPRTALVLLTALNLLNYIDRSVLFAVQPLVQAE
Ga0137395_106277702	3300012917	Vadose Zone Soil	VTQRKLYPWTALVLLTTLNFLNYIDRSVLFAVQPLVQTEFKLTNA
Ga0126369_122010421	3300012971	Tropical Forest Soil	VSQKHLQPKTALIILTALNLLNYADRNVLFAVQPLVQDE
Ga0164306_105050783	3300012988	Soil	VTPRKLYPWTALIILTALNFLNYIDRSVLFAVQPLV
Ga0157373_113592571	3300013100	Corn Rhizosphere	MLYSASVPPEKLYPRTALALLTALNLLNYIDRSVLFAVQPL
Ga0134075_101988571	3300014154	Grasslands Soil	VPSSKLYPRTALILLTALNLLNYIDRSVLFAVQPLVQ
Ga0181538_104027351	3300014162	Bog	VKPQKLQARTALLVLSVLNLLNYVDRNVLFAVQPLVQ
Ga0181535_103803873	3300014199	Bog	VTQTKLYPWTALTLLTALNLLNYIDRSVLNAVQPLIQNEFHV
Ga0181511_14478551	3300016702	Peatland	VTDRRLYPRTALLVLTALNLVNYVDRSVLNAVQPLVQVEFRLTKTQL
Ga0187818_102641082	3300017823	Freshwater Sediment	MARKTYPLAALALLTAINFVNYIDRSVLFAVQPLVQAEF
Ga0187803_101918681	3300017934	Freshwater Sediment	VADRKLYPRTALLVLTALNLLNYADRNVLFAVHPLV
Ga0187817_101747151	3300017955	Freshwater Sediment	VTPTKLYPWTALTLLTALNLLNYIDRSVLFAVQPLVQSE
Ga0187817_107912022	3300017955	Freshwater Sediment	MARKTYPLAALALLTAINFVNYIDRSVLFAVQPLVQAEFKF
Ga0187817_109243382	3300017955	Freshwater Sediment	MLYSRDRMARKTYPLATLALLTAINFVNYIDRSVLFAVQPLVQA
Ga0187817_110194361	3300017955	Freshwater Sediment	VASTKLYPRTTLIVLTALNLVNYIDRSVLFAVQPMIQ
Ga0187778_107126242	3300017961	Tropical Peatland	VAQKDLQPRTALIVLTALNLLNYADRNVLFAVQPLVQDEFHLTKE
Ga0187778_112436142	3300017961	Tropical Peatland	MARRTYPLAALVLLTAINFVNYIDRSVLFAVQPLVQ
Ga0187783_101491573	3300017970	Tropical Peatland	VPQKDLHPRTALIVLTALNLLNYVDRNVLFAVQPLVQ
Ga0187783_108572312	3300017970	Tropical Peatland	MARKTYPLATLALLTAINFINYIDRSVLFAVQPLV
Ga0187780_110743252	3300017973	Tropical Peatland	MARKTYPLAALVLLTAINFVNYIDRSVLFAVQPLVQAEF
Ga0187816_102393041	3300017995	Freshwater Sediment	VTSAKLQPRTALIVLTALNLLNYVDRNVLFAVQPLVQDEFHL
Ga0187804_100341903	3300018006	Freshwater Sediment	VAKSDLQPWTALTVLTALNLLNYVDRTVLFAVQPLV
Ga0187885_101367701	3300018025	Peatland	VTPAKLYPRTALALLTALNLLNYIDRSVLFAVQDL
Ga0187885_104156561	3300018025	Peatland	VAATKLYPRTALALLTALNLLNYVDRSVLFAVQPL
Ga0187862_104143843	3300018040	Peatland	VTQTKLYPWTALTLLTALNLLNYIDRSVLFAVQPL
Ga0187772_111660492	3300018085	Tropical Peatland	LPHAIVAGPVAQKDLQPRTALILLTALNLLNYVDRNVLFAVQPLV
Ga0187769_106778422	3300018086	Tropical Peatland	VTQTKLYPRTALIVLTSLNLLNYVDRNVLFAVQPLVQD
Ga0187771_108131611	3300018088	Tropical Peatland	MARKTYPLAALALLTAINFVNYIDRSVLFAVQPLVQAEFKFS
Ga0066669_100728811	3300018482	Grasslands Soil	VPAKKLYPKTALALLTALNLLNYIDRNVLYAVQDMVKAE
Ga0187797_14247832	3300019284	Peatland	VAQKDLQPRTALIVLTTLNLLNYADRNVLFAVQPLVQDEFHLTKE
Ga0193728_11702793	3300019890	Soil	VASSRLYPRTALVLLTALNLLNYVDRSVLFAVQPLVQADF
Ga0179592_102395841	3300020199	Vadose Zone Soil	VPPTKLYPRTALLVLTALNLVNYVDRSVLNAVQPLVQVEFQLTKTQL
Ga0210403_110549142	3300020580	Soil	MAKNDLHPWTALMVLTALNLLNYADRNVLFAVQPLVQA
Ga0210403_112628292	3300020580	Soil	VPDKKLYPKTALALLTALNLLNYIDRNVLFAVQELIKVEFA
Ga0210395_102900503	3300020582	Soil	VAQTDLQPRTALIVLTALNLLNYVDRNVLFAVQPLVQDEF
Ga0210386_106115513	3300021406	Soil	VPDRKLYPKTALALLTALNLLNYIDRNVLFAVQDLIK
Ga0210383_108925782	3300021407	Soil	VTSTKLYPWTALGLLTTLNLLNYVDRSVLFAVQPLVQTE
Ga0210391_102754534	3300021433	Soil	VTQTKLYPWTALTLLTTLNLLNYIDRSVLFAVQESER
Ga0210391_112215473	3300021433	Soil	VTSTKLYPRTALILLTALNLLNYVDRSVLFAVQPL
Ga0207699_104496011	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VTRKLYPKTALALLTALNLLNYIDRSVLYGVQDLIK
Ga0208199_10897341	3300027497	Peatlands Soil	VTSAKLHPRTALILLTALNLLNYVDRSVLFAVQPLVQ
Ga0209524_10841172	3300027521	Forest Soil	VTQRKLYPWTALVLLTTLNFLNYIDRSVLFAVQPLVQTEFR
Ga0209735_10278201	3300027562	Forest Soil	VPPTKLYPRTALLVLTALNLVNYIDRSVLNAVQPLVQVE
Ga0208827_11327582	3300027641	Peatlands Soil	MARKTYPLATLALLTAINFVNYIDRSVLFAVQPLVQ
Ga0209420_11017851	3300027648	Forest Soil	VTQTKFQARSALLVLTALNLLNYADRNVLFAVQPLVQD
Ga0209009_10935272	3300027667	Forest Soil	VPPTKLYPRTALALLTTLNLLNYIDRSVLFAVQPLVQ
Ga0208696_10105886	3300027696	Peatlands Soil	MARTTYPLATLALLTAINFVNYIDRSVLFAVQPLVQAE
Ga0209178_13976542	3300027725	Agricultural Soil	MSPKLYPRAALALLTGLNLMNYLDRSVLFAVQPLIQKELG
Ga0209328_102221102	3300027727	Forest Soil	VAETKLYPRTALVVLTALNLLNYADRNVLFAVQPL
Ga0209039_103927891	3300027825	Bog Forest Soil	VPSQKLHARTALLVLTALNLLNYADRNVLFAVQPL
Ga0209517_101120191	3300027854	Peatlands Soil	MLYSPSVTPPKLYPRTALLILTALNLLNYIDRSVLFAVQPLV
Ga0209283_108926521	3300027875	Vadose Zone Soil	VTPRKLYPWTALIILTALNFLNYIDRSVLFAVQPL
Ga0209169_104090971	3300027879	Soil	VAQTDLQPRTALIVLTALNLLNYVDRNVLFAVQPLV
Ga0209698_100885224	3300027911	Watersheds	MNNNKLHPWTALILLTALNLLNYVDRSILFAVQPLIQAELHRSKSD
Ga0302234_100099118	3300028773	Palsa	VATAKLHPRTALILLTALNLLNYVDRSVLFAVQPPVQSEF
Ga0307305_105047382	3300028807	Soil	VANVRLYPRTALILLTALNLLNYIDRSVLFAVQPLVQAE
Ga0302197_104285911	3300028873	Bog	VTSPKLYPRTALALLTALNLLNYVDRSVLFAVQPLVQSEF
Ga0311346_102430301	3300029952	Bog	VTSAKLQPRTALIVLTALNLLNYADRNVLFAVQPLV
Ga0311339_100310051	3300029999	Palsa	VTSEKLQPRTALIVLTALNLLNYVDRNVLYAVQPLIQE
Ga0311337_100160691	3300030000	Fen	VTQQKLYPRTALLVLTALNLLNYADRNVLFAVQPLVQ
Ga0302191_102314691	3300030049	Bog	VASTKLYPRTALALLTALNLLNYIDRSVLFAVQDLVKA
Ga0311333_107584903	3300030114	Fen	VAPTKLYPRTALLVLTALNLLNYADRNVLFAVQPLVQAE
Ga0310037_103032632	3300030494	Peatlands Soil	VTSTKLYPRAVLVLLTALNLLNYIDRSVLNAVQPLIQNEFHVT
Ga0302275_100674854	3300030518	Bog	VASTKLYPRTALALLTTLNLLNYIDRSVLFAVQDLV
Ga0311354_106027561	3300030618	Palsa	VTSAKLYPRTALALLTALNLLNYNDRSVLLAVQDLVKA
Ga0316363_102802401	3300030659	Peatlands Soil	VDDSKLYPRTALVVLTALNLLNYVDRNVLFAVQPLVQDEFHL
Ga0310038_103494392	3300030707	Peatlands Soil	VTQQKLHARTALLVLTALNLLNYADRNVLFAVQPLV
Ga0302310_107312482	3300030737	Palsa	VPQTKLYPRTALALLTALNLLNYVDRSVLFAVQDLV
Ga0170824_1186612391	3300031231	Forest Soil	VTQRDLQPRTALIVLTALNLLNYVDRNVLFAVQPLVQDE
Ga0170824_1288605332	3300031231	Forest Soil	VAQTDLQPRTALIVLAALNLLNYVDRSVLFAVQPLVQDE
Ga0302324_1000663941	3300031236	Palsa	VATTKLYPRTALALLTTLNLLNYIDRSVLYAVQDLV
Ga0307476_110241402	3300031715	Hardwood Forest Soil	VANTKLYPKTALALLTALNLFNYIDRSVLFAVQDL
Ga0307474_110437813	3300031718	Hardwood Forest Soil	VPATKLYPRTALILLTALNLLNYADRNVLFAVQPLVQNEFHLTK
Ga0307475_100837464	3300031754	Hardwood Forest Soil	VTRTKLYPRTALILLTALNLLNYIDRSVLFAVQPLVQHE
Ga0307475_108060132	3300031754	Hardwood Forest Soil	VPPNKLYPWTALTLLTALNLLNYADRNVLFAVQPLVQEEFHIN
Ga0310912_102823653	3300031941	Soil	VREGIKSPWVALGLLTTLNILNYVDRSVLFAVQPLIQ
Ga0318533_109497712	3300032059	Soil	VAATKLYPRTALVLLTSLNLLNYIDRSVLFAVQPLV
Ga0318518_105244661	3300032090	Soil	VPDKKLYPKTALAVLTALNLLNYIDRNVLFAVQDLIK
Ga0307470_100140785	3300032174	Hardwood Forest Soil	VTSPKTYPKLALALLTALNLLNYIDRSVLFAVQDLL
Ga0307472_1014303481	3300032205	Hardwood Forest Soil	VTETKLYPRTALALLTALNLFNYIDRSVLFGVQDL
Ga0335072_109874621	3300032898	Soil	VTDAKLYPRTALALLTTLNLLNYVDRSVLFAVQPLVQ
Ga0335077_106797503	3300033158	Soil	VTSRKLYPWTALIVLTALNLLNYIDRTVLFAVQTLVQDEF
Ga0334847_018525_1_120	3300033826	Soil	VNTTNLHPRTALILLTALNLLNYADRNVLFAVQPLVQAEF
Ga0370515_0092464_2_112	3300034163	Untreated Peat Soil	VLYSLDPVTSPKLYPRTALALLTALNLLNYIDRSVLF
Ga0370515_0260774_610_735	3300034163	Untreated Peat Soil	VTQTKLYPRTALALLTALNLLNYVDRSVLFAVQDLVKAEFHQ

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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