Metagenome / Metatranscriptome Family F064128

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064128
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	43 residues
Representative Sequence	MAQELIRDGKLDRQAAAEALRHFLENMVRVSGLELKVSVR
Number of Associated Samples	106
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	38.76 %
% of genes near scaffold ends (potentially truncated)	96.90 %
% of genes from short scaffolds (< 2000 bps)	90.70 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.450 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.233 % of family members)
Environment Ontology (ENVO)	Unclassified (28.682 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.264 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.94% β-sheet: 5.88% Coil/Unstructured: 66.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF02096	60KD_IMP	61.24
PF14849	YidC_periplas	34.11
PF00825	Ribonuclease_P	1.55
PF13614	AAA_31	0.78
PF13426	PAS_9	0.78
PF00266	Aminotran_5	0.78
PF00069	Pkinase	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0706	Membrane protein insertase Oxa1/YidC/SpoIIIJ	Cell wall/membrane/envelope biogenesis [M]	61.24
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.10
COG0594	RNase P protein component	Translation, ribosomal structure and biogenesis [J]	1.55

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.45 %
Unclassified	root	N/A	1.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.45 %
Unclassified	root	N/A	1.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.45 %
Unclassified	root	N/A	1.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	89.92 %
Unclassified	root	N/A	1.55 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	58.14 %
Unclassified	root	N/A	1.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	58.14 %
Unclassified	root	N/A	1.55 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZRSKLJ02H851U	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300001137\|JGI12637J13337_1007636	All Organisms → cellular organisms → Bacteria → Acidobacteria	907	Open in IMG/M
3300001661\|JGI12053J15887_10283415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300001661\|JGI12053J15887_10574975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300001661\|JGI12053J15887_10594233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300002560\|JGI25383J37093_10048314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1381	Open in IMG/M
3300002908\|JGI25382J43887_10097212	All Organisms → cellular organisms → Bacteria → Acidobacteria	1561	Open in IMG/M
3300002914\|JGI25617J43924_10065689	All Organisms → cellular organisms → Bacteria → Acidobacteria	1325	Open in IMG/M
3300004080\|Ga0062385_10133076	All Organisms → cellular organisms → Bacteria → Acidobacteria	1259	Open in IMG/M
3300004080\|Ga0062385_10871771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300004080\|Ga0062385_11193314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300005175\|Ga0066673_10068825	All Organisms → cellular organisms → Bacteria → Acidobacteria	1833	Open in IMG/M
3300005175\|Ga0066673_10241016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1044	Open in IMG/M
3300005332\|Ga0066388_108331681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300005467\|Ga0070706_100604590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1019	Open in IMG/M
3300005537\|Ga0070730_10771991	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300005541\|Ga0070733_10754116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300005552\|Ga0066701_10108641	All Organisms → cellular organisms → Bacteria → Acidobacteria	1629	Open in IMG/M
3300005554\|Ga0066661_10946270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300005555\|Ga0066692_10489474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300005602\|Ga0070762_10301578	All Organisms → cellular organisms → Bacteria → Acidobacteria	1009	Open in IMG/M
3300005712\|Ga0070764_10947657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300006086\|Ga0075019_10380318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300006102\|Ga0075015_100595200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300006102\|Ga0075015_100879940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300006163\|Ga0070715_10789440	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300006354\|Ga0075021_11097775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300006806\|Ga0079220_11136229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300007265\|Ga0099794_10262705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	891	Open in IMG/M
3300009038\|Ga0099829_11479155	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300009088\|Ga0099830_10107697	All Organisms → cellular organisms → Bacteria → Acidobacteria	2091	Open in IMG/M
3300009088\|Ga0099830_10632411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300009088\|Ga0099830_11527342	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300009088\|Ga0099830_11666298	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300009089\|Ga0099828_10026534	All Organisms → cellular organisms → Bacteria	4610	Open in IMG/M
3300009089\|Ga0099828_11180167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300009090\|Ga0099827_10277858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1413	Open in IMG/M
3300009090\|Ga0099827_11124415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300009137\|Ga0066709_100407267	All Organisms → cellular organisms → Bacteria → Acidobacteria	1888	Open in IMG/M
3300009137\|Ga0066709_101552761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300010043\|Ga0126380_11785109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300010301\|Ga0134070_10373453	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300010335\|Ga0134063_10377393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300010337\|Ga0134062_10133273	All Organisms → cellular organisms → Bacteria → Acidobacteria	1092	Open in IMG/M
3300010341\|Ga0074045_10614900	Not Available	693	Open in IMG/M
3300010343\|Ga0074044_10365687	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300010360\|Ga0126372_10814706	All Organisms → cellular organisms → Bacteria → Acidobacteria	926	Open in IMG/M
3300010361\|Ga0126378_10977364	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300010366\|Ga0126379_10275916	All Organisms → cellular organisms → Bacteria → Acidobacteria	1672	Open in IMG/M
3300011120\|Ga0150983_11108407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872	Open in IMG/M
3300011120\|Ga0150983_16542040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300011270\|Ga0137391_11474028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300011270\|Ga0137391_11487759	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300011271\|Ga0137393_10712579	All Organisms → cellular organisms → Bacteria → Acidobacteria	859	Open in IMG/M
3300012189\|Ga0137388_10186922	All Organisms → cellular organisms → Bacteria → Acidobacteria	1860	Open in IMG/M
3300012203\|Ga0137399_10184801	All Organisms → cellular organisms → Bacteria → Acidobacteria	1685	Open in IMG/M
3300012203\|Ga0137399_10375221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1184	Open in IMG/M
3300012203\|Ga0137399_10838034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300012205\|Ga0137362_10462142	All Organisms → cellular organisms → Bacteria → Acidobacteria	1099	Open in IMG/M
3300012206\|Ga0137380_11150779	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300012285\|Ga0137370_10500800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300012362\|Ga0137361_11569295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300012685\|Ga0137397_10625498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300012929\|Ga0137404_10075227	All Organisms → cellular organisms → Bacteria	2663	Open in IMG/M
3300012944\|Ga0137410_10293294	All Organisms → cellular organisms → Bacteria → Acidobacteria	1286	Open in IMG/M
3300012977\|Ga0134087_10391056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300012984\|Ga0164309_10320546	All Organisms → cellular organisms → Bacteria → Acidobacteria	1125	Open in IMG/M
3300014157\|Ga0134078_10200264	All Organisms → cellular organisms → Bacteria → Acidobacteria	814	Open in IMG/M
3300015051\|Ga0137414_1088374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1225	Open in IMG/M
3300015052\|Ga0137411_1139510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1129	Open in IMG/M
3300015052\|Ga0137411_1278307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1367	Open in IMG/M
3300015241\|Ga0137418_10003719	All Organisms → cellular organisms → Bacteria	14037	Open in IMG/M
3300017659\|Ga0134083_10110526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1090	Open in IMG/M
3300018006\|Ga0187804_10330831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300020022\|Ga0193733_1095834	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300020170\|Ga0179594_10083265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1130	Open in IMG/M
3300020579\|Ga0210407_11207519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300020581\|Ga0210399_10078204	All Organisms → cellular organisms → Bacteria → Acidobacteria	2684	Open in IMG/M
3300020581\|Ga0210399_10528644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	979	Open in IMG/M
3300020581\|Ga0210399_10810805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300020582\|Ga0210395_10835169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300020583\|Ga0210401_11031354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300021405\|Ga0210387_11309076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300021420\|Ga0210394_10147972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2040	Open in IMG/M
3300021477\|Ga0210398_10692962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300021559\|Ga0210409_10667562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910	Open in IMG/M
3300024179\|Ga0247695_1016748	All Organisms → cellular organisms → Bacteria → Acidobacteria	1027	Open in IMG/M
3300024284\|Ga0247671_1032194	All Organisms → cellular organisms → Bacteria → Acidobacteria	799	Open in IMG/M
3300025905\|Ga0207685_10583567	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300025922\|Ga0207646_10739970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	878	Open in IMG/M
3300026305\|Ga0209688_1027502	All Organisms → cellular organisms → Bacteria → Acidobacteria	1101	Open in IMG/M
3300026318\|Ga0209471_1263426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300026332\|Ga0209803_1128477	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1005	Open in IMG/M
3300026334\|Ga0209377_1048929	All Organisms → cellular organisms → Bacteria → Acidobacteria	1901	Open in IMG/M
3300026334\|Ga0209377_1106017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1157	Open in IMG/M
3300026497\|Ga0257164_1016824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1003	Open in IMG/M
3300026523\|Ga0209808_1072732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1499	Open in IMG/M
3300026529\|Ga0209806_1192982	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300026536\|Ga0209058_1279468	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300026538\|Ga0209056_10595912	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300026557\|Ga0179587_10031834	All Organisms → cellular organisms → Bacteria	2935	Open in IMG/M
3300027173\|Ga0208097_1011068	All Organisms → cellular organisms → Bacteria → Acidobacteria	983	Open in IMG/M
3300027381\|Ga0208983_1105844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300027655\|Ga0209388_1079886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	942	Open in IMG/M
3300027655\|Ga0209388_1121474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300027671\|Ga0209588_1121016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	838	Open in IMG/M
3300027725\|Ga0209178_1001158	All Organisms → cellular organisms → Bacteria	8251	Open in IMG/M
3300027767\|Ga0209655_10053825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1341	Open in IMG/M
3300027783\|Ga0209448_10147222	All Organisms → cellular organisms → Bacteria → Acidobacteria	787	Open in IMG/M
3300027846\|Ga0209180_10445509	All Organisms → cellular organisms → Bacteria → Acidobacteria	730	Open in IMG/M
3300027846\|Ga0209180_10515501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300027854\|Ga0209517_10348128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300027862\|Ga0209701_10009294	All Organisms → cellular organisms → Bacteria	6405	Open in IMG/M
3300027862\|Ga0209701_10534404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300027875\|Ga0209283_10267953	All Organisms → cellular organisms → Bacteria → Acidobacteria	1131	Open in IMG/M
3300027884\|Ga0209275_10013875	All Organisms → cellular organisms → Bacteria	3501	Open in IMG/M
3300027889\|Ga0209380_10806627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300027898\|Ga0209067_10485621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300027911\|Ga0209698_10084629	All Organisms → cellular organisms → Bacteria	2683	Open in IMG/M
3300028536\|Ga0137415_10346452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1289	Open in IMG/M
3300029636\|Ga0222749_10529094	Not Available	640	Open in IMG/M
3300030862\|Ga0265753_1133939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300031590\|Ga0307483_1017129	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300031720\|Ga0307469_11701201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300031753\|Ga0307477_10008070	All Organisms → cellular organisms → Bacteria	7314	Open in IMG/M
3300031820\|Ga0307473_10616349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300031823\|Ga0307478_10718986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300031962\|Ga0307479_10434396	All Organisms → cellular organisms → Bacteria → Acidobacteria	1297	Open in IMG/M
3300032955\|Ga0335076_10978218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.70%
Aquatic	Environmental → Aquatic	9.30%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.70%
Freshwater	Environmental → Aquatic → Freshwater	4.65%
Sediment	Environmental → Aquatic → Sediment	4.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.64%
Loam	Environmental → Terrestrial → Soil → Loam	14.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.33%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.10%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.20%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.10%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.10%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.33%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.55%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.78%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024284	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_08696900	2170459024	Grass Soil	MTKDLIRDGKLDREAAGEALRSFLENIVRAAGLELKVSVRVAE
JGI12637J13337_10076362	3300001137	Forest Soil	MGQDLIREGKLDRQAAAGALKQFLEEIVRVSGLELKINVRAIDPSA
JGI12053J15887_102834152	3300001661	Forest Soil	MAQELILDGKLDRQATTEALRLFLENIVRVSGLELKVNVRPVSAEG
JGI12053J15887_105749751	3300001661	Forest Soil	VIAFECPMAQELIREGKLDRQATAEALQHFLDSVVRAARLELKVSVRAVA
JGI12053J15887_105942332	3300001661	Forest Soil	MAQDLIHDGNLDRQAAAEALRHFLENMVRVSGLELTVNVRT
JGI25383J37093_100483142	3300002560	Grasslands Soil	MAQELIREGKLDRQAATEALRHFLENMVRVSGLELNVNVRAMPVEG
JGI25382J43887_100972122	3300002908	Grasslands Soil	MAQELIREGKLDRQAATEALRHFLENMVRVSGLELNVNVRAMPVE
JGI25617J43924_100656891	3300002914	Grasslands Soil	MAPELIRDGKLDRQATAEALRHFLESLVRASGLELKVSVRPVSAEGS
Ga0062385_101330761	3300004080	Bog Forest Soil	MTQELIHEGHLDRQATADALRRFLEEMVRVSGLELKVSVRAVARDGVDSEGDAE
Ga0062385_108717712	3300004080	Bog Forest Soil	MAQDLIRDGRLDRQAAADALRNFLEEIVRVSGLDLKVKVHAVETAA
Ga0062385_111933141	3300004080	Bog Forest Soil	MGQDLIRDGRLDRQAASHALRQFLEEIVRVSGLDLKVKVQTVDTPAT
Ga0066673_100688252	3300005175	Soil	MTQVLIHDGKLDRQAAADALRQFLENVVRVSKLELKVNVRPISAEGEGSGG
Ga0066673_102410162	3300005175	Soil	MAQVLIRDGKLDRQAAADALRQFLENIVRVSGLELKVNVRP
Ga0066388_1083316811	3300005332	Tropical Forest Soil	VRQGDRFMAPELIREGKLDRAATTDALRQFLEEALRASGLELK
Ga0070706_1006045901	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MAQELIRDGKLDRQATAEALQHFLESVVRAARLELKVSVRAVAPGERGTEGD
Ga0070730_107719911	3300005537	Surface Soil	MGQDLIRDGKLDRQAAAGALRKFLEEIVRVSGLDLKVKVQPVEA
Ga0070733_107541162	3300005541	Surface Soil	MAQDLIRDGHLDRNAAAETLQKFLEEMVRASGLDLKVKVQA
Ga0066701_101086412	3300005552	Soil	MPQEFIRDGKLDRQTTAEALRHFLENIVRASGLELKVSVRPVSADGAG
Ga0066661_109462702	3300005554	Soil	MPQELIRDGKLDRQATADALRNFLESIVRASGLELKV
Ga0066692_104894741	3300005555	Soil	MTQVLIHDGKLDRQAAADALRQFLENVVRVSKLELKVNVRPISAEGEG
Ga0070762_103015782	3300005602	Soil	MGQELIRDGRLDRLAAAERLKQFLEEIVRVSGLELKI
Ga0070764_109476572	3300005712	Soil	MGQELIRDGKLDRQAAGEALRQFLEEIVRVSGLDLKVKVQVVDTPSADA
Ga0075019_103803182	3300006086	Watersheds	MAQELIRDGKLDRQATAEALRQFLDSIVRASGLDL
Ga0075015_1005952001	3300006102	Watersheds	LAAFEGLMAQELIHEGKLDRQAAAEALRTFLENMVRV
Ga0075015_1008799401	3300006102	Watersheds	MAQELIHDGKLDRQAAAEAMRQFLENMVRASGLELKVNVRSLPVESPGSG
Ga0070715_107894402	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MGQELIRDGRLDRQAASEALRQFLEEIVRVSGLDLKVKVHAVESSATDASG
Ga0075021_110977752	3300006354	Watersheds	MAQELIHDGKLDRQAAAEALRVFLENMVRVSGLELKVNVRSLPLESTSSG
Ga0079220_111362292	3300006806	Agricultural Soil	MAQELIRDGKLDREAAADALRQFLENMMRVSGLELKVSMRTVPAQST
Ga0099794_102627051	3300007265	Vadose Zone Soil	MAQELIRDGKLDRQAAADALRHFLENMVRVSGLELKVNVRPVSAEGERS
Ga0099829_114791551	3300009038	Vadose Zone Soil	MAPELIRDGKLDRQATAEALRHFLESLVRASGLELKV
Ga0099830_101076971	3300009088	Vadose Zone Soil	MGQELIREGKLDRQATAEALHHFLENMVRVSGLELKVNVRSMPVE
Ga0099830_106324111	3300009088	Vadose Zone Soil	MAQELIRDGKLDRQAAAEALRHFLENMVRVSGLELKVSVR
Ga0099830_115273422	3300009088	Vadose Zone Soil	MAQELIRDGKLDRQATAEALQHFLESMVRASGLELKVNVRAVSEGGSGAE
Ga0099830_116662981	3300009088	Vadose Zone Soil	MTPELIREGKLDRQAASEALRQFLENMVRVSGLELKVSVRPV
Ga0099828_100265341	3300009089	Vadose Zone Soil	MGQELIREGKLDRQATAEALHHFLENMVRVSGLELKVNVRSMPVESAGSGS
Ga0099828_111801672	3300009089	Vadose Zone Soil	MAQELIRDGKLDRQATAEALHHFLENMVRVSGLELKVNVRSMPVESAGSGS
Ga0099827_102778582	3300009090	Vadose Zone Soil	MTQELIREGKLDRQGAAEALRHFLENMVRVSGLELKVNVLALPAESP
Ga0099827_111244151	3300009090	Vadose Zone Soil	MTQELIREGKLDRQAATEALRHFLENLVPVSGLELKVN
Ga0066709_1004072672	3300009137	Grasslands Soil	MPPELIREGKLDRLATAEALRNFLEDILRVSGLEL
Ga0066709_1015527612	3300009137	Grasslands Soil	MAQVLIHDGQLDRQAAADALRQFLEDIVRVSGLELKVNVRPIAAEG
Ga0126380_117851091	3300010043	Tropical Forest Soil	MPPELIRNGVLDRQATADALRDFLESMVRASGLELKVSVRAAPVDG
Ga0134070_103734531	3300010301	Grasslands Soil	MAPELIRDGKLDRQATAEALRHFLESLVRASGLELRVS
Ga0134063_103773932	3300010335	Grasslands Soil	MAQELIRDGKLDRQAAAEALRHFLENMVRVSALKLKVHVHPVSA
Ga0134062_101332732	3300010337	Grasslands Soil	MPPELIREGKLDRLATAEALRNFLDDILRVSGLELKVHVRAVP*
Ga0074045_106149002	3300010341	Bog Forest Soil	MAQELIRDGRLDREAAAAALRGFLEEMVRVSGLELKINVRSVATDG
Ga0074044_103656871	3300010343	Bog Forest Soil	MAQELIREGKLDRQAAAEALRLFLENIVRVSGLELKVSVRAIPA
Ga0126372_108147062	3300010360	Tropical Forest Soil	MPQELIRDGKLDRQATAEALRQFLENIVRASGLELKVSVR
Ga0126378_109773641	3300010361	Tropical Forest Soil	MPQELISDGKLDRQATAEALQQFLENIVRASGLDLKVNVRAVSGDGSGG
Ga0126379_102759161	3300010366	Tropical Forest Soil	MPPELIHDGKLDRQATAEALRHFLESMVRASGLELRVNVQAIP
Ga0150983_111084071	3300011120	Forest Soil	MGQDLIRDGKLDRQAAAEALRRFLEEIVRVSGLDLKIVVRVVE
Ga0150983_165420402	3300011120	Forest Soil	MGQDLIRDGKLDRQAAAEALRRFLEEIVRVSGLDLKIAVR
Ga0137391_114740282	3300011270	Vadose Zone Soil	MAQELIRDGKLDRQAVAETLRHFLENMVRVSGLELKV
Ga0137391_114877591	3300011270	Vadose Zone Soil	MAPELIRDGKLDRQATAEALRHFLESLVRASGLELKVSV
Ga0137393_107125791	3300011271	Vadose Zone Soil	MTQELIRDGKLDRQAAAEALRQFLESLVRTSGLELKVSVR
Ga0137388_101869221	3300012189	Vadose Zone Soil	MAQELIRDGKLDREAAAEALRHFLENMVRVSGLELK
Ga0137399_101848011	3300012203	Vadose Zone Soil	MAQELIRDGKLDRQATAEALQHFLESVVRAARLELKVSVRAVALGGTGAEG
Ga0137399_103752211	3300012203	Vadose Zone Soil	MAQELIRDGKLDRQATAEALQHFLESVVRAARLELKVSVRAV
Ga0137399_108380341	3300012203	Vadose Zone Soil	MVQELIRDGKLDRQAATDALRQFLENIVRVSGLELKVSVRAVSPEGEG
Ga0137362_104621421	3300012205	Vadose Zone Soil	MAQELIRDGKLDRQATADALRHFLESLVRVSRLDLKV
Ga0137380_111507792	3300012206	Vadose Zone Soil	MAPELIRDGKLDRQATAEALRHFLESLVRASGLEL
Ga0137370_105008002	3300012285	Vadose Zone Soil	MAKELIRDGKLDRQAAAEALRHFLENIVLVSGLELQVSVR
Ga0137361_115692952	3300012362	Vadose Zone Soil	MAQELIRDGKLDRQAAAEALRHFLENMVRASGLELKVNVRTLPAESAGSSNGA
Ga0137397_106254982	3300012685	Vadose Zone Soil	MAQELIRDGKLDRQATADALRHFLESVVRAAGLELKVSVRAIGSGGTGAEG
Ga0137404_100752274	3300012929	Vadose Zone Soil	MAQELIRDGKLDRQAAAEALRHFLENIGHVSGLEV
Ga0137410_102932942	3300012944	Vadose Zone Soil	MAQELIRDGKLDRQATADALRHFLESLVRVSRLDLKVDVR
Ga0134087_103910561	3300012977	Grasslands Soil	MAKELIRDGKLDRQAAAEALRHFLENIVLVSGLELQ
Ga0164309_103205462	3300012984	Soil	MGQDLIREGQLDRQAAAAALRNFLEDIVRVSGLDL
Ga0134078_102002641	3300014157	Grasslands Soil	MPPELIREGKLDRLATAEALRNFLDDILRVSGLEL
Ga0137414_10883742	3300015051	Vadose Zone Soil	MTPELIREGKLDRQAAAEALRQFLENMVRVSGLELKVSVRP
Ga0137411_11395101	3300015052	Vadose Zone Soil	MAQELIRDGKLDRQATAEALQHFLESVVRAARLELKVSVRA
Ga0137411_12783071	3300015052	Vadose Zone Soil	MAQELIRDGKLDRQATAEALQHFLEGVVRAARLELKVSVRAVAR
Ga0137418_100037192	3300015241	Vadose Zone Soil	MVQELIRDGKLDRQAATDALRQFLENIVRVSGLELKVSVRAVSPEGEGSXXXXX
Ga0134083_101105261	3300017659	Grasslands Soil	MAQELIREGKLDRQAATEALRHFLENMVRVSGLELN
Ga0187804_103308311	3300018006	Freshwater Sediment	MAQELIKDGKLDRQATAEALRHFLESIVRAAKLELKVNVRAISS
Ga0193733_10958341	3300020022	Soil	MAKELIRDGKLDRQAAADALRHFLENIVLVSGLELQVSVR
Ga0179594_100832651	3300020170	Vadose Zone Soil	MAQELIRDGKLDRQAAAEALRHFLENMVRVSALELKVNVH
Ga0210407_112075191	3300020579	Soil	MGQDLIREGKLDRQAAAEALRQFLEEIVRVSGLDLKVKVQAVDA
Ga0210399_100782041	3300020581	Soil	MAQDLIRDGKLDRQAAAEALRKFLEEMVRVSGLDLKVKVHAVEAA
Ga0210399_105286442	3300020581	Soil	MTQELIRDGKLDRQATADALKNFLESIVRTSGLELK
Ga0210399_108108052	3300020581	Soil	MSTELIHDGVLDRQATVEALRLFLESMVRASGLELKVSVRAVAPDAAGTQ
Ga0210395_108351691	3300020582	Soil	MAPELIREGRLDREATADALRRFLEEMVRVSGLELRIHVRSVAADGA
Ga0210401_110313541	3300020583	Soil	MGQDLIREGKLDRQAAAEALRQFLEEIVRVSGLDLKVKVQ
Ga0210387_113090762	3300021405	Soil	MAQDLIRDGKLDRQAAAEALRTFLEEIVRVAGFDLRVKV
Ga0210394_101479721	3300021420	Soil	MAQDLIRDGHLDRNAAAEALRKFLDEMVRASGLDLKVKVQAI
Ga0210398_106929622	3300021477	Soil	MSQDLIRDGKLDRLAAGETLRKFLEEIVRVSGLDLRVKVQVVEAPAADV
Ga0210409_106675621	3300021559	Soil	MTQELIRDGKLDRQAAADTLRQFLENIVRVSGLELKVSVRAVSLEGE
Ga0247695_10167482	3300024179	Soil	MGQELIRDGRLDRQAASEALRQFLEEIVRVSGLDLKVKVHAVESSATNASDEA
Ga0247671_10321941	3300024284	Soil	MGQDLIREGQLDRQAAAGALRKFLEEIVRVSGLDLKVKVQ
Ga0207685_105835672	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MGQELIRDGRLDRQAASEALRQFLEEIVRVSGLDLKVKVHAVESSATDASGE
Ga0207646_107399702	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAQELIRDGKLDRQATAEALQHFLESVVRAARLELKVSVRAVAPGLV
Ga0209688_10275021	3300026305	Soil	MSSDLIRDGKLDRQATAEALRQFLENIVGASGLEL
Ga0209471_12634261	3300026318	Soil	MAQVLIHDGKLDRQAAADALRRFLENIVHVSGLELQVNVRA
Ga0209803_11284772	3300026332	Soil	MAQELIREGKLDRQAATEALRHFLENMVRVSGLELNVNVRAM
Ga0209377_10489292	3300026334	Soil	MAPELIRDGKLDRQATAEALRHFLESLVRASGLELKVSVRPVSAEGSGTDGEAEV
Ga0209377_11060172	3300026334	Soil	MAQELIREGKLDRQAATEALRHFLENMVRVSGLELNVNVRALPVERLR
Ga0257164_10168242	3300026497	Soil	MAQELIRDGKLDRQATAEALQHFLESVVRAARLELKVSVRAA
Ga0209808_10727322	3300026523	Soil	MTQVLIHDGKLDRQAAADALRQFLENVVRVSKLELKVNVRPISAEGEGSGGGAEV
Ga0209806_11929822	3300026529	Soil	MAQELIRDGKLERQATAEALQHFLESVVRAARLELKVSV
Ga0209058_12794682	3300026536	Soil	MSSELIRDGKLDRQATAEALRQFLENIVGASGLELKVN
Ga0209056_105959121	3300026538	Soil	MPQELIRDGKLDRQATAEALRQFLESMVRGSGLELKVNVRAV
Ga0179587_100318341	3300026557	Vadose Zone Soil	MAQELIRDGKLDRQAAAEALRHFLETMVRVSALELKVKV
Ga0208097_10110681	3300027173	Forest Soil	MGQDLIREGKLDRQAAAEALRKFLEEIVRVSGLDLKVKVHVVDTPATEASGE
Ga0208983_11058441	3300027381	Forest Soil	MAQELIRDGKLDRQATAEALQHFLESVVRAARLELKVSVRAVAPGGAGTE
Ga0209388_10798862	3300027655	Vadose Zone Soil	MAQELIRDGKLDRQATAEALQHFLESVVRAARLELKVSVRAVAPGGT
Ga0209388_11214741	3300027655	Vadose Zone Soil	MAQELIRDGKLDRQAAADALRHFLENMVRVSGLELKVSVRPVSAEG
Ga0209588_11210161	3300027671	Vadose Zone Soil	MAQELIRDGKLDRQATADALRHFLESVVRVAGLDLKVSVRAAASGGTGAEGD
Ga0209178_10011581	3300027725	Agricultural Soil	MPQELIRDGKLDRQATADALRTFLENMVRAAGFELKVNVRAVPEESSDGSAAE
Ga0209655_100538252	3300027767	Bog Forest Soil	MSSEIIRDGKLDRAATAEALRQFLDAVVRASGLELRVDVRA
Ga0209448_101472222	3300027783	Bog Forest Soil	MGQDFIRDGKLDRQAAGEALRKFLEEIVRVSGLDLKVKVHVV
Ga0209180_104455092	3300027846	Vadose Zone Soil	MTQELIRDGKLDRQAAAEALRQFLESLVRTSGLELKVSVRAVS
Ga0209180_105155011	3300027846	Vadose Zone Soil	MAQELIRDGKLDRQAAAEALRHFLENMVRVSALELKVN
Ga0209517_103481281	3300027854	Peatlands Soil	MAQELIRDGKLDRQAAAEALRQFLEKMVQVSGLVLKVHVRAVPAESAS
Ga0209701_100092941	3300027862	Vadose Zone Soil	MGQELIREGKLDRQATAEALHHFLENMVRVSGLELKVNVRSMP
Ga0209701_105344042	3300027862	Vadose Zone Soil	MAQELIRDGKLDRQATAEALHHFLENMVRVSGLELKVNVRSMP
Ga0209283_102679532	3300027875	Vadose Zone Soil	MALELIRDGKLDRQAAAEALRQFLESLVRTSGLELKVSARAVSA
Ga0209275_100138754	3300027884	Soil	MGQDLIRDGKLDRPAAAEALRKFLEEIVRVSGLDLKVEVQPSDAPATDA
Ga0209380_108066272	3300027889	Soil	MGQDLIRDGKLDRQAAAEALRRFLEEIVRASGLDLKIAVRAV
Ga0209067_104856212	3300027898	Watersheds	MAQELIRDGKLDRQATAEALRQFLDSIVRASGLDLKVNVRP
Ga0209698_100846291	3300027911	Watersheds	MAQELIRDGKLDRQATAEALRQFLDSIVRASGLDLKVNVRPVSAS
Ga0137415_103464522	3300028536	Vadose Zone Soil	MAPELIHDGKLDRQAAAEALRQFLENTVRVSGLELK
Ga0222749_105290942	3300029636	Soil	MAQELIRDGRLDREATADALRRFLEEMVRVSGLELKI
Ga0265753_11339391	3300030862	Soil	MGPDLIRDGKLDRQAAGETLRKFLEEIVRVSGLDLKVKVQVVDTPAA
Ga0307483_10171292	3300031590	Hardwood Forest Soil	MAPELIKDGKLDRQATAEALRHFLESTVRAAKLELRVNVRAISSD
Ga0307469_117012012	3300031720	Hardwood Forest Soil	MAQELIRDGKLDRQATADALRHFLESLVRVSRLDLKVDVRTLPLGGAGT
Ga0307477_1000807010	3300031753	Hardwood Forest Soil	MALELIHEGKLDRQTAADALRQFLENMVLVTGLELKVQVRALPAESAGSGSEAEVL
Ga0307473_106163492	3300031820	Hardwood Forest Soil	MAQELIRDGKLDRQATADALRHFLESLVRVSRLDLKVD
Ga0307478_107189862	3300031823	Hardwood Forest Soil	MALDLIRDGKLDRQAAADALRKFLEEIVRVSGLDVKVKVQA
Ga0307479_104343962	3300031962	Hardwood Forest Soil	MAQELIRDGKLDRQAAADALRQFLENIVHASGLELKVS
Ga0335076_109782181	3300032955	Soil	MAQDLIRDGKLDRQAAADALRTFVEEMVRVSGLDLKVKVQSVEASSA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064128

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences