Metagenome / Metatranscriptome Family F064123

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064123
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	71 residues
Representative Sequence	MARKTIFVSDLSGKEIDNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSHNGGESKR
Number of Associated Samples	110
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.95 %
% of genes near scaffold ends (potentially truncated)	32.56 %
% of genes from short scaffolds (< 2000 bps)	83.72 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (63.566 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (21.705 % of family members)
Environment Ontology (ENVO)	Unclassified (34.109 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.992 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.65% β-sheet: 12.62% Coil/Unstructured: 75.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00571	CBS	1.55
PF13683	rve_3	1.55
PF00246	Peptidase_M14	1.55
PF07366	SnoaL	1.55
PF00196	GerE	1.55
PF01408	GFO_IDH_MocA	0.78
PF07837	FTCD_N	0.78
PF00248	Aldo_ket_red	0.78
PF01053	Cys_Met_Meta_PP	0.78
PF06950	DUF1293	0.78
PF07676	PD40	0.78
PF02518	HATPase_c	0.78
PF02810	SEC-C	0.78
PF07883	Cupin_2	0.78
PF01047	MarR	0.78
PF02577	BFN_dom	0.78
PF10604	Polyketide_cyc2	0.78
PF01545	Cation_efflux	0.78
PF00300	His_Phos_1	0.78
PF11239	DUF3040	0.78
PF10571	UPF0547	0.78
PF00589	Phage_integrase	0.78
PF08940	DUF1918	0.78
PF07992	Pyr_redox_2	0.78
PF10057	MpsC	0.78
PF00578	AhpC-TSA	0.78
PF05977	MFS_3	0.78
PF00850	Hist_deacetyl	0.78
PF10722	YbjN	0.78
PF14016	DUF4232	0.78
PF00149	Metallophos	0.78
PF10544	T5orf172	0.78
PF00072	Response_reg	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.55
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	0.78
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.78
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.78
COG3643	Glutamate formiminotransferase	Amino acid transport and metabolism [E]	0.78
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.78
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.78
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.78
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.78
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.78
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.78
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.78
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.78
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.78
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.78
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.78
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.57 %
All Organisms	root	All Organisms	36.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.57 %
cellular organisms	root	All Organisms → cellular organisms	35.66 %
Viruses	superkingdom	All Organisms → Viruses	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.66 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.57 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	25.58 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.55 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.57 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23.26 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.55 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.78 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13.95 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	1.55 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.78 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.78 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.57 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	10.85 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	1.55 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.78 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	0.78 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.85 %
Candidatus Wolfebacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Wolfebacteria	1.55 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	0.78 %
unclassified Acidimicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales	0.78 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.85 %
Candidatus Wolfebacteria bacterium RIFCSPHIGHO2_01_FULL_48_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Wolfebacteria → Candidatus Wolfebacteria bacterium RIFCSPHIGHO2_01_FULL_48_22	1.55 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	0.78 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.78 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.85 %
Candidatus Wolfebacteria bacterium RIFCSPHIGHO2_01_FULL_48_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Wolfebacteria → Candidatus Wolfebacteria bacterium RIFCSPHIGHO2_01_FULL_48_22	1.55 %
Deinococcus peraridilitoris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus peraridilitoris	0.78 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	0.78 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.57 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.85 %
Candidatus Wolfebacteria bacterium RIFCSPHIGHO2_01_FULL_48_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Wolfebacteria → Candidatus Wolfebacteria bacterium RIFCSPHIGHO2_01_FULL_48_22	1.55 %
Deinococcus peraridilitoris DSM 19664	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus peraridilitoris → Deinococcus peraridilitoris DSM 19664	0.78 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	0.78 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	0.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559006\|FI_contig31398	Not Available	502	Open in IMG/M
2170459003\|FZ032L002JEBVQ	Not Available	528	Open in IMG/M
2170459005\|F1BAP7Q02FTWD8	Not Available	526	Open in IMG/M
2170459009\|GA8DASG02IN8UW	Not Available	512	Open in IMG/M
2170459022\|GZEQPF102H87DD	Not Available	507	Open in IMG/M
2228664022\|INPgaii200_c0849146	Not Available	565	Open in IMG/M
3300000956\|JGI10216J12902_100735269	Not Available	831	Open in IMG/M
3300000956\|JGI10216J12902_109785604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3309	Open in IMG/M
3300001532\|A20PFW1_1067334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3597	Open in IMG/M
3300001532\|A20PFW1_1169613	Not Available	1902	Open in IMG/M
3300001534\|A15PFW1_10063014	Not Available	625	Open in IMG/M
3300001535\|A3PFW1_10009237	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Wolfebacteria → Candidatus Wolfebacteria bacterium RIFCSPHIGHO2_01_FULL_48_22	5362	Open in IMG/M
3300001535\|A3PFW1_10156079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2610	Open in IMG/M
3300001535\|A3PFW1_10253922	Not Available	596	Open in IMG/M
3300001535\|A3PFW1_10274026	Not Available	617	Open in IMG/M
3300001538\|A10PFW1_10206937	Not Available	880	Open in IMG/M
3300002568\|C688J35102_120555740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1176	Open in IMG/M
3300004081\|Ga0063454_101114464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	646	Open in IMG/M
3300004114\|Ga0062593_100400213	Not Available	1227	Open in IMG/M
3300004479\|Ga0062595_101451731	Not Available	629	Open in IMG/M
3300005167\|Ga0066672_10053489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2325	Open in IMG/M
3300005167\|Ga0066672_10265871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1107	Open in IMG/M
3300005176\|Ga0066679_10676631	Not Available	670	Open in IMG/M
3300005178\|Ga0066688_10174496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1356	Open in IMG/M
3300005178\|Ga0066688_11000049	Not Available	510	Open in IMG/M
3300005179\|Ga0066684_10271486	All Organisms → Viruses → Predicted Viral	1119	Open in IMG/M
3300005187\|Ga0066675_11047427	Not Available	611	Open in IMG/M
3300005329\|Ga0070683_100439877	Not Available	1244	Open in IMG/M
3300005332\|Ga0066388_104395717	Not Available	718	Open in IMG/M
3300005434\|Ga0070709_10006820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6235	Open in IMG/M
3300005440\|Ga0070705_101042807	Not Available	666	Open in IMG/M
3300005454\|Ga0066687_10554194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300005471\|Ga0070698_100079346	All Organisms → cellular organisms → Bacteria	3279	Open in IMG/M
3300005471\|Ga0070698_100938857	Not Available	811	Open in IMG/M
3300005529\|Ga0070741_10013210	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	14667	Open in IMG/M
3300005529\|Ga0070741_11149560	Not Available	657	Open in IMG/M
3300005535\|Ga0070684_101309285	Not Available	682	Open in IMG/M
3300005538\|Ga0070731_10000153	All Organisms → cellular organisms → Bacteria	126940	Open in IMG/M
3300005555\|Ga0066692_11009932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300005557\|Ga0066704_10687034	Not Available	646	Open in IMG/M
3300005560\|Ga0066670_10208224	Not Available	1176	Open in IMG/M
3300005560\|Ga0066670_10276431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1020	Open in IMG/M
3300005561\|Ga0066699_10340005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1072	Open in IMG/M
3300005568\|Ga0066703_10650048	Not Available	610	Open in IMG/M
3300005598\|Ga0066706_10432802	Not Available	1048	Open in IMG/M
3300005841\|Ga0068863_100942551	Not Available	865	Open in IMG/M
3300006032\|Ga0066696_10168770	Not Available	1377	Open in IMG/M
3300006034\|Ga0066656_10987765	Not Available	540	Open in IMG/M
3300006046\|Ga0066652_100217856	All Organisms → cellular organisms → Bacteria	1652	Open in IMG/M
3300006046\|Ga0066652_100571635	Not Available	1062	Open in IMG/M
3300006102\|Ga0075015_100563258	Not Available	663	Open in IMG/M
3300006163\|Ga0070715_10932890	Not Available	536	Open in IMG/M
3300006794\|Ga0066658_10144955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	1195	Open in IMG/M
3300006794\|Ga0066658_10403271	Not Available	742	Open in IMG/M
3300006796\|Ga0066665_10291678	Not Available	1308	Open in IMG/M
3300006950\|Ga0075524_10080793	Not Available	1375	Open in IMG/M
3300009012\|Ga0066710_102063718	Not Available	841	Open in IMG/M
3300009137\|Ga0066709_101858960	Not Available	841	Open in IMG/M
3300009162\|Ga0075423_11656935	Not Available	688	Open in IMG/M
3300010322\|Ga0134084_10447102	Not Available	514	Open in IMG/M
3300010335\|Ga0134063_10689454	Not Available	527	Open in IMG/M
3300011987\|Ga0120164_1031317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	814	Open in IMG/M
3300011994\|Ga0120157_1045496	Not Available	959	Open in IMG/M
3300012199\|Ga0137383_10316960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1142	Open in IMG/M
3300012200\|Ga0137382_10113459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1802	Open in IMG/M
3300012206\|Ga0137380_10233107	Not Available	1663	Open in IMG/M
3300012207\|Ga0137381_11034289	Not Available	708	Open in IMG/M
3300012208\|Ga0137376_10106176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2384	Open in IMG/M
3300012209\|Ga0137379_10243582	All Organisms → cellular organisms → Bacteria	1711	Open in IMG/M
3300012210\|Ga0137378_11209614	Not Available	671	Open in IMG/M
3300012285\|Ga0137370_10062423	Not Available	2025	Open in IMG/M
3300012354\|Ga0137366_10049995	All Organisms → cellular organisms → Bacteria	3210	Open in IMG/M
3300012356\|Ga0137371_10670276	Not Available	794	Open in IMG/M
3300012362\|Ga0137361_11501589	Not Available	596	Open in IMG/M
3300012680\|Ga0136612_10688704	Not Available	517	Open in IMG/M
3300012683\|Ga0137398_11043080	Not Available	565	Open in IMG/M
3300012915\|Ga0157302_10059891	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1102	Open in IMG/M
3300012957\|Ga0164303_10905135	Not Available	618	Open in IMG/M
3300012977\|Ga0134087_10188370	Not Available	918	Open in IMG/M
3300012989\|Ga0164305_11293576	Not Available	637	Open in IMG/M
3300013105\|Ga0157369_12659398	Not Available	505	Open in IMG/M
3300013294\|Ga0120150_1039905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	919	Open in IMG/M
3300013307\|Ga0157372_11341962	Not Available	825	Open in IMG/M
3300013763\|Ga0120179_1020139	All Organisms → cellular organisms → Bacteria	1649	Open in IMG/M
3300013764\|Ga0120111_1012800	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Wolfebacteria → Candidatus Wolfebacteria bacterium RIFCSPHIGHO2_01_FULL_48_22	2516	Open in IMG/M
3300013765\|Ga0120172_1103816	Not Available	689	Open in IMG/M
3300014056\|Ga0120125_1158835	Not Available	553	Open in IMG/M
3300014150\|Ga0134081_10323042	Not Available	560	Open in IMG/M
3300015356\|Ga0134073_10079043	Not Available	936	Open in IMG/M
3300015371\|Ga0132258_11945653	Not Available	1480	Open in IMG/M
3300018433\|Ga0066667_11446939	Not Available	605	Open in IMG/M
3300018468\|Ga0066662_10001384	All Organisms → cellular organisms → Bacteria	11100	Open in IMG/M
3300018468\|Ga0066662_10540037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1074	Open in IMG/M
3300018468\|Ga0066662_12382268	Not Available	557	Open in IMG/M
3300018482\|Ga0066669_10047400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2688	Open in IMG/M
3300019888\|Ga0193751_1032473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2426	Open in IMG/M
3300019888\|Ga0193751_1069326	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300020070\|Ga0206356_10412045	Not Available	729	Open in IMG/M
3300020076\|Ga0206355_1115213	Not Available	584	Open in IMG/M
3300020080\|Ga0206350_11157888	Not Available	851	Open in IMG/M
3300021363\|Ga0193699_10041941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1747	Open in IMG/M
3300021363\|Ga0193699_10206270	Not Available	816	Open in IMG/M
3300024182\|Ga0247669_1024795	Not Available	1023	Open in IMG/M
3300024232\|Ga0247664_1007083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus peraridilitoris → Deinococcus peraridilitoris DSM 19664	2560	Open in IMG/M
3300024232\|Ga0247664_1017936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1645	Open in IMG/M
3300024254\|Ga0247661_1067675	Not Available	663	Open in IMG/M
3300024331\|Ga0247668_1040038	Not Available	957	Open in IMG/M
3300025725\|Ga0209638_1017334	Not Available	3519	Open in IMG/M
3300025725\|Ga0209638_1081126	Not Available	1200	Open in IMG/M
3300025891\|Ga0209585_10048019	Not Available	1573	Open in IMG/M
3300025898\|Ga0207692_10243161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1075	Open in IMG/M
3300025913\|Ga0207695_10697806	Not Available	895	Open in IMG/M
3300025922\|Ga0207646_11354189	Not Available	620	Open in IMG/M
3300025927\|Ga0207687_10917650	Not Available	750	Open in IMG/M
3300026317\|Ga0209154_1129484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1063	Open in IMG/M
3300026331\|Ga0209267_1226007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	690	Open in IMG/M
3300026475\|Ga0257147_1006199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1495	Open in IMG/M
3300026542\|Ga0209805_1253092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	691	Open in IMG/M
3300027869\|Ga0209579_10000004	All Organisms → cellular organisms → Bacteria	890648	Open in IMG/M
3300027991\|Ga0247683_1024009	Not Available	552	Open in IMG/M
3300028072\|Ga0247675_1065721	Not Available	547	Open in IMG/M
3300028138\|Ga0247684_1051422	Not Available	666	Open in IMG/M
3300028800\|Ga0265338_10009137	All Organisms → cellular organisms → Bacteria	11899	Open in IMG/M
3300028802\|Ga0307503_10001449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5316	Open in IMG/M
3300028881\|Ga0307277_10317856	Not Available	692	Open in IMG/M
3300030006\|Ga0299907_10949256	Not Available	636	Open in IMG/M
3300031199\|Ga0307495_10131115	Not Available	629	Open in IMG/M
3300031938\|Ga0308175_100411020	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1416	Open in IMG/M
3300031938\|Ga0308175_100602206	Not Available	1183	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.80%
Host-Associated	Host-Associated	6.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.25%
Plants	Host-Associated → Plants	6.20%
Aquatic	Environmental → Aquatic	1.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.55%
Freshwater	Environmental → Aquatic → Freshwater	0.78%
Sediment	Environmental → Aquatic → Sediment	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.95%
Loam	Environmental → Terrestrial → Soil → Loam	9.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.88%
Ice	Environmental → Aquatic → Freshwater → Ice	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	30.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	14.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.55%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.71%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	11.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.43%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.10%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.10%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	3.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.55%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.55%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2170459022	Grass soil microbial communities from Rothamsted Park, UK - FA2 (control condition)	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001532	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-PF 12A)- 1 week illumina	Environmental	Open in IMG/M
3300001534	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-PF-7A)- 1 week illumina	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300011987	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0M	Environmental	Open in IMG/M
3300011994	Permafrost microbial communities from Nunavut, Canada - A7_65cm_12M	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027991	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK24	Environmental	Open in IMG/M
3300028072	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK16	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FI_00542590	2166559006	Grass Soil	LARKTIFVSDLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVEAGRQQARRGRRPKSHNGGESSARFQGRSDAAPGLYAT
E4A_10795650	2170459003	Grass Soil	LARKTIFVSDLSGKEIGNDRDAVTITVKYGDARRGVIVVDAHPDDSEVKRLV
E41_08955410	2170459005	Grass Soil	MARKTIFVSDLSGKEIGNDRDAVTITVKYGDARKGLIVVDAHPDDSEVKRLVKAGRHQARRGRRPKSHNGGESRR
F47_10848020	2170459009	Grass Soil	MARKTIFVSDLSGEEIANERDAVRITVTFGDARKGVFVIDAHPDDPEVALLTSKGKQQARRGRKPKKDS
FA2_08490340	2170459022	Grass Soil	KEIGNDRDAVTITVRYGDARKGVIVVDAHPDDSEVKRLVEAGRQQARRGRRPKSHNGGESRR
INPgaii200_08491462	2228664022	Soil	MARKTIFVSDLSGKXIGNDRDAVTITVRYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSQNGGESKR
JGI10216J12902_1007352692	3300000956	Soil	VARKTILVSDLSNTELDERDAVQITVTFNDARRGQYVVDAHPDDAEVKTLIQAGTKQARRGRRPTSGTGA*
JGI10216J12902_1097856046	3300000956	Soil	MARKTIFVSDLSGKVIGNDRDAVTITVRYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSQNGGESKR*
A20PFW1_10673344	3300001532	Permafrost	MARKTIFVSDLSGREIPNDRDAVKITVSFADARKGMFVIDAHPEDAEVKALTSKGKQQARRGRKPKEA*
A20PFW1_11696135	3300001532	Permafrost	VARKTIFVSDLSGREIPNDRDAVKITVSFADARKGLFVIDAHLEDAEVKALTSKGKQQARRGRKPKAS*
A15PFW1_100630142	3300001534	Permafrost	VARKTIFVSDLSGREIPNDRDAVKITVSFADARKGLFVIDAHLEDAEVKALTSKGNQ
A3PFW1_100092374	3300001535	Permafrost	LARKTIFVSDLSGKEIHNDRDAVTITVRYGDARKGVVVVDAHPDDSEVKRLVQAGRQQARRGRRPKSQNGGESKR*
A3PFW1_101560793	3300001535	Permafrost	MAKRTIFVSDLSGKEIDAKDAVRITVTYTDARRGQVVVDAHPDDDEVKRLVSKGTKQARRGRRPKSAA*
A3PFW1_102539222	3300001535	Permafrost	MARKTVFVSDLSGKEIANERDAVTITVKFGDARRGQYAVDAHPDDAEVKRLISAGKQQARRGRKPKAASS*
A3PFW1_102740261	3300001535	Permafrost	VARKTIFVSDLSGKEISNDRDVVTITVKYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSHNGGESRR*
A10PFW1_102069372	3300001538	Permafrost	LARKTVFVSDLSGKEIANDRDAVKITVTFGDARKGMFVVDAHPDDPEVKTLTDKGVQQARRGRKPKAS*
C688J35102_1205557402	3300002568	Soil	VARKTIFVSDLSGKEIGNERDAVTITVRYGDARKGVIVVDAHPDDSEVKRLVQVGRQQARRGRRPKSHNGGESKR*
Ga0063454_1011144641	3300004081	Soil	PSRQKRKDEMAKKTITVSDLSNKEIADPKEAVTITVKYGDARRGQFVIDAHASDPDVKKLVDAGRPQARRGRRPKSATQ*
Ga0062593_1004002132	3300004114	Soil	MARKTIFVSDLSGKEIGNDRDAVTITVRYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSQNGGESKR*
Ga0062595_1014517311	3300004479	Soil	VSDLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVEAGRQQARRGRRPKSHNGGESRR*
Ga0066672_100534893	3300005167	Soil	LARKTIFVSDLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPDDNEVKRLVEAGRQQARRGRRPKSHNGGESRR*
Ga0066672_102658712	3300005167	Soil	MARKTIFVSDLSGKEIPNERDAVQITVRFGDARRGVFIVDAHPDDPEVNALTDKGRQQARRGRRPKAASAD*
Ga0066679_106766311	3300005176	Soil	KEISEGDAVKITVSFADARKGQIVVDASPDDSEVQTLLAKGTKQARRGRRPKASDQARSLESGR*
Ga0066688_101744961	3300005178	Soil	MAKRTIFVSDLSGKEISNERDAVTITIKFGDARRGLYVVDAHPDDSEVKKLISAGRQQARRGRRPKAASSS*
Ga0066688_110000491	3300005178	Soil	VARKTIFVSDLSGKEIDNDRDAVTITVKYGDARKGVIVVDAHPDDGEVKRLVEVGRQQARRGRSPKSHNGGESRR*
Ga0066684_102714862	3300005179	Soil	VSDLSGKEIDNNRDAVTITVKYSDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSENGGESRR*
Ga0066675_110474271	3300005187	Soil	LARKTIFVSDLSGKEIDNNRDAVTITVKYSDARKGVIVVDAHPNDSEVKRL
Ga0070683_1004398771	3300005329	Corn Rhizosphere	MARKTIFVSDLSGKEIGDDRDAVTITVKYGDARKGVIVVDAHPDDAEVKRLVQAGRQQARRGRRPKSHNGGESRR*
Ga0066388_1043957172	3300005332	Tropical Forest Soil	MAKKTVVVSDLSGKELDEKNSVRITVTFSDARRGMYSVDADPNDSIVKQLIEAGTPQKRRGRRPKASA*
Ga0070709_100068204	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MARKTIFVSDLSGKEIGDDRDAVTITVKYGDARKGVIVVDAHPEDVEVKRLVQAGRQQARRGRRPKSHNGGESRR*
Ga0070705_1010428071	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MARKTIFVSDLSGKEIGNDRDAVTITVRYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGR
Ga0066687_105541941	3300005454	Soil	DLSGKEIGNDRDAVTITVKYSDARKGVIVVDAHPDDSEVKRLVEAGRQQARRGRRPKSHNGGESRR*
Ga0070698_1000793463	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	LARKTVFVSDLSGKEIDEKDAVKITVSYADARRGVYVLDAHPDDGAVKELMAKGKKQARRGRKPKAA*
Ga0070698_1009388571	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MARKTVFVSDLSGREIANDRDAVKITVTFGDARKGMFVIDAHPEDSEVKVLTSKGTQQARRGRKPKAAQSS*
Ga0070741_1001321015	3300005529	Surface Soil	MARKTVFVSDLSGREIPNERDAVTVTVKFGDARRKAYIVDAHPDDAEIKTLMEKGREQTRRGRKPKVQAS*
Ga0070741_111495601	3300005529	Surface Soil	MAKKTVFVSDLSGKEISNDRDAVKITVTFGDARRGMYVVDGHPDDSIVKELISKGTQQARRGRRPKAAA*
Ga0070684_1013092852	3300005535	Corn Rhizosphere	MARKTIFVSDLSGKEIGDDRDAVTITVKYGDARKGVIVVDAHPDDAEVKRL
Ga0070731_1000015324	3300005538	Surface Soil	MARKTVFVSDLSGKEISNERDAVTITVKFGDARRGQYSVDAHPDDAEVKRLISAGTQQARRGRRPKAASS*
Ga0066692_110099322	3300005555	Soil	VARKTIFVSDLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVEAGRQQARRGRRPKSHNGGESRR*
Ga0066704_106870342	3300005557	Soil	MARKTIFVSDLSGKEISEGDAVKITVSFADARKGQIVVDASPDDSEVQTLLAKGTKQARRGRRPKASDQARSLESGR*
Ga0066670_102082243	3300005560	Soil	LARKTIFVSDLSGKEIDNNRDAVTITVKYSDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSENGGESRR*
Ga0066670_102764311	3300005560	Soil	LARKTIFVSDLSGKEIGNERDAVTITVRYGDARKGVIVVDAHPDDSEVKRLVQVGRQQARRGRRPKSHNGGESKR*
Ga0066699_103400051	3300005561	Soil	ARKTIFVSDLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPDDNEVKRLVEAGRQQARRGRRPKSHNGGESRR*
Ga0066703_106500482	3300005568	Soil	MARKTVFVSDLSGKEIDNDRDAVTITVRYGDARKGVIVVDAHPDDSEVKLLVQAGRQQARRGRRPKSQNGGESKR*
Ga0066706_104328021	3300005598	Soil	ERELARKTIFVSDLSGKEIDNNRDAVTITVKYSDARKGVIVVDAHPNDSEVKRLVQAGRQQARRGRRPKSENGGESRR*
Ga0068863_1009425512	3300005841	Switchgrass Rhizosphere	LEHRFKETTMARKTIFVSDLSGKEIGNDRDAVTITVRYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSQNGGESKR*
Ga0066696_101687702	3300006032	Soil	MARKTIFVSDLSGKEIDSERDAVTITVKYGDARKGVIVVDAHPNDSEVERLVQVGRQQARRGRRPKSQNGGEVRR*
Ga0066656_109877651	3300006034	Soil	FKETPMARKTIFVSDLSGKEIDNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSHNGGESKR*
Ga0066652_1002178561	3300006046	Soil	MARKTVFVSDLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSHNGGES
Ga0066652_1005716352	3300006046	Soil	MARKSVFVSDLSGKEIDNDRDAVTITVRYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSHNGGESRR*
Ga0075015_1005632581	3300006102	Watersheds	SGREIANEKDAVTITVKFRDARRGQYLIDAHPDDPEVKQLIEKGRQSARRGRKPKTA*
Ga0070715_109328901	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MARKTIFVSDLSGKEIGDDRDAVTITVKYGDARKGVIVVDAHPEDVEVKRLVQAGRQQARRGR
Ga0066658_101449553	3300006794	Soil	MARKTIFVSDLSGKEIDNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSHNGGESKR*
Ga0066658_104032712	3300006794	Soil	MARKTIFVSDLSGKEIDSERDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVEAGRQQARRGRRPKSENGGESRR*
Ga0066665_102916783	3300006796	Soil	MAKRTIFVSDLSGKEISNERDAVTITIKFSDARRGLYVVDAHPDDSEVKKLISAGRQQARRGRRPKAASSS*
Ga0075524_100807932	3300006950	Arctic Peat Soil	MARKTIFVSDLSGKEIANDRDAVRITVTFGDARKGMFVVDAHPEDVEVKVLTSRGKQQARRGRKPKES*
Ga0066710_1020637181	3300009012	Grasslands Soil	MAKRTIFVSDLSGKEISNERDAVTITIKFGDARRGLYVVDAHPDDSEVKKLISAGRQQARRGRRPKAASSS
Ga0066709_1018589602	3300009137	Grasslands Soil	LARKTIFVSDLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSQNGGESKR*
Ga0075423_116569351	3300009162	Populus Rhizosphere	MARKTIFVSDLSGKEIGNDRDAVTITVKYGDARKGVFVVDAHPDDSEVKRLVRAGRQQARRGRRPKSHNGGGSKR*
Ga0134084_104471021	3300010322	Grasslands Soil	VARKTIFVSDLSGKEIGNDRDAVTITLKYGDARKGVIVVDAHPDDSEVKRLVQVGRQQARRGRRPKSQNGGESKR*
Ga0134063_106894542	3300010335	Grasslands Soil	MARKTILVSDLSGKEIGNDRDAVTITVRYGDARKGVIVVDAHPDDSEVNRLVQAGRQQARRGRRPKSQNGGESKR*
Ga0120164_10313172	3300011987	Permafrost	MARKTIFVSDLSGREIPNDRDAVKITVSFADARKGMFVIDAHPEDAEVKAWTSKGKQQARRGRKPKEA*
Ga0120157_10454962	3300011994	Permafrost	LARKTILVSDLSGKEIHNDRDAVTITVRYGDARKGVVVVDAHPDDSEVKRLVQAGRQQARRGRRPKSQNGGESKR*
Ga0137383_103169603	3300012199	Vadose Zone Soil	VARKTIFVSDLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVEAGRQQVR
Ga0137382_101134594	3300012200	Vadose Zone Soil	LARKTIFVSDLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVEAGRQQARRGRRPKSHNGGESKR*
Ga0137380_102331073	3300012206	Vadose Zone Soil	MARKTVFVSDLSGKEIDNDRDAVTITVRYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSQNGGESKR*
Ga0137381_110342892	3300012207	Vadose Zone Soil	MARKTIFVSDLSGKEIDSERDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVEAGRQQARRGRRPKSQNGGESRA*
Ga0137376_101061761	3300012208	Vadose Zone Soil	VHQFKETTMARKTIFVSDLSGKEIGSDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVQVGRQQARRGRRPKSHNGGESKR*
Ga0137379_102435825	3300012209	Vadose Zone Soil	VARKTIVVSDLSGKEIDNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVKAGRQQARRGRPPKSQNGGESKR*
Ga0137378_112096141	3300012210	Vadose Zone Soil	MARKTVFVSDLSGKQIDNEREAVKITVSFGDARRGVYAIDAHPDDPEVKSLIAKGRQQARRGRRPKASS*
Ga0137370_100624233	3300012285	Vadose Zone Soil	MARKTVFVSDLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSHNGGESKR*
Ga0137366_100499951	3300012354	Vadose Zone Soil	VARKTIFVSDLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLIHAGRQQARTGRRPKS
Ga0137371_106702761	3300012356	Vadose Zone Soil	MAKKTIFVSDLTGKQIENERDAVKITVTFGDARRGVYAIDAHPDDPEVKSLIAKGRQQARRGRRPKAAS*
Ga0137361_115015891	3300012362	Vadose Zone Soil	DLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSHNGGESKR*
Ga0136612_106887042	3300012680	Polar Desert Sand	MARKTIFVSDLSGMEIDDGSAVKITVTFDDARRGMYVIDAHPDDAEVKSLVEKGTKQARRGRKPKAV*
Ga0137398_110430802	3300012683	Vadose Zone Soil	VARKTIFVSDLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPNDSEVKRLVQVGRQQARRGRRPKSHNGGESKR*
Ga0157302_100598912	3300012915	Soil	LARKTIFVSDLSGKEIDNDRDAVTITVKYGDARKGVIVVDAHPDDGEVKRLVQVGRQQARRGRRPKSHNGGESRR*
Ga0164303_109051351	3300012957	Soil	LARKTIFVSDLSGKEIGNDRDAVTITVRYGDARKGVIVVDAHPDDSEVKRLVEAGRQQARRGRRPKSHNGGESKR*
Ga0134087_101883701	3300012977	Grasslands Soil	LARKTIFVSDLSGKEIDNNRDAVTITVKYSDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRTPKSHNGGESKR*
Ga0164305_112935761	3300012989	Soil	VARKTIFVSDLSGKEIGNDRDAVTITVRYGDARKGVIVVDAHPNDSEVKRLVQVGRQQSRRGRRPKSQNGGESKR
Ga0157369_126593981	3300013105	Corn Rhizosphere	IFVSDLSGKEIGNDRDAVTITVRYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSQNGGESKR*
Ga0120150_10399051	3300013294	Permafrost	ELARKTIFVSDLSGKEIHNDRDAVTITVRYGDARKGVVVVDAHPDDSEVKRLVQAGRQQARRGRRPKSQNGGESKR*
Ga0157372_113419622	3300013307	Corn Rhizosphere	MARKTIFVSDLSGKEIGDDRDAVTITVKYGDARKGVVVVDAHPDDAEVKRLVQAGRQQARRGRRPKSHNGGESRR*
Ga0120179_10201392	3300013763	Permafrost	MARKTIFVSDLSGKEIHNDRDAVTITVRYGDARKGVVVVDAHPDDSEVKRLVQAGRQQARRGRRPKAQNGGESKR*
Ga0120111_10128004	3300013764	Permafrost	LARKTIFVSDLSGKEIHNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSQNGGESKR*
Ga0120172_11038162	3300013765	Permafrost	PREGPVMAKRTIFVSDLSGKEIDAKDAVRITVTYTDARRGQVVVDAHPDDDEVKRLVSKGTKQARRGRRPKSAA*
Ga0120125_11588351	3300014056	Permafrost	LARKTIFVSDLSGKEIHNDRDAVTITVRYGDARKGVVVVDAHPDDSEVKRLVQAGRQQARRGRRPGRRRLARPAGS
Ga0134081_103230421	3300014150	Grasslands Soil	KETTMARKTILVSDLSGKEIGNDRDAVTITVRYGDARKGVIFVDAHPDDSEVNRLVQAGRQQARRGRRPKSQNGGESKR*
Ga0134073_100790433	3300015356	Grasslands Soil	VNNLSGKEIDNNRDAVTITVKYSDELKGVIVGDGHPDDSVVKRLVQAGRQQARRGRRPKSENGGESRR*
Ga0132258_119456533	3300015371	Arabidopsis Rhizosphere	VSDLSGKEIDNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVEAGRQQARRGRRPKSHNGGESRR*
Ga0066667_114469392	3300018433	Grasslands Soil	LARKTIFVSDLSGKEIDNNRDAVTITVKYSDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSENGGESRR
Ga0066662_100013844	3300018468	Grasslands Soil	MARKTIFVSDLSGKEIPNERDAVQITVRFGDARRGVFIVDAHPDDPEVNALTDKGRQQARRGRRPKAASAD
Ga0066662_105400373	3300018468	Grasslands Soil	LARKTIFVSDLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPGDGEVKRLVQVGRQQARRGRRPKSQNGGESKR
Ga0066662_123822681	3300018468	Grasslands Soil	VARKTIFVSDLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVEAGRQQARRGRRPKSHNGGESRR
Ga0066669_100474002	3300018482	Grasslands Soil	MARKTVFVSDLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSHNGGESKR
Ga0193751_10324733	3300019888	Soil	MARKTIFVSDLSNREIPNDRDAVTITVKFGDGRRGQYVVDAHPDDAEVKKLISAGRQQARRGRRPKSQNGGESRS
Ga0193751_10693262	3300019888	Soil	MARKTIFVSDLSGREISNPRDAVTITVKFGDARRGVYVVDAHPDDGEVTKLISAGRQQARRGRRPKAQA
Ga0206356_104120452	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MARKTIFVSDLSGKEIGDDRDAVTITVKYGDARKGVIVVDAHPDDAEVKRLVQAGRQQARRGRRPKSHNGGESRR
Ga0206355_11152131	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	MARKTIFVSDLSGKEIGDDRDAVTITVKYGDARKGVIVVDAHPDDAEVKRLVQAGRQQARRGRRPKSHNGGESR
Ga0206350_111578882	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MARKTIFVSDLSGKEIGDDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSQNGGESKR
Ga0193699_100419412	3300021363	Soil	MARKTIVVSDLSGKEIANERDSVKITVTFGDARKGVYVIDAHPDDPEVAVLTSKGRQQARRGRPKKES
Ga0193699_102062702	3300021363	Soil	MARETIVVSDLSGKEIANECDSVKITVTFGDARKGVYVIDAHPDDPEVVALTSKGRQQARRGRPKKES
Ga0247669_10247953	3300024182	Soil	MARKTIFVSDLSGKEIGDDRDAVTITVKYGDARKGVIVVDAHPDDAEVKRLVQAGRQQAR
Ga0247664_10070834	3300024232	Soil	SGKEIGDDRDAVTITVKYGDARKGVIVVDAHPDDAEVKRLVQAGRQQARRGRRPKSHNGGESRR
Ga0247664_10179364	3300024232	Soil	MARKTIFVSDLSGKEIGDDRDAVTITVKYGDARKGVIVVDAHPDDAEVKRLVQAGRQQA
Ga0247661_10676752	3300024254	Soil	MARKTIFVSDLSGKEIGDDRDAVTITVKYGDARKGVIVVDAHPDDAEVKRLVQAGRQQARRGR
Ga0247668_10400383	3300024331	Soil	MARKTIFVSDLSGKEIGDDRDAVTITVKYGDARKGVIVVDAHPDDAEVKRLVQAGRQ
Ga0209638_10173344	3300025725	Arctic Peat Soil	MARKTIFVSDLSGREIANDRDAVKISVTFGDARKGMFVVDAHPEDAEVKVLTSKGKQQARRGRKPKAD
Ga0209638_10811262	3300025725	Arctic Peat Soil	VARKTIFVSDLSGREIANDRDAVKISVTFGDARKGMYVVDAHPDDAEVKALTSKGKQQARRGRKPAAA
Ga0209585_100480191	3300025891	Arctic Peat Soil	MARKTIFVSDLSGKEIANDRDAVRITVTFGDARKGMFVVDAHPDDAEVKVLTSKGKQQARRGRKPKAA
Ga0207692_102431611	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MARKTIFVSDLSGKEIGDDRDAVTITVKYGDARKGVIVVDAHPEDVEVKRLVQAGRQQARRGRRPKSHNGGES
Ga0207695_106978063	3300025913	Corn Rhizosphere	MARKTIFVSDLSGKEIGDDRDAVTITVKYGDARKGVIVVDAHPDDAEVKRLVQA
Ga0207646_113541892	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MARKTIFVSDLSGKEIGDDRDAVTITVKYGDARKGVIVVDAHPED
Ga0207687_109176501	3300025927	Miscanthus Rhizosphere	MARKTIFVSDLSGKEIGNDRDAVTITVRYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSQNGGESKR
Ga0209154_11294842	3300026317	Soil	LARKTIFVSDLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPDDNEVKRLVEAGRQQARRGRRPKSHNGGESRR
Ga0209267_12260072	3300026331	Soil	KERELARKTIFVSDLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPDDNEVKRLVEAGRQQARRGRRPKSHNGGESRR
Ga0257147_10061992	3300026475	Soil	VARKTIFVSDLSGKEIGNDRDAVTITVKYGDARKGVVVVDAHPDDSEVKRLVRAGRQQARRGRRPKSHNGGESRR
Ga0209805_12530922	3300026542	Soil	FVSDLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPDDNEVKRLVEAGRQQARRGRRPKSHNGGESRR
Ga0209579_10000004383	3300027869	Surface Soil	MARKTVFVSDLSGKEISNERDAVTITVKFGDARRGQYSVDAHPDDAEVKRLISAGTQQARRGRRPKAASS
Ga0247683_10240091	3300027991	Soil	MARKTIFVSDLSGKEIGDDRDAVTITVKYGDARKGVIVVDAHPDDAEVRRLVQAGRQQARRGRRPKSHNGGESRR
Ga0247675_10657212	3300028072	Soil	MARKTIFVSDLSGKEIGDDRDAVTITVKYGDARKGVIVVDAHPDDAEVKRLVQAGR
Ga0247684_10514221	3300028138	Soil	MARKTVFVSDLSGKEIDNDRDAVTITVRYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSQNGGESKR
Ga0265338_1000913713	3300028800	Rhizosphere	MARKTVFVSDLSGKEINDAEAVQITVKFADARKGLYVIDAHPDDAEVKLLIEKGTKQARRGRKPREETG
Ga0307503_100014494	3300028802	Soil	VARKTIFVSDLSGKEIDSDRDAVTITVKYGDARKGVIVVDAHPGDSEVKRLVQVGRQQARRGRRPKSHNGGESKR
Ga0307277_103178561	3300028881	Soil	MARKTIFVSDLSNRELDDNDHVTITVKFSDARRGQYVVDAHPDDSEVKRLLNAGTRQARRGRRPKSS
Ga0299907_109492561	3300030006	Soil	MARKTVLVSDLTGKELAPQESVRITVNFADTRRGVYVLDAHPDDPDVKKLIEKGTKQ
Ga0307495_101311151	3300031199	Soil	MARKTVLVSDLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVQAGRQQARRGRRPKSQNGGESKR
Ga0308175_1004110201	3300031938	Soil	LARKTIFVSDLSGKEIGNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKQLVQVGRQQARRGRRPKSQNGGESKR
Ga0308175_1006022063	3300031938	Soil	LARKTIFVSDLSGKEISNDRDAVTITVKYGDARKGVIVVDAHPDDSEVKRLVEAGRQQARRGRRPKSHNGGESRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064123

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences