Metagenome Family F064066

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064066
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	102 residues
Representative Sequence	SDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDTSVATAYRRYPNMEDEDIRFILGIVEGYQRDLRVYNGQNRRSDCGGCR
Number of Associated Samples	100
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.78 %
% of genes near scaffold ends (potentially truncated)	97.67 %
% of genes from short scaffolds (< 2000 bps)	89.92 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.589 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (14.729 % of family members)
Environment Ontology (ENVO)	Unclassified (48.062 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (69.767 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.02% β-sheet: 0.00% Coil/Unstructured: 38.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.118.8.0: automated matches	d5mjza_	5mjz	0.79148
a.118.8.0: automated matches	d6kp3a_	6kp3	0.78472
a.29.6.0: automated matches	d1xg2b1	1xg2	0.75563
a.118.8.1: Tetratricopeptide repeat (TPR)	d1zb1a_	1zb1	0.75476
a.118.8.1: Tetratricopeptide repeat (TPR)	d1ihga1	1ihg	0.74765

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF13360	PQQ_2	5.43
PF02836	Glyco_hydro_2_C	5.43
PF00085	Thioredoxin	2.33
PF04365	BrnT_toxin	1.55
PF13570	PQQ_3	1.55
PF13316	DUF4087	1.55
PF02738	MoCoBD_1	0.78
PF00155	Aminotran_1_2	0.78
PF02423	OCD_Mu_crystall	0.78
PF02837	Glyco_hydro_2_N	0.78
PF08447	PAS_3	0.78
PF04545	Sigma70_r4	0.78
PF13432	TPR_16	0.78
PF02311	AraC_binding	0.78
PF07495	Y_Y_Y	0.78
PF00291	PALP	0.78
PF08448	PAS_4	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	6.20
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	1.55
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.78
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.59 %
Unclassified	root	N/A	43.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.59 %
Unclassified	root	N/A	43.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.59 %
Unclassified	root	N/A	43.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.41 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	36.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.33 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.78 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.41 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	26.36 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.78 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.36 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.78 %
Rhodothermaeota	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.36 %
Rhodothermia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota → Rhodothermia	0.78 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.78 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.78 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.36 %
Rhodothermales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota → Rhodothermia → Rhodothermales	0.78 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.78 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	0.78 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.36 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.78 %
Rubricoccaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota → Rhodothermia → Rhodothermales → Rubricoccaceae	0.78 %
Nannocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae	0.78 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.36 %
Rubrivirga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota → Rhodothermia → Rhodothermales → Rubricoccaceae → Rubrivirga	0.78 %
Nannocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis	0.78 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.78 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.36 %
Rubrivirga marina	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota → Rhodothermia → Rhodothermales → Rubricoccaceae → Rubrivirga → Rubrivirga marina	0.78 %
Nannocystis pusilla	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis → Nannocystis pusilla	0.78 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.78 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725003\|GPWSG_F5G3JLY01CP3GS	Not Available	505	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2069533	Not Available	589	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_13996295	Not Available	575	Open in IMG/M
3300000956\|JGI10216J12902_110299204	Not Available	999	Open in IMG/M
3300004016\|Ga0058689_10186426	Not Available	500	Open in IMG/M
3300004114\|Ga0062593_100160716	All Organisms → cellular organisms → Bacteria → Acidobacteria	1722	Open in IMG/M
3300004156\|Ga0062589_100340734	Not Available	1184	Open in IMG/M
3300004480\|Ga0062592_101068732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300004643\|Ga0062591_101447694	Not Available	684	Open in IMG/M
3300005289\|Ga0065704_10317895	Not Available	857	Open in IMG/M
3300005293\|Ga0065715_10371423	Not Available	920	Open in IMG/M
3300005294\|Ga0065705_10635574	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300005328\|Ga0070676_10420147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	934	Open in IMG/M
3300005331\|Ga0070670_100026677	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	4970	Open in IMG/M
3300005332\|Ga0066388_102598044	Not Available	922	Open in IMG/M
3300005333\|Ga0070677_10729968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300005335\|Ga0070666_10943072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300005336\|Ga0070680_101095929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300005337\|Ga0070682_101308258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300005340\|Ga0070689_100957934	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300005341\|Ga0070691_10434009	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300005343\|Ga0070687_100576163	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300005343\|Ga0070687_101393861	Not Available	524	Open in IMG/M
3300005345\|Ga0070692_10314198	Not Available	961	Open in IMG/M
3300005353\|Ga0070669_101264353	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300005354\|Ga0070675_101469348	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300005365\|Ga0070688_100880959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300005455\|Ga0070663_101601452	Not Available	581	Open in IMG/M
3300005457\|Ga0070662_100950114	Not Available	735	Open in IMG/M
3300005468\|Ga0070707_100021215	All Organisms → cellular organisms → Bacteria	6139	Open in IMG/M
3300005536\|Ga0070697_101937491	Not Available	527	Open in IMG/M
3300005543\|Ga0070672_101107554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300005544\|Ga0070686_100284726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1220	Open in IMG/M
3300005563\|Ga0068855_101480728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300005563\|Ga0068855_102620497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300005577\|Ga0068857_102445475	Not Available	513	Open in IMG/M
3300005578\|Ga0068854_101084243	Not Available	713	Open in IMG/M
3300005578\|Ga0068854_101993827	Not Available	535	Open in IMG/M
3300005615\|Ga0070702_100216126	Not Available	1279	Open in IMG/M
3300005616\|Ga0068852_102805188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300005617\|Ga0068859_101381449	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300005617\|Ga0068859_101581831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300005617\|Ga0068859_102927972	Not Available	522	Open in IMG/M
3300005618\|Ga0068864_100724551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	973	Open in IMG/M
3300005618\|Ga0068864_101807185	Not Available	616	Open in IMG/M
3300005618\|Ga0068864_102323839	Not Available	542	Open in IMG/M
3300005718\|Ga0068866_11047917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300005719\|Ga0068861_100409305	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300005719\|Ga0068861_101792252	Not Available	609	Open in IMG/M
3300005719\|Ga0068861_102032663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300005842\|Ga0068858_100313385	All Organisms → cellular organisms → Bacteria → Acidobacteria	1498	Open in IMG/M
3300005842\|Ga0068858_102175476	Not Available	548	Open in IMG/M
3300005843\|Ga0068860_101965311	Not Available	606	Open in IMG/M
3300005844\|Ga0068862_100030753	All Organisms → cellular organisms → Bacteria	4526	Open in IMG/M
3300005844\|Ga0068862_100951603	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Rhodothermaeota → Rhodothermia → Rhodothermales → Rubricoccaceae → Rubrivirga → Rubrivirga marina	847	Open in IMG/M
3300006049\|Ga0075417_10401956	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300006049\|Ga0075417_10553116	Not Available	582	Open in IMG/M
3300006169\|Ga0082029_1389890	Not Available	843	Open in IMG/M
3300006845\|Ga0075421_100642645	All Organisms → cellular organisms → Bacteria → Acidobacteria	1241	Open in IMG/M
3300006847\|Ga0075431_100824833	Not Available	900	Open in IMG/M
3300006852\|Ga0075433_10070088	All Organisms → cellular organisms → Bacteria → Proteobacteria	3080	Open in IMG/M
3300006853\|Ga0075420_101208754	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300006876\|Ga0079217_10183915	Not Available	1050	Open in IMG/M
3300006904\|Ga0075424_101145826	All Organisms → cellular organisms → Bacteria → Acidobacteria	828	Open in IMG/M
3300006918\|Ga0079216_10000498	All Organisms → cellular organisms → Bacteria → Proteobacteria	9525	Open in IMG/M
3300006918\|Ga0079216_10129803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1277	Open in IMG/M
3300006954\|Ga0079219_10089409	Not Available	1476	Open in IMG/M
3300006954\|Ga0079219_11074205	Not Available	679	Open in IMG/M
3300007004\|Ga0079218_10333287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1253	Open in IMG/M
3300007004\|Ga0079218_10364019	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300009092\|Ga0105250_10346880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300009100\|Ga0075418_11989106	Not Available	633	Open in IMG/M
3300009147\|Ga0114129_10089709	All Organisms → cellular organisms → Bacteria	4261	Open in IMG/M
3300009147\|Ga0114129_10321535	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Nannocystaceae → Nannocystis → Nannocystis pusilla	2057	Open in IMG/M
3300009147\|Ga0114129_13323549	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300009156\|Ga0111538_12268240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300009162\|Ga0075423_10023095	All Organisms → cellular organisms → Bacteria → Acidobacteria	6196	Open in IMG/M
3300009162\|Ga0075423_11207394	All Organisms → cellular organisms → Bacteria → Acidobacteria	807	Open in IMG/M
3300009162\|Ga0075423_11795805	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300009553\|Ga0105249_10791366	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300009553\|Ga0105249_11557388	Not Available	733	Open in IMG/M
3300010036\|Ga0126305_10139505	All Organisms → cellular organisms → Bacteria → Acidobacteria	1498	Open in IMG/M
3300010362\|Ga0126377_10724179	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300010362\|Ga0126377_13350215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300010375\|Ga0105239_12315610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300010375\|Ga0105239_12900623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300010399\|Ga0134127_10202475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1847	Open in IMG/M
3300010399\|Ga0134127_11570563	Not Available	732	Open in IMG/M
3300010399\|Ga0134127_12366509	Not Available	611	Open in IMG/M
3300010399\|Ga0134127_13226874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300010400\|Ga0134122_11522194	Not Available	689	Open in IMG/M
3300010401\|Ga0134121_11948529	Not Available	618	Open in IMG/M
3300010401\|Ga0134121_12152861	Not Available	593	Open in IMG/M
3300011433\|Ga0137443_1217717	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	569	Open in IMG/M
3300012958\|Ga0164299_11288498	Not Available	558	Open in IMG/M
3300012989\|Ga0164305_11740314	Not Available	561	Open in IMG/M
3300013308\|Ga0157375_11994254	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300014326\|Ga0157380_11886481	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300015262\|Ga0182007_10143328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300018422\|Ga0190265_10021092	All Organisms → cellular organisms → Bacteria → Acidobacteria	5202	Open in IMG/M
3300021408\|Ga0193708_1091461	Not Available	537	Open in IMG/M
3300024310\|Ga0247681_1048881	Not Available	647	Open in IMG/M
3300025903\|Ga0207680_10866640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300025917\|Ga0207660_10366910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1156	Open in IMG/M
3300025918\|Ga0207662_10950524	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300025922\|Ga0207646_10182536	All Organisms → cellular organisms → Bacteria	1895	Open in IMG/M
3300025924\|Ga0207694_10443691	Not Available	1083	Open in IMG/M
3300025925\|Ga0207650_10046478	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3196	Open in IMG/M
3300025926\|Ga0207659_11589824	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300025926\|Ga0207659_11911824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300025932\|Ga0207690_11862171	Not Available	502	Open in IMG/M
3300025941\|Ga0207711_10396518	Not Available	1282	Open in IMG/M
3300025961\|Ga0207712_11533499	Not Available	597	Open in IMG/M
3300026035\|Ga0207703_11984039	Not Available	558	Open in IMG/M
3300026075\|Ga0207708_10083440	All Organisms → cellular organisms → Bacteria → Acidobacteria	2456	Open in IMG/M
3300026075\|Ga0207708_11739919	Not Available	547	Open in IMG/M
3300026088\|Ga0207641_11082858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300026095\|Ga0207676_12317463	Not Available	534	Open in IMG/M
3300026118\|Ga0207675_100132168	Not Available	2367	Open in IMG/M
3300026142\|Ga0207698_10864711	Not Available	910	Open in IMG/M
3300027886\|Ga0209486_10053391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2031	Open in IMG/M
3300027909\|Ga0209382_10929145	All Organisms → cellular organisms → Bacteria → Acidobacteria	913	Open in IMG/M
3300027909\|Ga0209382_11131775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300028381\|Ga0268264_11957154	Not Available	595	Open in IMG/M
3300031716\|Ga0310813_11583983	Not Available	611	Open in IMG/M
3300031740\|Ga0307468_102081233	Not Available	546	Open in IMG/M
3300031901\|Ga0307406_12097537	Not Available	506	Open in IMG/M
3300032005\|Ga0307411_11962360	Not Available	546	Open in IMG/M
3300033412\|Ga0310810_10265406	All Organisms → cellular organisms → Bacteria → Acidobacteria	1876	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	57.36%
Environmental	Environmental	42.64%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	57.36%
Terrestrial	Environmental → Terrestrial	41.86%
Aquatic	Environmental → Aquatic	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	34.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.48%
Sediment	Environmental → Aquatic → Sediment	0.78%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	20.93%
Loam	Environmental → Terrestrial → Soil → Loam	13.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	20.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.10%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	14.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	6.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.20%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.43%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.88%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.55%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.78%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725003	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300021408	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c1	Environmental	Open in IMG/M
3300024310	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPWSG_02658290	2067725003	Soil	KAAIPLKVHLSYFDVRRKCMVEEVQEARLVPAESESCELLADVEVKKNYTIAQLADSLFEMTGLARRGNYAQALSALDTSVATAYRRYPNMEDGDIRFILDIVEGYRRDLRVYNEHSRKHDCGGCR
ICChiseqgaiiDRAFT_20695331	3300000033	Soil	LTQVVMAKFRTESSKASIPVKVRLSYFDVKRRCVVEEVQDLRLVPAENESCDVLADVEVKKNYTIAELADSLFEMTGLARRGDYSQAQNVLDASVATAYRRYPNMEDEDXRFILDIVEGYRRDLRVYNEHSRKFDCGNCR*
ICChiseqgaiiFebDRAFT_139962951	3300000363	Soil	LTQVVMAKFRTESSKASIPVKVRLSYFDVKRRCVVEEVQDLRLVPAENESCDVLADVEVKKNYTIAELADSLFEMTGLARRGDYSQAQNVLDASVATAYRRYPNMEDEDIRFILDIVEGYRRDLKVYNAHSRRFDCGNCR*
JGI10216J12902_1102992042	3300000956	Soil	KNFTIAQHADSLFEMTGFARRGNYAQALNALDASVATAYNRYPNMEDGDIRFILDIVEGYRRDLRVYNQHTRKSDCGGCR*
Ga0058689_101864262	3300004016	Agave	RKCMVEEVQDAQLVPAENDSCELLMDVEVKKNYTIAQLADSLFEMTGFARRGNYSQALNALDASVATAYNRYPNMEDGDIRFILDIVEGYRRDLRVYNQHSRKSDCGGCR*
Ga0062593_1001607161	3300004114	Soil	LARSGNYTLAQSVLDVSVSTAYRRYPNMEDEDIRFIIDIVEGYRRDLRVYNEYSRKHDCGSCR*
Ga0062589_1003407341	3300004156	Soil	NYTIAELADSLFRMANLARSGNYTLAQSVLDVSVSTAYRRYPNMEDEDIRFIIDIVEGYRRDLRVYNEYSRKHDCGSCR*
Ga0062592_1010687322	3300004480	Soil	DLRLVPAERESCDPLVDLEVKKNFTIAELADSLFQMTEFARRGNYTQAQSVLDASLATAQTRYPYKEDEDIRFILDIVEGYRRDLLVYNQFNRRSDCGSCR*
Ga0062591_1014476941	3300004643	Soil	AQSFNTQLPVKVRLSYFDVKRKCTVEEVQELRLVPGESDRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQSALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0065704_103178952	3300005289	Switchgrass Rhizosphere	AELADSLYAMAGLARGGNYSQAQNVLDASLSTAYRRYPNMEDEDIRFILDIVEGYRRDLKVYNEQNRKHDCGSCR*
Ga0065715_103714232	3300005293	Miscanthus Rhizosphere	IAGLADSLFQMAGLARNGDYSQALNALDGAVATAYRRYPNMEDEDIRFILGIVEGYQRDLKVYNEQFHRRDCGSCR*
Ga0065705_106355741	3300005294	Switchgrass Rhizosphere	FDVKRKCTVEEVQELRLVPAESDRCDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQKDLKTYNGYQRKSDCGGCR*
Ga0070676_104201472	3300005328	Miscanthus Rhizosphere	NGLTQVVLAKFRAGDVRAPMPVKIRLSYFDVKRKCVVEEVQEARLVPAENDSCELLSDVEVKKNYTIAQLADSLFEMTGLARRGNYTQALNTLDTSVTSAYRRYPNMEDTDIRFILDIVEGYRRDLRVFNQQSRHSDCGGCR*
Ga0070670_1000266772	3300005331	Switchgrass Rhizosphere	AELANSLYEMTSFARRGNFSLAQNTLDASISTAYQRYPNMEDEDIKFILGIVEGYQRDLKVYNGYNRRSDCGGCR*
Ga0066388_1025980441	3300005332	Tropical Forest Soil	GLTQVIVAKFRAESLKGAMPVKVRLSYVDVKRNCTVSEVQELRLVPSDGESCELLADVEVKKNYTIAELADSLFQMTGLARSGNYAKAQNTLDASVATAYRRYPNMEDQDIKFILDIVEGYRRDLRVYSRQSDCGGCR*
Ga0070677_107299681	3300005333	Miscanthus Rhizosphere	VEEVQDLQLVPAERGTSDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDEDIRFILEIVEGYQRDLRVYNGQNRRSDCGGCR*
Ga0070666_109430721	3300005335	Switchgrass Rhizosphere	VEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPSMEDQDIRFILEIVEGYQRDLRVYNQQNRRHDCGGCR*
Ga0070680_1010959291	3300005336	Corn Rhizosphere	IAQLADSLFEMTGLARRGNYTQALNTLDTSVTSAYRRYPNMEDTDIRFILDIVEGYRRDLRVFNQQSRHSDCGGCR*
Ga0070682_1013082581	3300005337	Corn Rhizosphere	VEEVQDLQLVPAERDPSDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATVYRRYPNTEDEDIRFILAIVEGYQRDLRVYNGQNRRSDCGGCR*
Ga0070689_1009579342	3300005340	Switchgrass Rhizosphere	RRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0070691_104340092	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	GESDRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0070687_1005761631	3300005343	Switchgrass Rhizosphere	DVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0070687_1013938611	3300005343	Switchgrass Rhizosphere	RLTYYDVKRRCRVEEVQEVRLMSTESESCDLLADVEVKKNYTIAELADSLFQMAGLARNGDYSQALNALDGAVATACRRYPNMEDEDIRFILGIVEGYQRDLKVYNEQFHRRDCGSCR*
Ga0070692_103141982	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	SVANPTTVKVRLSYFDVKRKCKVEEVQDLQLVLAERDSSDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNALDASVATAYRRYPNMEDEDIRFILGIVEGYQRDLRVFNEQSRRHDCGGCR*
Ga0070669_1012643531	3300005353	Switchgrass Rhizosphere	PGESDRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0070675_1014693482	3300005354	Miscanthus Rhizosphere	ELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0070688_1008809592	3300005365	Switchgrass Rhizosphere	PAERDASDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDQDIRFILEIVEGYQRDLRVYNQQNRRHDCGGCR*
Ga0070663_1016014521	3300005455	Corn Rhizosphere	VSNPAPVKVRLTYFDVKRQCTVEEVQDLRLVPVESDPCDLLADVEVKKNYTIAVLADSLSEMKSLAQRGSFAQALNALDASVSTAYQRYPNMEDEDIKFILDIVNGYRRDLKIYTDYQRKSDCGSCR*
Ga0070662_1009501141	3300005457	Corn Rhizosphere	APMPVKIRLSYFDVKRKCVVEEVQEARLVPAENDSCELLSDVEVKKNYTIAQLADSLFEMTGLARRGNYTQALNTLDTSVTSAYRRYPNMEDTDIRFILDIVEGYRRDLRVFNQQSRHSDCGGCR*
Ga0070707_1000212151	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	SDSCDVLADVEVKKNYTIAELADSLYAMAGLARGGNYSQAQNVLDASVSTAYRRYPNMEDTDIRFILDIVEGYRRDLKVYNEYSRKHDCGSCR*
Ga0070697_1019374911	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LVPAENDSCDVLADVEVKKNYTIAELADSLYAMAGLARGGNYSQAQNVLDGSVSTAYHRYPNMEDEDIRFILDIVEGYRRDLKVYNEYSRKHDCGSCR*
Ga0070672_1011075541	3300005543	Miscanthus Rhizosphere	EVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDQDIRFILEIVEGYQRDLRVYNQQNRRHDCGGCR*
Ga0070686_1002847262	3300005544	Switchgrass Rhizosphere	KKNYTIAQLADSLFEMTGLARRGNYTQALNTLDTSVTSAYRRYPNMEDTDIRFILDIVEGYRRDLRVFNQQSRHSDCGGCR*
Ga0068855_1014807282	3300005563	Corn Rhizosphere	VVMAKFRTESLTNPLPVKVRLSYFDVKRKCKVEEVQELQLLPAENDSCDLLADVEVKKNYTIAELADSLFQMAGLARSGNYPQALNALDGSVATAYRRYPNMEDEDIRFILGIVEGYQRDLKVYNEQFHRRDCGGCR*
Ga0068855_1026204971	3300005563	Corn Rhizosphere	RRKCTVEEVQELRLEPAESDSCDLLVDVEVKKNYTIAELADSLFAMAGFARSGNYSQAQNVLDSSVTAAYQRYPHMEDEDIRFILNIVEGYQRDLKVYNAHYRKGECGGCR*
Ga0068857_1024454751	3300005577	Corn Rhizosphere	SMTKPMAVKVRLSYFDVKRKCRVEEVQDLQLVPAERDASDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDEDIRFILAIVEGYQRDLRVYNGQNRRSDCGGCR*
Ga0068854_1010842432	3300005578	Corn Rhizosphere	RLVPAENDSCELLNDVEVKKNFTIAQLADSLFEMTGFARRGNYSQALNAVETSVATAYRRYPNMEDNDIRFILDIVEGYRRDLKVYNDYSRPRSDCGGCR*
Ga0068854_1019938271	3300005578	Corn Rhizosphere	TESLTNPLPVKVRLSYFDVKRKCKVEEVQELQLLPAENDSCDLLADVEVKKNYTIAELADSLFQMAGLARSGNYPQALNALDGSVATAYRRYPNMEDEDIRFILGIVEGYQRDLKVYNEQFHRRDCGGCR*
Ga0070702_1002161261	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	LVPSENDSCELLADVEVKKNYTIAELADSLFRMANLARSGNYTLAQSVLDVSVSTAYRRYPNMEDEDIRFIIDIVEGYRRDLRVYNEYSRKHDCGSCR*
Ga0068852_1028051882	3300005616	Corn Rhizosphere	SDLLADVEVKKNYTIAELADSLFAMAGLARSGNYSQALNTLNASVATAYRRYPNMEDEDIRFILGIVEGYQRDLRVYCR*
Ga0068859_1013814491	3300005617	Switchgrass Rhizosphere	GLTQVVMAKFRTDSVGNTLPVKVRLSYFDVKRKCRVEEVQDLQLVPAERDTSDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDEDIRFILAIVEGYQRDLRVYTGQNRRSDCGGCR*
Ga0068859_1015818311	3300005617	Switchgrass Rhizosphere	LTQVVMARFRTDSVGTTLPVKVRLTYFDVKRKCRVEEVQDLQLVPAERDTSDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPSMEDEDIRFILGIVEGYQRDLRVCNHR*
Ga0068859_1029279721	3300005617	Switchgrass Rhizosphere	DVEVKKNYTIAQLADSLFEMTGLARRGNYTQALNTLDTSVASAYRRYPNMEDTDIRFILDIVEGYRRDLRVFNQQSRHSDCGGCR*
Ga0068864_1007245512	3300005618	Switchgrass Rhizosphere	VLAKFRAGDVRAPMPVKIRLSYFDVKRKCVVEEVQEARLVPAENDSCELLSDVEVKKNYTIAQLADSLFEMTGLARRGNYTQALNTLDTSVTSAYRRYPNMEDTDIRFILDIVEGYRRDLRVFNQQSRHSDCGGCR*
Ga0068864_1018071851	3300005618	Switchgrass Rhizosphere	VRLSYFDVKRKCTVEEVQELRLVPGESDRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0068864_1023238391	3300005618	Switchgrass Rhizosphere	NNGLTQVIMAKFKAQSFNTQLPVKVRLSYFDVKRKCTVEEVQELRLVPGESDRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0068866_110479172	3300005718	Miscanthus Rhizosphere	VQDLQLVPAERDTSDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDEDIRFILGIVEGYQRDLRVYTEQNRR*
Ga0068861_1004093051	3300005719	Switchgrass Rhizosphere	DSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDEDIRFILEIVEGYQRDLRVYNGQNRRDCGGCR*
Ga0068861_1017922521	3300005719	Switchgrass Rhizosphere	LSYFDVKRKCPVEEVQELRLVPSENDSCELLADVEVKKNYTIAELADSLFRMANLARSGNYTLAQSVLDVSVSTAYRRYPNMEDEDIRFIIDIVEGYRRDLRVYNEYSRKHDCGSCR*
Ga0068861_1020326631	3300005719	Switchgrass Rhizosphere	VEVKKNYTIAELADSLFVMTGLARSGNYSQALNTLDASVATAYRRYPSMEDEDIRFILGIVEGYQRDLRVYNGQNRRHDCGGCR*
Ga0068858_1003133851	3300005842	Switchgrass Rhizosphere	VVMAEFRADAVKGALPVKVRLSYFDVKRKCPVEEVQELRLVPSENDSCELLADVEVKKNYTIAELADSLFRMANLARSGNYTLAQSVLDVSVSTAYRRYPNMEDEDIRFIIDIVEGYRRDLRVYNEYSRKHDCGSCR*
Ga0068858_1021754761	3300005842	Switchgrass Rhizosphere	VKVLLSYYDVKRKCTVQEVQELRLVPAESDSCELLADVEVKKNYTIAELADSLFQMAGLARSGQYAQAQNVLDASVSTAYRRYPNMEDEDIRFIIDIVDGYRRDLRVYNEFSHKHDCGSCR*
Ga0068860_1019653111	3300005843	Switchgrass Rhizosphere	DVEVKKNYTIAELADSLFQMAGLARSVQYAQAQNVLDASVSTAYRRYPNMEDEDIRFIIDIVDGYRRDLRVYNEFSHKHDCGSCR*
Ga0068862_1000307531	3300005844	Switchgrass Rhizosphere	VLAKFRAGDVRAPMPVKIRLSYFDVKRKCVVEEVQEARLVPAENDSCELLSDVEVKKNYTIAQLADSLFEMTGLARRGNYTQALNTLDTSVASAYRRYPNMEDTDIRFILDIVEGYRRDLRVFNQQSRHSDCGGCR*
Ga0068862_1009516032	3300005844	Switchgrass Rhizosphere	SDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDEDIRFILEIVEGYQRDLRVYNRHDCGGCR*
Ga0075417_104019561	3300006049	Populus Rhizosphere	YYDVRRKCTVEEVQELRLEPVESDSCDLLVDVEVKKNYTIAELADSLFAMAGLARSGNYSQAQNVLDSSVTAAYQRYPHMEDEDIRFILNIVEGYQRDLKVYNAHYRKGECGGCR*
Ga0075417_105531162	3300006049	Populus Rhizosphere	SYHDVKRNCLVTEVQELRLVPSDGESCELLADVEVKKNYTIAELADALFQMSGLARSGNYAQAQNALDGSVATAYRRYPNMEDQDIKFILDIVEGYRRDLRVYNAQSHRPDCGGCR*
Ga0082029_13898902	3300006169	Termite Nest	SPMPVKVFLSYYDVKRKCNVEEVQEARLVPAETDSCELLSDVEVKKNYTIAQLADSLFEMAGLARRGSYSQALNALDASVATAYQRYPNMEDGDIRFILDIVEGYRRDLRVFSGNPCSRCR*
Ga0075421_1006426451	3300006845	Populus Rhizosphere	PRPPVKVRLSYFDVKRKCVVEEVQELRLVPSERDSCDSLVDLEVKKNYTIAELADSLFQMTGFARGGNYSQAQNVLDASLASAHTRYPYMEDEDIRFILDIVEGYRRDLQMYNGHRRIGDCVGCR*
Ga0075431_1008248332	3300006847	Populus Rhizosphere	DSLLEMTGLARRGRYSQALNSLDTSAALAYRRYPNMEDGDIRFILDIVEGYRRDLRVFNQHSRQSDCGGCR*
Ga0075433_100700881	3300006852	Populus Rhizosphere	KRKCVVEEVQELRLVPSERDSCDSLVDLEVKKNTIAELADSLFQMTGFARGGNYSQAQNVLDASLASAHTRYPYMEDEDVRFILDIVEGYRRDLQMYNGHRRIGDCGGCR*
Ga0075420_1012087541	3300006853	Populus Rhizosphere	EVKKNFTIAELADSLFSMAGLARGGQYLQAQNTLDASVATAYRRYPNMEDHDIRFILDIVEGYRRDLKVYNEHSRRSECGGCR*
Ga0079217_101839152	3300006876	Agricultural Soil	QELQLVPAEDETCDLLADVEVKKNYTIAELADSLLEMTGLARRGSYSQAQSVLDASVATAYRRYPNMEDEDIRFILGIVEGYRRDLKVYNEHSRKFDCGNCR*
Ga0075424_1011458262	3300006904	Populus Rhizosphere	VRLSYFDVKRKCVVEEVQELRLVPSERDSCDSLVDLEVKKNTIAELADSLFQMTGFARGGNYSQAQNVLDASLASAHTRYPYMEDEDVRFILDIVEGY
Ga0079216_100004986	3300006918	Agricultural Soil	VKKNYTIAQLADSLLEMTGLARRGRYSQALNALDTSAALAYRRYPNMEDGDIRFILDIVEGYRRDLRVFNQHSRQSDCGGCRQ*
Ga0079216_101298031	3300006918	Agricultural Soil	EMQELQLVPAEDETCDLLADVEVKKNYTIAELADSLLEMTGLARRGSYSQAQSVLDASVATAYRRYPNMEDEDIRFILGIVEGYRRDLKVYNEHSRKFDCGNCR*
Ga0079219_100894091	3300006954	Agricultural Soil	YFDVKRKCKVEEVQELQLLPAENDSCDLLADVEVKKNYTIAELADSLFQMAGLARSGNYPQALNALDGSVATAYRRYPNMEDEDIRFILGIVEGYQRDLKVYNEQFHRRDCGGCR*
Ga0079219_110742051	3300006954	Agricultural Soil	QMAGLARNGNYAQAQNVLEASVSTAYRRYPNMEDEDIRFIIDIVEGYRRDLRVYNEFSHKHDCGSCR*
Ga0079218_103332871	3300007004	Agricultural Soil	LFEMTGFARRGNYSQALNTLDASVATAYNRYPNMEDGDIRFILDIVEGYRRDLRVYNQQSRKSDCGGCR*
Ga0079218_103640192	3300007004	Agricultural Soil	LSYYDVRRKCMVEDVQEARLVLAESDSCDLLADVEVKKNYTIAQLADSLFEMTGLARRGNYSQALSALDASVRSAYHRYPNMEDGDIRFILDIVEGYRRDLRVYNQHSSKHDCGGCR*
Ga0105250_103468802	3300009092	Switchgrass Rhizosphere	DSLFAMTGLARSGNYSQALNTLDAWVATAYRRYPNMEDEDIRFILEIVEGYQRYLRLYNGQNRRDCGGCR*
Ga0075418_119891061	3300009100	Populus Rhizosphere	ELADSLFRMANVARTGNYALAQSVLDASVSTAYRRYPNMEDEDIRFIIDIVEGYRRDLRVYNEYSRKRDCGTCR*
Ga0114129_100897096	3300009147	Populus Rhizosphere	VVEEVQELRLVPSERDSCDSLVDLEVKKNTIAELADSLFQMTGFARGGNYSQAQNVLDASLASAHTRYPYMEDEDVRFILDIVEGYRRDLQMYNGHRRIGDCVGCR*
Ga0114129_103215354	3300009147	Populus Rhizosphere	ENDSCELLADVEVKKNYTIAELADSLFRMANVARTGNYALAQSVLDASVSTAYRRYPNMEDEDIRFIIDIVEGYRRDLRVYNEYSRKRDCGTCR*
Ga0114129_133235491	3300009147	Populus Rhizosphere	EVKKNYTIAELADSLFDMTGLARRGNYSQALNALDASVSTAYRRYPNMEDEDIRFILDIVQGYQRDLRVFTAHSPRSDCGSCR*
Ga0111538_122682401	3300009156	Populus Rhizosphere	VQEARLVPAENDSCELLADVEVKKNYTIAQLADSLFEMTGLARRGNYSQALNALDASVATAYQRYPNMEDGDIRFILDIVEGYRRDLRVYHQHSRQTDCGGCR*
Ga0075423_100230951	3300009162	Populus Rhizosphere	LFQMTGFARGGNYSQAQNVLDASLASAHTRYPYMEDEDVRFILDIVEGYRRDLQMYNGHRRIGDCVGCR*
Ga0075423_112073942	3300009162	Populus Rhizosphere	EETQQLKLVPSEGGSCDLLADVEVKKNYTIAELADSLFAMAGLARGGNYSLAQNTLDASVATAYRRYPNMEDADIRFILDIVEGYRRDLKVYNEHSRGHECGGCR*
Ga0075423_117958052	3300009162	Populus Rhizosphere	DLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0105249_107913662	3300009553	Switchgrass Rhizosphere	PVKVRLSYFDVKRKCTVEEVQELRLVPGESDRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0105249_115573882	3300009553	Switchgrass Rhizosphere	DSCELLADVEVKKNYTIAELADSLFQMAGLARGGNYPQALNALDASVATAYRRYPNMEDEDIRFILGIVEGYQRDLRVFNEQFRRRDCGGCR*
Ga0126305_101395053	3300010036	Serpentine Soil	YYDVKRKCLVEEVQEVRVIPAERDSCELLADMEVKKNYTIAELADSLFQMAGLARSGNYVQAKMELDTSVTSAYRRYPNMEDLDIKFILDIIEGYRRDLSVYNDLPRKHDCGGCR*
Ga0126377_107241792	3300010362	Tropical Forest Soil	SDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDTSVATAYRRYPNMEDEDIRFILGIVEGYQRDLRVYNGQNRRSDCGGCR*
Ga0126377_133502151	3300010362	Tropical Forest Soil	ELADSLYAMAGLARGGNYSQAQNVLDASVSTAYRRYPNMEDEDIRFILDIVEGYRRDLRVYNEQNRKHDCGSCR*
Ga0105239_123156102	3300010375	Corn Rhizosphere	DLLADVEVKKNYTIAELADSLFQMAGLARSGDYSQALNALDGAVATAYLRYPNMEDEDIRFILGIVEGYQRDLKVYNEQFHRRDCGSCR*
Ga0105239_129006232	3300010375	Corn Rhizosphere	YTIAELADSLFAMAGFARSGNYSQAQNVLDSSVTAAYQRYPHMEDEDIRFILNIVEGYQRDLKVYNAHYRKGECGGCR*
Ga0134127_102024751	3300010399	Terrestrial Soil	RFARRGNYSSALSVLDRSAASAYSRYPSMEDGDIRFILDIVEGYRRDLRVFTQHSRQSDCGGCRN*
Ga0134127_115705632	3300010399	Terrestrial Soil	SCDLLADVEVKKNFTIAELADSLFSMAGLAKSGQYLQAQNALEASVATAYRRYPNMEDQDIRFILDIVEGYRRDLKVYNQYSRKSECGGCR*
Ga0134127_123665091	3300010399	Terrestrial Soil	NFTIAELANSLYEMTEQARRGNYSLAQNTLDASISTAYRRYPNMEDEDIKFILGIVEGYQRDLRVYNGYNRRSDCGGCR*
Ga0134127_132268741	3300010399	Terrestrial Soil	SLFQMAGLARGGNYPQALNTLYASVATAYRRYPNMEDEDIRFILEIDEGYQRDLRVYNEQFRRHDCGGCR*
Ga0134122_115221942	3300010400	Terrestrial Soil	YFDVKRKCRVEEVQELRLVPSERDSCDLLADVEVKKNYTIAELADSLSDMRGLAVRGNYLQAQNALDGSIATAYRRYPNMEDADLRFILNIVEGYQRDLRAYNGYPRREECGGCR*
Ga0134121_119485291	3300010401	Terrestrial Soil	ELADSLFEMAGLARSGQYAQAQNVLDASVSTAYRRYPNMEDEDIRFIVDIVDGYRRDLRVYNEYSHKHDCGSCR*
Ga0134121_121528611	3300010401	Terrestrial Soil	VQELRLVPGESDRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0137443_12177171	3300011433	Soil	SDSCELLSDVEVKKNFTIAELADSLFEMSGFARRGNHSQAQNALEASVATAYRRYPNMEDQDIRFILDIVQGYQRDLKAYNEYYRKSNCGGCR*
Ga0164299_112884981	3300012958	Soil	LLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0164305_117403141	3300012989	Soil	KAQSFNTQLPVKVRLSYFDVKRKCTVEEVQELRLVPGESDRRDLLSDVELKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0157375_119942541	3300013308	Miscanthus Rhizosphere	ELRLVPGESDRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR*
Ga0157380_118864811	3300014326	Switchgrass Rhizosphere	QVVMAKFRTDSVGYTLPVKVRLTYFDVKRKCKVEEVQDLQLVPAERDTSDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDEDIRFILAIVEGYQRDLRVYNGQNRRSDCGGCR*
Ga0182007_101433281	3300015262	Rhizosphere	FRTDLVGYELPVKVRLTYYDVKRRCRVEEVQEVRLMSTESESCDLLADVEVKKNYTIAELADSLFQMAGLARNGDYSQALNALDGAVATAYLRYPNMEDEDIRFILGIVEGYQRDLKVYNEQFHRRDCGSCR*
Ga0190265_100210926	3300018422	Soil	VKVRLSYFDVKRNCMVEEVQDLRLVPAESDSCDLLMDVEVKKNYTIAELADSLFAMTGLARRGNYSQAQNTLDASVATAYRRYPNMEDPDIKFILSIVEGYQRDLKTFNGYSRKTDCVRC
Ga0193708_10914611	3300021408	Soil	LPGEADSCDILADVEVKKNYTIAELAQSLFDMREAANRRNFAQAEGLLNSSVSTAYGRYPNMEDGDIRFILNIVEGYQRDLRTFNGSNPGPDCGGGCR
Ga0247681_10488811	3300024310	Soil	VKVRLSYFDVKRKCIVEDVQSLSLVPAERDICDLLADVEVKKNFTIAELAQSLYDMTESAKRRDFTAAGNLLNASIASAYRRYPNMEDTDIRFILNIVEEYDRDLKTFNGYNRNDGCNSGCR
Ga0207680_108666401	3300025903	Switchgrass Rhizosphere	QDLQLIPAERDASDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDQDIRFILEIVEGYQRDLRVYNQQNRRHDCGGCR
Ga0207660_103669101	3300025917	Corn Rhizosphere	IAQLADSLFEMTGLARRGNYTQALNTLDTSVTSAYRRYPNMEDTDIRFILDIVEGYRRDLRVFNQQSRHSDCGGCR
Ga0207662_109505241	3300025918	Switchgrass Rhizosphere	RLTYYDVKRRCRVEEVQEVRLMSTESESCDLLADVEVKKNYTIAELADSLFQMAGLARNGDYSQALNALDGAVATACRRYPNMEDEDIRFILGIVEGYQRDLKVYNEQFHRRDCGGCR
Ga0207646_101825363	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VKRKCAVEEVQELRLAPAESDSCDVLADVEVKKNYTIAELADSLYAMAGLARGGNYSQAQNVLDASVSTAYRRYPNMEDTDIRFILDIVEGYRRDLKVYNEYSRKHDCGSCR
Ga0207694_104436911	3300025924	Corn Rhizosphere	EKDSCDVLADVEVKKNYTIAELADSLYAMAGLARGGNYSQAQNVLDASVSTAYRRYPNMEDEDIRFILDIVEGYRRDLRVYNEQNRRHDCGSCR
Ga0207650_100464781	3300025925	Switchgrass Rhizosphere	IAELANSLYEMTSFARRGNFSLAQNTLDASISTAYQRYPNMEDEDIKFILGIVEGYQRDLKVYNGYNRRSDCGGCR
Ga0207659_115898241	3300025926	Miscanthus Rhizosphere	LSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR
Ga0207659_119118242	3300025926	Miscanthus Rhizosphere	ADVEVKKNYTIAELADSLFAMAGLARSGNYSQALNTLNASVATAYRRYPNMEDEDIRFILGIVEGYQRDLRVYCR
Ga0207690_118621711	3300025932	Corn Rhizosphere	VEVKKNFTIAQLADSLFEMTAFARRGNYSQALNAVETSVATAYRRYPNMEDKDIRFILDIVEGYRRDLKVYNDYSRPKSDCARCWRTSPT
Ga0207711_103965181	3300025941	Switchgrass Rhizosphere	RIAGKSVLPVKVHLSYFDLKRNCMVNEMQELRLAPADGESCDLLADVEVKKNYTIAELADSLFQMTGLARSGNYAQAQNALDASVATAYRRYPNMEDQDIKFILDIVEGYRRDLRVFTGYSRQSDCGGCRK
Ga0207712_115334991	3300025961	Switchgrass Rhizosphere	LADVEVKKNYTIAELADSLFQMAGLARGGNYPQALNALDASVATAYRRYPNMEDEDIRFILGIVEGYQRDLRVFNEQFRRRDCGGCR
Ga0207703_119840392	3300026035	Switchgrass Rhizosphere	VKVLLSYYDVKRKCTVQEVQELRLVPAESDSCELLADVEVKKNYTIAELADSLFQMAGLARSGQYAQAQNVLDASVSTAYRRYPNMEDEDIRFIIDIVDGYRRDLRVYNEFSHKHDCGSC
Ga0207708_100834405	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	ELRLEPAERDSCELLADVEVKKNYTIAELADSLFAMAGLARSGNYPQAQQVLDTSVNAAYQRYPHMEDEDIRFILDIVEGYRRDLKVYNAHYRKGECGGCR
Ga0207708_117399191	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	YDVRRKCMVDEVQDARLVPAENESCELLTDVEVKKNYTIAQLADSLFEMTGFARRGNYSQALNALDASVATAYNRYPNMEDNDIRFILDIVEGYRRDLKVYNDYSRPKSDCGGCR
Ga0207641_110828582	3300026088	Switchgrass Rhizosphere	VQEVRLMSTESESCDLLADVEVKKNYTIAELADSLFQMAGLARSGDYSQALNALNGSVATAYRRYPNMEDEDIRFILGIVEGYQRDLKVYNEQFHRRDCGSCR
Ga0207676_123174632	3300026095	Switchgrass Rhizosphere	FDVKRKCTVEEVQELRLVPGESDRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQRDLKTYNGYQRKSDCGGCR
Ga0207675_1001321681	3300026118	Switchgrass Rhizosphere	QLVPAGRDTSDLLADVEVKKNYTIAELADSLFAMTGLARSGNYSQALNTLDASVATAYRRYPNMEDEDIRFILEIVEGYQRDLRVYNGQNRRDCGGCR
Ga0207698_108647112	3300026142	Corn Rhizosphere	VQDLQLVPAERGTSDLLADVEVKKNYTIAELADSLFAMAGLARSGNYSQALNTLNASVATAYRRYPNMEDEDIRFILGIVEGYQRDLRVYCR
Ga0209486_100533911	3300027886	Agricultural Soil	TIAELADSLFEMTGLARRGSYSQAQSVLDASVATAYRRYPNMEDEDIRFILGIVEGYRRDLKVYNEHSRKFDCGNCR
Ga0209382_109291451	3300027909	Populus Rhizosphere	RKCMVEEVQELRLEPAESESCDVLADVEVKKNFTIAELADSLFSMAGLARGGQYLQAQNTLDASVATAYRRYPNMEDQDIRFILDIVEGYRRDLKVYNEHSRRSECGGCR
Ga0209382_111317751	3300027909	Populus Rhizosphere	PRPPVKVRLSYFDVKRKCVVEEVQELRLVPSERDSCDSLVDLEVKKNYTIAELADSLFQMTGFARGGNYSQAQNVLDASLASAHTRYPYMEDEDIRFILDIVEGYRRDLQMYNGHRRIGDCVGCR
Ga0268264_119571541	3300028381	Switchgrass Rhizosphere	KNYTIAELADSLYAMAGLARSGNYSQAQNVLDASVSTAYRRYPNMEDEDIRFILDIVEGYRRDLRVYNEQNRRHDCGSCR
Ga0310813_115839831	3300031716	Soil	KCPVEEVQELRLVPSENESCELLADVEVKKNYTIAELADSLFRMANLARSGNYTLAQSVLDVSVSTAYRRYPNMEDEDIRFIIDIVEGYRRDLRVYNEYSRKHDCGSCR
Ga0307468_1020812331	3300031740	Hardwood Forest Soil	LTQVIMAKFKAQSFNTQLPVKVRLSYFDVKRKCTVEEVQELRLVPAESDRRDLLSDVEVKKNYTIAELADSLFDMKGLAVRGSYLQAQNALDASIATAYRRYPNMEDADVKFILNIVEGYQKDLKTYNGYQRKSDCGGCR
Ga0307406_120975371	3300031901	Rhizosphere	LTDVEVKKNYTIAELADSLFQMTGLARSGNYAQALNALDGGVGTAYRRYPNMEDQDIKFILDIVEGYRRDLRVHTAQSHRPDCGGCR
Ga0307411_119623601	3300032005	Rhizosphere	PAEGESCDPLVDLEVKKNHTIAELADSLFQMTGLARAGNYSQAQSVLDASVATAHTRYPYMEDEDIRFIFDIVEGYRRDLQVYNQHSRRNECGSCR
Ga0310810_102654061	3300033412	Soil	ADVEVKKNYTIAELADSLFRMANLARSGNYTLAQSVLDVSVSTAYRRYPNMEDEDIRFIIDIVEGYRRDLRVYNEYSRKHDCGSCR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064066

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences