Metagenome Family F064024

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064024
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	88 residues
Representative Sequence	MAREGYTFVLDRANVEKLKTLPDFEGREEPALAEDFLRFRVETWAENLGDAGAAPGEVSVSVDPHQRKAHLFRGATKLFSADI
Number of Associated Samples	82
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	29.37 %
% of genes near scaffold ends (potentially truncated)	31.78 %
% of genes from short scaffolds (< 2000 bps)	82.17 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.519 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (21.705 % of family members)
Environment Ontology (ENVO)	Unclassified (27.907 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.062 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.93% β-sheet: 24.32% Coil/Unstructured: 47.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
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SCOP family	SCOP domain	Representative PDB	TM-score
f.51.1.1: Rhomboid-like	d2nr9a1	2nr9	0.5442
d.294.1.1: Eukaryotic EndoU ribonuclease	d2c1wa1	2c1w	0.51615
d.17.2.1: Amine oxidase N-terminal region	d1w7ca3	1w7c	0.51319
b.67.2.3: Glycosyl hydrolases family 32 N-terminal domain	d1y4wa2	1y4w	0.51302
d.252.1.1: CheC-like	d1xkra_	1xkr	0.5118

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00441	Acyl-CoA_dh_1	13.95
PF13458	Peripla_BP_6	9.30
PF02771	Acyl-CoA_dh_N	3.10
PF02770	Acyl-CoA_dh_M	3.10
PF07992	Pyr_redox_2	0.78
PF03379	CcmB	0.78
PF05592	Bac_rhamnosid	0.78
PF03100	CcmE	0.78
PF06283	ThuA	0.78
PF13520	AA_permease_2	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	20.16
COG2332	Cytochrome c biogenesis protein CcmE	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG2386	ABC-type transport system involved in cytochrome c biogenesis, permease component	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG3408	Glycogen debranching enzyme (alpha-1,6-glucosidase)	Carbohydrate transport and metabolism [G]	0.78
COG4813	Trehalose utilization protein	Carbohydrate transport and metabolism [G]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.52 %
Unclassified	root	N/A	22.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.52 %
Unclassified	root	N/A	22.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.52 %
Unclassified	root	N/A	22.48 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	54.26 %
Unclassified	root	N/A	22.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.55 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	54.26 %
Unclassified	root	N/A	22.48 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.26 %
Unclassified	root	N/A	22.48 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.78 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.26 %
Unclassified	root	N/A	22.48 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.78 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.78 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.26 %
Unclassified	root	N/A	22.48 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	0.78 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.78 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.26 %
Unclassified	root	N/A	22.48 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.78 %
unclassified Verrucomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae	0.78 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.26 %
Unclassified	root	N/A	22.48 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	0.78 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.78 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090004\|P1_DRAFT_NODE_310178_len_2353_cov_12_386741	All Organisms → cellular organisms → Bacteria	2403	Open in IMG/M
2124908032\|Perma_A_C_ConsensusfromContig184580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300001145\|JGI12682J13319_1006139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1012	Open in IMG/M
3300004479\|Ga0062595_101716349	Not Available	592	Open in IMG/M
3300004633\|Ga0066395_10103371	All Organisms → cellular organisms → Bacteria → Proteobacteria	1377	Open in IMG/M
3300005181\|Ga0066678_10419542	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300005293\|Ga0065715_11144438	Not Available	510	Open in IMG/M
3300005332\|Ga0066388_100126799	All Organisms → cellular organisms → Bacteria	3089	Open in IMG/M
3300005332\|Ga0066388_100181473	All Organisms → cellular organisms → Bacteria	2713	Open in IMG/M
3300005332\|Ga0066388_100196751	All Organisms → cellular organisms → Bacteria	2634	Open in IMG/M
3300005332\|Ga0066388_101758796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1100	Open in IMG/M
3300005332\|Ga0066388_106129395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300005434\|Ga0070709_11010169	Not Available	662	Open in IMG/M
3300005440\|Ga0070705_101188914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300005445\|Ga0070708_100007678	All Organisms → cellular organisms → Bacteria → Proteobacteria	8643	Open in IMG/M
3300005445\|Ga0070708_100069156	All Organisms → cellular organisms → Bacteria	3175	Open in IMG/M
3300005445\|Ga0070708_100935125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300005445\|Ga0070708_101144297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300005445\|Ga0070708_101476290	Not Available	634	Open in IMG/M
3300005451\|Ga0066681_10406214	Not Available	837	Open in IMG/M
3300005451\|Ga0066681_10992194	Not Available	501	Open in IMG/M
3300005467\|Ga0070706_100089588	All Organisms → cellular organisms → Bacteria	2853	Open in IMG/M
3300005468\|Ga0070707_100005868	All Organisms → cellular organisms → Bacteria	11451	Open in IMG/M
3300005468\|Ga0070707_100706631	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300005468\|Ga0070707_101277156	Not Available	700	Open in IMG/M
3300005468\|Ga0070707_101287361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300005471\|Ga0070698_100000104	All Organisms → cellular organisms → Bacteria	69755	Open in IMG/M
3300005471\|Ga0070698_101489195	Not Available	628	Open in IMG/M
3300005518\|Ga0070699_100054719	All Organisms → cellular organisms → Bacteria	3455	Open in IMG/M
3300005536\|Ga0070697_100270003	Not Available	1458	Open in IMG/M
3300005536\|Ga0070697_100615527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M
3300005546\|Ga0070696_100168236	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300005547\|Ga0070693_100464188	Not Available	891	Open in IMG/M
3300005552\|Ga0066701_10933410	Not Available	514	Open in IMG/M
3300005556\|Ga0066707_10814959	Not Available	576	Open in IMG/M
3300005764\|Ga0066903_100152193	All Organisms → cellular organisms → Bacteria	3327	Open in IMG/M
3300005764\|Ga0066903_105662102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300005947\|Ga0066794_10050917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1227	Open in IMG/M
3300006028\|Ga0070717_11442173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300006173\|Ga0070716_100181785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1381	Open in IMG/M
3300006173\|Ga0070716_101203932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300006854\|Ga0075425_100343812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1718	Open in IMG/M
3300006854\|Ga0075425_102511421	Not Available	570	Open in IMG/M
3300006864\|Ga0066797_1189568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300009012\|Ga0066710_100473486	All Organisms → cellular organisms → Bacteria	1882	Open in IMG/M
3300009012\|Ga0066710_100604700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1664	Open in IMG/M
3300009012\|Ga0066710_100785503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1458	Open in IMG/M
3300009038\|Ga0099829_10538353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300009038\|Ga0099829_10615247	Not Available	903	Open in IMG/M
3300009088\|Ga0099830_10376535	Not Available	1145	Open in IMG/M
3300009093\|Ga0105240_11372883	Not Available	743	Open in IMG/M
3300009137\|Ga0066709_102060429	Not Available	789	Open in IMG/M
3300009792\|Ga0126374_10694567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300010046\|Ga0126384_10466484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1081	Open in IMG/M
3300010046\|Ga0126384_10833097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300010358\|Ga0126370_10201914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1502	Open in IMG/M
3300010358\|Ga0126370_10449354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1074	Open in IMG/M
3300010358\|Ga0126370_11459851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300010359\|Ga0126376_10825122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908	Open in IMG/M
3300010359\|Ga0126376_11771087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300010361\|Ga0126378_10425703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1441	Open in IMG/M
3300010361\|Ga0126378_11895531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300010361\|Ga0126378_12879179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300010362\|Ga0126377_12152356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300010366\|Ga0126379_10633984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1157	Open in IMG/M
3300010397\|Ga0134124_12259135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300010398\|Ga0126383_13431363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300010400\|Ga0134122_11228851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300011270\|Ga0137391_10758061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300011271\|Ga0137393_11020551	Not Available	704	Open in IMG/M
3300011271\|Ga0137393_11296287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300012201\|Ga0137365_10216427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1430	Open in IMG/M
3300012204\|Ga0137374_10070453	All Organisms → cellular organisms → Bacteria	3448	Open in IMG/M
3300012204\|Ga0137374_11054162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300012206\|Ga0137380_11176148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300012207\|Ga0137381_10243537	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1562	Open in IMG/M
3300012209\|Ga0137379_10379960	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300012210\|Ga0137378_10332750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1412	Open in IMG/M
3300012210\|Ga0137378_10732912	Not Available	900	Open in IMG/M
3300012353\|Ga0137367_10254665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1262	Open in IMG/M
3300012353\|Ga0137367_11115260	Not Available	532	Open in IMG/M
3300012354\|Ga0137366_10289716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1207	Open in IMG/M
3300012355\|Ga0137369_10102435	All Organisms → cellular organisms → Bacteria	2347	Open in IMG/M
3300012355\|Ga0137369_10430903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300012356\|Ga0137371_10871154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300012360\|Ga0137375_10083247	All Organisms → cellular organisms → Bacteria	3329	Open in IMG/M
3300012360\|Ga0137375_10110720	All Organisms → cellular organisms → Bacteria	2769	Open in IMG/M
3300012360\|Ga0137375_10982935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300012363\|Ga0137390_10341660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1478	Open in IMG/M
3300012532\|Ga0137373_10875334	Not Available	660	Open in IMG/M
3300012684\|Ga0136614_10951038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300012931\|Ga0153915_10003482	All Organisms → cellular organisms → Bacteria	14450	Open in IMG/M
3300015371\|Ga0132258_13133214	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300015374\|Ga0132255_100918154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1310	Open in IMG/M
3300017927\|Ga0187824_10064446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1144	Open in IMG/M
3300017930\|Ga0187825_10025666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1984	Open in IMG/M
3300019888\|Ga0193751_1088396	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1219	Open in IMG/M
3300021432\|Ga0210384_10335224	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300021560\|Ga0126371_10211422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2039	Open in IMG/M
3300021560\|Ga0126371_12646499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300025885\|Ga0207653_10238389	Not Available	694	Open in IMG/M
3300025910\|Ga0207684_10137932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2095	Open in IMG/M
3300025910\|Ga0207684_10314259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1350	Open in IMG/M
3300025922\|Ga0207646_10799615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300025922\|Ga0207646_11116760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300026326\|Ga0209801_1135737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1047	Open in IMG/M
3300027667\|Ga0209009_1000200	All Organisms → cellular organisms → Bacteria	24371	Open in IMG/M
3300027882\|Ga0209590_10860270	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300028792\|Ga0307504_10145401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300028803\|Ga0307281_10220620	Not Available	689	Open in IMG/M
3300031720\|Ga0307469_10031639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3080	Open in IMG/M
3300031720\|Ga0307469_10222905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1493	Open in IMG/M
3300031720\|Ga0307469_10369557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1212	Open in IMG/M
3300031720\|Ga0307469_10530978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1038	Open in IMG/M
3300031720\|Ga0307469_10730463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300031720\|Ga0307469_11229917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300031720\|Ga0307469_11840107	Not Available	585	Open in IMG/M
3300031740\|Ga0307468_100578883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300031820\|Ga0307473_10745044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300031820\|Ga0307473_11421004	Not Available	523	Open in IMG/M
3300032001\|Ga0306922_12198938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300032180\|Ga0307471_101050128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	981	Open in IMG/M
3300032180\|Ga0307471_102168908	Not Available	699	Open in IMG/M
3300033433\|Ga0326726_10924846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300033433\|Ga0326726_11466509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300034090\|Ga0326723_0150858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1021	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.35%
Host-Associated	Host-Associated	4.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.25%
Plants	Host-Associated → Plants	4.65%
Aquatic	Environmental → Aquatic	3.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.92%
Freshwater	Environmental → Aquatic → Freshwater	3.10%
Peat	Environmental → Terrestrial → Peat	2.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.33%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.91%
Loam	Environmental → Terrestrial → Soil → Loam	29.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.55%
Ice	Environmental → Aquatic → Freshwater → Ice	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	21.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.33%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.55%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.55%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	21.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.40%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	9.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.33%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.55%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.78%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090004	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
3300001145	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P1_DRAFT_00750190	2088090004	Soil	MSPRTGDRTYRMTKEGYTFVLDGENVDRLKTLADFEAKEEPALAEDFLKFRVEAWAENLADAGAAPGDVFVSVDPHQRKTHLVRGATKLFSADI
Perma_A_C_02354120	2124908032	Soil	MSPRTGDRTYRMTKEGYTFVLDGENVDRLKTLADFEAKEEPALAEDFLKFRVEAWAENLADAGAAPGDVFVSVDPHQRKTH
JGI12682J13319_10061392	3300001145	Forest Soil	MTKEGYTFVLDGENVDRLKTLADFEAKEEPALAEDFLKFHVEAWAENLADAGAASGDVFVSVDPHQRKTHLVRGATKLFSADI*
Ga0062595_1017163491	3300004479	Soil	MTREGYTFVLDGENVDRLKTLADFEGKEEPALAEDFLRFRVEAWAENLADAGAAPGDVFVSVDPHQRKTHLVRASETLFSADI*
Ga0066395_101033711	3300004633	Tropical Forest Soil	SYRRQRDGYMFVLDRVDVDRLKGMPEFEGREEPAVAEDFLRFRVEAWAENLADAGAGPGQIGVRVDPHQRKAHLERDAAVLFSADI*
Ga0066678_104195421	3300005181	Soil	FALDSSNVAKLKALSDFEGKEEPALAEDFLRFRVEAWAENLTDAGARPGDVSVSVDPHQRKAHLIRGATTLFSADI*
Ga0065715_111444381	3300005293	Miscanthus Rhizosphere	MIREGYTFVLDGENVDRLKTLADFEAKEEPALAEDFLRFRVEAWAENLADAGAAPGDVFVSVDLHQRKTHLVRASETLFSADI*
Ga0066388_1001267992	3300005332	Tropical Forest Soil	MFVLDRGNVDRLRAIADFEGREEPAVAEDFLRFRVEGWAENLADAGAAPGEVAVELDSHARKAHLVRGSERLFSADI*
Ga0066388_1001814733	3300005332	Tropical Forest Soil	MYRRERDGYHFVLDRGNVEKLKAMPDFEGREEPAVAEDFLRFRIEAWAENLADAGAKPGDVAVAIDPHQRKAHLSRGSSLLFSADI*
Ga0066388_1001967513	3300005332	Tropical Forest Soil	MTREGYTFSIDGENVDRLKSLPDFETKEEPALAEDFLRFRVEGWAENLADAGASPGDVAVSVDPHQRKAHLNRGPVKLFSADI*
Ga0066388_1017587962	3300005332	Tropical Forest Soil	MTRPPSYRRQQEGYTFVLDRTNVDRLKGMPEFEGREEPAVAEDFLRFRVEAWAENLADAGAGPGQIGVRIDPHQRKAHLEREASLLFSADI*
Ga0066388_1061293952	3300005332	Tropical Forest Soil	MAKELPKLYRREKEGYHFLLDRGNVDKLKAMPDFEGREEPAVAEDFLRFRIEAWADNLADAGAKPGDVNVAIDPHQRKAHLSRGASVLFSADI*
Ga0070709_110101691	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LRREGYTFVLDGENVDRLKTLADFETKEEPALAEDFLRFRVEAWAENLADAGAAPGDVTVSVDPHQRKTHLVRSSETLFSADI*
Ga0070705_1011889142	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTREGYTFVLDGENVDRLKTLADFEAEEEPALAEDFLRFRVEAWAENLADAGAVPGDVFVSVDPHQRKTHLVRSSETLFSADI*
Ga0070708_1000076783	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTREGYTFVLDGENVDRLKTLADFETEEEPALAEDFLRFRVEVWAENLADAGAEPGDVLVLVDPHQRKTHLVRSTETLFSADI*
Ga0070708_1000691565	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GNIDRLKAIAEFEGREEPALAEDFLRFRVEEWAENLADAGASPGEIAVELDSHARKAHLVRGAARLFSADI*
Ga0070708_1009351251	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	ANVQKLKALPDFELKEEPALAEDFLRFRVEAWAENLADAGAHPGDVSVSIDPHQRKAHLARGAMVLFSADI*
Ga0070708_1011442972	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTQNPGSYQREKDGYTFVLDRPNVERLKAIPEFEGREEPAVADEFLRYRVETWAENLADAGADRGEIAVQLDPHQRKAHLSRASSILFSADI*
Ga0070708_1014762901	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTREGYTFVLDGENVDRLKSLADFEAEEEPALAENFLRFRVEGWAENLADSGAPPGDVTVSVDPHQRKTHLLRGEMKLFSADI*
Ga0066681_104062142	3300005451	Soil	MTREGYTFVLDGENVDRLKTLADFEGKEEPALAEDFLRFRVEAWAENLADAGAVPGDVFVSVDPHQRKTHLVRASETLFSADI*
Ga0066681_109921942	3300005451	Soil	MNPRPGGGKTYRMEREGYLFALDSSNVAKLKALSDFEGKEEPALAEDFLRFRVEAWAENLTDAGARPGDVSVSVDPHQRKAHLIRGATTLFSADI*
Ga0070706_1000895882	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MDREGYTFALDPANVQKLKALPDFELKEEPALAEDFLRFRVEAWAENLADAGAHPGDVSVSIDPHQRKAHLARGAMVLFSADI*
Ga0070707_1000058685	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MLDRPGSYRREKDGYTFVLDRGNIDRLKAIAEFEGREEPALAEDFLRFRVEEWAENLADAGASPGEIAVELDSHARKAHLVRGAARLFSADI*
Ga0070707_1007066311	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	PANVQKLKALPDFELKEGPALAEDFLRFRVEAWAENLADAGAHPGDVSVSIDPHQRKAHLARGAMVLFSADI*
Ga0070707_1012771562	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSYRREKDGYTFVLDRGNIDRLRAIAEFEGREEPALVEDFLRFRVEGWAENLADAGASPGEVAVELDSHQRKAHLVRGSS
Ga0070707_1012873611	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LKFLPVTDTSRAAGPYRMAREGYTFLLDRANVEKLKSLPDFEGREEPALAEDFLRFRAETWAENLADAGAAPGEVSVSVDPHQRRAHLSRGAVKLFSAPL*
Ga0070698_10000010443	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSYRREKDGYTFVLDRGNIDRLRAIAEFEGREEPALVEDFLRFRVEGWAENLADAGASPGEVAVELDSHQRKAHLVRGSSRLFSADI*
Ga0070698_1014891951	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTMNRPVSYRREKDGYTFVLDRGNVDRLRAIAEFEGREEPALAEDFLRFRVEAWAENLADVGVSPGEVGVELDSHQRKAHLVRGSARLFSADI*
Ga0070699_1000547191	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	KFLPVTDTSRAAGPYRMAREGYTFLLDRANVEKLKSLPDFEGREEPALAEDFLRFRAETWAENLADAGAAPGEVSVSVDPHQRRAHLSRGAVKLFSAPL*
Ga0070697_1002700033	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MNPQAGDRTYRMKKEGYTFVLDGENVDRLKTLADFESREEPALADDFLKFRVETWAENLADARAAPGDVFVSVDPHQRKTHLVRGATKLFSADI*
Ga0070697_1006155272	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AMTMNRPMSYRREKDGYTFVLDRGNIDRLRAIAEFEGREEPALVEDFLRFRVEGWAENLADAGASPGEVAVELDSHQRKAHLVRGSSRLFSADI*
Ga0070696_1001682363	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	IRIPSVMTDTLDSYRRERDGYTFVLDRGNVEKLKAIPDFEGREEPAVADEFLRFRVELWAENLTDAGAEPGEISVQLDPHQRKAHLTRASSILFSADF*
Ga0070696_1007181902	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	GGRPGGSFGRVGSSPRQNTRTGLKFPVVADTPGRAASYRREQEGYVFLLDRSNVERLKVLPDFESREEPALPEDFLRFRVEAWAENLTDAGAAPGEVAVRVDPHQRKAHLMRGSELLFSADI*
Ga0070693_1004641882	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MIREGYTFVLDGENVDRLKTLADFEAKEEPALAEDFLRFRVEAWAENLADAGAVPGDVTVSVDPHQRKTHLERSSETLFSADI*
Ga0066701_109334102	3300005552	Soil	VSPRTGETTYRMTWEGYTFVLDGENVDRLKTLADFEAEEEPALAEDFLRFRVEAWAENLADAGAVPGDVFVSVDPHQRKTHLVRSSETLFSADI*
Ga0066707_108149592	3300005556	Soil	MTEVPRPLAYRMERDGYSFVLDRAELDKLKSLSDFESREEPALPEDFLRFRVEGWAENLTDAGAARGEISVRVDPHQRKAHLLRGEAVLFSADI*
Ga0066903_1001521931	3300005764	Tropical Forest Soil	MRANRLLDPCMDAENRRPAHKIPSMMTRPPSYRRQRDGYMFVLDRVDVDRLKGMPEFEGREEPAVAEDFLRFRVEAWAENLADAGAGPGQIGVRVDPHQRKAHLERDTAVLFSADI*
Ga0066903_1056621022	3300005764	Tropical Forest Soil	GYTFALDSANVQKLKALPDFELKEEPALAEDFLRFRVEAWAENLADAGARPGDVSVAVDPHQRKAHLGRGPLVLFSADI*
Ga0066794_100509173	3300005947	Soil	MTREGYTFVLDGENVDRLKTLADFEAREEPALAEDFLRFRIDTWAENLADAGAAPGEVFVSVDPHQRKTHLLRGGMTLFSADI*
Ga0070717_114421732	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	AKIPAMTMNRPMSYRREKDGYTFVLDRGNIDRLRAIAEFEGREEPALVEDFLRFRVEGWAENLADAGASPGEVAVELDSHQRKAHLVRGSSRLFSADI*
Ga0070716_1001817852	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MEPRPTGGKTYRMEKEGYTFALDSSNVAKLKALSDFEGKEEPALAEDFLRFHVETWAENLTDAGARPGDVSVAVDLHQRKAHLTRGATTLFSADI*
Ga0070716_1012039322	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	DGYTFVLDHRNVEKLKAMPDFEGREEPAVAEDFLRFRIEAWAENLTDALAKPGDVVVAIDPHQRKAHLSRGSVVLFSADI*
Ga0075425_1003438123	3300006854	Populus Rhizosphere	MAIKFPSMSRERPAEYRREEDGYTFVLDRVNVDKLKAMPDFEGREEPAVAEDFLRFRVEPWAESLASAGARQGQIAVAIDPHQRKAHLSRDKVLLFSADI*
Ga0075425_1025114212	3300006854	Populus Rhizosphere	MTREGYTFVLDGENVDRLKTLADFEAKEEPALAEDFLRFRVEAWAENLADAGAVPGDVFVWVDPHQRKTHLVRSSETLFSADI*
Ga0066797_11895682	3300006864	Soil	MTREGYTFVLDGENVDRLKTLADFEAREEPALAEDFLRFRIDTWAENLADAGAAPGEVFVSVDPHQRKTHLLRGGMTLF
Ga0066710_1004734861	3300009012	Grasslands Soil	MTEVPRPLAYRMERDGYSFVLDRAELDKLKSLSDFESREEPALPEDFLRFRVEGWAENLTDAGAARGEISVRVDPHQRKAHLLRGEAVLFSADI
Ga0066710_1006047002	3300009012	Grasslands Soil	MERDGYSFVLDRAEVERLKSLSDFESREEPALPEDFLRFRVEGWAENLADAGAARGEISVRVDPHQRKAHLLRGASVLFSADI
Ga0066710_1007855033	3300009012	Grasslands Soil	MEREGYLFALDSSNVAKLKALSDFEGKEEPALAEDFLRFRVEAWAENLTDAGARPGDVSVSVDPHQRKAHLIRGATTLFSADI
Ga0099829_105383532	3300009038	Vadose Zone Soil	MERDGYSFVLDRAEMEKLKSLSDFESREEPALPEDFLRFRVEAWAENLSDAGAARGEISVRVDPHQRKAHLLRGGLVLFSADI*
Ga0099829_106152472	3300009038	Vadose Zone Soil	MSYRREKDGYTFVLDRGNVDRLRAIAEFEGREEPALVEDFLRFRVEGWAENLADVGASPGEVAVELDSHQRKAHLVRGSSRLFSADI*
Ga0099830_103765351	3300009088	Vadose Zone Soil	MERDGYSFVLDRAEVEKLKSLSDFESREEPALPEDFLRFRVEAWAENLADAGAARGEISVRVDPHQRKAHLLRGGLVLFSADI*
Ga0105240_113728832	3300009093	Corn Rhizosphere	MIREGYSFVLDGENVDRLKTLADFEAKEEPALAEDFLRFRVEAWAENLADAGAAPGDVFVSVDPHQRKTHLVRASETLFSADI*
Ga0066709_1020604291	3300009137	Grasslands Soil	LDGANVDRLKTLADFEAKEEPALAEDFLRFRVEAWAENLADAGAVPGDVVVSVDPHQRKTHLVRSSETLFSADI*
Ga0126374_106945672	3300009792	Tropical Forest Soil	MVDRPPNYRREKDGYMFVLDRGNVDRLRAIADFEGREEPAVAEDFLRFRVEGWAENLADAGAAPGEVAVELDSHARKAHLVRGSERLFSADI*
Ga0126384_104664842	3300010046	Tropical Forest Soil	MAKELPKMYRRERDGYHFVLDRGNVEKLKAMPDFEGREEPAVAEDFLRFRIEAWAENLADAGAKPGDVAVAIDPHQRKAHLSRGSSLLFSADI*
Ga0126384_108330972	3300010046	Tropical Forest Soil	IPAIMVDRPPSYRREKDGYMFVLDRGNVDRLRAIADFEGREEPAVAEDFLRFRVEGWAENLADAGAAPGEVAVELDSHARKAHLVRGSERLFSADI*
Ga0126370_102019143	3300010358	Tropical Forest Soil	REGYTFSIDGENVDRLKSLPDFETKEEPALAEDFLRFRVEGWAENLADAGASPGDVAVSVDPHQRKAHLNRGPVKLFSADI*
Ga0126370_104493541	3300010358	Tropical Forest Soil	MAKELPKMYRRERDGYHFVLDRGNVEKLKAMPDFEGREEPAVAEDFLRFRIEAWAENLADAGAKPGDVAVAIDPHQRKAHLSRGSSLLFSAD
Ga0126370_114598512	3300010358	Tropical Forest Soil	MSKDGYSFELDSANVEKLQSFPDFEGKREPALAEDFLRFRVEGWAENLADAGVAPGEVSVAVDPHQRKAHLTRDEAILFSADI*
Ga0126376_108251222	3300010359	Tropical Forest Soil	MSAARRTYSMSREGYTFSLDSRNVDRLKALPDFEGKEEPALAEDFLRFRVESWAENLNDAGDAKGEVSVSVDPHQRKAHLTRGEAKLFSADI*
Ga0126376_117710872	3300010359	Tropical Forest Soil	MAIKFPAMPKDRPAEYRREKDGYTFILDRVNVDKLKAMPDFEGREEPAVAEDFLRFRIESWAESLASAGAREGPIGVAIDSHQRKAHLSRDKTLLFSADI*
Ga0126378_104257032	3300010361	Tropical Forest Soil	MAKELPEMYRRERDGYQFVLDRGNVEKLKAMPDFEGREEPAVAEDFLRFRIEAWAENLADAGAKPGDVAVAIDPHQRKAHLSRGSSLLFSADI*
Ga0126378_118955312	3300010361	Tropical Forest Soil	ESLPQRNRRFELKFQLMAKELPKLYRREKEGYHFLLDRGNVDKLKAMPDFEGREEPAVAEDFLRFRIEAWADNLADAGAKPGDVNVAIDPHQRKAHLSRGASVLFSADI*
Ga0126378_128791792	3300010361	Tropical Forest Soil	MTRPPSYRRQQEGYTFVLDRTNVDRLKGMPEFEGREEPAVAEDFLRFRVEAWAENLADAGAGPGQIGVRIDPHQRK
Ga0126377_121523562	3300010362	Tropical Forest Soil	MSPHGARNYLMGKEGYRFSLDGANVEKLKSVPDFEGKEEPALAEDFLRFRVERWAENLADAGVAPGEISVSVDPHQRKAHLIRAGAKLFSADI*
Ga0126379_106339842	3300010366	Tropical Forest Soil	MDAENRRPAHKIPSMMTRPPSYRRQRDGYMFVLDRVDVDRLKGMPEFEGREEPAVAEDFLRFRVEAWAENLADAGAGPGQIGVRVDPHQRKAHLERDTAVLFSADI*
Ga0134124_122591351	3300010397	Terrestrial Soil	VSQRTDPTRTYRMIREGYTFVLDGENVDRLKTLADFEAKEEPALAEDFLRFRVEAWAENLADAGAAPGDVFVSVDPHQRKTHLVRASETLFSADI*
Ga0126383_134313632	3300010398	Tropical Forest Soil	MARELPKVYRREKEGYHFLLDRGNVDKLKAMPDFEGREEPAVAEDFLRFRIEAWADNLADAGAKPGDVTVAIDPHQRKAHLSRG
Ga0134122_112288512	3300010400	Terrestrial Soil	VADTPGRAASYRREQEGYVFLLDRSNVERLKVLPDFESREEPALPEDFLRFRVEAWAENLTDAGAAPGEVAVRVDPHQRKAHLMRGSELLFSADI*
Ga0137391_107580612	3300011270	Vadose Zone Soil	MERDGYSFVLDRAEVEKLKSLSDFESREEPALPEDFLRFRVEAWAENLSDAGAARGEISVRVDPHQRKAHLLRGGLVLFSADI*
Ga0137393_110205512	3300011271	Vadose Zone Soil	MVDRPGSYRREKDGYTFVLDRGNIDRLKAIAAFERREEPALAEDFLRFRVEEWAENLADAGASPGEIAVELDSHARKAHLVRGAARLFSADI*
Ga0137393_112962871	3300011271	Vadose Zone Soil	PAMTMNRPMSYRREKDGYTFVLDRGNIDRLRAIAEFEGREEPALVEDFLRFRVEGWAENLADAGASPGEVGVELDSHQRKAHLVRGSSRLFSADI*
Ga0137365_102164273	3300012201	Vadose Zone Soil	MAREGYTFVLDGANVEKLKTLPDFEGREEPALAEDFMRFRVETWAENLGDAGAAPGEVSVSVDPHQRKAHLFRGATKLFSADI*
Ga0137374_100704534	3300012204	Vadose Zone Soil	MAREGYTFVLDGANVEKLKTLPDFEGREEPALAEDFMRFRVETWADNLVDAGAAPGEVSVSVDPHQRKAHLFRGATKLFSADI*
Ga0137374_110541622	3300012204	Vadose Zone Soil	MERDGYRFVLERAEVQKLKSLSDFEAREEPALPEDFLRFRVEGWAENLADAGAARGEVAVRVDPHQRKAHLLRDETVLFSADI*
Ga0137380_111761482	3300012206	Vadose Zone Soil	MTRDLPVDYRRESDGYTFVLDRRNVEKLKAMPDFEGREEPAVAEDFLRFRIEAWTENLTDAGAKPGEVTVAIDPHQRKAHLSRGAALLFSADI*
Ga0137381_102435372	3300012207	Vadose Zone Soil	MAREGYTFVLDRANVEKLKTLPDFEGREEPALAEDFMRFRVETWADNLGDAGAAPGEVAVSVDPHQRKAHLFRGATKLFSADI*
Ga0137379_103799601	3300012209	Vadose Zone Soil	MAREGYTFVLDRANVEKLKTLPDFEGREEPALAEDFMRFRVETWAENLGDAGAAPGEVSVSVDPHQRKAHLFRGATKLFSADI*
Ga0137378_103327502	3300012210	Vadose Zone Soil	MSYRREKDGYTFVLDRGNIDRLRAIAEFEGREEPALVEDFLRFRVEEWAENLADAGASPGEVAVELDSHQRKAHLVRGSSRLFSADI*
Ga0137378_107329122	3300012210	Vadose Zone Soil	MTMNRPMTYRREKDGYTFVLDRGNIDRLRAIAEFEGREEPALVEDFLRFRVEGWAENLADAGASPGEVAVELDSHQRKAHLVRGSSRLFSADI*
Ga0137367_102546653	3300012353	Vadose Zone Soil	MAREGYTFVLDRANVEKLKTLPDFEGREEPALAEDFMRFRVETWADNLGDAGAAPGEVSVSVDPHQRKAHLFRGATKLFSADI*
Ga0137367_111152602	3300012353	Vadose Zone Soil	MAREGYTFLLDSANVEKLKSLPDFEGREEPALAEDFLRFRVEAWADNLADAGAPPGEVSVSLDPHQRKAHLLRGAVKLFSADI*
Ga0137366_102897162	3300012354	Vadose Zone Soil	VDRLKVLPDFEGKEEPALAEDFLRFRVEAWAENLSDAGAAKGEVSVSVDPHQRKAHLNRGSAKLFSADI*
Ga0137369_101024353	3300012355	Vadose Zone Soil	MAREGYMFELDRANVEKLKTLPDFEGREEPALAEDFMRFRVETWADNLGDAGAAPGEVSVSVDPHQRKAHLFRGATKLFSADI*
Ga0137369_104309032	3300012355	Vadose Zone Soil	VPEALIFLLVSPGAADRKTYLMEREGYTFSLDGANVEKLKDLPDFEGKEEPALAEDFLRFRVETWAENLADAGAAPGEVSVSVDPHQRKAHLTRGAAKLFSADI*
Ga0137371_108711541	3300012356	Vadose Zone Soil	NPRPGGGKTYRMEREGYLFALDSSNVAKLKALSDFEGKEEPALAEDFLRFRVEAWAENLTDAGARPGDVSVSVDPHQRKAHLIRGATTLFSADI*
Ga0137368_102155171	3300012358	Vadose Zone Soil	NRSMALKFPFVTDKPRASAPYRMAREGYMFELDRANVEKLKTLPDFEGREEPALAEDFMRFRVETWADNLGDAGAAPREVSVSVDPHQRKAHLFRGETKLFSADI*
Ga0137375_100832474	3300012360	Vadose Zone Soil	MAREGYMFVLDRANVEKLKTLPDFEGREEPALAEDFMRFRVETWADNLGDAGAAPGEVSVSVDPHQRKAHLFRGATKLFSADI*
Ga0137375_101107203	3300012360	Vadose Zone Soil	MAREGYTFVLDRANVEKLKTLPDFEGREEPALAEDFLRFRVETWAENLGDAGAAPGEVSVSVDPHQRKAHLFRGATKLFSADI*
Ga0137375_109829352	3300012360	Vadose Zone Soil	PMSYRREKDGYTFVLDRGNVDRLRAIAEFEGREEPALVEDFLRFRVEGWAENLADVGASPGEVAVELDSHQRKAHLVRGSSRLFSADI*
Ga0137390_103416602	3300012363	Vadose Zone Soil	MSYRREKDGYTFVLDRGNIDRLRAIAEFEGREEPALVEDFLRFRVEGWAENLADAGASPGEVGVELDSHQRKAHLVRGSSRLFSADI*
Ga0137373_103803623	3300012532	Vadose Zone Soil	PDFEGREEPALAEDFMRFRVETWAENLGDAGAAPGEVSVSVDPHQRKAHLFRGATKLFSADI*
Ga0137373_108753341	3300012532	Vadose Zone Soil	MAREGYTFVLDQANVEKLKTLPDFEGREEPALAEDFMRFRVETWADNLGDAGAAPGEVSVSVDPHQRKAHLFRGA
Ga0136614_109510381	3300012684	Polar Desert Sand	MKTTDHPARKEPYRVEWEGYAFSLERRDVEILKALPDFEGREEPAVADEFLRFRAERWAENLSDAGAAPGEVAVRIDPHQRKAHLLRGSTLLFSAEL*
Ga0153915_1000348214	3300012931	Freshwater Wetlands	MSTNPGGDGTYRMARDGYTFVLDRSNVEKLRTLPDFEGKEEPALAEDFLRFRVETWAENLGDAGAPPGEVSVSVDPHQRKAHLSRGASVLFSADI*
Ga0132258_131332143	3300015371	Arabidopsis Rhizosphere	MKREGYTFSIDGENVKRLKSLPDFEDKEEPALAEDFLRFRVEAWAENLADAGADPGDVAVTVDPHQRKAHLLRGSTKLFSADI*
Ga0132255_1009181542	3300015374	Arabidopsis Rhizosphere	MKREGYTFSIDGENVKRLKSLPDFEDKEEPALAEDFLRFRVEAWAENLVDAGADPGDVAVTVDPHQRKAHLLRGSTKLFSADI*
Ga0187824_100644462	3300017927	Freshwater Sediment	MSRPEVYRRNQEGYTFLLDRANVDRLKGVPEFEGREEPAVAEDFLRFRVEAWAENLADAGAAPGEITVHVDPHQRKAHLERNAAVLFSADL
Ga0187825_100256662	3300017930	Freshwater Sediment	MSRPEVYRRTQEGYTFLLDRANVDRLKGVPEFEGREEPAVAEDFLRFRVEAWAENLADAGAAPGEITVHVDPHQRKAHLERNAAVLFSADL
Ga0193751_10883962	3300019888	Soil	VLDGENVDRLKTLADFEAKEEPALAEDFLRFRVEAWAENLADAGAVPGDVFVSVDPHQRKAHLVRSSETLFSADI
Ga0210384_103352241	3300021432	Soil	MTMNRPPSYRREKDGYTFVLDRGNVDRLRAIAEFEGREEPALAEDFLRFRVEAWAENLADVGVSPGEVAVQLDSHQRKAHLVRGSSRLFSADI
Ga0126371_102114223	3300021560	Tropical Forest Soil	MFVLDRVDVDRLKGMPEFEGREEPAVAEDFLRFRVEAWAENLADAGAGPGQIGVRVDPHQRKAHLERDTAVLFSADI
Ga0126371_126464991	3300021560	Tropical Forest Soil	MTRPPSYRRQRDGYTFVLDRADVDRLKGMPEFEGREEPAVAEDFLRFRVETWAENLADAGAGPGLVGVRIDPHQRKAHLERDAAVLFSADI
Ga0207653_102383891	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MIREGYTFVLDGENVDRLKTLADFEAKEEPALAEDFLRFRVEAWAENLADAGAAPGDVFVSVDPHQRKTHLVRASETLFSADI
Ga0207684_101379322	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLDRPGSYRREKDGYTFVLDRGNIDRLKAIAEFEGREEPALAEDFLRFRVEEWAENLADAGASPGEIAVELDSHARKAHLVRGAARLFSADI
Ga0207684_103142592	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSPNTTSGKTYRMDREGYTFALDPANVQKLKALPDFELKEEPALAEDFLRFRVEAWAENLADAGAHPGDVSVSIDPHQRKAHLARGAMVLFSADI
Ga0207646_107996153	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	TYRMDREGYTFALDPANVQKLKALPDFELKEGPALAEDFLRFRVEAWAENLADAGAHPGDVSVSIDPHQRKAHLARGAMVLFSADI
Ga0207646_111167602	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTQNPGSYQREKDGYTFVLDRPNVERLKAIPEFEGREEPAVADEFLRYRVETWAENLADAGADRGEIAVQLDPHQRKAHLSRASSILF
Ga0209801_11357371	3300026326	Soil	YLFALDSSNVAKLKALSDFEGKEEPALAEDFLRFRVEAWAENLTDAGARPGDVSVSVDPHQRKAHLIRGATTLFSADI
Ga0209009_100020022	3300027667	Forest Soil	MTKEGYTFVLDGENVDRLKTLADFEAKEEPALAEDFLKFHVEAWAENLADAGAASGDVFVSVDPHQRKTHLVRGATKLFSADI
Ga0209590_108602701	3300027882	Vadose Zone Soil	MVDRPVSYRREKDGYTFVLDRGNIDRLKAIAEFEGREEPALAEDFLRFRVEEWAENLADAGASPGEVAVELDSHQRKAHLVRGSARLFSADI
Ga0307504_101454012	3300028792	Soil	KEVPADYRREKDGYTFVLDHRNVEKLKAMPDFEGREEPAVAEDFLRFRIEAWAENLTDALAKPGDVVVAIDPHQRKAHLSRGSVVLFSADI
Ga0307281_102206202	3300028803	Soil	MTKESYTFVLDGENVDLLKTLADFEAREEPALAEDFLKFRVEAWAENLADAGATPGDVFVSVDPHQRKTHLVRGATKLFSADI
Ga0307469_100316394	3300031720	Hardwood Forest Soil	MAKEVPADYRREKDGYTFVLDHRNVEKLKAMPDFEGREEPAVAEDFLRFRIEAWAENLTDALAKPGDVVVAIDPHQRKAHLSRGSVVLFSADI
Ga0307469_102229052	3300031720	Hardwood Forest Soil	MALKFPFVTDGPPYRMAREGYTFVLDPANVQKLKALPESEGREEPALAEDFLRFRVETWAENLGDAGAAPGEVSVSVDLHQRKAHLTRGATTLFSADI
Ga0307469_103695572	3300031720	Hardwood Forest Soil	MIREGYTFVLDGENVDRLKSLADFEAEEEPALAEDFLRFRVEAWAENLADAGAVPGDVFVSVDPHQRKAHLERSSETLFSADI
Ga0307469_105309782	3300031720	Hardwood Forest Soil	MAIKFQSMSRERPAEYRREEDGYTFVLDRVNVDRLKAMPDFEGREEPAVAEDFLRFRVESWAESLASAGAREGQIAVSIDSHQRKAHLSREKVLLFSADI
Ga0307469_107304632	3300031720	Hardwood Forest Soil	REENGYSFVLDRVNVDKLKAMPDFEGREEPAVAEDFLRFRVESWAENLASAGARQGQIAVSIDPHQRKAHLSRDEVLLFSADI
Ga0307469_112299171	3300031720	Hardwood Forest Soil	MTREGYTFVLDGENVDRLKTLADFEAKEEPALAEDFLRFRVETWAENLADAGAVPGDVTVSVDPHQRKTHLERSSETLFSADI
Ga0307469_118401071	3300031720	Hardwood Forest Soil	TYRMKKEGYTFVLDGENVDRLKTLADFESREEPALADDFLKFRVETWAENLADARAAPGDVSVSVDPHQRKTHLVRGATKLFSADI
Ga0307468_1005788831	3300031740	Hardwood Forest Soil	MIREGYTFVLDGENVDRLKTLADFEGKEEPALAEDFLRFRVEAWAENLADAGAVPGDVFVSVDPHQRKAHLER
Ga0307473_107450442	3300031820	Hardwood Forest Soil	MAIKFQSMSRERPAEYRREEDGYTFVLDRVNVDRLKAMPDFEGREEPAVAEDFLRFRVESWAESLASAGAREGQIAVSIDSHQRK
Ga0307473_114210041	3300031820	Hardwood Forest Soil	MKREGYTFSIDGENVKRLKSLPDFEDKEEPALAEDFLRFRVEAWAENLADAGADPGEVAVTVDPHQRKAHLLRGSTKLFSADI
Ga0306922_121989381	3300032001	Soil	MYRRERDGYHFVLDRGNVEKLKAMPDFEGREEPAVAEDFLRFRIEAWAENLADAGAKPGDVAVAIDPHQRKAHLSRGS
Ga0307471_1010501282	3300032180	Hardwood Forest Soil	MSRERPAEYRREEDGYTFVLDRVNVDKLKAMPDFEGREEPAIAEDFLRFRVESWAESLASAGAREGQIAVSIDSHQRKAHLSREKVLLFSADI
Ga0307471_1021689082	3300032180	Hardwood Forest Soil	MTREGYTFVLDGENVDRLKTLADFETKEEPALAEDFLRFRVEAWAENLADAGAVPGDVIVSVDPHQRKTHLVRSSETLFSADI
Ga0326726_109248462	3300033433	Peat Soil	MAREGYTFVLDHANVEKLKALPDFEGREEPALAEDFLRFRVETWAENLSDAGAAPGEVSVSLDLHQRKAHLTRGGTKLFSADI
Ga0326726_114665092	3300033433	Peat Soil	VLDEAGVQRLKALPDFEGREEPALAEDFLRFRVETWAENLSDAGAAPGEVSVSVDPHQRKAHLVRGETTLFSADI
Ga0326723_0150858_737_988	3300034090	Peat Soil	MAREGYTFVLDHANVEKLKTLPDFEGREEPALPEDFLRFRVETWAENLSDAGAAPGEVSVSLDLHQRKAHLTRGGTKLFSADI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064024

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences