Metagenome / Metatranscriptome Family F064001

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064001
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	45 residues
Representative Sequence	MRYTEAVTIAKDGTPVLDLTRIGALEPDVGDRQEPGWTEREEEG
Number of Associated Samples	103
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.20 %
% of genes near scaffold ends (potentially truncated)	90.70 %
% of genes from short scaffolds (< 2000 bps)	85.27 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.643 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (50.388 % of family members)
Environment Ontology (ENVO)	Unclassified (60.465 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (48.062 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.56% β-sheet: 8.33% Coil/Unstructured: 86.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF16576	HlyD_D23	7.75
PF13533	Biotin_lipoyl_2	6.98
PF01007	IRK	3.88
PF00873	ACR_tran	3.10
PF04909	Amidohydro_2	2.33
PF02780	Transketolase_C	1.55
PF07690	MFS_1	1.55
PF00654	Voltage_CLC	0.78
PF10041	DUF2277	0.78
PF13460	NAD_binding_10	0.78
PF00239	Resolvase	0.78
PF00871	Acetate_kinase	0.78
PF02321	OEP	0.78
PF00691	OmpA	0.78
PF02779	Transket_pyr	0.78
PF00529	CusB_dom_1	0.78
PF01872	RibD_C	0.78
PF01070	FMN_dh	0.78
PF16694	Cytochrome_P460	0.78
PF00884	Sulfatase	0.78
PF14759	Reductase_C	0.78
PF00115	COX1	0.78
PF13701	DDE_Tnp_1_4	0.78
PF00486	Trans_reg_C	0.78
PF09084	NMT1	0.78
PF17090	Ytca	0.78
PF01041	DegT_DnrJ_EryC1	0.78
PF05598	DUF772	0.78
PF05362	Lon_C	0.78
PF08445	FR47	0.78
PF05016	ParE_toxin	0.78
PF00456	Transketolase_N	0.78
PF04392	ABC_sub_bind	0.78
PF00106	adh_short	0.78
PF01925	TauE	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.55
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.78
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.78
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	0.78
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	0.78
COG3426	Butyrate kinase	Energy production and conversion [C]	0.78
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.78
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.78
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.78
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.78
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.78
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	0.78
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.78
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	0.78
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.78
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.78
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.78
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.78
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.78
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG0282	Acetate kinase	Energy production and conversion [C]	0.78
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.78
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.78
COG0038	H+/Cl- antiporter ClcA	Inorganic ion transport and metabolism [P]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.64 %
Unclassified	root	N/A	26.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.64 %
Unclassified	root	N/A	26.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.64 %
Unclassified	root	N/A	26.36 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	51.16 %
Unclassified	root	N/A	26.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	28.68 %
Unclassified	root	N/A	26.36 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.36 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	16.28 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.75 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.33 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.36 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.20 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.33 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.78 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.36 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.43 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.33 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	0.78 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.36 %
unclassified Azospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.33 %
Bradyrhizobium canariense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	0.78 %
unclassified Acidisphaera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera	0.78 %
Magnetospirillum magnetotacticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum magnetotacticum	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.33 %
Azospirillum sp. B4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B4	1.55 %
Acidisphaera sp. S103	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	0.78 %
Azospirillum sp. OGB3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. OGB3	0.78 %
Bradyrhizobium canariense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	0.78 %
Magnetospirillum magnetotacticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum magnetotacticum	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573000\|GPBTN7E02IL5LH	Not Available	527	Open in IMG/M
3300003218\|JGI26339J46600_10040632	All Organisms → cellular organisms → Bacteria → Proteobacteria	1278	Open in IMG/M
3300004080\|Ga0062385_10078442	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300004080\|Ga0062385_10965338	Not Available	570	Open in IMG/M
3300004091\|Ga0062387_101187270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium canariense	597	Open in IMG/M
3300005332\|Ga0066388_101842940	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300005435\|Ga0070714_101835980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	592	Open in IMG/M
3300005435\|Ga0070714_101969170	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300005467\|Ga0070706_100134425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2309	Open in IMG/M
3300005471\|Ga0070698_100090473	All Organisms → cellular organisms → Bacteria → Proteobacteria	3043	Open in IMG/M
3300006173\|Ga0070716_100890630	All Organisms → cellular organisms → Bacteria → Proteobacteria	696	Open in IMG/M
3300010048\|Ga0126373_12693894	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300010343\|Ga0074044_10367359	All Organisms → cellular organisms → Bacteria → Proteobacteria	943	Open in IMG/M
3300010358\|Ga0126370_11191778	Not Available	708	Open in IMG/M
3300010359\|Ga0126376_12799822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	537	Open in IMG/M
3300010361\|Ga0126378_10851471	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300010366\|Ga0126379_13410371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300010376\|Ga0126381_100113365	All Organisms → cellular organisms → Bacteria → Proteobacteria	3491	Open in IMG/M
3300010376\|Ga0126381_100717970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1430	Open in IMG/M
3300010376\|Ga0126381_104799497	Not Available	520	Open in IMG/M
3300010862\|Ga0126348_1064113	Not Available	510	Open in IMG/M
3300012212\|Ga0150985_108327255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	559	Open in IMG/M
3300016270\|Ga0182036_10146991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1673	Open in IMG/M
3300016294\|Ga0182041_11142844	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300016341\|Ga0182035_10017383	All Organisms → cellular organisms → Bacteria	4381	Open in IMG/M
3300016357\|Ga0182032_10026895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3447	Open in IMG/M
3300016371\|Ga0182034_10392031	All Organisms → cellular organisms → Bacteria → Proteobacteria	1137	Open in IMG/M
3300016387\|Ga0182040_11363657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	600	Open in IMG/M
3300016387\|Ga0182040_11943822	Not Available	505	Open in IMG/M
3300016422\|Ga0182039_11385626	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300016422\|Ga0182039_12217241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	507	Open in IMG/M
3300016445\|Ga0182038_10541523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	998	Open in IMG/M
3300016445\|Ga0182038_11463459	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300016445\|Ga0182038_11542630	Not Available	597	Open in IMG/M
3300018006\|Ga0187804_10418494	All Organisms → cellular organisms → Bacteria → Proteobacteria	595	Open in IMG/M
3300020579\|Ga0210407_11184833	Not Available	575	Open in IMG/M
3300020583\|Ga0210401_11244840	Not Available	602	Open in IMG/M
3300021171\|Ga0210405_10050682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum magnetotacticum	3286	Open in IMG/M
3300021178\|Ga0210408_10731346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	778	Open in IMG/M
3300021403\|Ga0210397_10393088	Not Available	1035	Open in IMG/M
3300021432\|Ga0210384_10543802	Not Available	1045	Open in IMG/M
3300021476\|Ga0187846_10468696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	515	Open in IMG/M
3300021478\|Ga0210402_10951538	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300021479\|Ga0210410_10553535	All Organisms → cellular organisms → Bacteria → Proteobacteria	1024	Open in IMG/M
3300021560\|Ga0126371_10152517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2373	Open in IMG/M
3300021560\|Ga0126371_11473106	All Organisms → cellular organisms → Bacteria → Proteobacteria	810	Open in IMG/M
3300021560\|Ga0126371_12627179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	610	Open in IMG/M
3300022721\|Ga0242666_1012969	Not Available	1466	Open in IMG/M
3300025898\|Ga0207692_10630648	Not Available	691	Open in IMG/M
3300025928\|Ga0207700_11478035	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300025929\|Ga0207664_11182102	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300025929\|Ga0207664_11605932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	572	Open in IMG/M
3300027729\|Ga0209248_10022918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. OGB3	1952	Open in IMG/M
3300027986\|Ga0209168_10098564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1509	Open in IMG/M
3300030730\|Ga0307482_1083210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	847	Open in IMG/M
3300030740\|Ga0265460_12676058	Not Available	534	Open in IMG/M
3300030741\|Ga0265459_12393457	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300031561\|Ga0318528_10116380	All Organisms → cellular organisms → Bacteria → Proteobacteria	1411	Open in IMG/M
3300031564\|Ga0318573_10414587	Not Available	724	Open in IMG/M
3300031572\|Ga0318515_10380936	Not Available	756	Open in IMG/M
3300031640\|Ga0318555_10244907	All Organisms → cellular organisms → Bacteria → Proteobacteria	968	Open in IMG/M
3300031668\|Ga0318542_10612766	Not Available	568	Open in IMG/M
3300031672\|Ga0307373_10628165	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300031679\|Ga0318561_10334592	Not Available	830	Open in IMG/M
3300031680\|Ga0318574_10333034	Not Available	884	Open in IMG/M
3300031680\|Ga0318574_10620751	Not Available	634	Open in IMG/M
3300031681\|Ga0318572_10374105	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300031682\|Ga0318560_10298195	All Organisms → cellular organisms → Bacteria → Proteobacteria	868	Open in IMG/M
3300031719\|Ga0306917_11470261	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300031724\|Ga0318500_10315831	Not Available	767	Open in IMG/M
3300031736\|Ga0318501_10267450	All Organisms → cellular organisms → Bacteria → Proteobacteria	907	Open in IMG/M
3300031744\|Ga0306918_10764471	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300031744\|Ga0306918_11083927	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300031747\|Ga0318502_10008402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4564	Open in IMG/M
3300031747\|Ga0318502_10739642	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300031748\|Ga0318492_10020702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2853	Open in IMG/M
3300031754\|Ga0307475_10494444	All Organisms → cellular organisms → Bacteria → Proteobacteria	982	Open in IMG/M
3300031763\|Ga0318537_10271174	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300031764\|Ga0318535_10004389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4531	Open in IMG/M
3300031765\|Ga0318554_10139542	All Organisms → cellular organisms → Bacteria → Proteobacteria	1374	Open in IMG/M
3300031765\|Ga0318554_10621779	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300031768\|Ga0318509_10158018	All Organisms → cellular organisms → Bacteria → Proteobacteria	1252	Open in IMG/M
3300031778\|Ga0318498_10349114	All Organisms → cellular organisms → Bacteria → Proteobacteria	661	Open in IMG/M
3300031781\|Ga0318547_10002894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B4	6791	Open in IMG/M
3300031782\|Ga0318552_10671560	Not Available	528	Open in IMG/M
3300031793\|Ga0318548_10491186	Not Available	600	Open in IMG/M
3300031794\|Ga0318503_10039749	All Organisms → cellular organisms → Bacteria → Proteobacteria	1408	Open in IMG/M
3300031797\|Ga0318550_10004260	All Organisms → cellular organisms → Bacteria → Proteobacteria	5002	Open in IMG/M
3300031797\|Ga0318550_10458179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300031798\|Ga0318523_10213339	All Organisms → cellular organisms → Bacteria → Proteobacteria	964	Open in IMG/M
3300031798\|Ga0318523_10520294	Not Available	588	Open in IMG/M
3300031805\|Ga0318497_10123213	Not Available	1405	Open in IMG/M
3300031805\|Ga0318497_10505182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	677	Open in IMG/M
3300031846\|Ga0318512_10007403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4075	Open in IMG/M
3300031846\|Ga0318512_10250786	All Organisms → cellular organisms → Bacteria → Proteobacteria	874	Open in IMG/M
3300031860\|Ga0318495_10013953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3366	Open in IMG/M
3300031879\|Ga0306919_10094230	Not Available	2093	Open in IMG/M
3300031890\|Ga0306925_10946069	All Organisms → cellular organisms → Bacteria → Proteobacteria	883	Open in IMG/M
3300031893\|Ga0318536_10011772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B4	3779	Open in IMG/M
3300031894\|Ga0318522_10017457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2281	Open in IMG/M
3300031897\|Ga0318520_10899071	Not Available	557	Open in IMG/M
3300031941\|Ga0310912_11087724	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300031942\|Ga0310916_11162601	Not Available	639	Open in IMG/M
3300031945\|Ga0310913_10970074	Not Available	596	Open in IMG/M
3300031945\|Ga0310913_11271547	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300031946\|Ga0310910_11228301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	581	Open in IMG/M
3300031947\|Ga0310909_10207179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1631	Open in IMG/M
3300031954\|Ga0306926_10382639	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300031954\|Ga0306926_12584712	Not Available	554	Open in IMG/M
3300031962\|Ga0307479_11106883	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300032001\|Ga0306922_10738537	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300032001\|Ga0306922_10894343	All Organisms → cellular organisms → Bacteria → Proteobacteria	922	Open in IMG/M
3300032010\|Ga0318569_10198444	All Organisms → cellular organisms → Bacteria → Proteobacteria	929	Open in IMG/M
3300032039\|Ga0318559_10451156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	600	Open in IMG/M
3300032051\|Ga0318532_10138695	All Organisms → cellular organisms → Bacteria → Proteobacteria	863	Open in IMG/M
3300032060\|Ga0318505_10399436	Not Available	650	Open in IMG/M
3300032060\|Ga0318505_10486456	Not Available	583	Open in IMG/M
3300032063\|Ga0318504_10074771	All Organisms → cellular organisms → Bacteria → Proteobacteria	1478	Open in IMG/M
3300032063\|Ga0318504_10314486	Not Available	742	Open in IMG/M
3300032076\|Ga0306924_12636656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	501	Open in IMG/M
3300032089\|Ga0318525_10438443	Not Available	669	Open in IMG/M
3300032261\|Ga0306920_100294995	All Organisms → cellular organisms → Bacteria	2415	Open in IMG/M
3300032261\|Ga0306920_102478107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	714	Open in IMG/M
3300032515\|Ga0348332_13078395	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300032898\|Ga0335072_10765937	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300033289\|Ga0310914_10993877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	739	Open in IMG/M
3300033290\|Ga0318519_10507575	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300033290\|Ga0318519_10844361	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300033405\|Ga0326727_10072545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4934	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.22%
Host-Associated	Host-Associated	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.57%
Aquatic	Environmental → Aquatic	4.65%
Plants	Host-Associated → Plants	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.25%
Freshwater	Environmental → Aquatic → Freshwater	4.65%
Peat	Environmental → Terrestrial → Peat	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.78%
Cave	Environmental → Terrestrial → Cave	0.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.17%
Loam	Environmental → Terrestrial → Soil → Loam	7.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.55%
Clay	Environmental → Terrestrial → Soil → Clay	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	71.32%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.98%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	50.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.10%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.78%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.78%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N55_02080850	2189573000	Grass Soil	IRFGLRYADAVTTAADGTPILDLTRIGALEPDLEDRPEQGWTEPEDERK
JGI26339J46600_100406322	3300003218	Bog Forest Soil	RYTDAVTLAEDGTPVFELTKIGALEPDVGDRPEPGWTEREEEQ*
Ga0062385_100784422	3300004080	Bog Forest Soil	VTTAEDGTPVLDLSKIGALEPDVGDNQEQGWMEREEERE*
Ga0062385_109653381	3300004080	Bog Forest Soil	RFGMRYTDAVTTAEDGTPVMDLTRIGALEPDVGDRQEPGWAEQEEEE*
Ga0062387_1011872702	3300004091	Bog Forest Soil	EDIRFGMRYTEAVTTARDGTPGFDLTTIGALEPDVGDRQEQGWTEREENV*
Ga0066388_1018429402	3300005332	Tropical Forest Soil	VTTAADGTPVLDLTRIGALEPDLGDRPEQGWTEPEDERK*
Ga0070714_1018359802	3300005435	Agricultural Soil	FGMRYADAVRIAQDGTPVADLTRIGALEPDVGDRQESGWTEREEERD*
Ga0070714_1019691701	3300005435	Agricultural Soil	NYAPGDIRFGMRYADAVMIAEDGTPIADLTKIGALEPDTGEYLEPGWTELEEVRE*
Ga0070706_1001344254	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	AVTTAEDGTLVADLTRIGALEPDVGEAREQGWTDREDVRE*
Ga0070698_1000904734	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AYVDVITTAEDGTPVLDLTQIGALEPDIGDHYEHGWTEREGS*
Ga0070716_1008906301	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RYYAPQDIRFGMRYADTVSFGRDGTPVADLRRIGAMEPDVGDREEAGWAEREVNE*
Ga0126373_126938942	3300010048	Tropical Forest Soil	YRDAVTIAEDGTPIADLRRIGALEPDVGDRQEPGWTEREENE*
Ga0074044_103673594	3300010343	Bog Forest Soil	YTDAVTIAEDGTPIADLRRIGALVLDVGDRQEPGWTEREKEQE*
Ga0126370_111917783	3300010358	Tropical Forest Soil	VRYADAVTTAADGTPFLDLTRIGALEPDLEDRPEQGWTEPEDERK*
Ga0126376_127998221	3300010359	Tropical Forest Soil	MRYTDAVTTAEDGTPVVDLTKIGLLEPDVGDRQEQGWTEREEGE*
Ga0126378_108514712	3300010361	Tropical Forest Soil	VTTARDGTPVLDLTTIGALEPDVGDRQEQGWTERE*
Ga0126379_134103711	3300010366	Tropical Forest Soil	RAADIRFGLRYADAVTTAADGTPVLDLTRIGALEPDTGDRPEQGWTEPGDEQK*
Ga0126381_1001133651	3300010376	Tropical Forest Soil	DAVTIAEDGTPVADLTRIGALEPDVGDRREHGWTEREEWSSELRA*
Ga0126381_1007179703	3300010376	Tropical Forest Soil	VPEDIRFGMRYTDAVTIAEDGTPIADLWRIGALEPDVGDRQEPGWTEREENE*
Ga0126381_1047994971	3300010376	Tropical Forest Soil	TADDGTPVLDLKRIGELEPDVGDRPEQGWTEREENV*
Ga0126348_10641131	3300010862	Boreal Forest Soil	LRYAEAVSTAQDGTRVADPTRIGALEPDLGDRQEQGWTER
Ga0150985_1083272551	3300012212	Avena Fatua Rhizosphere	GDGTPVLDLTRIGALEPDVGDHLEHGWTEREEVQE*
Ga0182036_101469911	3300016270	Soil	DAVTTADDGTPILDLKKIGELEPDVGDRPEQGWTEREKHE
Ga0182041_111428441	3300016294	Soil	YPAQDLRFGMRYTEALTTARDGTPVLDLTTIGALEPDVGDRQEQGWTEREENV
Ga0182035_100173831	3300016341	Soil	IRFGMRYADTASIGRDGKPVADLRRIGALEPDVGDRQEPGWTEREEDE
Ga0182032_100268953	3300016357	Soil	RTYMPEDIRFGMRYTDAVTIAEDGTPVADLTRVGALEPDVGDRQEPGRTEREEEVE
Ga0182034_103920313	3300016371	Soil	RYQDAVTTAADGTPVLDLTQIGALERDVGDRPEQGWTAREDGE
Ga0182040_113636573	3300016387	Soil	AKDRRFGMRYADAVRIADDGTPVLDLTRIGALEPDIGDRLEPGWAEHEVEQE
Ga0182040_119438222	3300016387	Soil	MRYQDAVTTAADGTPVLDLTKIGVLESDVGDRPEQGWTEREGSSSGLRE
Ga0182039_113856262	3300016422	Soil	VTIAEDGTPVADLTRVGALEPDVGDRQEPGWTEREEEQG
Ga0182039_122172411	3300016422	Soil	EDIRFGMRYTDAVTTAEDGTPVLDLTKIGLLEPDVGDRQEQGWKEREEGE
Ga0182038_105415235	3300016445	Soil	VTTAADGTPVLDLTKIGPLEPDVGDRTEQGWTEREETE
Ga0182038_114634591	3300016445	Soil	QDAVTTAADGTPVLDLTKIGALEPDVGDRPEQGWTGREENA
Ga0182038_115426302	3300016445	Soil	ADAVTTAADGTPILDLSKIGALEPDIGDRQEQGWTERE
Ga0187804_104184941	3300018006	Freshwater Sediment	DIRFGMRYADAVTTANDGTPVLDLTRIGALEPDLGDRQEQGWTEREENV
Ga0210407_111848331	3300020579	Soil	EDIRFGMRYAVSIAQDGTPVEDLTRIGALEPDVGDRQEVGWTEREEERD
Ga0210401_112448401	3300020583	Soil	RRKIYASACYADTASIERDGRSVADLRRIGALEPDVGDREEPGWTEREENQ
Ga0210405_100506823	3300021171	Soil	MRYRDAVTTAEDGTPILDLTRIGELEPDVGDRQEQGWTEREEERE
Ga0210408_107313462	3300021178	Soil	MRYADAVTFAEDGTPVADLTKIGTLEPDVGDYLEPGWTEREDASE
Ga0210397_103930881	3300021403	Soil	VTTAEDGTPILDLTRIGELEPDVGDCQEQGWTEREEERE
Ga0210384_105438022	3300021432	Soil	DGTPVVDLSRIGALEPDVGGDFREPGWTEREDELE
Ga0187846_104686962	3300021476	Biofilm	IARDGTPVADLTRIGALEPDVGDRQEPGWTEREEEE
Ga0210402_109515382	3300021478	Soil	APEDIRFGMRYADAVSIAQDGTPVEDLTRIGALEPDVGDRQEVGWTEREEERE
Ga0210410_105535351	3300021479	Soil	ESTAQDGTPVADLSQIGALEPDVGDRQESGWTEWEEERK
Ga0126371_101525176	3300021560	Tropical Forest Soil	RFGMRYSDAVTTANDGTPVLDVTRIGALEPDVGDRQEQGWTEREGSSFGLRE
Ga0126371_114731061	3300021560	Tropical Forest Soil	VQDTHYYAPADIRFGMRYAEAITMAKDGTPVVDLKQIGALEPDIGERPEPGWTEREEVR
Ga0126371_126271792	3300021560	Tropical Forest Soil	MRYADALTTADDGTPVFDLTRIGALEPDIGDHQEPGWTEHKVEQE
Ga0242666_10129691	3300022721	Soil	DAVSTAQDGTLVADLTRIGALEPDVGDRQEQGWTEREEERE
Ga0207692_106306481	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	YPAQDIRFGMRYTEALTTARDGTPALDLTRIGALEPDVGERREQGWTEREENL
Ga0207700_114780352	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GMRYADAVRIAQDGTPVADLTRIGALEPDVGDRQESGWTEREEERE
Ga0207664_111821022	3300025929	Agricultural Soil	MRYADAVTMAEDGTPVLDLTRIGALEPDIGGDFMEYGWTVREEE
Ga0207664_116059322	3300025929	Agricultural Soil	IVEAIRDYAPEDIRFGTRYADALTVAEDGTPVVDLSRIGALEPDVGGDFREPGWTEREDELE
Ga0209248_100229181	3300027729	Bog Forest Soil	VTTAEDGTPVLDLSKIGALEPDVGDNQEQGWMEREEERE
Ga0209168_100985641	3300027986	Surface Soil	GDDGLPVLNLTTLGELEPDVGDRTETGWTEREQRWG
Ga0307482_10832102	3300030730	Hardwood Forest Soil	MRYADAVTTAKDGTPVADLARIGALEPDVGDRPEPGWTEREGEWG
Ga0265460_126760581	3300030740	Soil	TARDGTLVADLTRIGALEPDVGDREESGWTEREEERK
Ga0265459_123934571	3300030741	Soil	DGTPMADLTRMGELEPDVGDRPEPGWSEREGELEQP
Ga0318528_101163801	3300031561	Soil	GMRYADALTTADDGTPVLDLTRIGALEPDVGDRPEQGWTEREEHE
Ga0318573_104145873	3300031564	Soil	GASDPQLWAKDIRFGTRYADAVTTADDGAPVLDLTRIGALEPDIGDRLEPGWAEHEVEQE
Ga0318515_103809361	3300031572	Soil	RYTEAVTAARDGTPVLDLTTFGALEPDVGDRQEQGWTEREENV
Ga0318555_102449072	3300031640	Soil	IRFGMRYTDAVTIAEDGTPVADLTRVGALEPDVGDRQEPGWTEREEEEE
Ga0318542_106127663	3300031668	Soil	MRYAHAVTTADDGTPVLDLTRIGALEPDLGDRQEPGWTEHEVEQE
Ga0307373_106281652	3300031672	Soil	DAVTMAEDGTPIADMTKIGALEPDAGDHLEPGWTEREEILE
Ga0318561_103345922	3300031679	Soil	GMRYADTASIGRDGKPVADLRRIGALEPDVGDRQEPGWTEREEDE
Ga0318574_103330341	3300031680	Soil	DIRFGMRYADTASIGRDGKPVADLRRIGALEPDVGDRQEPGWTEREEDE
Ga0318574_106207511	3300031680	Soil	MRYSDAVTTAKGGTPVLDVTRIGALEPDVGDRPEQGWTEREEWSSGLS
Ga0318572_103741051	3300031681	Soil	LRFGMRYTEALTTARDGTPVLDLTTIGALEPDVGDRQEQGWTEREENV
Ga0318560_102981952	3300031682	Soil	YMPEDIRFGMRYTDAVTIAEDGTPVADLTRIGALEPDVGDRQEPGWTEREEEEE
Ga0306917_114702612	3300031719	Soil	TAKDGTPVLDLTRIGELEPDVGDRQEQGWTEREEDG
Ga0318500_103158313	3300031724	Soil	VTTADDGAPVLDLTRIGALEPDIGDRLEPGWAEHEVEQE
Ga0318501_102674501	3300031736	Soil	YAPGDIRFGMRYRDAVTMAEGGTVVAADLTKIGALEPDVGERQEPGWTEQEPSWTEREEV
Ga0306918_107644713	3300031744	Soil	RFGMRYTEAITTARDGTPVLDLTTIGALEPDVGDRQEQGWTEREENA
Ga0306918_110839273	3300031744	Soil	MRYSDALTTAKDGTPVLDLTRIGALEPDVGDRQGQG
Ga0318502_100084023	3300031747	Soil	PEDIRFGMRYTDAVTIAEDGTPVADLTRVGALEPDVGDRQEPGWTEREEEEE
Ga0318502_107396422	3300031747	Soil	DIRFGMRYADAVTTAEDGAPVLDLTRIGALEQDVGDRREQGWTEREDGE
Ga0318492_100207021	3300031748	Soil	IAEDDTPVADLTRVGALEPDVGDRQEPGRTEREEEVE
Ga0307475_104944442	3300031754	Hardwood Forest Soil	VTTAEDRTPVADLTRMGELEPDVGDRPEPGWTEREEELG
Ga0318537_102711742	3300031763	Soil	AAEDIRFGMRYADVVTTAADGAPVLDLTRIGALEQDVGDRREQGWTEREDSE
Ga0318535_100043891	3300031764	Soil	EDGTPVADLTRIGALEPDVGDRQEPGWTEREEEEE
Ga0318554_101395422	3300031765	Soil	KDMRFGMRYADALTTADDGTPVLDLTRIGALEPDVGDRPEQGWTEREEHE
Ga0318554_106217791	3300031765	Soil	MRYADVVTTAADGAPVLDLTRIGALEQDVGDRREQGWTEREDGE
Ga0318509_101580181	3300031768	Soil	DVVTIAEDGTPIADLRRIGALEPDVGDRQEPGWTEREEEQE
Ga0318498_103491141	3300031778	Soil	VTIAEDGTPVADLTRIGALEPDVGDRQEPGWTEREEEEE
Ga0318547_100028941	3300031781	Soil	IRTYAAEDIRFGMRYTDAATKEEDGTPVLDPIRIGVREPDIGECQEQGWTEREEERE
Ga0318552_106715601	3300031782	Soil	ARDGTPVLDLTTFGALEPDVGDRQEQGWTEREENV
Ga0318548_104911861	3300031793	Soil	TYVAKDIRFGMRYAHAVTTADDGTPVLDLTRIGALEPDLGDRQEPGWTEHEVEQE
Ga0318503_100397492	3300031794	Soil	FGMRYADAVTTADDGTPILDLKKIGELEPDVGDRPEQGWTEREKHE
Ga0318550_100042601	3300031797	Soil	RYTDAVTIAEDGTPVADLTRVGALEPDVGDRQEPGWTEREEEEE
Ga0318550_104581792	3300031797	Soil	RYTEAITTARDGTPVLDLTTIGALEPDVGDRPEQGWTEREENA
Ga0318523_102133392	3300031798	Soil	IAEDGTPVADLTRIGALEPDVGDRQEPGWTEREEEEE
Ga0318523_105202941	3300031798	Soil	AEDIRFGMRYTEAVTAARDGTPVLDLTTFGALEPDVGDRQEQGWTEREENV
Ga0318497_101232131	3300031805	Soil	FGMRYADAVTTADDGVPVFDLTRIGALEPDVGDRQEQGWTEREEVE
Ga0318497_105051821	3300031805	Soil	DIRFGMRYTEAVTTERDGTPVLDLTTIGALEPDVGERREQGWTEREENL
Ga0318512_100074031	3300031846	Soil	FGMRYTDAVTIAEDDTPVADLTRVGALEPDVGDRQEPGWTEREEEEE
Ga0318512_102507862	3300031846	Soil	IRNYPAKDMRFGMRYADALTTADDGTPVLDLTRIGALEPDVGDRPEQGWTEREEHE
Ga0318495_100139531	3300031860	Soil	AVTTAADGTPVLDLTKIGALEPDVGDRPEQGWTEREETE
Ga0306919_100942303	3300031879	Soil	RYADAVTTADDGAPVLDLTRIGALEPDIGDRLEPGWAEHEVEQE
Ga0306925_109460691	3300031890	Soil	RFGMRYQDAVTTAADGTPVLDLTQIGALERDVGDRPEQGWTAREDGE
Ga0318536_100117721	3300031893	Soil	EDGTPVLDPIRIGVREPDIGECQEQGWTEREEERE
Ga0318522_100174571	3300031894	Soil	YTDAVTIAEDGTPVADLTRVGALEPDVGDRQEPGWTEREEEEE
Ga0318520_108990712	3300031897	Soil	RYSDAVTTAKDGTPVLDVTRIGALEPDVGDRQEQGWTEREEDG
Ga0310912_110877241	3300031941	Soil	ADAVTTAEDGAPVLDLTRIGALEQDVGDRREQGWTEREDGE
Ga0310916_111626011	3300031942	Soil	FGMRYSDAVTTAKDGTPVLDVTRIGALEPDVGDRQEQGWTEREEDG
Ga0310913_109700741	3300031945	Soil	ALTTARDGTPVLDLTTIGALEPDVGDRQEQGWTEREENV
Ga0310913_112715472	3300031945	Soil	TTAADGAPILDLTRIGALEQDVGDRREQGWTERADSE
Ga0310910_112283012	3300031946	Soil	DIRFGMRYRDAVTTAGGGTVVAADLTKIGALEPDVGEHEEPGWTEREPSWTEREEVR
Ga0310909_102071792	3300031947	Soil	MRYTEAVTTARDGTPVLDLTTIGALEPDAGDRQEQGWTEREENV
Ga0306926_103826391	3300031954	Soil	AQDLRFGMRYTEAITTARDGTPVLDLTTIGALEPDVGDRQEQGWTEREENA
Ga0306926_125847121	3300031954	Soil	SDAVTTAKDGTPVLDVTRIGALEPDVGDRQEQGWTEREEDG
Ga0307479_111068831	3300031962	Hardwood Forest Soil	MRYADTASIERDGRSVADLRRIGALGPDVGDREEPGWTEREENQ
Ga0306922_107385372	3300032001	Soil	TAADGTPVLDLTKIGALEPDVGDRPEQGWTGREENA
Ga0306922_108943431	3300032001	Soil	MRYQDAVTTAADGTPVLDLTQIGALERDVGDRPEQGWTAREDGE
Ga0318569_101984442	3300032010	Soil	AEDGTPVADLTRVGALEPDVGDRQEPGWTEREEEEE
Ga0318559_104511562	3300032039	Soil	MSPRIYASAWRYADAVTTADDGTPVLDLTRIGALESDLGDRQEPGWTEHEVE
Ga0318532_101386952	3300032051	Soil	YVPEDIRFGMRYTDAVTIAEDGTPIADLRRIGALEPDVGDRQEPGWTEREEEQE
Ga0318505_103994364	3300032060	Soil	AKDGTPVLDLTRIGALEPDVGDRQEQGWTEREEDG
Ga0318505_104864562	3300032060	Soil	RYTEALTTARDGTPVLDLTTIGALEPDVGDRQEQGWTEREENV
Ga0318504_100747711	3300032063	Soil	DIRFGMRYTDAVTIAEDGTPVADLTRIGALEPDVGDRQEPGWTEREEEEE
Ga0318504_103144862	3300032063	Soil	MRYADAVTTADDGVPVFDLTRIGALEPDVGDRQEQGWTEREEVE
Ga0306924_126366561	3300032076	Soil	FGMRYTDAVTIAEDGTPIADLRRIGALEPDVGDRQEPGWTEREENE
Ga0318525_104384431	3300032089	Soil	FGMRYTDAVTIAEDGTPIADLRRIGALEPDVGDRQEPGWTEHEVEQE
Ga0306920_1002949951	3300032261	Soil	NYPAQDLRFGMRYTEAITTARDGTPVLDLTTIGALEPDVGDRQEQGWTEREENA
Ga0306920_1024781071	3300032261	Soil	MPEDIRFGMRYMDAVTIAEDGSPVADLTRIGALEPDVGDRQEPGWTE
Ga0348332_130783951	3300032515	Plant Litter	QDGTPVLDLTRIGELEPDVGDCQEQDWTEREEERE
Ga0335072_107659371	3300032898	Soil	DDGLPVLDLMAIGALEPDVGDRHESGWTEREEGWG
Ga0310914_109938771	3300033289	Soil	MRYTEAVTIAKDGTPVLDLTRIGALEPDVGDRQEPGWTEREEEG
Ga0318519_105075752	3300033290	Soil	PADIRFGMRYTEAVTIAKDGTPVLDLTRIGALEPDVGDRQEPGWTEREEEG
Ga0318519_108443611	3300033290	Soil	YAAEDIRFGMRYADAVTTAADGAPVLDLTRIGALEQDVGDRREQGWTEREDRE
Ga0326727_100725452	3300033405	Peat Soil	MRYSDAVTTAEDGTPLLDLTRIVALEPDVGDRQEQGWTESEESSSRLRD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064001

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences