Metagenome Family F063988

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063988
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	40 residues
Representative Sequence	KMDMTYRPPDHLERLVAALYQTPPALIETVKKLVPSVQ
Number of Associated Samples	115
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.20 %
% of genes near scaffold ends (potentially truncated)	90.70 %
% of genes from short scaffolds (< 2000 bps)	93.02 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.519 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.256 % of family members)
Environment Ontology (ENVO)	Unclassified (24.031 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.287 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.91% β-sheet: 0.00% Coil/Unstructured: 59.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF08501	Shikimate_dh_N	51.94
PF03401	TctC	8.53
PF00005	ABC_tran	6.20
PF01381	HTH_3	2.33
PF03480	DctP	1.55
PF13417	GST_N_3	0.78
PF02627	CMD	0.78
PF04134	DCC1-like	0.78
PF01977	UbiD	0.78
PF00857	Isochorismatase	0.78
PF00501	AMP-binding	0.78
PF13560	HTH_31	0.78
PF02653	BPD_transp_2	0.78
PF00903	Glyoxalase	0.78
PF03061	4HBT	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0169	Shikimate 5-dehydrogenase	Amino acid transport and metabolism [E]	51.94
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	8.53
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.78
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.78
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.78
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.78
COG3011	Predicted thiol-disulfide oxidoreductase YuxK, DCC family	General function prediction only [R]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.52 %
Unclassified	root	N/A	22.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.52 %
Unclassified	root	N/A	22.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.52 %
Unclassified	root	N/A	22.48 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	72.09 %
Unclassified	root	N/A	22.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	64.34 %
Unclassified	root	N/A	22.48 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.55 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.93 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.10 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.10 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	2.33 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.55 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.78 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.10 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.33 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.78 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.10 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.33 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.78 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.10 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.33 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.78 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459021\|G14TP7Y01EXHG5	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1079753	All Organisms → cellular organisms → Bacteria → Proteobacteria	575	Open in IMG/M
3300001661\|JGI12053J15887_10358961	Not Available	704	Open in IMG/M
3300002239\|JGI24034J26672_10087194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	576	Open in IMG/M
3300004479\|Ga0062595_100269680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1121	Open in IMG/M
3300004633\|Ga0066395_10338336	Not Available	833	Open in IMG/M
3300005148\|Ga0066819_1027676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300005179\|Ga0066684_10510660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	806	Open in IMG/M
3300005327\|Ga0070658_10696809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	881	Open in IMG/M
3300005330\|Ga0070690_100313290	All Organisms → cellular organisms → Bacteria → Proteobacteria	1129	Open in IMG/M
3300005467\|Ga0070706_100884824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	825	Open in IMG/M
3300005529\|Ga0070741_11703652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	513	Open in IMG/M
3300005564\|Ga0070664_100443121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1191	Open in IMG/M
3300005564\|Ga0070664_101293025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	689	Open in IMG/M
3300005602\|Ga0070762_10524345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	779	Open in IMG/M
3300005713\|Ga0066905_100752622	Not Available	841	Open in IMG/M
3300005713\|Ga0066905_101761760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300005764\|Ga0066903_100397520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	2265	Open in IMG/M
3300005764\|Ga0066903_102070392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1095	Open in IMG/M
3300006034\|Ga0066656_10210960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1239	Open in IMG/M
3300006173\|Ga0070716_101171629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	616	Open in IMG/M
3300006175\|Ga0070712_100525694	Not Available	994	Open in IMG/M
3300006176\|Ga0070765_100301439	All Organisms → cellular organisms → Bacteria	1481	Open in IMG/M
3300006177\|Ga0075362_10069673	All Organisms → cellular organisms → Bacteria → Proteobacteria	1604	Open in IMG/M
3300006794\|Ga0066658_10919509	Not Available	505	Open in IMG/M
3300006845\|Ga0075421_100070551	All Organisms → cellular organisms → Bacteria → Proteobacteria	4409	Open in IMG/M
3300006914\|Ga0075436_101443649	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300009089\|Ga0099828_11879059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	525	Open in IMG/M
3300009094\|Ga0111539_10342297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1741	Open in IMG/M
3300009100\|Ga0075418_11243486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300009177\|Ga0105248_12354135	Not Available	607	Open in IMG/M
3300009683\|Ga0116224_10152020	Not Available	1114	Open in IMG/M
3300010040\|Ga0126308_10160416	All Organisms → cellular organisms → Bacteria → Proteobacteria	1426	Open in IMG/M
3300010043\|Ga0126380_10457040	Not Available	967	Open in IMG/M
3300010358\|Ga0126370_11702096	Not Available	607	Open in IMG/M
3300010359\|Ga0126376_11425180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	718	Open in IMG/M
3300010360\|Ga0126372_10140561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1908	Open in IMG/M
3300010362\|Ga0126377_10531282	All Organisms → cellular organisms → Bacteria → Proteobacteria	1212	Open in IMG/M
3300010362\|Ga0126377_12317831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300010366\|Ga0126379_11454475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	791	Open in IMG/M
3300010366\|Ga0126379_13811377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	505	Open in IMG/M
3300010396\|Ga0134126_13004258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300010398\|Ga0126383_10128079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2328	Open in IMG/M
3300010399\|Ga0134127_13083031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300012200\|Ga0137382_10171132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1482	Open in IMG/M
3300012206\|Ga0137380_11496122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	560	Open in IMG/M
3300012361\|Ga0137360_11416883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300012363\|Ga0137390_10324863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1520	Open in IMG/M
3300012363\|Ga0137390_11616982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300012469\|Ga0150984_105544066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300012683\|Ga0137398_11099779	Not Available	547	Open in IMG/M
3300012960\|Ga0164301_10926298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300012971\|Ga0126369_10326329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1547	Open in IMG/M
3300012989\|Ga0164305_12227220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	504	Open in IMG/M
3300014200\|Ga0181526_10251493	Not Available	1127	Open in IMG/M
3300014501\|Ga0182024_10121681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3732	Open in IMG/M
3300014501\|Ga0182024_10458022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1633	Open in IMG/M
3300014657\|Ga0181522_10261725	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300016294\|Ga0182041_10556566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1002	Open in IMG/M
3300017975\|Ga0187782_10771205	Not Available	743	Open in IMG/M
3300018055\|Ga0184616_10397219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300018083\|Ga0184628_10508119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	622	Open in IMG/M
3300018422\|Ga0190265_11911626	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300018476\|Ga0190274_12320671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300019873\|Ga0193700_1053800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	628	Open in IMG/M
3300020001\|Ga0193731_1099767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	749	Open in IMG/M
3300020580\|Ga0210403_10816055	Not Available	741	Open in IMG/M
3300021073\|Ga0210378_10146633	Not Available	912	Open in IMG/M
3300021073\|Ga0210378_10183184	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300021180\|Ga0210396_10492016	Not Available	1074	Open in IMG/M
3300021403\|Ga0210397_10268329	Not Available	1244	Open in IMG/M
3300021407\|Ga0210383_11027063	Not Available	698	Open in IMG/M
3300021420\|Ga0210394_10339566	Not Available	1319	Open in IMG/M
3300021420\|Ga0210394_10406033	Not Available	1198	Open in IMG/M
3300021433\|Ga0210391_11117621	Not Available	612	Open in IMG/M
3300021474\|Ga0210390_11131896	Not Available	634	Open in IMG/M
3300021560\|Ga0126371_10777441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1104	Open in IMG/M
3300024330\|Ga0137417_1408452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4837	Open in IMG/M
3300025627\|Ga0208220_1169376	Not Available	547	Open in IMG/M
3300025915\|Ga0207693_10393188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1084	Open in IMG/M
3300025930\|Ga0207701_10183637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1843	Open in IMG/M
3300025939\|Ga0207665_11140534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300025939\|Ga0207665_11162328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	616	Open in IMG/M
3300025941\|Ga0207711_11627232	Not Available	589	Open in IMG/M
3300025961\|Ga0207712_11179891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300026494\|Ga0257159_1013112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1313	Open in IMG/M
3300027671\|Ga0209588_1142341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	762	Open in IMG/M
3300027684\|Ga0209626_1010228	Not Available	2144	Open in IMG/M
3300027842\|Ga0209580_10661608	Not Available	516	Open in IMG/M
3300027853\|Ga0209274_10208010	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300027874\|Ga0209465_10155005	Not Available	1138	Open in IMG/M
3300027874\|Ga0209465_10474070	Not Available	626	Open in IMG/M
3300028711\|Ga0307293_10109225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	878	Open in IMG/M
3300028754\|Ga0307297_10143067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	812	Open in IMG/M
3300028778\|Ga0307288_10278392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300028809\|Ga0247824_10789247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300029951\|Ga0311371_12126316	Not Available	589	Open in IMG/M
3300030707\|Ga0310038_10023431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3797	Open in IMG/M
3300031184\|Ga0307499_10068172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	912	Open in IMG/M
3300031446\|Ga0170820_12329744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300031561\|Ga0318528_10115669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1415	Open in IMG/M
3300031572\|Ga0318515_10228706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	997	Open in IMG/M
3300031679\|Ga0318561_10419846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	735	Open in IMG/M
3300031681\|Ga0318572_10734512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	588	Open in IMG/M
3300031682\|Ga0318560_10101995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1485	Open in IMG/M
3300031724\|Ga0318500_10324133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	757	Open in IMG/M
3300031724\|Ga0318500_10743369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300031768\|Ga0318509_10232752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1027	Open in IMG/M
3300031777\|Ga0318543_10021475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2421	Open in IMG/M
3300031779\|Ga0318566_10121109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1291	Open in IMG/M
3300031793\|Ga0318548_10079970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1544	Open in IMG/M
3300031795\|Ga0318557_10246634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	818	Open in IMG/M
3300031819\|Ga0318568_10637680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300031845\|Ga0318511_10368521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300031894\|Ga0318522_10035685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1705	Open in IMG/M
3300031910\|Ga0306923_11665631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	660	Open in IMG/M
3300031912\|Ga0306921_10493285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1424	Open in IMG/M
3300032001\|Ga0306922_10411102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1448	Open in IMG/M
3300032008\|Ga0318562_10053529	All Organisms → cellular organisms → Bacteria → Proteobacteria	2219	Open in IMG/M
3300032010\|Ga0318569_10311898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300032044\|Ga0318558_10086303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1451	Open in IMG/M
3300032044\|Ga0318558_10307877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	783	Open in IMG/M
3300032055\|Ga0318575_10101976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1392	Open in IMG/M
3300032063\|Ga0318504_10103146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1279	Open in IMG/M
3300032160\|Ga0311301_10725055	Not Available	1389	Open in IMG/M
3300032205\|Ga0307472_101421090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	674	Open in IMG/M
3300032205\|Ga0307472_102605528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300033550\|Ga0247829_11039818	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300033551\|Ga0247830_10345470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1149	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.15%
Host-Associated	Host-Associated	10.08%
Engineered	Engineered	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.50%
Plants	Host-Associated → Plants	10.08%
Aquatic	Environmental → Aquatic	4.65%
Solid Waste	Engineered → Solid Waste	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.53%
Freshwater	Environmental → Aquatic → Freshwater	3.10%
Sediment	Environmental → Aquatic → Sediment	1.55%
Peat	Environmental → Terrestrial → Peat	0.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.78%
Roots	Host-Associated → Plants → Roots	0.78%
Grass	Engineered → Solid Waste → Grass	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.67%
Loam	Environmental → Terrestrial → Soil → Loam	14.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.10%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.33%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.78%
Composting	Engineered → Solid Waste → Grass → Composting	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.10%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.33%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.55%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.78%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.75%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.10%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.10%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.33%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.55%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.55%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.78%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4NP_01971160	2170459021	Switchgrass, Maize And Mischanthus Litter	MTYRPPDHLERLIAALYQTPPDLIETVKKLVPSVQ
AF_2010_repII_A100DRAFT_10797532	3300000655	Forest Soil	TYRPPDHLARLVTQLYATPPATIEMVKKIVPNLR*
JGI12053J15887_103589612	3300001661	Forest Soil	AEADRLKLDMTYRSPEDLERLVKNLYETPPEMVETVKKLVPAMQ*
JGI24034J26672_100871941	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	LLAEAARMKMDMTYRQPDRLEQLVASLYSTPPAMIETVKKLVPNLQ*
Ga0062595_1002696801	3300004479	Soil	EAARIKMDMTYRPPDHLERLIAALYQTPPALIETVKKLVPSVQ*
Ga0066395_103383362	3300004633	Tropical Forest Soil	MLDEAEKAKIDRTCQPPARLEELVASLYRTPPDMIETVKKVVPNLQ*
Ga0066819_10276762	3300005148	Soil	ALLAEAARMKMDMTYRQPDRLEQLVASLYSTPPAMIETVKKLVPNLQ*
Ga0066684_105106601	3300005179	Soil	KLKLDMTYRSPQDLERLVTNLYETPPDVIETVKRLVPNVQ*
Ga0070658_106968091	3300005327	Corn Rhizosphere	RMKMDMTYRQPDRLEQLVASLYSTPPAMIETVKKLVPNLQ*
Ga0070690_1003132902	3300005330	Switchgrass Rhizosphere	MKMDMTYRQPDRLEQLVASLYSTPPAMIETVKKLVPNLQ*
Ga0070706_1008848241	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	EAARMKMDMTYRQPDRLEQLVASLYSTPPAMIETVKKLVPNLQ*
Ga0070741_117036522	3300005529	Surface Soil	QAEAARMKLDMTYRPPEHLETLVMHLYDTPKETIAELKKIAPTLR*
Ga0070664_1004431211	3300005564	Corn Rhizosphere	AEAARMKMDMTYRQPDRLEQLVASLYSTPPAMIETVKKLVPNLQ*
Ga0070664_1012930252	3300005564	Corn Rhizosphere	AARMKMDMTYRPPDHLERLVTSLYSTPPALIETVKKLVPNLQ*
Ga0070762_105243452	3300005602	Soil	MTYTAPDRLEQLVGKLYETPPAVIEKVKALLPNEK*
Ga0066905_1007526221	3300005713	Tropical Forest Soil	SKIDMTYLPPEHLEQLVASLYRTPPDLIETVKKLVPNLQ*
Ga0066905_1017617602	3300005713	Tropical Forest Soil	ALVGEAARMKMDMTYRSPERLERLVATLYETPPALIETVKKLVPNLQ*
Ga0066903_1003975204	3300005764	Tropical Forest Soil	MTYLPPARLEELVAGLYRIPPDLIESVKKLVPNLQ*
Ga0066903_1020703921	3300005764	Tropical Forest Soil	TYRPPDQLEGLVASLYDTPAVLIETVKKLVPNLQ*
Ga0066656_102109601	3300006034	Soil	AARIKMDMTYRPPDDLQQLVANLYATPPALIETVKKLVPNLQ*
Ga0070716_1011716291	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	EAAKMKMDMTYRPPEELERLVADLYQTPPALIETVKKLVPSLQ*
Ga0070712_1005256941	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	DAEKSRIDMTYLPPERLEQLVASLYRTPPDLIESVKKLVPNLQ*
Ga0070765_1003014395	3300006176	Soil	TYTSPESLEQLVAKLYKTPPALIATVKTILPNEK*
Ga0075362_100696731	3300006177	Populus Endosphere	AARMKMDMTYRQPDRLEQLVASLYSTPPAMIETVKKLVPNLQ*
Ga0066658_109195092	3300006794	Soil	DMTYRPPDHLERLVANLYETPPELIETIKKLVPTLR*
Ga0075421_1000705516	3300006845	Populus Rhizosphere	KMDMTYRPPDHLERLVTSLYSTPPALIETVKKLVPNLQ*
Ga0075436_1014436492	3300006914	Populus Rhizosphere	MLAEAKKMKLDMTYLSPARLEELIESLYRTPPDMIEAVKKLVPNLQ*
Ga0099828_118790591	3300009089	Vadose Zone Soil	AARLKMDMTYRPPDHLEQLIAALYQTPPALIETVKKLVPSVQ*
Ga0111539_103422971	3300009094	Populus Rhizosphere	QADAEKSKMDMTYLPPERLEQLVASLYRTPPDLIETVKKLVPNLQ*
Ga0075418_112434862	3300009100	Populus Rhizosphere	EAARIRMDMTYRPPDHLERLVARLYDTPPAMIETIKKLVPHAE*
Ga0105248_123541352	3300009177	Switchgrass Rhizosphere	YMTYLPPERLDQLVASLYRTPPDLIETVKKLVPNLQ*
Ga0116224_101520203	3300009683	Peatlands Soil	AAIKMDMTYTPPEHLEQLVEKLYQTPPSVIETVKSLLPNEK*
Ga0126308_101604162	3300010040	Serpentine Soil	DVAKDPEMLAEAGKSKIDMTYHSPAHQERLVQSLYQTPPELIEVVKKLVPNLQ*
Ga0126380_104570401	3300010043	Tropical Forest Soil	MLGEAEKGKIDMTYLPPARLEALVASLYRTPPDLIETVKKLVPNLQ*
Ga0126370_117020961	3300010358	Tropical Forest Soil	MQLDAERSKIDMTYLPPERLEQLVANLYRTPPDLIETVKKLVPNLQ*
Ga0126376_114251802	3300010359	Tropical Forest Soil	LDMTFRPPDALERLVANLYETPPAMIETVKKLVPNLQ*
Ga0126372_101405613	3300010360	Tropical Forest Soil	ARIKLDMTYRPPDHLERLVAALYQTPPALIETVKKLVPNVQ*
Ga0126377_105312821	3300010362	Tropical Forest Soil	RIKMDMTYRPPDHLERLVAALYETPPALIETVRKLVPSVQ*
Ga0126377_123178312	3300010362	Tropical Forest Soil	VAEAAKIKLDMTYRPPEHLEGLVAELYDTPPELIETVKKLVPSVQ*
Ga0126379_114544752	3300010366	Tropical Forest Soil	KMDMTYRPPDHLERLVAALYETPPALIETVRKLVPSVQ*
Ga0126379_138113772	3300010366	Tropical Forest Soil	IKLDMTYRPPDHLERLVAALYQTPPALVETVKKLVPSVQ*
Ga0134126_130042581	3300010396	Terrestrial Soil	MDMTYRQPDRLEQLVASLYSTPPAMIETVKKLVPNLQ*
Ga0126383_101280791	3300010398	Tropical Forest Soil	MLDEAEKAKIDMTDLPPARLEELVASLYRTPPDMIETVKKVVPNLQ*
Ga0134127_130830312	3300010399	Terrestrial Soil	RMKMDMTYRPPDHLERLVTSLYSTPPALIETVKKLVPNLQ*
Ga0137382_101711321	3300012200	Vadose Zone Soil	DAEKSKIDMTYLPPERLEQLVASLYRTPPDLIETVKKLVPNLQ*
Ga0137380_114961222	3300012206	Vadose Zone Soil	ADRIKLDMTYRAPDHLERLVANLYETPPALIETVKKLIPNLR*
Ga0137360_114168832	3300012361	Vadose Zone Soil	DMTYRPPDHLERLIAALYQTPPALIETVKKLVPSVQ*
Ga0137390_103248633	3300012363	Vadose Zone Soil	AEAARIKMDMTYRPPDHLERVLASLYETPPALIATVKKLVPSMQ*
Ga0137390_116169821	3300012363	Vadose Zone Soil	KLDMSYRPPHALERLVVQLYEAPPELIETVKKLVPNMQ*
Ga0150984_1055440662	3300012469	Avena Fatua Rhizosphere	LAEATRMKMDMTYRQPDRLEQLVASLYSTPPAMIETVKKLVPNLQ*
Ga0137398_110997791	3300012683	Vadose Zone Soil	LRLDMTYRSPEDLERLVANLYETPPEMVETVKKLVPGLQ*
Ga0164301_109262981	3300012960	Soil	LDMAYHSPAQLEQLVAALYQTPPTMIEAVKKLVPSLD*
Ga0126369_103263294	3300012971	Tropical Forest Soil	MTCLSATRLEELVASLYRTPPDLIETVKKIMPNLQ*
Ga0164305_122272201	3300012989	Soil	SYRAPEHLEQLVVKLYQTPQDVIDAVKKLIPAVQ*
Ga0181526_102514931	3300014200	Bog	MTYTPPDHLEELVGKLYQTPPSVIETIKSLLPNEK*
Ga0182024_101216815	3300014501	Permafrost	MTYTPPEHLERLVAKLYQTPPALIGTVKALLPNMK*
Ga0182024_104580222	3300014501	Permafrost	MALRPSDLLKLDMTYRPPQDLERLVAQLYETPPALIETVKKLVPTLQ*
Ga0181522_102617251	3300014657	Bog	AIKMDMTYTPPDHLEQLVEKLYQTPPAVIETVKSLLPNEK*
Ga0182041_105565661	3300016294	Soil	IKMDMTYRPPDHLERLVAALYETPPALIETVKKLVPSVQ
Ga0187782_107712051	3300017975	Tropical Peatland	ANIKMDMTFTSAESLEQLVVKLYQTPPALIATVKAILPNEK
Ga0184616_103972191	3300018055	Groundwater Sediment	LAEAARMKMDMTYRQPDRLEQLVATLYSTPPAMIETVKKLVPNLQ
Ga0184628_105081192	3300018083	Groundwater Sediment	ALIAEAARMKMDMTYRQPDRLEQLVANLYSTPPAMIETVKKLVPNLQ
Ga0190265_119116261	3300018422	Soil	LDMSFRGPERLEKLVADLYATPPGVIEAVKKLVPNLQ
Ga0190274_123206711	3300018476	Soil	ARMKMDMTYRQPDRLEQLVGSLYSTPPAMIETVKKLVPNLQ
Ga0193700_10538001	3300019873	Soil	MTFRQPDRLEQLVASLYSTTPAMIETVKKLVPNLQ
Ga0193731_10997672	3300020001	Soil	RMKMDMTFRQPDRLEQLVASLYSTTPAMIETVKKLVPNLQ
Ga0210403_108160552	3300020580	Soil	ANIKMDMTYTPPEHLEQLVAKLYQTPPAVIETVKTLLPNEK
Ga0210378_101466331	3300021073	Groundwater Sediment	DPQMQADAEKSKIDMTYLPPERLEQLVASLYRTPPDMIETVKKLVPNLQ
Ga0210378_101831841	3300021073	Groundwater Sediment	DMTYRPADHLERTVAGLYETPPALIETIKKLVPNLQ
Ga0210396_104920163	3300021180	Soil	ATIKMDMTYTAPDRLEQLVEKLYQTPPAVIETVKALLPNEK
Ga0210397_102683293	3300021403	Soil	LVAEAATIKMDMTYTAPDRLEQLVEKLYQTPPAVIETVKALLPNEK
Ga0210383_110270631	3300021407	Soil	KMDMTFTPADRLEQLVAKLYQTPPGVIETVKSLLPNEK
Ga0210394_103395663	3300021420	Soil	EADRLKLDMTYRSPQDLERLVANLYETPPEMVETVKKLVPGLQ
Ga0210394_104060333	3300021420	Soil	SIKMDMTYTPPEHLEQLVAKLYQTPPAVIETVKALLPNEK
Ga0210391_111176211	3300021433	Soil	KMDMTYAPPDRLEQLVANLYQTPPSVIETVKSLLPNEK
Ga0210390_111318961	3300021474	Soil	TIKMDMTYTAPDRLEQLVEKLYQTPPAVIETVKALLPNEK
Ga0126371_107774411	3300021560	Tropical Forest Soil	KIKLDMTYRPREHLEGLVAALYDTPPELIETVKKLVPSVQ
Ga0137417_14084523	3300024330	Vadose Zone Soil	MTYRPPDDLTRLVADLYDTAPALIATVKKLVPNLQ
Ga0208220_11693762	3300025627	Arctic Peat Soil	GLDMTYTPPETLEQLVAKLFQTPPALVATVRSILPNEK
Ga0207693_103931883	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	DAEKSRIDMTYLPPERLEQLVASLYRTPPDLIESVKKLVPNLQ
Ga0207701_101836374	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	DMTYRQPDRLEQLVASLYSTPPAMIETVKKLVPNLQ
Ga0207665_111405342	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	ARLKMDMTYRPPDHLERLIAALYQTPPALIETVKKLVPSVQ
Ga0207665_111623282	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	EAAKMKMDMTYRPPEELERLVADLYQTPPALIETVKKLVPSLQ
Ga0207711_116272322	3300025941	Switchgrass Rhizosphere	YMTYLPPERLDQLVASLYRTPPDLIETVKKLVPNLQ
Ga0207712_111798911	3300025961	Switchgrass Rhizosphere	AEAARMKMDMTYRQPDRLEQLVASLYSTPPAMIETVKKLVPNLQ
Ga0257159_10131123	3300026494	Soil	LKMDMTYRPPDHLEQLIAALYQTPPALIETVKKLVPSVQ
Ga0209588_11423412	3300027671	Vadose Zone Soil	CSYRPPDHLEQLIAALYQTPPALIETVKKLVPSVQ
Ga0209626_10102284	3300027684	Forest Soil	ASIKMDMTYTPPEHLEQLVTKLYQTPPAVIETVKALLPNEK
Ga0209580_106616082	3300027842	Surface Soil	DMTYTPPDRLEQLVAKLYQTPPAVIETVKALLPNEK
Ga0209274_102080103	3300027853	Soil	AASIKMDMTYTPPDHLDELIGKLYQTPPSVIEAVKSLLPNEK
Ga0209465_101550051	3300027874	Tropical Forest Soil	MLDEAEKAKIDRTCQPPARLEELVASLYRTPPDMIETVKKVVPNLQ
Ga0209465_104740702	3300027874	Tropical Forest Soil	EAAKMKMDMSYRPPDLLKRLVAQIYETPPDLIETVKKLVPTQQ
Ga0307293_101092251	3300028711	Soil	RMKMDMTYRQPDRLEQLVASLYSTTPAMIETVKKLVPNLQ
Ga0307297_101430672	3300028754	Soil	TEAARMKMDMTYRQPDRLEQLVANLYSTPPAMIETVKKLVPNLQ
Ga0307288_102783921	3300028778	Soil	AARMKMDMTYRQPDRLEQLVASLYSTTPAMIETVKKLVPNLQ
Ga0247824_107892471	3300028809	Soil	MKMDMTYRQPDRLEQLVASLYSTPPAMIETVKKLVPNLQ
Ga0311371_121263161	3300029951	Palsa	MDMTYTSPDQLEQLVAALYKTPPSVIESVKALLPGEK
Ga0310038_100234316	3300030707	Peatlands Soil	MTYTPPEQLEQLVAKLYETPPAVIETVKSLLPNEK
Ga0307499_100681722	3300031184	Soil	ALLAEATRMKMDMTYRQPDRLEQLVASLYSTPPAMIETVKKLVPNLQ
Ga0170820_123297442	3300031446	Forest Soil	AIRMKMDMTYRQPDRLEQLVASLYSTPPAMIETVKKLVPNLQ
Ga0318528_101156693	3300031561	Soil	MTYRPPDHLERLVAALYETPPALIETVKKLVPSVQ
Ga0318515_102287062	3300031572	Soil	DMTYRPPDHLERLVAALYQTPPALIETVKKLVPSVQ
Ga0318561_104198462	3300031679	Soil	VAEAAKLKIDMTFRPPQRLEQLVAHLYETPQPLIETVRKLVPSVQ
Ga0318572_107345121	3300031681	Soil	MDMTYRSPDHLERLVAALYQTPPALIETVKKLVPSVQ
Ga0318560_101019951	3300031682	Soil	EAARIKMDMTYRPPDHLERLVAALYETPPALIETVKKLVPSVQ
Ga0318500_103241332	3300031724	Soil	MTYRSPDHLERLVAALYQTPPALIETVKKLVPSVQ
Ga0318500_107433691	3300031724	Soil	DMTYRSPDHLERLVAALYQTPPALIETVKKLVPSVQ
Ga0318509_102327521	3300031768	Soil	NLVAEAARIKMDMTYRSPDHLERLVAALYQTPPALIETVKKLVPSVQ
Ga0318543_100214751	3300031777	Soil	LAEAARIKMDMTYRPPDHLERLVAALYETPPALIETVKKLVPSVQ
Ga0318566_101211093	3300031779	Soil	KMDMTYRPPDHLERLIAALYQTPPTLIETVKKLVPSVQ
Ga0318548_100799701	3300031793	Soil	DMTYRPPDHLERLIAALYQTPPTLIETVKKLVPSVQ
Ga0318557_102466341	3300031795	Soil	VAEAAKLKIDMTFRPPQRLEQLVARLYETPQPLIETVRKLVPSVQ
Ga0318568_106376802	3300031819	Soil	IKLDMSYRPPDALERLVAQLYDAPAELIDTVKKLVPSIQ
Ga0318511_103685212	3300031845	Soil	MDMTYRPPDHLERLVAALYQTPPALIETVKKLVPSVQ
Ga0318522_100356853	3300031894	Soil	MTYRPPDHLERLVAALYQTPPALIETVKKLVPNVQ
Ga0306923_116656312	3300031910	Soil	DVTYRPPDHLERLVAALYQTPPALIETVRKLVPSVQ
Ga0306921_104932851	3300031912	Soil	IKMDMTYRPPDHLERLVAALYQTPPALIETVKKLVPSVQ
Ga0306922_104111021	3300032001	Soil	KMDMTYRPPDHLERLVAALYQTPPALIETVKKLVPSVQ
Ga0318562_100535291	3300032008	Soil	AARIKLDMTYRSPDHLERLVAALYQTPPALVETVKKLVPSVQ
Ga0318569_103118982	3300032010	Soil	EAARIKMDMTYRPPDHLERLIAALYQTPPTLIETVKKLVPSVQ
Ga0318558_100863033	3300032044	Soil	ELLAEAARIKMDMTYRPPDHLERLVAALYETPPALIETVKKLVPSVQ
Ga0318558_103078771	3300032044	Soil	IKMDVTYRPPDHLERLVAALYQTPPALIETVRKLVPSVQ
Ga0318575_101019763	3300032055	Soil	ARIKMDMTYRPPDHLERLIAALYQTPPTLIETVKKLVPSVQ
Ga0318504_101031463	3300032063	Soil	DMTYRPPDHLERLVAALYQTPPALIETVRKLVPSVQ
Ga0311301_107250551	3300032160	Peatlands Soil	DMTYTPPEHLEQLVAKLYQTPPAVIETVKALLPNEK
Ga0307472_1014210901	3300032205	Hardwood Forest Soil	MDMTYRQPDRLEQLVASLYSTPPAMIETVKKLVPNLQ
Ga0307472_1026055281	3300032205	Hardwood Forest Soil	VGEAARMKMDMTYRSPEQLEQRVTALYETPPALIETVKKLVPNLQ
Ga0247829_110398181	3300033550	Soil	DMTHRPADHLERTVAGLYETPPALIETIKRLVPNLQ
Ga0247830_103454701	3300033551	Soil	LIAEAARMKMDMTYRPPDHLERLVTSLYSTPPALIETVKKLVPNLQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063988

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences