Metagenome / Metatranscriptome Family F063969

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063969
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	68 residues
Representative Sequence	VDPTGGGEVLAGVFLALRADGLPERRALRYAVRAAASCVADYGVTGSHLTAELEAIRRETGEYRPG
Number of Associated Samples	122
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.33 %
% of genes near scaffold ends (potentially truncated)	97.67 %
% of genes from short scaffolds (< 2000 bps)	93.80 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.543 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (19.380 % of family members)
Environment Ontology (ENVO)	Unclassified (25.581 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.434 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.13% β-sheet: 0.00% Coil/Unstructured: 47.87%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00270	DEAD	40.31
PF00271	Helicase_C	18.60
PF00294	PfkB	6.98
PF07690	MFS_1	1.55
PF05721	PhyH	1.55
PF00463	ICL	0.78
PF03176	MMPL	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.55
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.78
COG2224	Isocitrate lyase	Energy production and conversion [C]	0.78
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.54 %
Unclassified	root	N/A	29.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.54 %
Unclassified	root	N/A	29.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.54 %
Unclassified	root	N/A	29.46 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	56.59 %
Unclassified	root	N/A	29.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.55 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	55.81 %
Unclassified	root	N/A	29.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	53.49 %
Unclassified	root	N/A	29.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.46 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	17.83 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.10 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.83 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.10 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.78 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.83 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.10 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.78 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.83 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.78 %
unclassified Micromonospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora	0.78 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.83 %
Micromonospora sp. MH33	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. MH33	0.78 %
Streptomyces sp. FR-008	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. FR-008	0.78 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003218\|JGI26339J46600_10020354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1927	Open in IMG/M
3300004479\|Ga0062595_101806063	Not Available	581	Open in IMG/M
3300005329\|Ga0070683_100293738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1546	Open in IMG/M
3300005332\|Ga0066388_101218950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1288	Open in IMG/M
3300005337\|Ga0070682_100327161	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300005343\|Ga0070687_100138400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1414	Open in IMG/M
3300005344\|Ga0070661_100183757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1592	Open in IMG/M
3300005441\|Ga0070700_100471175	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300005458\|Ga0070681_10300979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1513	Open in IMG/M
3300005466\|Ga0070685_10622840	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300005530\|Ga0070679_100161589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2214	Open in IMG/M
3300005535\|Ga0070684_102016901	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005543\|Ga0070672_101445069	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300005544\|Ga0070686_100142172	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300005574\|Ga0066694_10494302	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005576\|Ga0066708_10573615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	725	Open in IMG/M
3300005614\|Ga0068856_101970572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	595	Open in IMG/M
3300005615\|Ga0070702_100548782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	857	Open in IMG/M
3300005841\|Ga0068863_101305514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	732	Open in IMG/M
3300006028\|Ga0070717_11669457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	577	Open in IMG/M
3300006034\|Ga0066656_10667066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	670	Open in IMG/M
3300006173\|Ga0070716_101791930	Not Available	508	Open in IMG/M
3300006175\|Ga0070712_100052128	All Organisms → cellular organisms → Bacteria	2852	Open in IMG/M
3300006800\|Ga0066660_10157417	All Organisms → cellular organisms → Bacteria	1690	Open in IMG/M
3300006854\|Ga0075425_101621797	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300006914\|Ga0075436_100174746	All Organisms → cellular organisms → Bacteria	1517	Open in IMG/M
3300009012\|Ga0066710_101172802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1189	Open in IMG/M
3300009092\|Ga0105250_10059533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1534	Open in IMG/M
3300009174\|Ga0105241_10851358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	843	Open in IMG/M
3300009177\|Ga0105248_10238450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2047	Open in IMG/M
3300009520\|Ga0116214_1362978	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300009683\|Ga0116224_10359023	Not Available	693	Open in IMG/M
3300010048\|Ga0126373_12622679	Not Available	562	Open in IMG/M
3300010341\|Ga0074045_10813583	Not Available	590	Open in IMG/M
3300010376\|Ga0126381_104808545	Not Available	519	Open in IMG/M
3300010861\|Ga0126349_1087030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1816	Open in IMG/M
3300011120\|Ga0150983_13797500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1025	Open in IMG/M
3300012203\|Ga0137399_10225797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1529	Open in IMG/M
3300012209\|Ga0137379_11649558	Not Available	539	Open in IMG/M
3300012350\|Ga0137372_10256128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. FR-008	1374	Open in IMG/M
3300012359\|Ga0137385_10245923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1550	Open in IMG/M
3300012483\|Ga0157337_1003263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	972	Open in IMG/M
3300012915\|Ga0157302_10579562	Not Available	500	Open in IMG/M
3300012916\|Ga0157310_10350402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	597	Open in IMG/M
3300012975\|Ga0134110_10455277	Not Available	576	Open in IMG/M
3300014968\|Ga0157379_12667198	Not Available	501	Open in IMG/M
3300016294\|Ga0182041_10317772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1297	Open in IMG/M
3300016294\|Ga0182041_10874595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	807	Open in IMG/M
3300016294\|Ga0182041_10981635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	763	Open in IMG/M
3300016341\|Ga0182035_10645731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	918	Open in IMG/M
3300016387\|Ga0182040_11669577	Not Available	543	Open in IMG/M
3300016422\|Ga0182039_10827509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	823	Open in IMG/M
3300016445\|Ga0182038_11703749	Not Available	568	Open in IMG/M
3300017947\|Ga0187785_10745622	Not Available	517	Open in IMG/M
3300018035\|Ga0187875_10303221	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300018038\|Ga0187855_10491443	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300018044\|Ga0187890_10792484	Not Available	536	Open in IMG/M
3300018482\|Ga0066669_11021345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	746	Open in IMG/M
3300019999\|Ga0193718_1074932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	720	Open in IMG/M
3300020004\|Ga0193755_1138366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	748	Open in IMG/M
3300020075\|Ga0206349_1643222	Not Available	1117	Open in IMG/M
3300021402\|Ga0210385_11180171	Not Available	588	Open in IMG/M
3300021404\|Ga0210389_11162001	Not Available	595	Open in IMG/M
3300021405\|Ga0210387_10250947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1548	Open in IMG/M
3300021474\|Ga0210390_11489906	Not Available	536	Open in IMG/M
3300021479\|Ga0210410_10124041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2291	Open in IMG/M
3300022467\|Ga0224712_10133812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1085	Open in IMG/M
3300022756\|Ga0222622_10585738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	804	Open in IMG/M
3300024275\|Ga0247674_1049891	Not Available	507	Open in IMG/M
3300024283\|Ga0247670_1014563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1416	Open in IMG/M
3300025898\|Ga0207692_10139558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1378	Open in IMG/M
3300025905\|Ga0207685_10415361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	693	Open in IMG/M
3300025906\|Ga0207699_10583086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	813	Open in IMG/M
3300025922\|Ga0207646_11662621	Not Available	549	Open in IMG/M
3300025922\|Ga0207646_11907836	Not Available	506	Open in IMG/M
3300025928\|Ga0207700_10681346	Not Available	917	Open in IMG/M
3300025929\|Ga0207664_11892672	Not Available	519	Open in IMG/M
3300025932\|Ga0207690_10410761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. MH33	1081	Open in IMG/M
3300025937\|Ga0207669_10142373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1667	Open in IMG/M
3300025939\|Ga0207665_10061884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2539	Open in IMG/M
3300025940\|Ga0207691_10470062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1069	Open in IMG/M
3300025986\|Ga0207658_11783022	Not Available	562	Open in IMG/M
3300026498\|Ga0257156_1010937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1732	Open in IMG/M
3300027119\|Ga0209522_1015739	All Organisms → cellular organisms → Bacteria → Terrabacteria group	858	Open in IMG/M
3300027307\|Ga0209327_1004106	All Organisms → cellular organisms → Bacteria	1623	Open in IMG/M
3300027725\|Ga0209178_1369723	Not Available	540	Open in IMG/M
3300027787\|Ga0209074_10388391	Not Available	582	Open in IMG/M
3300028138\|Ga0247684_1012095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1350	Open in IMG/M
3300028791\|Ga0307290_10092350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1103	Open in IMG/M
3300028877\|Ga0302235_10026102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3076	Open in IMG/M
3300029943\|Ga0311340_10450114	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300029999\|Ga0311339_10984399	Not Available	792	Open in IMG/M
3300031572\|Ga0318515_10273527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	906	Open in IMG/M
3300031616\|Ga0307508_10827956	Not Available	545	Open in IMG/M
3300031680\|Ga0318574_10534026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	687	Open in IMG/M
3300031713\|Ga0318496_10183625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1147	Open in IMG/M
3300031713\|Ga0318496_10598124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	609	Open in IMG/M
3300031719\|Ga0306917_10975562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	662	Open in IMG/M
3300031744\|Ga0306918_10338282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1166	Open in IMG/M
3300031747\|Ga0318502_10465527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	755	Open in IMG/M
3300031782\|Ga0318552_10236950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	925	Open in IMG/M
3300031794\|Ga0318503_10214494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300031798\|Ga0318523_10077620	Not Available	1604	Open in IMG/M
3300031845\|Ga0318511_10254476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	788	Open in IMG/M
3300031879\|Ga0306919_10318126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1184	Open in IMG/M
3300031880\|Ga0318544_10392453	Not Available	539	Open in IMG/M
3300031910\|Ga0306923_12498314	Not Available	509	Open in IMG/M
3300031938\|Ga0308175_101772175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691	Open in IMG/M
3300031939\|Ga0308174_11149267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300032043\|Ga0318556_10131560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1284	Open in IMG/M
3300032044\|Ga0318558_10563346	Not Available	569	Open in IMG/M
3300032055\|Ga0318575_10349624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	749	Open in IMG/M
3300032060\|Ga0318505_10236309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	859	Open in IMG/M
3300032065\|Ga0318513_10208291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	943	Open in IMG/M
3300032066\|Ga0318514_10191732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1069	Open in IMG/M
3300032076\|Ga0306924_10401429	Not Available	1569	Open in IMG/M
3300032770\|Ga0335085_10680322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1147	Open in IMG/M
3300032805\|Ga0335078_12015886	Not Available	617	Open in IMG/M
3300032805\|Ga0335078_12408903	Not Available	547	Open in IMG/M
3300032828\|Ga0335080_12230415	Not Available	526	Open in IMG/M
3300032829\|Ga0335070_10136054	Not Available	2519	Open in IMG/M
3300032897\|Ga0335071_10172734	Not Available	2114	Open in IMG/M
3300032897\|Ga0335071_11354537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	656	Open in IMG/M
3300032954\|Ga0335083_10346605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1287	Open in IMG/M
3300032954\|Ga0335083_10505569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1011	Open in IMG/M
3300032955\|Ga0335076_10629267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	955	Open in IMG/M
3300033475\|Ga0310811_11204739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	622	Open in IMG/M
3300034817\|Ga0373948_0102773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
3300034819\|Ga0373958_0075451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	755	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.05%
Host-Associated	Host-Associated	13.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.17%
Plants	Host-Associated → Plants	13.95%
Aquatic	Environmental → Aquatic	3.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.85%
Freshwater	Environmental → Aquatic → Freshwater	3.10%
Peat	Environmental → Terrestrial → Peat	2.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.33%
Sediment	Environmental → Aquatic → Sediment	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.16%
Loam	Environmental → Terrestrial → Soil → Loam	19.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.30%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.10%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.28%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.10%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.30%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.30%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.10%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.33%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.33%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.55%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.55%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.55%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.78%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010861	Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012483	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.yng.040610	Host-Associated	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024275	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK15	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027119	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027307	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26339J46600_100203541	3300003218	Bog Forest Soil	LAGVFLALRAAGQPEREALKYAVRAATSCVADYGVAGPHLTAELEAIRREVRA*
Ga0062595_1018060632	3300004479	Soil	VFLALRAEGLPEREALRYAVRASASCVEDYGVTGSRLTAELGTIRGEVLASAGS*
Ga0070683_1002937381	3300005329	Corn Rhizosphere	VDPTGGGEVLAGVFLALRAEGLPEREALRYAVRASASCVEDYGVTGEHLTTELKAIALEAIRDRECDAG*
Ga0066388_1012189501	3300005332	Tropical Forest Soil	VDPTGDGEVLAGVFLALRTEGLPERTALKYAVRAAAGCVADYGVTGSHLTAELRAIRCETASSGEYSVSR*
Ga0070682_1003271612	3300005337	Corn Rhizosphere	AQLVDPTGGGEVLAGVFLALRADGLPERLALRYAVRAASSCVADFGVTGSHLIAELEAIRNETREYQPG*
Ga0070687_1001384001	3300005343	Switchgrass Rhizosphere	GGEVLAGVFLALRRDGLPERLALRYAVRAASRCVADYGVTGSHLIAELEAIRNETREYQPG*
Ga0070661_1001837571	3300005344	Corn Rhizosphere	GGGEVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVTGSHLIAELEAIRNETGEYQPG*
Ga0070700_1004711751	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	PVAQLVDPTGGGEVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVTGPHLIAELEAIRNETGEYQPG*
Ga0070681_103009791	3300005458	Corn Rhizosphere	EVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVTGPHLIAELEAIRNETGEYQPG*
Ga0070685_106228402	3300005466	Switchgrass Rhizosphere	HPQEVEAPVAQLVDPTGGGEVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVTGSHLIAELEAIRNETGEYQPG*
Ga0070679_1001615893	3300005530	Corn Rhizosphere	GGEVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVTGPHLIAELEAIRNETGEYQPG*
Ga0070684_1020169012	3300005535	Corn Rhizosphere	VDPTGGGEVLAGVFLALRAEGLPEREALRYAVRASASCVEDYGVTGSRLTAELAAIALEAIPYGEFEGS*
Ga0070672_1014450692	3300005543	Miscanthus Rhizosphere	TGGGEVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVTGSHLIAELEAIRNETGEYQPG*
Ga0070686_1001421722	3300005544	Switchgrass Rhizosphere	EAPVAQLVDPTGGGEVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVTGSHLIAELEAIRNETGEYQPG*
Ga0066694_104943022	3300005574	Soil	DPTGGGEVLAGVFLALRADGLPERRALKYAVRAAASCVADYGVTGSHLTAELEVIRRETGEYRPG*
Ga0066708_105736151	3300005576	Soil	FLALRADGLPERRALSYAVRAAASCVADYGVTGSHLTAELEAIRRETGEYRPG*
Ga0068856_1019705722	3300005614	Corn Rhizosphere	PTGGGEVLAGVFLALRAEGLPEREALRYAVRASASCVEDYGVTGEHLTAELKAIALEAIPHGEYEGS*
Ga0070702_1005487821	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GGEVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVTGSHLIAELEAIRNETGEYQPG*
Ga0068863_1013055142	3300005841	Switchgrass Rhizosphere	GEVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVTGSHLIAELEAIRNETGEYQPG
Ga0070717_116694571	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GGGEVLAGVFLALRADGLPERAALKYAARASASCVADYGVTGSHLTAELDAIRREVVGTA
Ga0066656_106670662	3300006034	Soil	GEVLAGVFLALRADGLPERRALKYAVRAAAACVADYGVTGSHLTAELEVIRVETGNGGEYQPG*
Ga0070716_1017919301	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	PQLVDPTGGGEVLAGVFLALRAEGLPERTALKYAVRAAASCAADYGVTGAYLTAELEVIRREAGEYSPG*
Ga0070712_1000521281	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	DPTGGGEVLAGVFLALRADGLPERAALKYAARASASCVADYGVTGSHLTAELDAIRREVVGTA*
Ga0066660_101574172	3300006800	Soil	DPTGGGEVLAGVFLALRADGLPERRALKYAVRAAAACVADYGVTGSYLTAELEVIRVEAGNGGEYQPG*
Ga0075425_1016217972	3300006854	Populus Rhizosphere	VDPTGGGEVLAGVFLALRAEGLPEREALRYAVRGSASCVEDYGVTGSHLTAELETIRGEVLGSAGS*
Ga0075436_1001747461	3300006914	Populus Rhizosphere	TGGGEVLAGVFLALRADGLPERRALKYAVRAAAACVADYGVTGSHLTAELEVIRVEAGNGGEYQPG*
Ga0066710_1011728022	3300009012	Grasslands Soil	GGGEVLAGVFLALRADGLPERRALSYAVRAAASCVADYGVTGSHLTAELEAIRRETGEYRPG
Ga0105250_100595331	3300009092	Switchgrass Rhizosphere	GGEVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVTGSHLTAELEAIRNETGEYQPG*
Ga0105241_108513581	3300009174	Corn Rhizosphere	PRVVDPTGGGEVLAGVFLALRAEELPEREALRYAVRASASCVEDYGVTGEHLTAELKAIAAEAIRDRECDTD*
Ga0105248_102384501	3300009177	Switchgrass Rhizosphere	FGARLIVDGHPQEEEAPVAQLVDPTGGGEVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVTGPHLIAELEAIRNETGEYQPG*
Ga0116214_13629781	3300009520	Peatlands Soil	GEILAGVFLALRAQGQSERAALKYAVRAATSCVADYGVTGPHLTAELEAIRREVTGAATS
Ga0116224_103590232	3300009683	Peatlands Soil	VFLALRAEGQPERAALKYAVRAATSCVADYGVTGPHLTAELQAIRREVTGAAAS*
Ga0126373_126226791	3300010048	Tropical Forest Soil	PSGSGEVLAAVFLALRSEGLPERMALTYAARAAASCAADYGVTGAHLTAELEAIRLDIGSGGEYRAG*
Ga0074045_108135832	3300010341	Bog Forest Soil	LALRAEGQSERAALKYAVRAATSCVADYGVTGPHLTAELQAIRREVTGASPSASGSR*
Ga0126381_1048085452	3300010376	Tropical Forest Soil	EAAVPHVVDPAGGGEVLAGVFLALRTEGLPERMALKCAVRAAANCVADYGVTGSHLTAELEAIRCETASSGEYSVGR*
Ga0126349_10870302	3300010861	Boreal Forest Soil	LALRADGLPERRALRYAVRAAAACVADYGVTGSHLTAELQVIRVEAGNEGEYQPG*
Ga0150983_137975001	3300011120	Forest Soil	PTGAGEVLAGAFLALRADGLPERTALRYAVRAAAGCVADYGVTGSHLAAELEVIRIEAGSAGEYQTG*
Ga0137399_102257972	3300012203	Vadose Zone Soil	FLALRADGLPERLALRYAVRAAASCVADYGVTGSHLTAELEAIRRETGEYRPG*
Ga0137379_116495582	3300012209	Vadose Zone Soil	AGVFLALRADGLPEREALRYAARASASCVADYGVTGSHLTAELEAIRREVLSPAAS*
Ga0137372_102561281	3300012350	Vadose Zone Soil	GPSGARLLVDGHPQEVEAPAPRVLDLAGGGEVLAGVFLALRADGLPERVALKYAARASASSVEDYGVTGSHLTTELDTIGREVLGTG*
Ga0137385_102459232	3300012359	Vadose Zone Soil	VDPTGGGEVLAGVFLALRADGLPERRALRYAVRAAASCVADYGVTGSHLTAELEAIRRETGEYRPG*
Ga0157337_10032631	3300012483	Arabidopsis Rhizosphere	AQLVDPTGGGEVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVTGSQLTAELEVIRVEAGNDGEYQPG*
Ga0157302_105795621	3300012915	Soil	PTGGGEILAGVFLALRADGLPERRALRYAVRAASACVADYGVTGSHLIAELEAIRNETGEYQPG*
Ga0157310_103504022	3300012916	Soil	GVFLALRADGLPERRALRYAVRAASACVADYGVTGSHLIAELEAIRNETGEYQPG*
Ga0134110_104552772	3300012975	Grasslands Soil	GGGEVLAGVFLALRADGLPERRALRYAVRAASSCVADYGVTGSRLIAELEAIRNETGEYQPG*
Ga0157379_126671981	3300014968	Switchgrass Rhizosphere	APAQVVDPTGGGEILAGVFLALRVHGLPERKALQYAVRAATSCVADYGVTGSHLTAELEVIRVEAGNAGE*
Ga0182041_103177722	3300016294	Soil	VKRGPAGARLVVDGHPQEVEAVVPRLVDPAGGGEVLVGVFLALRADGLPERVALKYAVRAAASSAADHGVTGSHLTAELEAIRQETGEYRPG
Ga0182041_108745952	3300016294	Soil	DGHPQEVEAAVPHVVDPTGDGEVLAGVFLALRTEGLPERTALTYAVRAAASCVADYGVTGSHLTAELEAIRCETASTGEYSVSR
Ga0182041_109816351	3300016294	Soil	VDGHPQEVEAPVPQLVDPIGSGEVLAGVFLALRAEGLPERTALKYAVGAAASCVADYGVTGSHLTAELEAIRLDTGTGGEYQAG
Ga0182035_106457312	3300016341	Soil	VLLDADIGRQHPGQEHRPPLPRLADPAGSGEVLAGVFLALRAEGLPERTALKYAVGAAASCVADYGVTGSHLTAELEAIRLDTGTGGEYQAG
Ga0182040_116695771	3300016387	Soil	GVFLALRAEGLPERTALKYAVRAAASCAADYGVTGAHLNAELAAIRRETGEYSPG
Ga0182039_108275092	3300016422	Soil	SGEVLAGVFLALRAEGLPERTALKYAVGAAASCVADYGVTGSHLTAELEAIRLDTGTGGEYQAG
Ga0182038_117037491	3300016445	Soil	PQLVDTTGGGEVLAGVFLALRADGLPERLALRYAVRAAASSAADYGVTGAYLTAELKAIRRETASDGEYRAG
Ga0187785_107456221	3300017947	Tropical Peatland	LIVDGHPQEVEAAVPHVVDTAGAGEVLAGVFLALRTEGLPERLALKCAVRAAASCVADYGVTGSHLAADLEAIRCETASSGEYSVGR
Ga0187875_103032211	3300018035	Peatland	PTGGGEILAGVFLALRAHGQPAGEALKYAVRAATSCVADYGVTGPHLAAELAAIRRELTGVPAA
Ga0187855_104914432	3300018038	Peatland	GVFLALRAHGQPAGEALKYAVRAATSCVADYGVTGPHLAAELAAIRRELTGVPAA
Ga0187890_107924842	3300018044	Peatland	GGEVLAGVFLALLTNGLPEREALKYAVRASASCVADYGVTGAHLTAELKAIREEAGW
Ga0066669_110213451	3300018482	Grasslands Soil	QEVEAAAPQMVDPTGGGEVLAGVFLALRAEGLPEREALRYAVRASASCVEDYGVTGSHLTAELEAIALETIRNREYEAG
Ga0193718_10749322	3300019999	Soil	GPFGARLIVDGHPQEVEAPVAELVDPTGGGEVLAGVFLALRAGGLPERRALRYAVRAASSCVADYGVTGSRLIAELEAIRNEIGEYQPG
Ga0193755_11383661	3300020004	Soil	VDPTGGGEVLAGVFLALRADGLPERRALRYAVRAASSCVADYGVTGSHLIAELEAIRNETGEYQPG
Ga0206349_16432222	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	VDPTGGGEVLAGVFLALRADGLPERRALRYAVRAASSCVADYGVTGSHLIAELEAIRNETREYQPG
Ga0210385_111801712	3300021402	Soil	SGARPIVDGHPQEVEAAVPKLVDPTGGGEVLAGVFLALRADGLPERRALKYAVRAAAACVADYGVTGSYLTAELEVIRVEAGNGGEYQPG
Ga0210389_111620011	3300021404	Soil	VDGHPQEVEAVVPQLVDPTGSGEVLAGVFLALRAEGLPERAALKYAARAAASCAADYGVTGAYLTAELEAIRREAGESICR
Ga0210387_102509472	3300021405	Soil	FLALRAEGLPERTALKHAVRAAASCAADYGVTGAYLTAELEVIRREAGEYSPG
Ga0210390_114899061	3300021474	Soil	VDGHPQEVEAVVPELVDPTGGGEVLAGVFLALRADGLPERTALRYAVRAAAGCVADYGVTGSHLAAELEVIRIEAGSAGEYQTG
Ga0210410_101240412	3300021479	Soil	VAQFVDPTGGGEVLAGVFLALRADGLPERRALKYAVRAAAACVADYGVTGSYLTAELEVIRVEAGNGGEYQPG
Ga0224712_101338121	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	HPQEVEAPVAQLVDPTGCGEVLAGVFLALRANGLPERRALRYAVRAASSCVADYGVTGSRLIAELEAIRNEIGEYQPG
Ga0222622_105857382	3300022756	Groundwater Sediment	FLALRADGLPERRALRYAVRAASSCVADYGVTGSHLIAELEAIRNETGEYQPG
Ga0247674_10498911	3300024275	Soil	TGGGEVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVTGPHLIAELEAIRNETGEYQPG
Ga0247670_10145632	3300024283	Soil	VDPTGGGEVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVTGSHLIAELEAIRNETGEYQPG
Ga0207692_101395581	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	EVLAGVFLALRADGLPERAALKYAARASASCVADYGVTGSHLTAELDAIRREVVGTA
Ga0207685_104153612	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	QFVDPTGGGEVLAGVFLALRADGLPERRALKYAVRAAAACVADYGVTGSHLTAELEVIRVEAGNGGEYQPG
Ga0207699_105830862	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	GHPQEVEAPVAQLVDPTGGGEVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVTGPHLIAELEAIRNETGEYQPG
Ga0207646_116626211	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	GGGEVLAGVFLALRADGLPERRALKYAVRAAAACVADYGVTGSHLTAELEVIRVEAGNGREYQAG
Ga0207646_119078362	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VLAGAFLALRADGLPERTALRYAVRAAAGCVADYGVTGSHLAAELEVIRIEAGSAGEYQT
Ga0207700_106813462	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	TGGGEVLAGVFLALRADGLPERRALKYAVRAAAACVADYGVTGSYLTAELEVIRVEAGNGGEYQPG
Ga0207664_118926721	3300025929	Agricultural Soil	PVAQFVDPTGGGEVLAGVFLALRADGLPERRALKYAVRAAAACVADYGVTGSHLTAELEVIRVEAGNAGE
Ga0207690_104107612	3300025932	Corn Rhizosphere	GHPQEVEAPVAQLVDPTGGGEVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVTGSHLIAELEAIRNETGEYQPG
Ga0207669_101423732	3300025937	Miscanthus Rhizosphere	GHPQEVEAPVAQLVDPTGGGEVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVTGSHLIAELEAIRNETREYQPG
Ga0207665_100618843	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VDPTGGGEVLAGVFLALRADGLPERAALKYAARASASCVADYGVTGSHLTAELDAIRREVVGTA
Ga0207691_104700622	3300025940	Miscanthus Rhizosphere	PVAQLVDPTGGGEVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVTGSHLIAELEAIRNETGEYQPG
Ga0207658_117830221	3300025986	Switchgrass Rhizosphere	EAPVAQFVDPTGGGEVLAGVFLALRADGLPERRALKYAVRAAAACVADYGVTGSHLTAELEVIRVEAGNAGE
Ga0257156_10109372	3300026498	Soil	EVEAPAAQLVDPTGGGEVLAGVFLALRADGLPERRALRYAVRAAASCVADYGVTGSHLTAELEAIRRETGEYRPG
Ga0209522_10157391	3300027119	Forest Soil	IVDGHPQEVEAVVPELVGPTGGGEVLAGVFLALRAEGLPERTALKHAVRAAASCAADYGVTGAYLTAELEVIRREAGEYSPG
Ga0209327_10041062	3300027307	Forest Soil	MTGPAEYPGGVRADGLPERLALRYAVRAASSCVADYGVTGAYLTAELEVIRREAGEYSPG
Ga0209178_13697231	3300027725	Agricultural Soil	ETAAPQVVDPTGGGEVLAGVFLALRAEGLPEREALRYAVRASASCVEDYGVTGEHLTAELKAIAAEAIRDRECDAG
Ga0209074_103883911	3300027787	Agricultural Soil	TAPQVVDPTGGGEVLAGVFLALRAEGLPEREALRYAVRASASCVEDYGVTGEHLTAELKAIAAEAIRDRECDTD
Ga0247684_10120952	3300028138	Soil	VAQLVDPTGGGEVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVTGSHLIAELEAIRNETGEYQPG
Ga0307290_100923501	3300028791	Soil	VAELVDPTGGGEVLAGVFLALRADGLPERRALRYAVRAASSCVADYGVTGSHLIAELEAIRNETGEYQPG
Ga0302235_100261024	3300028877	Palsa	GEVLAGVFLALRADGCPAGEALRYAVRAATSCVADYGVSGPHLSAELAAICREVANAAAS
Ga0311340_104501141	3300029943	Palsa	ARLLVDGHPEDVNASETDVMDPTGGGEVLAGVFLALRADDCPAGEALRYAVRAATSCVADYGVSGPHLSAELAAIRREVANAAAIP
Ga0311339_109843991	3300029999	Palsa	GGGEILAGVFLALRADGRSECDALEYAVRAATSCVEDHGVTGPQLAAELEAIRRKVGDESASQRFAE
Ga0318515_102735272	3300031572	Soil	AVPRLVDPAGGGEVLAGVFLALRADGLPERVALKYAVRAAASSAADHGVTGSHLTAELEAIRQETGEYRPG
Ga0307508_108279561	3300031616	Ectomycorrhiza	ILAGVFLALRAEGLPEREALKHAVRASASCVADYGVTGSQLAAELAAIRAREYSAG
Ga0318574_105340261	3300031680	Soil	VFLALRAEGLPERMALKCAVRAAASCVADYGVTGSHLTAELEAIRCETAGSGEYSVGR
Ga0318496_101836251	3300031713	Soil	EVLAGVFLALRADGLPERVALKYAVRAAASSAADHGVTGSHLTAELEAIRQETGEYRPG
Ga0318496_105981242	3300031713	Soil	GVFLALRADGLPERLALRYAVRAAASSAADYGVTGAYLTAELKAIRRETASDGEYRAG
Ga0306917_109755622	3300031719	Soil	TQVVDPTSGGEVLAGVFLALRADGRSEREALRYAVRAATSCVADYGVTGSHLAAELHAIRREVRGAAAP
Ga0306918_103382821	3300031744	Soil	VDPIGSGEVLAGVFLALRAEGLPERTALKYAVGAAASCVADYGVTGSHLTAELEAIRLDTGTGGEYQAG
Ga0318502_104655272	3300031747	Soil	QEVEAVVPRLVDPAGGGEVLAGVFLALRADGLPERVALKYAVRAAASSAADHGVTGSHLTAELEAIRQETGEYRPG
Ga0318552_102369502	3300031782	Soil	AAVPRLVDPAGGGDVLAGVFLALRADGLPERVALKYAVRAAASSAADHGVTGSHLTAELEAIRQETGEYRPG
Ga0318503_102144941	3300031794	Soil	ALRADGLPERVALKYAVRAAASSAADHGVTGSHLTAELEAIRCETASTGEYSVSR
Ga0318523_100776201	3300031798	Soil	HPQEVEAAVPRLVDPAGGGEVLAGVFLALRADGLPERVALKYAVRAAASSAADHGVTGSHLTAELEAIRQETGEYRPG
Ga0318511_102544761	3300031845	Soil	LVDPIGSGEVLAGVFLALRAEGLPERTALKYAVGAAASCVADYGVTGSHLTAELEAIRLDTGTGGEYQAG
Ga0306919_103181261	3300031879	Soil	EVLAGVFLALRAEGLPERTALKYAVGAAASCVADYGVTGSHLTAELEAIRLDTGTGGEYQAG
Ga0318544_103924531	3300031880	Soil	ALRAEGLPERTALKYAVGAAASCVADYGVTGSHLTAELEAIRLDTGTGGEYQAG
Ga0306923_124983141	3300031910	Soil	GHPQEVEAAVPRLVDPAGGGEVLAGVFLALRADGLPERVALKYAVRAAASSAADHGVTGSHLTAELEAIRQETGEYRPG
Ga0308175_1017721752	3300031938	Soil	FLALRADGLPERRALRYAVRAASACVADHGVTGSHLIAELEAIRNETREYQPG
Ga0308174_111492671	3300031939	Soil	GEVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVTGPHLIAELEAIRNETGEYQPG
Ga0318556_101315602	3300032043	Soil	LRADGLPERVALKYAVRAAASSAADHGVTGSHLTAELEAIRLDTGTGGEYQAG
Ga0318558_105633462	3300032044	Soil	VPELVDPTGGGEVLAGVFLALRAEGLPERTALKYAVRAAASSAADHGVTGSHLTAELEAIRQETGEYRPG
Ga0318575_103496241	3300032055	Soil	VKREPSGARLIVDGHPQEVEAAVPHVVDPTGDGEVLAGVFLALRTEGLPERTALTYAVRAAASCVADYGVTGSHLTAELEAIRRETANSGEYSVSR
Ga0318505_102363091	3300032060	Soil	VPQLVDPIGSGEVLAGVFLALRAEGLPERTALKYAVGAAASCVADYGVTGSHLTAELEAIRLDTGTGGEYQAG
Ga0318513_102082911	3300032065	Soil	LVDPTGGGEVLAGVFLALRAEGLPERTALKYAVRAAASCAADYGVTGAHLNAELEAIRGEAGEYSPG
Ga0318514_101917321	3300032066	Soil	GVFLALRAEGLPERTALKYAVGAAASCVADYGVTGSHLTAELEAIRLDTGTGGEYQAG
Ga0306924_104014292	3300032076	Soil	GGDVLAGVFLALRADGLPERVALKYAVRAAASSAADHGVTGSHLTAELEAIRQETGEYRP
Ga0335085_106803222	3300032770	Soil	VFLALRAKGLPERTALKYAVRAAASCAADYGVTGAHLTAELKAIRRETREYAGG
Ga0335078_120158861	3300032805	Soil	RLIVDGHPQEVEAPVPQLLDTTGGGEVLAGVFLALRADGLPERLALKYAVRAAASSAADYGVTGARLTAELKAIRCEAGREGEYRAS
Ga0335078_124089031	3300032805	Soil	AVAHVVDPTGDGEVLAGVFLALLTEGLPERTALGYAVRAAAGCVADYGVTGSHLTAELEAIRRETASSGEYSVSR
Ga0335080_122304151	3300032828	Soil	VPQLVDPTGGGEVLAGVFLALRAEGLPERTALTYAVRAAASCAADYGVTGAHLTAELDAIRREAGEYTPA
Ga0335070_101360542	3300032829	Soil	GHPQEVEAAVPHLVDTTGGGEVLAGVFLALRADGLPERLALTYAVRAAASCAADYGVTGAYLTAELRAIRRETRGDGEYKAG
Ga0335071_101727341	3300032897	Soil	GARLLVDGHPQEVEAEPAQVVDPTGGGEVLAGVFLALRADGLPEREALHYAVRAATSCVADYGVAGPRLAAELEAIRREVTGTAAP
Ga0335071_113545371	3300032897	Soil	AVPQVVDTAGGGEVLAGVFLALRAEGLPERMALTYAVRAAASSAADYGVTGSHLAAELEAIRCETAGSGEYSVGR
Ga0335083_103466051	3300032954	Soil	VPQVVDTAGGGEVLAGVFLALRTEGLPERMALTYAVRAAASSAADYGVTGSHLAAELEAIRRETASSGEYSVGR
Ga0335083_105055692	3300032954	Soil	GHPQEVEAAVPQLVDPTGGGEVLAGVFLALRAEGLPERTALKYAVRAAASCAADYGVTGAHLTAELKAIRRETREYAGG
Ga0335076_106292671	3300032955	Soil	GVFLALRAEGLPERTALKHAVRAAASCAADYGVTGAYLTAELEVIRREAGEYSPG
Ga0310811_112047392	3300033475	Soil	GEVLAGVFLALRADGLPERRALRYAVRAASSCVADYGVTGSHLSAELEAIRNETREYQPG
Ga0373948_0102773_3_164	3300034817	Rhizosphere Soil	FLALRADGLPERLALRYAVRAASSCVADYGVTGSHLIAELEAIRNETGEYQPG
Ga0373958_0075451_565_753	3300034819	Rhizosphere Soil	DPTGGGEVLAGVFLALRADGLPERLALRYAVRAASSCVADYGVAGSHLIAELEAIRNETGEY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063969

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences