Metagenome / Metatranscriptome Family F063959

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F063959
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	77 residues
Representative Sequence	MERFLICNNPKCHFVLDRRINGKSQDGAQLILKKCPACGGDWSSICPSCTQTLAVKLVAGLPHSVCCDRKPHANARAA
Number of Associated Samples	81
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.82 %
% of genes near scaffold ends (potentially truncated)	24.03 %
% of genes from short scaffolds (< 2000 bps)	60.47 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (57.364 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.008 % of family members)
Environment Ontology (ENVO)	Unclassified (49.612 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (83.721 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.32% β-sheet: 19.81% Coil/Unstructured: 68.87%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF01120	Alpha_L_fucos	8.53
PF16499	Melibiase_2	5.43
PF05951	Peptidase_M15_2	3.88
PF13690	CheX	3.10
PF02744	GalP_UDP_tr_C	2.33
PF07238	PilZ	2.33
PF07969	Amidohydro_3	2.33
PF05336	rhaM	2.33
PF02065	Melibiase	1.55
PF08448	PAS_4	1.55
PF02449	Glyco_hydro_42	1.55
PF13620	CarboxypepD_reg	1.55
PF01436	NHL	1.55
PF13561	adh_short_C2	1.55
PF00106	adh_short	1.55
PF06026	Rib_5-P_isom_A	0.78
PF02154	FliM	0.78
PF03466	LysR_substrate	0.78
PF04962	KduI	0.78
PF07690	MFS_1	0.78
PF13384	HTH_23	0.78
PF00296	Bac_luciferase	0.78
PF11453	DUF2950	0.78
PF08327	AHSA1	0.78
PF02826	2-Hacid_dh_C	0.78
PF05050	Methyltransf_21	0.78
PF10509	GalKase_gal_bdg	0.78
PF09346	SMI1_KNR4	0.78
PF16757	Fucosidase_C	0.78
PF01052	FliMN_C	0.78
PF14437	MafB19-deam	0.78
PF01790	LGT	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG3669	Alpha-L-fucosidase	Carbohydrate transport and metabolism [G]	8.53
COG3108	Uncharacterized conserved protein YcbK, DUF882 family	Function unknown [S]	3.88
COG3254	L-rhamnose mutarotase	Cell wall/membrane/envelope biogenesis [M]	2.33
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	1.55
COG3345	Alpha-galactosidase	Carbohydrate transport and metabolism [G]	1.55
COG0120	Ribose 5-phosphate isomerase	Carbohydrate transport and metabolism [G]	0.78
COG0682	Prolipoprotein diacylglyceryltransferase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1868	Flagellar motor switch protein FliM	Cell motility [N]	0.78
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.78
COG3717	5-keto 4-deoxyuronate isomerase	Carbohydrate transport and metabolism [G]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.36 %
Unclassified	root	N/A	42.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.36 %
Unclassified	root	N/A	42.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.36 %
Unclassified	root	N/A	42.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.64 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	25.58 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.88 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.64 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11.63 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.10 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.55 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.64 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	10.08 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	3.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.10 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.55 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.64 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10.08 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.10 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.55 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.78 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.78 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.64 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.10 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.55 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	0.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	0.78 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.78 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.64 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.10 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.55 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.78 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.78 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.64 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.10 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.55 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.78 %
Streptomyces clavuligerus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces clavuligerus	0.78 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.78 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10009018	All Organisms → cellular organisms → Bacteria	8469	Open in IMG/M
3300003505\|JGIcombinedJ51221_10129961	Not Available	1012	Open in IMG/M
3300004080\|Ga0062385_10012664	Not Available	2935	Open in IMG/M
3300004080\|Ga0062385_10124490	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1291	Open in IMG/M
3300004080\|Ga0062385_10193002	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300004080\|Ga0062385_11279658	Not Available	504	Open in IMG/M
3300004082\|Ga0062384_100391759	Not Available	892	Open in IMG/M
3300004091\|Ga0062387_100643499	Not Available	767	Open in IMG/M
3300004092\|Ga0062389_100244905	Not Available	1812	Open in IMG/M
3300004092\|Ga0062389_100906650	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300004092\|Ga0062389_103304147	Not Available	604	Open in IMG/M
3300004119\|Ga0058887_1282160	Not Available	647	Open in IMG/M
3300004121\|Ga0058882_1727830	Not Available	508	Open in IMG/M
3300004152\|Ga0062386_100016036	All Organisms → cellular organisms → Bacteria	5404	Open in IMG/M
3300005406\|Ga0070703_10001507	All Organisms → cellular organisms → Bacteria	6964	Open in IMG/M
3300005526\|Ga0073909_10542826	Not Available	567	Open in IMG/M
3300005534\|Ga0070735_10009811	All Organisms → cellular organisms → Bacteria	7410	Open in IMG/M
3300005536\|Ga0070697_100073026	All Organisms → cellular organisms → Bacteria	2816	Open in IMG/M
3300005537\|Ga0070730_10432174	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	849	Open in IMG/M
3300005537\|Ga0070730_10511455	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	770	Open in IMG/M
3300005541\|Ga0070733_10567502	Not Available	760	Open in IMG/M
3300005545\|Ga0070695_100408500	Not Available	1031	Open in IMG/M
3300005591\|Ga0070761_10011353	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5021	Open in IMG/M
3300005591\|Ga0070761_10130727	Not Available	1462	Open in IMG/M
3300005591\|Ga0070761_10461337	Not Available	780	Open in IMG/M
3300005591\|Ga0070761_10513613	Not Available	740	Open in IMG/M
3300005591\|Ga0070761_11003810	Not Available	530	Open in IMG/M
3300005602\|Ga0070762_10002763	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	8329	Open in IMG/M
3300005602\|Ga0070762_10005188	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	6297	Open in IMG/M
3300005602\|Ga0070762_10031132	All Organisms → cellular organisms → Bacteria	2854	Open in IMG/M
3300005712\|Ga0070764_11049474	Not Available	515	Open in IMG/M
3300006174\|Ga0075014_100306168	Not Available	839	Open in IMG/M
3300006176\|Ga0070765_100000753	All Organisms → cellular organisms → Bacteria	19354	Open in IMG/M
3300006176\|Ga0070765_100035920	All Organisms → cellular organisms → Bacteria	3914	Open in IMG/M
3300006176\|Ga0070765_100074145	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	2866	Open in IMG/M
3300006176\|Ga0070765_101496588	Not Available	635	Open in IMG/M
3300006893\|Ga0073928_10040167	All Organisms → cellular organisms → Bacteria	4343	Open in IMG/M
3300007982\|Ga0102924_1002727	All Organisms → cellular organisms → Bacteria	18999	Open in IMG/M
3300009520\|Ga0116214_1274213	Not Available	643	Open in IMG/M
3300010343\|Ga0074044_10000664	All Organisms → cellular organisms → Bacteria	32210	Open in IMG/M
3300010865\|Ga0126346_1297399	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1382	Open in IMG/M
3300011120\|Ga0150983_11110224	Not Available	875	Open in IMG/M
3300011120\|Ga0150983_12738510	All Organisms → cellular organisms → Bacteria → Acidobacteria	1389	Open in IMG/M
3300011120\|Ga0150983_12973686	Not Available	693	Open in IMG/M
3300011120\|Ga0150983_14132274	Not Available	510	Open in IMG/M
3300011120\|Ga0150983_14720864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300017924\|Ga0187820_1001722	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4975	Open in IMG/M
3300017930\|Ga0187825_10267734	Not Available	630	Open in IMG/M
3300020579\|Ga0210407_10032294	All Organisms → cellular organisms → Bacteria → Acidobacteria	3896	Open in IMG/M
3300020579\|Ga0210407_10033037	All Organisms → cellular organisms → Bacteria → Acidobacteria	3850	Open in IMG/M
3300020579\|Ga0210407_10560750	Not Available	891	Open in IMG/M
3300020579\|Ga0210407_10589148	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	867	Open in IMG/M
3300020580\|Ga0210403_10000969	All Organisms → cellular organisms → Bacteria → Acidobacteria	28153	Open in IMG/M
3300020580\|Ga0210403_10038635	All Organisms → cellular organisms → Bacteria	3816	Open in IMG/M
3300020580\|Ga0210403_10242088	All Organisms → cellular organisms → Bacteria → Acidobacteria	1480	Open in IMG/M
3300020580\|Ga0210403_10463805	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300020580\|Ga0210403_10613053	All Organisms → cellular organisms → Bacteria → Acidobacteria	878	Open in IMG/M
3300020580\|Ga0210403_10663155	Not Available	838	Open in IMG/M
3300020581\|Ga0210399_10097475	Not Available	2402	Open in IMG/M
3300020582\|Ga0210395_10000069	All Organisms → cellular organisms → Bacteria	86998	Open in IMG/M
3300020582\|Ga0210395_10012021	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6423	Open in IMG/M
3300020582\|Ga0210395_10915891	Not Available	651	Open in IMG/M
3300020583\|Ga0210401_10073593	All Organisms → cellular organisms → Bacteria	3218	Open in IMG/M
3300021170\|Ga0210400_11418342	Not Available	553	Open in IMG/M
3300021171\|Ga0210405_10000519	All Organisms → cellular organisms → Bacteria	50930	Open in IMG/M
3300021171\|Ga0210405_10054630	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3158	Open in IMG/M
3300021180\|Ga0210396_10016491	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6861	Open in IMG/M
3300021180\|Ga0210396_10287091	All Organisms → cellular organisms → Bacteria → Acidobacteria	1458	Open in IMG/M
3300021180\|Ga0210396_11666607	Not Available	519	Open in IMG/M
3300021181\|Ga0210388_10003181	All Organisms → cellular organisms → Bacteria → Acidobacteria	12832	Open in IMG/M
3300021181\|Ga0210388_10295026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1424	Open in IMG/M
3300021402\|Ga0210385_10944939	Not Available	662	Open in IMG/M
3300021405\|Ga0210387_10001910	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15798	Open in IMG/M
3300021407\|Ga0210383_10000024	All Organisms → cellular organisms → Bacteria	190173	Open in IMG/M
3300021407\|Ga0210383_10438347	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300021420\|Ga0210394_10416217	All Organisms → cellular organisms → Bacteria → Acidobacteria	1183	Open in IMG/M
3300021420\|Ga0210394_10669627	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300021433\|Ga0210391_10040016	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3747	Open in IMG/M
3300021433\|Ga0210391_10042376	All Organisms → cellular organisms → Bacteria	3636	Open in IMG/M
3300021433\|Ga0210391_10587317	Not Available	875	Open in IMG/M
3300021474\|Ga0210390_10338476	Not Available	1274	Open in IMG/M
3300021477\|Ga0210398_10077749	All Organisms → cellular organisms → Bacteria → Acidobacteria	2696	Open in IMG/M
3300022523\|Ga0242663_1066051	Not Available	667	Open in IMG/M
3300022525\|Ga0242656_1142159	Not Available	501	Open in IMG/M
3300022557\|Ga0212123_10001249	All Organisms → cellular organisms → Bacteria	72535	Open in IMG/M
3300022557\|Ga0212123_10006680	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	19012	Open in IMG/M
3300022715\|Ga0242678_1086357	Not Available	506	Open in IMG/M
3300024178\|Ga0247694_1000251	All Organisms → cellular organisms → Bacteria	14120	Open in IMG/M
3300024225\|Ga0224572_1031627	Not Available	1009	Open in IMG/M
3300024246\|Ga0247680_1017149	Not Available	1051	Open in IMG/M
3300024323\|Ga0247666_1096193	Not Available	588	Open in IMG/M
3300025917\|Ga0207660_10862313	Not Available	739	Open in IMG/M
3300026557\|Ga0179587_10349697	Not Available	958	Open in IMG/M
3300027174\|Ga0207948_1006286	Not Available	1356	Open in IMG/M
3300027565\|Ga0209219_1054750	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	995	Open in IMG/M
3300027567\|Ga0209115_1058205	Not Available	881	Open in IMG/M
3300027701\|Ga0209447_10043153	All Organisms → cellular organisms → Bacteria → Acidobacteria	1247	Open in IMG/M
3300027725\|Ga0209178_1343481	Not Available	557	Open in IMG/M
3300027729\|Ga0209248_10176102	Not Available	634	Open in IMG/M
3300027737\|Ga0209038_10265611	Not Available	513	Open in IMG/M
3300027795\|Ga0209139_10012746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3102	Open in IMG/M
3300027812\|Ga0209656_10042363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces clavuligerus	2625	Open in IMG/M
3300027853\|Ga0209274_10026198	All Organisms → cellular organisms → Bacteria	2680	Open in IMG/M
3300027853\|Ga0209274_10344596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300027853\|Ga0209274_10707205	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300027855\|Ga0209693_10085742	Not Available	1556	Open in IMG/M
3300027857\|Ga0209166_10008208	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6930	Open in IMG/M
3300027986\|Ga0209168_10010620	All Organisms → cellular organisms → Bacteria	5524	Open in IMG/M
3300028016\|Ga0265354_1000032	All Organisms → cellular organisms → Bacteria	21446	Open in IMG/M
3300028016\|Ga0265354_1001672	All Organisms → cellular organisms → Bacteria	3075	Open in IMG/M
3300028906\|Ga0308309_10001263	All Organisms → cellular organisms → Bacteria → Acidobacteria	15050	Open in IMG/M
3300028906\|Ga0308309_10007778	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6575	Open in IMG/M
3300028906\|Ga0308309_10170432	Not Available	1769	Open in IMG/M
3300028906\|Ga0308309_10230369	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1541	Open in IMG/M
3300028906\|Ga0308309_10553829	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300030730\|Ga0307482_1229817	Not Available	575	Open in IMG/M
3300030759\|Ga0265745_1006351	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300031018\|Ga0265773_1026181	Not Available	603	Open in IMG/M
3300031708\|Ga0310686_100969343	Not Available	4346	Open in IMG/M
3300031708\|Ga0310686_108484973	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1932	Open in IMG/M
3300031708\|Ga0310686_111845872	Not Available	541	Open in IMG/M
3300031708\|Ga0310686_114759121	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	8411	Open in IMG/M
3300031715\|Ga0307476_10911577	Not Available	648	Open in IMG/M
3300031718\|Ga0307474_10362729	Not Available	1123	Open in IMG/M
3300031823\|Ga0307478_11231723	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300031962\|Ga0307479_10547669	Not Available	1140	Open in IMG/M
3300032160\|Ga0311301_10353904	All Organisms → cellular organisms → Bacteria → Acidobacteria	2294	Open in IMG/M
3300032180\|Ga0307471_100005723	All Organisms → cellular organisms → Bacteria	7804	Open in IMG/M
3300032895\|Ga0335074_10022429	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8898	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.67%
Host-Associated	Host-Associated	2.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.62%
Aquatic	Environmental → Aquatic	17.05%
Plants	Host-Associated → Plants	2.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.62%
Freshwater	Environmental → Aquatic → Freshwater	13.18%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.33%
Sediment	Environmental → Aquatic → Sediment	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.61%
Loam	Environmental → Terrestrial → Soil → Loam	29.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.18%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.10%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	26.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.18%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.63%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.10%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.01%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	17.05%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	11.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.30%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.65%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.55%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004119	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF210 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028016	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030759	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031018	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_100090188	3300001593	Forest Soil	MERFLVCNNPKCHFVLDRRINGKSVDGAHFILKKCPACGGDWSSTCPSCTQALAVKLVGGLPHSVCCNHKLAAAARAA*
JGIcombinedJ51221_101299612	3300003505	Forest Soil	MEHFLICNNSECHFVLDRRINGRSLDGAQLILKKCPACGGDWSSTCPSCAQALVVKLVAGLPQTGCCDRKLAASVRAA*
Ga0062385_100126644	3300004080	Bog Forest Soil	MERFLICNNPRCRFVLDRRVNGKSADGAQLILKKCPACGGAWSSTCPSCSQALSVKLVGELPHSVCCERKPAASARAA*
Ga0062385_101244903	3300004080	Bog Forest Soil	MERFLVCKNPKCHFVLDRRINGKSPDGAHLILKKCPACGGEWSSTCPSCAQPLDMKLVRGLPHAVCCERKLDANVRAA*
Ga0062385_101930021	3300004080	Bog Forest Soil	MERFLVCNNPKCHFVLDRRINGKSQDGAQLIRKKCPACGGDWSSICPSCTQTLAVKLVAGLPHSVCCDRKPHANARAA*
Ga0062385_112796582	3300004080	Bog Forest Soil	MERFLVCNNPKCHFVLDRHIDGKSSYGAQLILKKCPDCGSDWSATCPACMQSLAVKLVGGLPHSICCERRHATSARAA*
Ga0062384_1003917592	3300004082	Bog Forest Soil	MPRFLICNNPKCHFVLDRRINGKSPDGAQLILKKCPTCGGDWSSICPSCTQTLAVKLVAGLPHSVCCDRKPHANARAA*
Ga0062387_1006434991	3300004091	Bog Forest Soil	MERFLVCNNPKCHFVLDRYINGKDCAHLILKKCPDCGGDWSATCPACMHALAVKLVGGMPHSVCCERGHATNARAA*
Ga0062389_1002449053	3300004092	Bog Forest Soil	MERYFICNNPECRFVLDRLINGKSVDGAHLILKKCPACGGAWSSTCPSCTHALAVKLMAGLPHSVCCDRKPAASARAA*
Ga0062389_1009066502	3300004092	Bog Forest Soil	MPRFLICNNPKCHFVLDRRINGRSQDGAQLILKKCPACGGDWSSICPLCTQTVAVKLVAGLPHSVCCDRKPHASARAA*
Ga0062389_1033041471	3300004092	Bog Forest Soil	MERFLVCNNPGCRFVLDRRVNGRSQDGAQLILKKCPACGGDWSSACPSCTQALAVKLVAGLPHSI
Ga0058887_12821601	3300004119	Forest Soil	DPPMERFLVCNNSKCHFVLDRRINGKSEDGAHLILKKCPACGGTWSTTCPSCMQALAMRLVGGLPHSVCCERKPDAKAQAA*
Ga0058882_17278301	3300004121	Forest Soil	EADPMEHFLICNNSECHFVLDRRINGRSLDGAQLILKKCPACGGDWSSTCPSCAQALVVKLVAGLPQSGCCDRKLAASVRAA*
Ga0062386_1000160364	3300004152	Bog Forest Soil	MERFLICNNPKCHFVLDRRVNGISLDGAQLILKKCPACDGDWSSTCPSCTRALAVKLVAGLPLSICCDRKPHADARAA*
Ga0070703_100015073	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MERFMVCDNPGCRFILDRRINGKSLDGAQLVLKKCPACGGDWSAACPSCNQPLATKLVAGLPHSVCCDRSPRAKSRAA*
Ga0073909_105428263	3300005526	Surface Soil	MERFMICDNPGCRFILDRRINGKSLDGAQLVLKKCPACGGDWSAACPSCNQPLATKLVAGLPHSVCCDRSPSAKSRA
Ga0070735_100098112	3300005534	Surface Soil	MERFLICSNAKCRFVLDRRINGKSLDGAHLILKKCPDCGGDWSSTCPSCAQPLAMKLVAGLPQSACCDRKPKAAAQAA*
Ga0070697_1000730264	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MERFLVCNTPKCHFVLDRRINGKSMDGAQLILKKCPCCGGDWSAHCPSCGQPLVTKMVDGLPHALCCERRPSVGARAA*
Ga0070730_104321742	3300005537	Surface Soil	MERFLVCNNPKCHFVLDRRINGKSMDGAQVILKKCPSCGGDWSATCPSCSQPLVIKMVGGLPHNLCCERRASMKARAA*
Ga0070730_105114552	3300005537	Surface Soil	MERFLVCNNPKCHFVLDRRINGKSMDGAQVILKKCPSCGGDWSATCPSCSQPLVIKMVGGLPRSLCC
Ga0070733_105675021	3300005541	Surface Soil	MERFLVCNNPKCRFVLDRRIDGKSLDGAQLILKKCPACGGDWSSTCPACSQELAIKLVGGLPHSVCCERKPTSNARAA*
Ga0070695_1004085002	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MERFLVCNNPKCHFVLDRRINGKSMDGAQVILKKCPSCGGDWSATCPSCSQPLVIKMVGGLPHNLCCERRASMK
Ga0070761_100113533	3300005591	Soil	MERFLICNNPKCHFVLDRRINGKSLDGAQLILKKCPACGGDWSSICPSCTQALSMKLVAGLPHSVCCDRKSAANTRAA*
Ga0070761_101307272	3300005591	Soil	MERFLVCKNPKCHFVLDRRINGKSPDGAHLILKKCPACGGEWSSTCPSCAQPLDMKLVRGLPHAVCCDRKLDANVRAA*
Ga0070761_104613372	3300005591	Soil	MERFLICKNPKCRFVLDRHINGKSLDGAHLILTKCPACGGAWSTTCPSCAQALAVKMVNGLPHSVCCDRKPASARAA*
Ga0070761_105136131	3300005591	Soil	MERFLICNNSKCHFVLDRRINGRSLDGAQLILKKCPACGGNWSSTCPSCAQALVVKLVAGLPQSGCCDRKLAASARAA*
Ga0070761_110038101	3300005591	Soil	LSAQAYFYLAPSLKEAAPMERFLICNNSKCHFVLDRRINGRSLDGAQLILKKCPACGGDWSSTCPSCAQALVVKLVAGLPQSVCCDRKLAASARAA*
Ga0070762_100027633	3300005602	Soil	MERFLICSNPKCHFVLDRRINGGSSDGAQLILKKCPACGGGWSSTCPSCAHALAVKLVAGLPQSVCCDRKLAARARAA*
Ga0070762_100051887	3300005602	Soil	MDHFLVCNNPKCHFVLDRRINGKSLDGAQLILKKCPACGGAWSTNCPCCAQTLAVKMVGGLPRFVCCDRKPAANARAA*
Ga0070762_100311323	3300005602	Soil	MERFLICNNPKCRFVLDRRINGKSLDGAQLILRRCPACGGAWSSTCPSCAQNLAVKLVDGLPHSVCCDRKPSASARAA*
Ga0070764_110494741	3300005712	Soil	ICNNPKCHFVLDRRINGKSSDGAQLIQKKCPACGGDWSSICPSCTQTLAVKLVAGLPHSVCCDRKPHANARAA*
Ga0075014_1003061682	3300006174	Watersheds	MERFLICKNPKCHFVLDRRINGQSVDGAHHILKKCPACGGVWSSNCPSCSQPLAMRLVGGILHSVCCTGKTHTRARAA*
Ga0070765_10000075316	3300006176	Soil	MERFLICNNPKCHFVLDRRINGKSLDGAQLVLQKCPECGGDWSTTCPSCMQPLSMKLVGDLPHPVCCVSQSDAKTRAA*
Ga0070765_1000359204	3300006176	Soil	MPRFLICNNPKCHFVLDRRINGKSSDGAQLIQKKCPACGGDWSSICPSCTQTLAVKLVAGLPHSVCCDRKPHANARAA*
Ga0070765_1000741452	3300006176	Soil	MERFLVCNNPSCHFVLDRRVNGKSQDGAQLILKKCPACGGNWSATCPSCAHSLAVKLVAGLPHAVCCDRKPHADARAA*
Ga0070765_1014965881	3300006176	Soil	MERFLVCNNSKCHFVLDRRINGKSEDGAHLILKKCPACGGTWSTTCPSCMQALAMRLVGGLPHSVCCERKPDAKAQAA*
Ga0073928_100401676	3300006893	Iron-Sulfur Acid Spring	MERFLVCNNPKCRFILDRRINGKSADGAQLILKKCPACGGAWSSTCPSCSQALAVKVVGGLPHSACCDQKPHANARAA*
Ga0102924_10027271	3300007982	Iron-Sulfur Acid Spring	MEPYFICENPKCRFVLDRRINGQSLDGAHLILKECPACGGDWSSICPACGSALTVKLVAGLPRTVCCERKPQAKARAA*
Ga0116214_12742131	3300009520	Peatlands Soil	MERFLVCKNPKCHFVLDRRINGQSVDGAHHILRKCPACGGAWSSNCPSCSQPLAMRLVGGIPHAVCCTGKTHTRARAA*
Ga0074044_1000066428	3300010343	Bog Forest Soil	MERFLICNNPKCHFVLDRRINGKSLDGAQLILKKCPACGSDWSSTCPSCNQALAVKLVAGLPYSVCCDHKPHANARAA*
Ga0126346_12973993	3300010865	Boreal Forest Soil	MERFLVCKNPNCHFVLDRRINGQSVDGAHHILKKCPACGGAWSSNCPSCSQPLDMRLVGGIPHAVCCTGGTQTRARAA*
Ga0150983_111102241	3300011120	Forest Soil	MERFLVCNNPSCHFVLDRRINGKSLDGAQLVLQKCPECGGDWSTTCPSCSQPVAMELVGGLPHPVCCARQSDQKTRAA*
Ga0150983_127385101	3300011120	Forest Soil	GDPPMERFLVCNNSKCHFVLDRRINGKSEDGAHLILKKCPACGGTWSTTCPSCMQALAMRLVGGLPHSVCCERKPDAKAQAA*
Ga0150983_129736861	3300011120	Forest Soil	MEHFLICNNSECHFVLDRRINGRSLDGAQLILKKCPACGGDWSSTCPSCAQALVVKLVAGLPQSGCCDRKLAASVRAA*
Ga0150983_141322741	3300011120	Forest Soil	EHFLVCNNSKCHFVLDRRINGKSLDGAHLILRKCPTCGGAWSSTCPSCTQALAVKLVGGLPHAVCCDRKLDAKARAA*
Ga0150983_147208642	3300011120	Forest Soil	RTSPMDHFLVCNNPKCHFVLDRRINGKSLDGAQLILKKCPACGGAWSTNCPCCAQTLAVKMVGGLPRFVCCDRKPAANARAA*
Ga0187820_10017223	3300017924	Freshwater Sediment	MKHYLICENPKCRFVLDRRINGKSLDGAHLVLRKCPGCGGAWSSTCPACRQTLAIRMVGGLPHLVCCDRKPLAKARAA
Ga0187825_102677342	3300017930	Freshwater Sediment	MERFLVCKNPKCHFVLDRRINGQSVDGAHHILRKCPACGGAWSSSCPSCSQPLAMRLVGGIPHAVCCTGKTHTRARAA
Ga0210407_100322945	3300020579	Soil	MERFLVCKNPKCHFVLDRRINGQSVDSAHLILKKCPACGGAWSSNCPSCSQPLAMRLVGGIPQSVCCTGKTHTRARAA
Ga0210407_100330375	3300020579	Soil	MERFLICNNPGCRFVLDRRVNGKSPDGAQLILKKCPACGGDWSSTCPSCAHSLAVKLVGGLPHSVCCSHKPAANARAA
Ga0210407_105607502	3300020579	Soil	MERFLVCNNPSCHFVLDRRINGKSLDGAQLVLQKCPECGGDWSTTCPSCSQPVAMELVGGLPHPVCCARQSDQKTRAA
Ga0210407_105891482	3300020579	Soil	MERFLICNNSKCHFVLDRRINGKSLDGAHRMLKKCPDCGGDWSSTCPSCARPLAMKLVEGLPQSKCCDRKTDLRAAQYPPRIAQNT
Ga0210403_100009699	3300020580	Soil	MERFLVCKNPKCHFVLDRRINGQAVDGAHLILKKCPACGGAWSSNCPSCSQPLAMRLVGGIPQSVCCTGKTHTRARAA
Ga0210403_100386354	3300020580	Soil	MERFLVCNNPSCHFVLDRRVNGKSLDGAQLILKKCPACGGDWSTTCPSCAQTLAVKLVAGLPHSVCCDRKQAASARAA
Ga0210403_102420882	3300020580	Soil	MERFLVCNNPSCHFVLDRRINGKSPDGAQLVLQKCPECGGDWSTICPSCLQPVAMKLVGGLPHPVCCVRQSAQKTRAA
Ga0210403_104638051	3300020580	Soil	MERFMVCDNPGCRFILDRRINGKSLDGAQLILKKCPACGGNWSSACPSCNQPLTTKLVAGLPHSVCCDRTPSAKFRAA
Ga0210403_106130533	3300020580	Soil	MERFLVCKNPKCHFVLDRRINGQSVDSAHLILKKCPACGGAWSSNCPSCSQPLAMRLVGGIPQ
Ga0210403_106631552	3300020580	Soil	RFLVCNNPSCHFVLDRRINGKSLDGAQLVLQKCPECGGDWSTTCPSCLQPVAMKLVGELPHLVCCARQSDQKTRAA
Ga0210399_100974754	3300020581	Soil	MERFLICKNPKCHFVLDRRINGQSVDGAHHILKKCPACGGVWSSNCPSCSQPLAMRLVGGILHFVCCTGKTHTRARAA
Ga0210395_1000006960	3300020582	Soil	MEHFLICNNSECHFVLDRRINGRSLDGAQLILKKCPACGGDWSSTCPSCAQALVVKLVAGLPQSGCCDRKLASSVRAA
Ga0210395_100120215	3300020582	Soil	MERFLVCNNPSCHFVLDRRINGKSLDGAQLVLQKCPECGGDWSTTCPSCLQPVAMKLVGELPHLVCCARQSDQKTRAA
Ga0210395_109158912	3300020582	Soil	MERFLICNNPRCRFVLDRRVNGKSLDGAQLILKKCPACGGDWSSTCPSCAQSLAVKLVGGLPHSVCCGHKPAANARAA
Ga0210401_100735932	3300020583	Soil	MERFLICNNSKCHFVLDRRINGESRDGAQLILEKCPACGGDWSTTCPSCAQALAIKLVDGLPHSVCCDHKPSASARAA
Ga0210400_114183422	3300021170	Soil	MPRFLICNNPKCHFVLDRRINGKSLDGAQLILKKCPECGGDWSSICPSCTQALAVKLVAGLPHSVCCDRKPHTNAR
Ga0210405_1000051937	3300021171	Soil	MERFLVCNNPSCHSVLDRRINGKSLDGAHLIEKKFPACGGAWSSTCPSCSQALAVKLVDGLPHSVGCNHKPRADARARQVSAAQSLNQVQA
Ga0210405_100546301	3300021171	Soil	MERFLVCNNPSCRFVLDRRINGKSLDGAQLVLQKCPECGGDWSTTCPSCSQPLTMKLVGGLPHLVCCVHQ
Ga0210396_100164916	3300021180	Soil	MEHFLICNNSECHFVLDRRINGRSLDGAQLILKKCPACGGDWSSTCPSCAQALVVKLVAGLPQTGCCDRKLAASVRAA
Ga0210396_102870912	3300021180	Soil	MDHFLVCNNPKCHFVLDRRINGKSLDGAQLILKKCPACGGAWSTNCPCCAQTLAVKMVGGLPRFVCCDRKPAANARAA
Ga0210396_116666072	3300021180	Soil	MERFVICNDPKCHFVLDRRINGKSLVSAHLILKKCPDCGADWSSTCPACARPLAMKLVAGLPQSACCDRKAKARAA
Ga0210388_100031815	3300021181	Soil	MPRFLICNNPKCHFVLDRRINGKSSDGAQLIQKKCPACGGDWSSICPSCTQTLAVKLVAGLPHSVCCDRKPHANARAA
Ga0210388_102950262	3300021181	Soil	MEHFLICNNSECHFVLDRRINGRSLDGAQLILKKCPACGGDWSSTCPSCAQALVVKLVAGLPQSGCCDRKLAASVRAA
Ga0210385_109449391	3300021402	Soil	MERFLICKNSKCRFVLDRRINGKSLDGAHLLLMECPACGGAWSTTCPSCAQALAVKMVDGLPHSVCCDRKPASARAA
Ga0210387_100019105	3300021405	Soil	MERFLICSNPKCHFVLDRRINGGSSDGAQLILKKCPACGGGWSSTCPSCAHALAVKLVAGLPQSVCCDRKLAARARAA
Ga0210383_10000024118	3300021407	Soil	MERFLICNNPKCHFVLDRRINGRSLDGAQLILKKCPSCGGDWSSTCPSCAQALVVKLVAGLPESVCCDRKLAASARAA
Ga0210383_104383471	3300021407	Soil	ICNNPKCHFVLDRRINGKSQDGAQLILKKCPACGGDWSSICPSCTQTLAVKLVAGLPHSVCCDRKPHANARAA
Ga0210394_104162171	3300021420	Soil	MERFLVCKNPKCHFVLDRRINGQSVDSAHLILKKCPACGGAWSSNCPSCSQPLAMRLVGGIPQSVCCTGKTHTR
Ga0210394_106696271	3300021420	Soil	MENVLVCKNPRCHFVLDRRINGASLDGVQKIVKKCPGCGSGWSSSCPYCDQPLA
Ga0210391_100400166	3300021433	Soil	MERFLICNNPRCRFVLDRRVNGKSLDGAQLILKKCPACGGDWSSTCPSCAQSLAVKLVGGLPHSVCCG
Ga0210391_100423764	3300021433	Soil	MERFLVCNNPKCHFVLDRRINGKSLDGAQLIQKKCPSCGGDWSSICPSCAQTLAVKLVAGLPHSVCCDRKPHANARAA
Ga0210391_105873171	3300021433	Soil	MEHFLICNNSECHFVLDRRINGRSLDGAQLILKKCPACGGDWSSTCPSCAQALGVKLVAGLPQSGCCDRKLASSVRAA
Ga0210390_103384761	3300021474	Soil	MERFLVCNNPSCHFVLDRRINGKSLDGAQLVLQKCPECGGDWSTTCPSCLQPVAMKLVGELPHLVCCARQPDQKTRAA
Ga0210398_100777493	3300021477	Soil	MERFLICNNPKCHFVLDRRINGKSQDGAQLILKKCPACGGDWSSICPSCTQTLAVKLVAGLPHSVCCDRKPHANARAA
Ga0242663_10660512	3300022523	Soil	SPMERFLVCNNPSCHFVLDRRINGKSLDGAQLVLQKCPECGGDWSTTCPSCLQPVAMKLVGELPHLVCCARQSDQKTRAA
Ga0242656_11421591	3300022525	Soil	PMERFLVCNNPSCHFVLDRRINGKSLDGAQLVLQKCPECGGDWSTTCPSCLQPVAMKLVGELPHLVCCARQSDQKTRAA
Ga0212123_1000124943	3300022557	Iron-Sulfur Acid Spring	MERFLVCNNPKCRFILDRRINGKSADGAQLILKKCPACGGAWSSTCPSCSQALAVKVVGGLPHSACCDQKPHANARAA
Ga0212123_100066802	3300022557	Iron-Sulfur Acid Spring	MEPYFICENPKCRFVLDRRINGQSLDGAHLILKECPACGGDWSSICPACGSALTVKLVAGLPRTVCCERKPQAKARAA
Ga0242678_10863571	3300022715	Soil	DPMEHFLICNNSECHFVLDRRINGRSLDGAQLILKKCPACGGDWSSTCPSCAQALVVKLVAGLPQSGCCDRKLASSVRAA
Ga0247694_100025111	3300024178	Soil	MELFLVCNNPKCHFILDRRINGKSMDGAQVILKKCPSCGGDWSATCPSNGQPLATKMVGGLPHSLCCERRPSMKARAA
Ga0224572_10316272	3300024225	Rhizosphere	MERFLICNNPRCRFVLDRRVNGKSLDGAQLILKKCPACGGDWSSTCPSCAQSLAVKLVGGLPHSVCCGHKPAANARTA
Ga0247680_10171492	3300024246	Soil	MERFLVCNNPKCHFVLDRRINGKSKDGAQVILKKCPSCGGDWSATCPSCSQPLVTKMVGGLPHTVCCERRPSVKARAA
Ga0247666_10961931	3300024323	Soil	MERFLVCNNPKCHFVLDRRINGKSMDGAQVILKKCPSCGGDWSATCPSCSQPLVIKMVGGLPHNLCCERRASMKARAA
Ga0207660_108623131	3300025917	Corn Rhizosphere	MERFMVCDNPGCRFILDRRINGKSLDGAQLVLKKCPACGGDWSAACPSCNQPLATKLVAGLPHSVCCDRSP
Ga0179587_103496971	3300026557	Vadose Zone Soil	MERFLVCKNPKCHFVLDRRINGQSVDGAHHILRKCPACGGAWSSNCPSCGQPLDMRLVGGIPQSVCCTGKTHTRARAA
Ga0207948_10062863	3300027174	Forest Soil	MERFLICNNPGCRFVLDRRVNGKSPDGAQLILKKCPACGGDWSSTCPSCAHSLAVKLVGGLPHPVCCNHKPAANARAA
Ga0209219_10547502	3300027565	Forest Soil	MERFLVCNNPKCHFVLDRRINGKSVDGAHLILKKCPACGGDWSSTCPSCTQALAVKLVGGLPHSVCCNHKLAAAARAA
Ga0209115_10582052	3300027567	Forest Soil	MERFLICSNPKCHFVLDRRINGGSSDGAQLILKKCPACGGGWSSTCPSCAHALAVKLVAGLPQSVCCDRK
Ga0209447_100431532	3300027701	Bog Forest Soil	MERFLICNNPRCRFVLDRRVNGKSADGAQLILKKCPACGGAWSSTCPSCSQALSVKLVGELPHSVCCERKPAASARAA
Ga0209178_13434812	3300027725	Agricultural Soil	MEHYSVCNNSKCRFLLDRRINGESVDGAQLLLKKCPSCGGHWSSTCPTCGSALSVRLVEGLPHIACCERKPLAKARAA
Ga0209248_101761021	3300027729	Bog Forest Soil	MERFLVCNNPKCHFVLDRRINGKSQDGAQLIRKKCPACGGDWSSICPSCTQTLAVKLVAGLPHSVCCDRKPHANARAA
Ga0209038_102656111	3300027737	Bog Forest Soil	MERFLVCKNPKCHFVLDRRINGKSPDGAHLILKKCPACGGEWSSTCPSCAQPLDMKLVRGLPHAVCCERKLDANVRAA
Ga0209139_100127461	3300027795	Bog Forest Soil	RHINGTSLDDAQLILKKCPACGGDWSSTCPACAHPLTVKLVGGLPFSVCCERKPATRARA
Ga0209656_100423633	3300027812	Bog Forest Soil	MERFLICNNPKCHFVLDRRVNGISLDGAQLILKKCPACDGDWSSTCPSCTRALAVKLVAGLPLSICCDRKPHADARAA
Ga0209274_100261982	3300027853	Soil	MERFLICNNPKCHFVLDRRINGKSLDGAQLILKKCPACGGDWSSICPSCTQALSMKLVAGLPHSVCCDRKSAANTRAA
Ga0209274_103445962	3300027853	Soil	MERFLICNNSKCHFVLDRRINGRSLDGAQLILKKCPACGGDWSSTCPSCAQTLVVKRVAGLPQSVCCDRKPDAGARAA
Ga0209274_107072051	3300027853	Soil	MERFLVCKNPKCHFVLDRRINGKSPDGAHLILKKCPACGGEWSSTCPSCAQPLDMKLVRGLPHAV
Ga0209693_100857422	3300027855	Soil	MERFLICNNSKCHFVLDRRINGRSLDGAQLILKKCPACGGGWSSTCPSCAHALAVKLVAGLPQSVCCDRKLAARARAA
Ga0209166_100082085	3300027857	Surface Soil	MERFLVCNNPKCHFVLDRRINGKSMDGAQVILKKCPSCGGDWSATCPSCSQPLVIKMVGGLPRSLCCERKASMKERAA
Ga0209168_100106203	3300027986	Surface Soil	MERFLICSNAKCRFVLDRRINGKSLDGAHLILKKCPDCGGDWSSTCPSCAQPLAMKLVAGLPQSACCDRKPKAAAQAA
Ga0265354_10000326	3300028016	Rhizosphere	MERFLVCNNPKCHFVLDRRINGKSLDGAQLIQKKCPSCGGDWSSICPSCTQTLAVKLVAGLPHSVCCDRKLHASARAA
Ga0265354_10016723	3300028016	Rhizosphere	MPRFLICNNPKCHFVLDRRINGKSLDGAQLIQKECPACGGDWSSICPSCTQTLAVKLVAGLPHSVCCDRKPHANARAA
Ga0308309_100012636	3300028906	Soil	MERFLICNNPKCHFVLDRRINGKSLDGAQLVLQKCPECGGDWSTTCPSCMQPLSMKLVGDLPHPVCCVSQSDAKTRAA
Ga0308309_100077783	3300028906	Soil	MERFLVCNNPSCHFVLDRRVNGKSQDGAQLILKKCPACGGNWSATCPSCAHSLAVKLVAGLPHAVCCDRKPHADARAA
Ga0308309_101704321	3300028906	Soil	MERFLVCNNPKCHFVLDRRINGKSLDGAQLIQKKCPSCGGDWSSICPSCAQTLAVKLVAGLPHSVCCDRKPDANARAA
Ga0308309_102303692	3300028906	Soil	MERFLICNDPKCQFVLDRRIDGKSLVGAHLILKKCPECGGNWSSTCPACAQPLAIKLVAGLPQSACCDRKANARAA
Ga0308309_105538292	3300028906	Soil	MERFLICSNPKCHFVLDRRINGGSSDGAQLILKKCPACGGGWSSTCPSCAHALAVKLVAGLPQSVCCDRKLA
Ga0307482_12298172	3300030730	Hardwood Forest Soil	LMERFVICNDPKCHFVLDRRINGKSLVSAQLILKKCPDCGADWSSTCPACARPLAMKLVAGLPQSACCDRKAKARAA
Ga0265745_10063512	3300030759	Soil	MERFLVCNNPKCHFVLDRRINGKSLDGAQLIQKECPACGGDWSSICPSCTQTLAVKLVAGLPHSVCCDRKPHANARAA
Ga0265773_10261811	3300031018	Soil	MPRFLICNNPKCHFVLDRRINGKSLDGAQLIQKKCPACGGDWSSICPSCTQSLAVKLVAGLPHSVCCDRKPHANARAA
Ga0310686_1009693435	3300031708	Soil	MPRFLICNNPKCHFVLDRRINGKSLDGAQLIQKKCPSCGGDWSSICPSCTQTLAVKLVAGLPHSVCC
Ga0310686_1084849732	3300031708	Soil	MERFLICNNPKCHFVLDRRINGTSLDGAQLILKKCPACGGDWSSTCPSCAQALAVRLVAGLPQSVCCDRKLAAGARAA
Ga0310686_1118458721	3300031708	Soil	SAQAYFYLAPSLKEAAPMERFLICNNSKCHFVLDRRINGKSLDGAQLILKKCPACGGDWSSTCPSCAQALVVKLAAGLPQSVCCDRKLAASARAA
Ga0310686_1147591214	3300031708	Soil	MERFLVCNNPSCHFVLDRRINGKSLDGAQLVLQKCPECGGDWSTTCPSCLQPVAMKLVGELPHPVCCSRQPAQKTRAA
Ga0307476_109115771	3300031715	Hardwood Forest Soil	MERFLICKNPKCRFVLDRYIDGKSLDGAHLILTKCPACGETWSTTCPSCARALAVKMVDGLPHSVCCDRRPAANARAA
Ga0307474_103627291	3300031718	Hardwood Forest Soil	MERFVICNDPKCHFVLDRRINGKSLVSAQLILKKCPDCGADWSSTCPACARPLAMKLVAGLPQSACCDRKAKARAA
Ga0307478_112317232	3300031823	Hardwood Forest Soil	MERFLVCKNPKCHFVLDRRINGQSVDGAHHILRKCPACGGAWSSDCPSCSQPLAMRMVGGIPQSVCCTGKMHTRARAA
Ga0307479_105476691	3300031962	Hardwood Forest Soil	MERFLICNNPKCHFVLDRRINGKSLDDAQLILTKCPACGGDWSSTCPSCAQPIAMKLVAGLPQSACCDRKLAADARAA
Ga0311301_103539044	3300032160	Peatlands Soil	MERFLVCKNPKCHFVLDRRINGQSVDGAHHILRKCPACGGAWSSNCPSCSQPLAMRLVGGIPHAVCCTGKTHTRARAA
Ga0307471_1000057233	3300032180	Hardwood Forest Soil	MERFMVCDNPGCRFILDRRINGKSLDGAQLILKKCPACGGNWSSACPSCNQPLATKLVDGLPHSVCCDRTPSAKFRAA
Ga0335074_100224295	3300032895	Soil	MERYLICENHKCRFILDRRIDGRSLDGAQILKKCPACGSDWTSTCPSCSLALAVKLVNGIPHTVCCDRKSNAKARAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063959

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences