Metagenome / Metatranscriptome Family F063937

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063937
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	48 residues
Representative Sequence	MRARTARWVAGCAAAGSVALIGGELALAYVDRHLVPASLTGWTVS
Number of Associated Samples	110
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.48 %
% of genes near scaffold ends (potentially truncated)	93.80 %
% of genes from short scaffolds (< 2000 bps)	83.72 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.039 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.233 % of family members)
Environment Ontology (ENVO)	Unclassified (23.256 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.062 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 54.79% β-sheet: 0.00% Coil/Unstructured: 45.21%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF01791	DeoC	6.20
PF03006	HlyIII	3.10
PF08349	DUF1722	2.33
PF01594	AI-2E_transport	2.33
PF12697	Abhydrolase_6	2.33
PF02687	FtsX	1.55
PF01370	Epimerase	1.55
PF07883	Cupin_2	1.55
PF13683	rve_3	1.55
PF00378	ECH_1	1.55
PF00486	Trans_reg_C	1.55
PF01546	Peptidase_M20	1.55
PF06736	TMEM175	1.55
PF07876	Dabb	0.78
PF13411	MerR_1	0.78
PF13304	AAA_21	0.78
PF00406	ADK	0.78
PF13358	DDE_3	0.78
PF00484	Pro_CA	0.78
PF11716	MDMPI_N	0.78
PF01872	RibD_C	0.78
PF00753	Lactamase_B	0.78
PF02518	HATPase_c	0.78
PF08241	Methyltransf_11	0.78
PF07730	HisKA_3	0.78
PF01812	5-FTHF_cyc-lig	0.78
PF07366	SnoaL	0.78
PF01425	Amidase	0.78
PF13460	NAD_binding_10	0.78
PF04978	DUF664	0.78
PF00589	Phage_integrase	0.78
PF12146	Hydrolase_4	0.78
PF00665	rve	0.78
PF13556	HTH_30	0.78
PF00581	Rhodanese	0.78
PF05016	ParE_toxin	0.78
PF01329	Pterin_4a	0.78
PF02909	TetR_C_1	0.78
PF00196	GerE	0.78
PF10590	PNP_phzG_C	0.78
PF05532	CsbD	0.78
PF13088	BNR_2	0.78
PF00106	adh_short	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	3.10
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	2.33
COG3272	Uncharacterized conserved protein YbgA, DUF1722 family	Function unknown [S]	2.33
COG3548	Uncharacterized membrane protein	Function unknown [S]	1.55
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.78
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.78
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.78
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.78
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.78
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.78
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.78
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.78
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.78
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.78
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	0.78
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.78
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.78
COG0563	Adenylate kinase or related kinase	Nucleotide transport and metabolism [F]	0.78
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.78
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.78
COG0212	5-formyltetrahydrofolate cyclo-ligase	Coenzyme transport and metabolism [H]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.04 %
Unclassified	root	N/A	44.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.04 %
Unclassified	root	N/A	44.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.04 %
Unclassified	root	N/A	44.96 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	48.06 %
Unclassified	root	N/A	44.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.09 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.55 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	29.46 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.55 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.96 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.30 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.33 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.33 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.55 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.55 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.55 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.78 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.78 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.30 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	1.55 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.55 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.55 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.55 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.78 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.78 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.78 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.78 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.30 %
Tersicoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Tersicoccus	1.55 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1.55 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.55 %
unclassified Streptomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → unclassified Streptomycetaceae	0.78 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.78 %
Pseudomonas putida group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas putida group	0.78 %
Tetrasphaera	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera	0.78 %
Streptosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium	0.78 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.30 %
Tersicoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Tersicoccus	1.55 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.55 %
Pseudomonas putida	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas putida group → Pseudomonas putida	0.78 %
Streptomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → unclassified Streptomycetaceae → Streptomycetaceae bacterium	0.78 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	0.78 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	0.78 %
Pseudonocardia pini	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia pini	0.78 %
Streptosporangium subroseum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium subroseum	0.78 %
Tetrasphaera japonica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera → Tetrasphaera japonica	0.78 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.30 %
Tersicoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Tersicoccus	1.55 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.55 %
Pseudonocardia sp. Ae356_Ps1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. Ae356_Ps1	0.78 %
Mycobacterium sp. JS623	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. JS623	0.78 %
Tetrasphaera japonica T1-X7	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera → Tetrasphaera japonica → Tetrasphaera japonica T1-X7	0.78 %
Pseudomonas putida	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas putida group → Pseudomonas putida	0.78 %
Streptomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → unclassified Streptomycetaceae → Streptomycetaceae bacterium	0.78 %
Pseudonocardia pini	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia pini	0.78 %
Streptosporangium subroseum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium subroseum	0.78 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573002\|GZIGXIF01AQB7R	Not Available	522	Open in IMG/M
3300000956\|JGI10216J12902_114948462	Not Available	606	Open in IMG/M
3300003219\|JGI26341J46601_10104642	Not Available	822	Open in IMG/M
3300004016\|Ga0058689_10060167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	725	Open in IMG/M
3300005332\|Ga0066388_108414491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	514	Open in IMG/M
3300005332\|Ga0066388_108550539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas putida group → Pseudomonas putida	509	Open in IMG/M
3300005344\|Ga0070661_100787716	Not Available	779	Open in IMG/M
3300005436\|Ga0070713_100118145	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2321	Open in IMG/M
3300005437\|Ga0070710_10034220	All Organisms → cellular organisms → Bacteria	2764	Open in IMG/M
3300005439\|Ga0070711_101340430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300005457\|Ga0070662_100064317	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2686	Open in IMG/M
3300005471\|Ga0070698_100201357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1927	Open in IMG/M
3300005534\|Ga0070735_10469834	Not Available	750	Open in IMG/M
3300005534\|Ga0070735_10728028	Not Available	586	Open in IMG/M
3300005536\|Ga0070697_101862767	Not Available	538	Open in IMG/M
3300005537\|Ga0070730_10004243	All Organisms → cellular organisms → Bacteria	12658	Open in IMG/M
3300005610\|Ga0070763_10353014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. JS623	819	Open in IMG/M
3300005764\|Ga0066903_108448312	All Organisms → cellular organisms → Bacteria → Terrabacteria group	525	Open in IMG/M
3300005842\|Ga0068858_102179077	Not Available	548	Open in IMG/M
3300006028\|Ga0070717_10530877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Tersicoccus	1065	Open in IMG/M
3300006028\|Ga0070717_11007537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera → Tetrasphaera japonica → Tetrasphaera japonica T1-X7	759	Open in IMG/M
3300006028\|Ga0070717_11465439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300006052\|Ga0075029_101166435	Not Available	537	Open in IMG/M
3300006175\|Ga0070712_100073086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2458	Open in IMG/M
3300006175\|Ga0070712_101687069	Not Available	554	Open in IMG/M
3300006604\|Ga0074060_11274020	Not Available	512	Open in IMG/M
3300006806\|Ga0079220_11724209	Not Available	549	Open in IMG/M
3300006854\|Ga0075425_100134589	All Organisms → cellular organisms → Bacteria	2826	Open in IMG/M
3300006854\|Ga0075425_102012337	Not Available	646	Open in IMG/M
3300006871\|Ga0075434_100127046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2566	Open in IMG/M
3300009089\|Ga0099828_11424062	Not Available	612	Open in IMG/M
3300009162\|Ga0075423_10143509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2507	Open in IMG/M
3300009162\|Ga0075423_12514079	Not Available	562	Open in IMG/M
3300010043\|Ga0126380_10138621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1536	Open in IMG/M
3300010043\|Ga0126380_10344450	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300010048\|Ga0126373_12046235	Not Available	635	Open in IMG/M
3300010360\|Ga0126372_12712628	Not Available	547	Open in IMG/M
3300010375\|Ga0105239_10329460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1722	Open in IMG/M
3300010375\|Ga0105239_11607173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	752	Open in IMG/M
3300010375\|Ga0105239_11820828	Not Available	705	Open in IMG/M
3300010397\|Ga0134124_11914309	Not Available	629	Open in IMG/M
3300010398\|Ga0126383_13086323	Not Available	544	Open in IMG/M
3300011119\|Ga0105246_11184976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	702	Open in IMG/M
3300012201\|Ga0137365_10034937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3851	Open in IMG/M
3300012201\|Ga0137365_11365619	Not Available	500	Open in IMG/M
3300012208\|Ga0137376_10281753	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300012944\|Ga0137410_11759279	Not Available	546	Open in IMG/M
3300012955\|Ga0164298_10391570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	895	Open in IMG/M
3300012985\|Ga0164308_10737776	Not Available	853	Open in IMG/M
3300013100\|Ga0157373_10632041	Not Available	781	Open in IMG/M
3300016294\|Ga0182041_10450658	Not Available	1106	Open in IMG/M
3300016422\|Ga0182039_10062366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2594	Open in IMG/M
3300017942\|Ga0187808_10162816	Not Available	986	Open in IMG/M
3300017959\|Ga0187779_10962339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590	Open in IMG/M
3300017966\|Ga0187776_10161487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium subroseum	1385	Open in IMG/M
3300017972\|Ga0187781_10209003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1377	Open in IMG/M
3300017974\|Ga0187777_10868440	Not Available	647	Open in IMG/M
3300017999\|Ga0187767_10227222	Not Available	603	Open in IMG/M
3300018001\|Ga0187815_10399189	Not Available	585	Open in IMG/M
3300018058\|Ga0187766_10294533	Not Available	1049	Open in IMG/M
3300018064\|Ga0187773_10592877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	676	Open in IMG/M
3300018089\|Ga0187774_10075413	All Organisms → cellular organisms → Bacteria	1587	Open in IMG/M
3300018433\|Ga0066667_10036756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2822	Open in IMG/M
3300018433\|Ga0066667_10059637	All Organisms → cellular organisms → Bacteria	2352	Open in IMG/M
3300020581\|Ga0210399_10768596	Not Available	788	Open in IMG/M
3300020582\|Ga0210395_10503164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia pini	912	Open in IMG/M
3300021171\|Ga0210405_10281432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. Ae356_Ps1	1315	Open in IMG/M
3300021171\|Ga0210405_10536032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	915	Open in IMG/M
3300021377\|Ga0213874_10232050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	674	Open in IMG/M
3300021401\|Ga0210393_10519863	All Organisms → cellular organisms → Bacteria → Terrabacteria group	972	Open in IMG/M
3300021404\|Ga0210389_10236216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1429	Open in IMG/M
3300021404\|Ga0210389_11292032	All Organisms → cellular organisms → Bacteria → Terrabacteria group	559	Open in IMG/M
3300021405\|Ga0210387_11305792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Tersicoccus	627	Open in IMG/M
3300021406\|Ga0210386_11337761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	602	Open in IMG/M
3300021407\|Ga0210383_11287150	All Organisms → cellular organisms → Bacteria → Terrabacteria group	612	Open in IMG/M
3300021407\|Ga0210383_11775014	All Organisms → cellular organisms → Bacteria → Terrabacteria group	503	Open in IMG/M
3300021420\|Ga0210394_10297364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1416	Open in IMG/M
3300021432\|Ga0210384_10792899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	845	Open in IMG/M
3300021478\|Ga0210402_10277773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1549	Open in IMG/M
3300021560\|Ga0126371_11732211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	748	Open in IMG/M
3300022724\|Ga0242665_10282053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300025898\|Ga0207692_11113094	Not Available	523	Open in IMG/M
3300025906\|Ga0207699_10092404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1902	Open in IMG/M
3300025916\|Ga0207663_10012667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4566	Open in IMG/M
3300025916\|Ga0207663_10315637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1173	Open in IMG/M
3300025929\|Ga0207664_10038773	All Organisms → cellular organisms → Bacteria	3696	Open in IMG/M
3300027029\|Ga0208731_1004015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1370	Open in IMG/M
3300027080\|Ga0208237_1023327	Not Available	932	Open in IMG/M
3300027521\|Ga0209524_1035376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1047	Open in IMG/M
3300028807\|Ga0307305_10533929	Not Available	524	Open in IMG/M
3300028828\|Ga0307312_10360289	Not Available	952	Open in IMG/M
3300028906\|Ga0308309_10493148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1058	Open in IMG/M
3300030013\|Ga0302178_10299851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	739	Open in IMG/M
3300030490\|Ga0302184_10175401	Not Available	914	Open in IMG/M
3300030706\|Ga0310039_10343252	Not Available	558	Open in IMG/M
3300031640\|Ga0318555_10657077	Not Available	567	Open in IMG/M
3300031668\|Ga0318542_10659318	Not Available	547	Open in IMG/M
3300031679\|Ga0318561_10009623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4161	Open in IMG/M
3300031680\|Ga0318574_10532390	Not Available	689	Open in IMG/M
3300031719\|Ga0306917_11573934	Not Available	505	Open in IMG/M
3300031744\|Ga0306918_10141393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1768	Open in IMG/M
3300031747\|Ga0318502_10532990	Not Available	705	Open in IMG/M
3300031748\|Ga0318492_10081895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1562	Open in IMG/M
3300031748\|Ga0318492_10294572	Not Available	844	Open in IMG/M
3300031751\|Ga0318494_10395575	Not Available	801	Open in IMG/M
3300031754\|Ga0307475_10191672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1633	Open in IMG/M
3300031778\|Ga0318498_10321418	Not Available	693	Open in IMG/M
3300031779\|Ga0318566_10278392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	828	Open in IMG/M
3300031793\|Ga0318548_10072652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1611	Open in IMG/M
3300031799\|Ga0318565_10317068	Not Available	757	Open in IMG/M
3300031805\|Ga0318497_10528704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	661	Open in IMG/M
3300031833\|Ga0310917_10565188	Not Available	773	Open in IMG/M
3300031835\|Ga0318517_10053803	Not Available	1692	Open in IMG/M
3300031835\|Ga0318517_10583581	Not Available	502	Open in IMG/M
3300031879\|Ga0306919_10073251	Not Available	2340	Open in IMG/M
3300031897\|Ga0318520_10807931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300031947\|Ga0310909_10808136	Not Available	774	Open in IMG/M
3300031954\|Ga0306926_10963913	Not Available	1017	Open in IMG/M
3300031981\|Ga0318531_10590920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	503	Open in IMG/M
3300032054\|Ga0318570_10042351	Not Available	1860	Open in IMG/M
3300032060\|Ga0318505_10031866	Not Available	2156	Open in IMG/M
3300032063\|Ga0318504_10621203	Not Available	519	Open in IMG/M
3300032064\|Ga0318510_10222173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → unclassified Streptomycetaceae → Streptomycetaceae bacterium	769	Open in IMG/M
3300032065\|Ga0318513_10025551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2512	Open in IMG/M
3300032180\|Ga0307471_103278289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	574	Open in IMG/M
3300033158\|Ga0335077_11141588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	767	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.37%
Host-Associated	Host-Associated	11.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.27%
Plants	Host-Associated → Plants	11.63%
Aquatic	Environmental → Aquatic	3.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.30%
Freshwater	Environmental → Aquatic → Freshwater	2.33%
Peat	Environmental → Terrestrial → Peat	1.55%
Sediment	Environmental → Aquatic → Sediment	0.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.78%
Roots	Host-Associated → Plants → Roots	0.78%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.14%
Loam	Environmental → Terrestrial → Soil → Loam	18.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.98%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.78%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.33%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.10%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.88%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.55%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.55%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.78%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573002	Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027029	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF045 (SPAdes)	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FE1_00233080	2189573002	Grass Soil	MRVRTARWVAGGVAVVSVALIVAALALAYVDRHLPAGRTAW
JGI10216J12902_1149484621	3300000956	Soil	MRVLTARWVAGCIAAGSIALVAGALVLEYVDRDLLPASMTGW
JGI26341J46601_101046423	3300003219	Bog Forest Soil	MRARTARWVAGCAAAGSLALMVGGLILAYVDRHLVPAHVTN
Ga0058689_100601672	3300004016	Agave	MRVRTARRVAGCAAAVSAALMIGALALAYVDRHRVPAGLTGWN
Ga0066388_1084144912	3300005332	Tropical Forest Soil	MRARTARWVAGCAAVVSVALIGGGLVLACVDRALVPVSLTGWTFSNVSG
Ga0066388_1085505391	3300005332	Tropical Forest Soil	MPVRARPARWVPGCAAAGSVALIGGELALAYLDRHLLPASLTGWTFSGIFTQVVNVA
Ga0070661_1007877161	3300005344	Corn Rhizosphere	MRVLTARSVAGCVAAASVMLGFGGLALAYVDRHLLPAGLTNWDF
Ga0070713_1001181451	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRVLTARSVAGCAAAASVTLGFGGLALAYVDRHLLPARLTNWDFSYVIWEVVSLA
Ga0070710_100342204	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRARTARLVAGCAAAASVMLGLGALSLAYVDCHLVPARLTQWFL*
Ga0070711_1013404301	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRVQTSRWVAGCAAAVSVALIAGALVLAYADRRLLPADLTGWNFSDVFDGVANLA
Ga0070662_1000643171	3300005457	Corn Rhizosphere	MRSRTVRWAAGCAAVGSVALGAAALALGYVDRHRVPAGLTAWDFS
Ga0070698_1002013575	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRARTARWVTGCAAAVSVALIGGGLVLAYMDRHLVPASLTDWTVSNISGQVVNVAVPVAGFV
Ga0070735_104698341	3300005534	Surface Soil	MRARTAGLVAGCVAAGSLALMAGGLFLAYVDRHLVPASLTYWDFSDVF
Ga0070735_107280281	3300005534	Surface Soil	VRARMARLVAGCAAAGSLALMAGGLILTYVDRHLVPAGMAGWDVSD
Ga0070697_1018627673	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRVQTSRWVAGCAAAVSVALIAGALVLAYADRRLLPADLTGWNFS
Ga0070730_1000424312	3300005537	Surface Soil	MRVRTARWVAGCSAAGSVALIGGGLALAYVDRKLVPASLVG*
Ga0070763_103530141	3300005610	Soil	MRARTARWVAGCAAAGSVALLGAGLVLAYVDRHLVPASLANWTVSNISGQVV
Ga0066903_1084483121	3300005764	Tropical Forest Soil	MRARTAGWVAGGIAVGSLALMAAGMALAYVDRHALPA
Ga0068858_1021790771	3300005842	Switchgrass Rhizosphere	MRVLTARWVAGCAAAASVALEFGGLALAYVDRHLLPARLTTWDFSDVFG
Ga0070717_105308772	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VRAQTAQWVAGCTAAGSVALIGGGVALAYLNRQLVPASLTGWTVSNISEQVVN
Ga0070717_110075371	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRVLTARWVAGCAAAASVTLELGGLALAYVDRHLLPARLTTWDFSDVFG
Ga0070717_114654393	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKVQTSRWVAGCAAAVSVALIAGAPVLAYADRRLLPADLTGWNFSDVFDGV
Ga0075029_1011664351	3300006052	Watersheds	MAVTGGRDIQVRARTARWVAGCVAAVSVALIGSGLVLAYAHRHLAPASMTGWTVSNISAQVV
Ga0070712_1000730866	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRVLTARWVAGCAAGMSVAVIAGGLAWAYVDRHLVPADMMRWNISDAFGEVVNLAI
Ga0070712_1016870691	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MVGMAMRVLTVRWVAGCAAVGSVVLGAGALALAYVDRHRVPAGLTAWDF
Ga0074060_112740201	3300006604	Soil	MRVLTARWVAGCIAAGSIALMAGALVLEYVDRDLLPASMTGW
Ga0079220_117242092	3300006806	Agricultural Soil	MRVRTARWVAGWAAAASVTLIVGGVVLACLDRHLVPASLTGWTVSNVCD
Ga0079220_118983761	3300006806	Agricultural Soil	MSARTAPRVAGCVAAGSLALMAGGLILAYADRHLVPANVTSWDVSDVFGDVVNM
Ga0075425_1001345893	3300006854	Populus Rhizosphere	MRVLTARWVAGCAAAASVALESGGLALAYVDRHLLPARLTTWDFSDVS
Ga0075425_1020123371	3300006854	Populus Rhizosphere	MRVLTARWVAGCAAGMAVALIVGGLAWAYVHQHLVPADMMRWNVS
Ga0075434_1001270464	3300006871	Populus Rhizosphere	MRVLTARWVAGCAAAASVTLELGGLALAYVDRHLLPARLTTWDFSDVS
Ga0099828_114240622	3300009089	Vadose Zone Soil	MRPRTARWVAGCAAAGAVALIGGGLAMAYVSRHLVPASLTGWTFSDATNGGPAVQ
Ga0075423_101435093	3300009162	Populus Rhizosphere	MAMRVLTARWVAGCAAAASVTLELGGLALAYVDRHLLPARLTTWDFSDVS
Ga0075423_125140791	3300009162	Populus Rhizosphere	MVGMAMKVVTVRWVAGCAAVGSVALMAGALVLTYVDRHLVPADMAGWNFSGVFEG
Ga0126374_115200491	3300009792	Tropical Forest Soil	MRVLTARRVAGGAAAASVALIAGALALAYLDRHHV
Ga0126380_101386211	3300010043	Tropical Forest Soil	MRGLTARLVAGCAAAASAALMAGTLALVYADRHLLPAR
Ga0126380_103444501	3300010043	Tropical Forest Soil	MGGRTARWVAGSVAAASLALMISGLALTYADRHLVSAS
Ga0126373_120462351	3300010048	Tropical Forest Soil	MAMRVLTARWVAGCIAAGSIALMVGALLLEYVDRDLLPASM
Ga0126372_127126281	3300010360	Tropical Forest Soil	MAMRVLTVRWVAGCAAVGSAALGAGALSLAYVDRHRVPAGLTAWDFSN
Ga0105239_103294601	3300010375	Corn Rhizosphere	MRVQTTRWVAGCAAAVSVALIASAVLLAYADRHRLPADLTGWNFSDVFDGV
Ga0105239_116071731	3300010375	Corn Rhizosphere	VAGCAAAASVALEFGGLALAYVDRRLLPARLTTWDFSDVS
Ga0105239_118208281	3300010375	Corn Rhizosphere	MTMRVLAARWVAGCIAAGSIALMAGALALEYVDRDLLPASMRGWT
Ga0134124_119143092	3300010397	Terrestrial Soil	MTMRVLTARSVAGCAAAASVTLGFGGLALAYVDRHLLPARLTNWDFSYVIWE
Ga0126383_130863231	3300010398	Tropical Forest Soil	MRVQTARWVAGCAAVVSAALIAGALLLAYADRDLLRGDLTGWNFSDVFDGVANLAVP
Ga0105246_111849761	3300011119	Miscanthus Rhizosphere	MRVQTSRWVAGCAAAVSVALIAGAPVLAYADRRLLPADLTGWNFSDVFDGVANLAVPMVG
Ga0137365_100349371	3300012201	Vadose Zone Soil	MGMSVLTARWVAGCAAAVSVALIAGALALTYVDRHLVPAGMTGWD
Ga0137365_113656191	3300012201	Vadose Zone Soil	MRVLTARWVAGCAAAVSVALIAGALALTYVDRHLVPAGMTGWD
Ga0137376_102817532	3300012208	Vadose Zone Soil	MAMRVLTARWVAGCAAAVSVALMAGGLAWAYVDRHLVPADLASWNLSDVFGEVV
Ga0137410_117592791	3300012944	Vadose Zone Soil	MAMRVLTARWVAGCAAAASVALEFGGLALAYVDRRLLPARLTAWDFSDVFADVVNLAIPV
Ga0164298_103915701	3300012955	Soil	MRVQTSRWVAGCAAAVSVALIAGALVLAYADRRLLPADLTGWNFSDV
Ga0164308_107377762	3300012985	Soil	MAMRVLTARWVAGCAAGVSVALITGGLAWAYVDRHLVPADMMKWNISEAF
Ga0157373_106320412	3300013100	Corn Rhizosphere	VAGSAAAASVTLGLGGLALAYADRDLLPARLTTWDFSYVIWEVV
Ga0182041_104506582	3300016294	Soil	MKARTARWVAGCAAAASVALLGAGMVLAYVDRQLVPASLTGWTVSNV
Ga0182039_100623664	3300016422	Soil	MKARTARWVAGCAAAASVALLGAGLVLAYVDRQLVPASLTGWTVSNVSGQVVNMAVPVSG
Ga0187808_101628162	3300017942	Freshwater Sediment	MRARTARWVAGCAAAGSVALMGGGLALTYVDRHLVPATLTNWTVSGVSGQ
Ga0187779_109623391	3300017959	Tropical Peatland	MRVGTARWVAGCATAASVALIIGGLALAYADRHLVPARLQVWDFSDVF
Ga0187776_101614871	3300017966	Tropical Peatland	MRVLTVRWAAGCAAVGSAALGAGALSLAYVDRHRVPAGLTAWD
Ga0187781_102090031	3300017972	Tropical Peatland	MRARTARWVAGCTAAVSVALIGCGLALAFVDRHLLPASMTDWTVSGVSGQVVNMAVPVTGFVL
Ga0187777_108684401	3300017974	Tropical Peatland	MRGRTARWVAGCAAAGSVTLIGAGLALAYVDRQLVPASLTGWTVSNIS
Ga0187767_102272221	3300017999	Tropical Peatland	VRAWAVRWVPGCAAAVSVALIGAGLMLAYVDRLLLPAS
Ga0187815_103991891	3300018001	Freshwater Sediment	MRARTVRWVAGCAAAGSVALIGGGVALAYADRHLVPASLTGWTVSNISQQVVN
Ga0187766_102945332	3300018058	Tropical Peatland	MRARTARWVVRCAAAGSVALISGGLALAYVNRQLVPASLAGWTVSNIS
Ga0187773_105928771	3300018064	Tropical Peatland	MRVQTTRWVAGCATAVSVALIAGALLLAYADRHQVPADLTGWNFSNVFDGLANL
Ga0187774_100754131	3300018089	Tropical Peatland	MRVLTARWVAGCIAAVSVALLAGALVLEYVDRDLLPASMTG
Ga0066667_100367563	3300018433	Grasslands Soil	MRVLTARWVAGCAAGISVALIAGGLAWAYVDRHLVPTDRMGWNIPTPSEKW
Ga0066667_100596375	3300018433	Grasslands Soil	MRAQTARWVAGCIAAGSVALIVAGLVLAYVDRHPLPAGVTSWDWPTSSRTW
Ga0210399_107685961	3300020581	Soil	MRVRTARWVAGCTAAGSVVLIGGGVALAFADRHLVPASLTGWTVSN
Ga0210395_105031641	3300020582	Soil	VRARTGRWVPRCTAAGSVALLGAGLVLAYVDRHLVPASLTGWTVSNVSGQVV
Ga0210405_102814321	3300021171	Soil	MRAGTVRWVAGCAAAGSLALMAGGLILAYVDRHLVPASVTYWDFSD
Ga0210405_105360321	3300021171	Soil	MSARTAPRVAGFVAAGSLALMAGGLILAYADRHLVPA
Ga0213874_102320501	3300021377	Plant Roots	MRAGTVRRVAGCAAAGSVALIGAGMVLAYVDRHLASASVTGWTVSNI
Ga0210393_105198632	3300021401	Soil	VTALTARWVPRCAAAGSVALLGAGLVLACVDRHLVPASLGNWTVSNISGQVVNMAVPVTGFVL
Ga0210389_102362165	3300021404	Soil	MRARTARWVAGCAAAGSVALIGGELALAYVDRHLVPASLTGWTVS
Ga0210389_112920322	3300021404	Soil	MGARTARWMAGCAAAGSVALIGGGLALAYVDRHLVPASLADWTVSNVSGQLVNMAVPVTG
Ga0210387_113057921	3300021405	Soil	VRARTAQWVAGCTAAGSIALIGGGVALAYLNRHLVPASLTGWTVSNISAQ
Ga0210386_113377612	3300021406	Soil	MSARTAPRVAGCVAAGSLALMAGGLILAYADRHLVPANVTSWD
Ga0210383_112871501	3300021407	Soil	VTALTARWVPRCAAAGSVALLGAGLVLAYVDRHLVPASLGNWTVSNIS
Ga0210383_117750141	3300021407	Soil	MRARTARWVAGCAAGGSVALIGGGLALAYMDRHLVPASLA
Ga0210394_102973642	3300021420	Soil	MRARTARWVAGCAAAGSVALIGGELALAYVDRHLVP
Ga0210384_107928991	3300021432	Soil	MRAGTVRWVAGCAAAGSLALMAGGLILAYVDRHLVPASVTY
Ga0210402_102777731	3300021478	Soil	MKVLTVRWVAGCAALGSAALMAGALVLTYVDRHRVPAGQTG
Ga0126371_117322111	3300021560	Tropical Forest Soil	MRVLTARWVSGCAAAGSVALMAGGLALVYADRHLLPARLTGWNFSDV
Ga0242665_102820532	3300022724	Soil	MRARTARWVTGCAAAVSVALIGGGLVLAYVDRHLVPASLTDRT
Ga0207692_111130941	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKVQTSRWVAGCAAAVSVALIAGAPVLAYADRRLLPADLTGWNFSDVFD
Ga0207699_100924044	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MRVLTARWVAGCAAAASVALEFGGLALAYVDRHLL
Ga0207663_100126675	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRVQTSRWVAGCAAAVSVALITGAPVLAYADRRLLPADLTGWNFSDVFDGVANLAVP
Ga0207663_103156372	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRVLTTRWVAGCAAAASVALEFGGLALAYVDRRLLPARLTTWD
Ga0207664_100387732	3300025929	Agricultural Soil	MRARTARLVAGCAAAASVMLGLGALSLAYVDCHLVPARLTQWFL
Ga0208731_10040151	3300027029	Forest Soil	MRAGTVRWVAGCAAAGSLALMAGGLILAYVDRHLVPASV
Ga0208237_10233272	3300027080	Forest Soil	MRARTAGWVAGCVAAGSLALMAGGLILAYVDRHLV
Ga0208099_10208321	3300027096	Forest Soil	VRARMARLVAGCAAAGSLALMAGGLILTYVDRHLVPAGMADWDVSDVFGDVVNMAIP
Ga0209524_10353761	3300027521	Forest Soil	MSPRTAPRVAGCVAAGSLALMAGGLILAYADRHLVPADVT
Ga0307305_105339292	3300028807	Soil	MRSRTVRWAAGCAAVASVALGAGALALAYVDRHRVPAGLTAWDFSNVFG
Ga0307312_103602891	3300028828	Soil	MRVLTARWVAGCAAAASVALEFGGLALAYVDRRLLPARLTTWDF
Ga0308309_104931481	3300028906	Soil	MRARTARWVAGCAAAGSVALLGAGLVLAYVDRHLVPASLANWTVSNI
Ga0302178_102998513	3300030013	Palsa	MRARSAWRVAGCAAASSVVLIGGGLALAYVDRHLVPASQTGWTAANISGQVFLLFP
Ga0302184_101754012	3300030490	Palsa	MRAQTASRVAGCAAAGSVALIGGGLALAYVDRHLVPASQTGWTASNISGQVVRDGG
Ga0310039_103432521	3300030706	Peatlands Soil	VAGCTAAGSVTLIGAGVALAYADRHLVPASLTGSTVS
Ga0318555_106570771	3300031640	Soil	MRARTARWVAGGVAVGSLALMAGGMALAYVDRHALP
Ga0318542_106593181	3300031668	Soil	MRVLTARRVAGGVAAASVALIAGGLALAYVDRHLPAGRTAWNFSA
Ga0318561_100096235	3300031679	Soil	MKARTARWVAGCAAAASVALLGAGLVLAYVDRQLVPASLTGWTVSNVSSQ
Ga0318574_105323902	3300031680	Soil	VRARTARPVAGCAAAGSLALMAGGSILAYVDRHLVPASMTAWDFS
Ga0306917_115739342	3300031719	Soil	VRARTARWVAGCVAAGSLALMVGGVILAYADRHLVPASVT
Ga0306918_101413934	3300031744	Soil	MRARTARWVAGGVAVGSLALMAGGMALAYVDRHALPAG
Ga0318502_105329901	3300031747	Soil	VKARTARWVAGSIAAGSVALMAGGLALAYADRHLVPAGLTNWDF
Ga0318492_100818951	3300031748	Soil	VRARTARWVAGCVAAGSLALMAGGVILAYADRHLVPASVTSWDVSDVFGD
Ga0318492_102945722	3300031748	Soil	MRVLTARRVAGGVAATSVALIVGGLALAYVDRHLPAGRTAWNFSAVFGGVADLAVPVVGF
Ga0318494_103955751	3300031751	Soil	MRVLTARRVAGGVAATSVALIVGGLALAYVDRHLPAGRT
Ga0307475_101916721	3300031754	Hardwood Forest Soil	VRAHAARWVAGCTAAGSVTLIGAGVALAYADRDLVPASSTGWTVSNLSGQI
Ga0318498_103214181	3300031778	Soil	MRARTARWVAGCAAAGSVALTGGGLALAYVDRQLVPASQTGWTVSNT
Ga0318566_102783922	3300031779	Soil	MRVASARWVAGCTGAVSVALIAGGLALAYVDRHQPAGRTAWNFSAVFGGVADL
Ga0318548_100726521	3300031793	Soil	MRVASARWVAGCTGAVSVALIAGGLALAYVDRHQPAGRTAWNFSAVFGGVADLAVPVVGF
Ga0318565_103170682	3300031799	Soil	MRVLTARRVAGGVAATSVALIAGGLALAYVDRHLPAGRTAWNFSAVFGGVA
Ga0318497_105287042	3300031805	Soil	VRARTARWVAGCVAAGSLALMVGGVILAYADRHLVPASVTSWGVSDVF
Ga0310917_105651882	3300031833	Soil	VRARTARPVAGCAAAGSLALMAGGSILAYVDRHLVPASMTAWDFSDVFGD
Ga0318517_100538031	3300031835	Soil	MKARTARWVAGCAAAASVALLGAGLVLAYVDRQLVPASLTGWTVSNVSSQLVNMAVPV
Ga0318517_105835811	3300031835	Soil	MRVLTARRVAGGVAATSVALIAGGLALAYVDRHLPAGRTAWNFSAVFG
Ga0306919_100732513	3300031879	Soil	MTARTARWVAGCAAAASVALLGAGLVLSYVDRQLVPASLTGWTVSNVSGQVVNMAVPVSGFVL
Ga0318520_108079312	3300031897	Soil	MRVASARWVAGCTGAVSVALIAGGLALAYVDRHLPAGRTAWNFSTVFGGVADL
Ga0310909_108081361	3300031947	Soil	MKARTARWVAGCAAAASVALLGAGLVLAYVDRQLVPASLTGWTVSNVSSQLVNMAVPVTGFVL
Ga0306926_109639132	3300031954	Soil	MRVLTARRVAGGVAATSVALIAGGLALAYVDRHLPAGRTAWNFSAVFGGM
Ga0318531_105909201	3300031981	Soil	MRARTAQLVAGFVAAGSLALMIGGLILAYVDRHLVPANVTYWD
Ga0318570_100423514	3300032054	Soil	MKARTARWVAGCAAAASVALLGAGLVLAYVDRQLVPASLTGWTVSNVSSQLVN
Ga0318505_100318664	3300032060	Soil	MKARTARWVAGCAAAASVALLGAGLVLAYVDRQLVPASLTGWTVSNVSSQLVNMA
Ga0318504_106212031	3300032063	Soil	MRVLTARRVAGGVAATSVALIVGGLALAYVDRHLP
Ga0318510_102221731	3300032064	Soil	MTARTARWVAGCAAAASVALLGAGLVLSYVDRQLVPASLTGWTVSNVSGQVVN
Ga0318513_100255514	3300032065	Soil	VRARTARPVAGCAAAGSLALMAGGSILAYVDRHLVPASMTAWDFSDVFGDVVNMA
Ga0307471_1032782892	3300032180	Hardwood Forest Soil	MRARTARWVAGGIAAGSVALMAAGLVQAYVDRPPLPAGETSLDW
Ga0335077_111415882	3300033158	Soil	MRARTARWVPGCAAAVAVALIGGGLALAYLDRHLVPASLTGWTFS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063937

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences