Metagenome / Metatranscriptome Family F063916

Basic Information
Family ID	F063916
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	44 residues
Representative Sequence	RAIPVGVIEISDQQTRFVPITDRKKLTGAVLAGIGFGMWLGWRRRR
Number of Associated Samples	116
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.69 %
% of genes near scaffold ends (potentially truncated)	92.25 %
% of genes from short scaffolds (< 2000 bps)	90.70 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Bacteria (89.922 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.279 % of family members)
Environment Ontology (ENVO)	Unclassified (24.806 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.364 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.08% β-sheet: 0.00% Coil/Unstructured: 68.92%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF01554	MatE	5.43
PF00072	Response_reg	2.33
PF00581	Rhodanese	2.33
PF00069	Pkinase	2.33
PF02735	Ku	1.55
PF12222	PNGaseA	1.55
PF02954	HTH_8	0.78
PF16925	TetR_C_13	0.78
PF01558	POR	0.78
PF00144	Beta-lactamase	0.78
PF04945	YHS	0.78
PF07494	Reg_prop	0.78
PF02321	OEP	0.78
PF07676	PD40	0.78
PF00990	GGDEF	0.78
PF00166	Cpn10	0.78
PF10012	DUF2255	0.78
PF01553	Acyltransferase	0.78
PF02518	HATPase_c	0.78
PF01070	FMN_dh	0.78
PF07311	Dodecin	0.78
PF01068	DNA_ligase_A_M	0.78
PF00903	Glyoxalase	0.78
PF08238	Sel1	0.78
PF02812	ELFV_dehydrog_N	0.78
PF13519	VWA_2	0.78
PF13432	TPR_16	0.78
PF04055	Radical_SAM	0.78
PF07498	Rho_N	0.78
PF13022	HTH_Tnp_1_2	0.78
PF07228	SpoIIE	0.78
PF11154	DUF2934	0.78
PF12732	YtxH	0.78
PF00578	AhpC-TSA	0.78
PF12705	PDDEXK_1	0.78
PF03050	DDE_Tnp_IS66	0.78
PF03544	TonB_C	0.78
PF00982	Glyco_transf_20	0.78
PF13360	PQQ_2	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	9.30
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	1.55
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.55
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.78
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.78
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.78
COG3292	Periplasmic ligand-binding sensor domain	Signal transduction mechanisms [T]	0.78
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.78
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.78
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.78
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.78
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.78
COG1014	Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, gamma subunit	Energy production and conversion [C]	0.78
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.78
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.78
COG0334	Glutamate dehydrogenase/leucine dehydrogenase	Amino acid transport and metabolism [E]	0.78
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.78

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.92 %
Unclassified	root	N/A	10.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.92 %
Unclassified	root	N/A	10.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.92 %
Unclassified	root	N/A	10.08 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	33.33 %
Unclassified	root	N/A	10.08 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	16.28 %
Unclassified	root	N/A	10.08 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.65 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.55 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.28 %
Unclassified	root	N/A	10.08 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.65 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.55 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.28 %
Unclassified	root	N/A	10.08 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.55 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.78 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.28 %
Unclassified	root	N/A	10.08 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.55 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.78 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.78 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.78 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.28 %
Unclassified	root	N/A	10.08 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.55 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.78 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.78 %
Rhodopila globiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	0.78 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002G5L0T	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300001100\|JGI12703J13194_108548	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300002245\|JGIcombinedJ26739_100627289	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300002245\|JGIcombinedJ26739_101007313	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300003505\|JGIcombinedJ51221_10256123	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300004092\|Ga0062389_100091195	All Organisms → cellular organisms → Bacteria	2656	Open in IMG/M
3300004633\|Ga0066395_10179077	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300005175\|Ga0066673_10588298	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300005184\|Ga0066671_10233854	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300005334\|Ga0068869_100209559	All Organisms → cellular organisms → Bacteria → Acidobacteria	1540	Open in IMG/M
3300005468\|Ga0070707_101222052	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300005518\|Ga0070699_101078179	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300005534\|Ga0070735_10487676	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300005534\|Ga0070735_10800724	Not Available	555	Open in IMG/M
3300005541\|Ga0070733_10444841	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300005542\|Ga0070732_10720017	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300005555\|Ga0066692_10968134	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005556\|Ga0066707_10721222	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300005559\|Ga0066700_10706509	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300005575\|Ga0066702_10053465	Not Available	2179	Open in IMG/M
3300005586\|Ga0066691_10078512	All Organisms → cellular organisms → Bacteria	1823	Open in IMG/M
3300006028\|Ga0070717_10028614	All Organisms → cellular organisms → Bacteria	4462	Open in IMG/M
3300006102\|Ga0075015_100082036	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300006175\|Ga0070712_100711965	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300006176\|Ga0070765_100686597	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300006358\|Ga0068871_101913582	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300006800\|Ga0066660_10214102	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300009012\|Ga0066710_101862677	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300009038\|Ga0099829_11054046	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300009101\|Ga0105247_10497305	Not Available	888	Open in IMG/M
3300009177\|Ga0105248_10723954	All Organisms → cellular organisms → Bacteria → Acidobacteria	1123	Open in IMG/M
3300009521\|Ga0116222_1165958	Not Available	951	Open in IMG/M
3300009523\|Ga0116221_1310387	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300009525\|Ga0116220_10253748	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	768	Open in IMG/M
3300009700\|Ga0116217_10584038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300010048\|Ga0126373_12621724	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300010361\|Ga0126378_12826156	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300010376\|Ga0126381_102066944	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300010376\|Ga0126381_102554170	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300010397\|Ga0134124_10224478	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300011269\|Ga0137392_10412261	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300012200\|Ga0137382_11255421	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300012202\|Ga0137363_11087747	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300012917\|Ga0137395_10473488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300012918\|Ga0137396_10242582	All Organisms → cellular organisms → Bacteria → Acidobacteria	1328	Open in IMG/M
3300012930\|Ga0137407_11519389	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300013105\|Ga0157369_10279485	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300013306\|Ga0163162_10408667	Not Available	1490	Open in IMG/M
3300014495\|Ga0182015_10943321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300014501\|Ga0182024_10701221	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300014654\|Ga0181525_10075815	Not Available	1877	Open in IMG/M
3300016445\|Ga0182038_11157875	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300017924\|Ga0187820_1327853	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300017928\|Ga0187806_1045161	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300017937\|Ga0187809_10085653	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300017972\|Ga0187781_10177260	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300018021\|Ga0187882_1388626	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300018023\|Ga0187889_10423006	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300018062\|Ga0187784_10772069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	767	Open in IMG/M
3300018085\|Ga0187772_10437374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	915	Open in IMG/M
3300020580\|Ga0210403_10002695	All Organisms → cellular organisms → Bacteria	15873	Open in IMG/M
3300020580\|Ga0210403_10762846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300020580\|Ga0210403_11031174	Not Available	642	Open in IMG/M
3300020581\|Ga0210399_10450375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1072	Open in IMG/M
3300020582\|Ga0210395_10388621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300020582\|Ga0210395_11328426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300021168\|Ga0210406_11014779	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300021402\|Ga0210385_10296158	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1198	Open in IMG/M
3300021406\|Ga0210386_10179150	All Organisms → cellular organisms → Bacteria	1786	Open in IMG/M
3300021407\|Ga0210383_11629404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis	530	Open in IMG/M
3300021420\|Ga0210394_10715685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	877	Open in IMG/M
3300021432\|Ga0210384_10428685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1191	Open in IMG/M
3300021433\|Ga0210391_10707166	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300021559\|Ga0210409_10583443	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300021559\|Ga0210409_11269229	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300021560\|Ga0126371_13828083	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300022528\|Ga0242669_1101263	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300022557\|Ga0212123_10213509	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300022724\|Ga0242665_10146231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300022733\|Ga0224562_1017490	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300025320\|Ga0209171_10104576	All Organisms → cellular organisms → Bacteria → Acidobacteria	1726	Open in IMG/M
3300025321\|Ga0207656_10277141	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300025612\|Ga0208691_1048150	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300025898\|Ga0207692_11061470	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300025922\|Ga0207646_10538829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300026552\|Ga0209577_10439535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M
3300027559\|Ga0209222_1043000	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300027605\|Ga0209329_1111985	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	599	Open in IMG/M
3300027643\|Ga0209076_1088386	All Organisms → cellular organisms → Bacteria → Acidobacteria	881	Open in IMG/M
3300027667\|Ga0209009_1123310	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300027729\|Ga0209248_10045111	All Organisms → cellular organisms → Bacteria → Acidobacteria	1358	Open in IMG/M
3300027825\|Ga0209039_10111460	Not Available	1165	Open in IMG/M
3300027842\|Ga0209580_10262352	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	860	Open in IMG/M
3300027889\|Ga0209380_10494052	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300027895\|Ga0209624_10126167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1683	Open in IMG/M
3300027895\|Ga0209624_10771607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300027986\|Ga0209168_10655028	Not Available	500	Open in IMG/M
3300028020\|Ga0265351_1007103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	902	Open in IMG/M
3300028379\|Ga0268266_10006448	All Organisms → cellular organisms → Bacteria → Acidobacteria	10745	Open in IMG/M
3300028379\|Ga0268266_10086823	All Organisms → cellular organisms → Bacteria	2735	Open in IMG/M
3300028381\|Ga0268264_10602325	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300028536\|Ga0137415_10153045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2142	Open in IMG/M
3300028745\|Ga0302267_10269340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300029636\|Ga0222749_10570422	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300029882\|Ga0311368_10034642	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4752	Open in IMG/M
3300029956\|Ga0302150_10271346	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300030509\|Ga0302183_10401098	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300030815\|Ga0265746_1014596	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300030991\|Ga0073994_12358989	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300031049\|Ga0074036_10779255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1096	Open in IMG/M
3300031128\|Ga0170823_14940047	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300031231\|Ga0170824_127868696	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300031233\|Ga0302307_10208630	All Organisms → cellular organisms → Bacteria → Acidobacteria	1007	Open in IMG/M
3300031236\|Ga0302324_100274392	All Organisms → cellular organisms → Bacteria	2608	Open in IMG/M
3300031708\|Ga0310686_110451997	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300031711\|Ga0265314_10366863	Not Available	788	Open in IMG/M
3300031716\|Ga0310813_10550157	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300031718\|Ga0307474_10164967	Not Available	1676	Open in IMG/M
3300031718\|Ga0307474_10426797	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300031718\|Ga0307474_10679466	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300031740\|Ga0307468_101704796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300031754\|Ga0307475_10412568	All Organisms → cellular organisms → Bacteria	1085	Open in IMG/M
3300031962\|Ga0307479_10076867	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3231	Open in IMG/M
3300031962\|Ga0307479_10110624	Not Available	2672	Open in IMG/M
3300032001\|Ga0306922_10478045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1329	Open in IMG/M
3300032180\|Ga0307471_104185836	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300032515\|Ga0348332_11645103	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300032828\|Ga0335080_11412565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.47%
Host-Associated	Host-Associated	8.53%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.40%
Aquatic	Environmental → Aquatic	10.08%
Plants	Host-Associated → Plants	8.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.97%
Freshwater	Environmental → Aquatic → Freshwater	7.75%
Peat	Environmental → Terrestrial → Peat	4.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.10%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.55%
Sediment	Environmental → Aquatic → Sediment	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.59%
Loam	Environmental → Terrestrial → Soil → Loam	14.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.33%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.30%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.75%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.10%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.33%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.55%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.28%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.20%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.20%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.65%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.10%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.33%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.55%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.55%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.78%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.78%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300001100	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022733	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028020	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE4	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029956	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031049	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Mineral C2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_09563650	2170459003	Grass Soil	GGGARAIPVGFIEVSDQQARFVPITDRKKLAGAAAIGIGLGMWLGWRRRR
JGI12703J13194_1085481	3300001100	Forest Soil	VRTIPVGVIEVSDQPTRFVPITDRKKLTGAVLASIGLGMLLGWRRRR*
JGIcombinedJ26739_1006272891	3300002245	Forest Soil	GVIEVSDQQTRFIPITSRKKMAGAVFVGSLLGIFLGWRKRR*
JGIcombinedJ26739_1010073131	3300002245	Forest Soil	IEVSDQQTRFIPITNRKKMAGVALAGTLLGIVLSWRKRR*
JGIcombinedJ51221_102561231	3300003505	Forest Soil	VRAIPVGVIEISEQRTCFVPITDRKKLTGAVVTGIGLGILLGWRSRRR*
Ga0062389_1000911953	3300004092	Bog Forest Soil	TIPVGVIEISDQPTRFIPITSRKKLAAAIVGGILFGLLFARRRRR*
Ga0066395_101790772	3300004633	Tropical Forest Soil	IRAVPVGVIEVSSNQPTRFVPITDRKKLGAAAMAGIVVGMWLGWRRRR*
Ga0066673_105882981	3300005175	Soil	GVVRAVPVGVFEVGSHGTRFVSITERRKLASVLATGVALGMWLGWRRRH*
Ga0066671_102338543	3300005184	Soil	IEVSSQPTRFVPISDRKKLTAAVFLGLGLGMLLGFRRRR*
Ga0068869_1002095593	3300005334	Miscanthus Rhizosphere	AVPVGVIEVSIHQTRFVPITDRRKLTGALLAGIGLGMWLGWRRRR*
Ga0070707_1012220522	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VPVGVIEVSEQHTCFVPITDRKKLTGALLAGIAFGMWLGWRRLR*
Ga0070699_1010781792	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	HAVPVGVVEVSDQQTRFVPISDRKKLTGMLLLGVGMGMWLNRRRRS*
Ga0070735_104876761	3300005534	Surface Soil	RTCFVPITDRKKLTGAVVTGIGLGILLGWRSRRR*
Ga0070735_108007242	3300005534	Surface Soil	VGVVEVSAQNTRFVPISDRKKLAGAVALGALLGVP*
Ga0070733_104448411	3300005541	Surface Soil	VIEISDQQTCFVPITDRKKLTGALLAGIGFGMWLGWRNRR*
Ga0070732_107200172	3300005542	Surface Soil	AIPVGVIEVSDQQTRFVPITDHKKLAGAVLAGIGLGMWLGWRRRR*
Ga0066692_109681341	3300005555	Soil	VGVIEISDQQTRFVQITDRKKLTGAILAGIGLGMWLG*
Ga0066707_107212222	3300005556	Soil	VGVIEVSDQQTRFVPISDRKKLTGVLLLGVGLGMWLGYRR*
Ga0066700_107065092	3300005559	Soil	VGVIEISDQQTRFVPITDRKKLTGAVLVGIGLGMFLGWRRRH*
Ga0066702_100534654	3300005575	Soil	QQTRFVPITDRKKLTGAVLVGIGLGMFLGWRRRH*
Ga0066691_100785123	3300005586	Soil	VRAIPVGVIEISDQQTRFVPITDRKKLTGAVLAGIGFGMWLGWRRRGRGV*
Ga0070717_100286148	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GGGARAIPVGVIEVSEQPTRFVPITDRKKLTGAVLVGIGLGLWLGWRRRKFNS*
Ga0075015_1000820361	3300006102	Watersheds	VRAVPVGVIEISDHPTRFVPVTDRKKLAGAVLVGIGLGVWLGWRRWR*
Ga0070712_1007119651	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	EVSNQQTRFVPISDKRKLVGAVLAGISFGIWWGWRRHR*
Ga0070765_1006865971	3300006176	Soil	RAIPVGVIEISDQQTSFVPITDRKKLTGAVLAGIGLGVLLGWRTRR*
Ga0068871_1019135821	3300006358	Miscanthus Rhizosphere	PVGVIEISDQQTRFVPITDRKKLTGAVVVGIGLGLWLGWRRRH*
Ga0066660_102141023	3300006800	Soil	RAVPVGVIEVSDQPTRFVPISDRKKLTGAVLVGLALGMLMSLRRR*
Ga0066710_1018626772	3300009012	Grasslands Soil	VIEISDQQTRFVPITDRKKLTGAVLAGIGLGVWLGWRRWR
Ga0099829_110540461	3300009038	Vadose Zone Soil	VIEVSDQQTRFVPISDRKKLTGVLLLGVGLGMWLGHRR*
Ga0105247_104973051	3300009101	Switchgrass Rhizosphere	EVSNQQTRFIPITDRRKLAGALLAGIGFGMWLGWRRRR*
Ga0105248_107239542	3300009177	Switchgrass Rhizosphere	GAVRAVPVGVIEVSIHQTRFVPITDRRKLTGALLAGIGLGMWLGWRRRR*
Ga0116222_11659581	3300009521	Peatlands Soil	GVVEISDQQTCFVPITSRKKLAVAVLAGIVLGIWVGWRRRG*
Ga0116221_13103873	3300009523	Peatlands Soil	GARTVPVGVIEISDQPTCFVPITDRKKLTEALLAGIGFGMWLGWRNRR*
Ga0116220_102537482	3300009525	Peatlands Soil	VRAVPVGVIEISDQQTCFVPITDRKKLTGAVLAGIGLGVLLGWRARR*
Ga0116217_105840381	3300009700	Peatlands Soil	EGGGGAGGVRAVPVGVIEISDQPTRFVPISNHKKLTGAVLAGIGFGMLLGWRRR*
Ga0126373_126217241	3300010048	Tropical Forest Soil	GVIEISDHQTRFVPITDRRKLSAAILIGAGFGMWLARSRRH*
Ga0126378_128261561	3300010361	Tropical Forest Soil	GVQAVPIGVIEVSKQQTRFVPITDRKKLGGAVLAGMVLGMFWRWQRRH*
Ga0126381_1020669442	3300010376	Tropical Forest Soil	VEVSEQQTRFVPISDRKKLTAAAFGGIVLGMWLGWRRRR*
Ga0126381_1025541701	3300010376	Tropical Forest Soil	SKQQTRFVPISDRKKLSAAVLTGMVIGMFWRWRRRH*
Ga0134124_102244783	3300010397	Terrestrial Soil	GGGVRAIPVGVIEVSHQSTRFIPITDRKKLTGAVLAGIGVGIWLAWTRRR*
Ga0137392_104122611	3300011269	Vadose Zone Soil	VIEISDQQFRFVPITDSKKLTGAVLAGIGFGMWLGWRRRR*
Ga0137382_112554211	3300012200	Vadose Zone Soil	QQTRFVPITDRKRLAGAVLAGIGLGMWLGWRRRR*
Ga0137363_110877471	3300012202	Vadose Zone Soil	QQTRFVPITDRKKMTGALLAGIGFGMWLGWRRHR*
Ga0137395_104734883	3300012917	Vadose Zone Soil	RAVPVGIIEISDQQTRFVPITDRKKLAAATLVGIGLGMWLGWCRRR*
Ga0137396_102425821	3300012918	Vadose Zone Soil	RAIPVGVIEISDQQTRFVPITDRKKLTGAVLAGIGFGMWLGWRRRR*
Ga0137407_115193892	3300012930	Vadose Zone Soil	GVRAIPVGVIEISDQQTRFVPITDRKKLTGAVLAGIGLGMWLGWRRRR*
Ga0157369_102794854	3300013105	Corn Rhizosphere	PVGVIEVSHQQTRFVPITDRKKLTGTLLAGIGLGMWLAWSRRR*
Ga0163162_104086672	3300013306	Switchgrass Rhizosphere	VIEVSNQQTRFIPITDRRKLAGALLAGIGFGMWLGWRRRR*
Ga0182015_109433212	3300014495	Palsa	RAVPVGVIEISEQRTCFVPVTDRKKLAGAVVAGIGLGILLSWRSRRR*
Ga0182024_107012211	3300014501	Permafrost	EVSDQQTRFVPITDRKRFAGAVLAGIGLGMLLGWRRRR*
Ga0181525_100758152	3300014654	Bog	GGARVVPLGVIEISEQQTTFVPITSRKKLTGVLLGGIGLGMLLGWRRLRSR*
Ga0182038_111578751	3300016445	Soil	SAQQTRFVPISDQKKLGSVLLAGIGLGLLMAWRRKR
Ga0187820_13278531	3300017924	Freshwater Sediment	PVGVVEVSDQQTRFVPINDRKKVAGAIAMGVGLGIFLAWRRRR
Ga0187806_10451614	3300017928	Freshwater Sediment	GGGVRTVPVGVIEISDQPTCFVPITDRKKLTGALLAGIGFGMWLGWRNRR
Ga0187809_100856531	3300017937	Freshwater Sediment	GGGARTVPVGVIEISDQPTCFVPITDRKKLTGALLAGIGFGMWLGWRNRR
Ga0187781_101772602	3300017972	Tropical Peatland	EISGQATRFVPISDRKKLTGAVVAGIGLGLWLGWRRRR
Ga0187882_13886261	3300018021	Peatland	RAIPVGVIEISDQQETRFVPITDRKKLTGAILAGIGLGMWLGWRRRR
Ga0187889_104230063	3300018023	Peatland	IDISDQQETRCVPITDRKKLTGAILAGIGLGMWLGWRRRR
Ga0187784_107720692	3300018062	Tropical Peatland	GGGGARAIPVGVIEISDQQTRFVPITDRKKLTAATVAGIGLGIWLSWRRRH
Ga0187772_104373742	3300018085	Tropical Peatland	IPVGVIEISDQQTRFVPITDRKKLTAATVAGIGLGIWLSWRRRH
Ga0210403_1000269517	3300020580	Soil	VGVIEVSDQQTRFVPITDRKKLTGAVLTGIGLGMFLGWRRRR
Ga0210403_107628461	3300020580	Soil	RAVAVGVIEVSDRQTRFVPITDRKRLAGAVLVGIGLGMLLGWRRRR
Ga0210403_110311741	3300020580	Soil	EISEHQTRFIPITSRKKLTGAVIAGILLGISFGWRRRRR
Ga0210399_104503752	3300020581	Soil	VGVIEISDQPTCFVPITDRKKLTGAAVAGIGLGILLGWRSRRR
Ga0210395_103886211	3300020582	Soil	VGVIEISDLRTCFVPITDRKKLTGAVLAGVGLGILLGWSARR
Ga0210395_108886241	3300020582	Soil	SARSEGRGGVGGVRAIPVGVIEVSDQQIHFVPITDRKRLAGAVLAGIGLGMLLGWRRRH
Ga0210395_113284262	3300020582	Soil	GGGGAVRAVPIGVIEISDQPARFVPISNHKKLTAAVLAGIGFGMLMGWRRRR
Ga0210406_110147791	3300021168	Soil	QTRFVPITDRKKLTGAVLAGIVLGMWVGWRRVRRH
Ga0210385_102961582	3300021402	Soil	IPVGVIEISDQHTCFIPITSRKKLAGAIVVGALLGIFLGWRRRRR
Ga0210386_101791501	3300021406	Soil	IPVGVIEVTDQHTRFIPITSSKKLAGFVLAGALLGMIFGRRKRR
Ga0210383_116294041	3300021407	Soil	EGGGGGCGVRAVPVGVIDVSDQGTVFVPITSRHKLAGAVVAGVGLGIFLSWRRRKK
Ga0210394_107156851	3300021420	Soil	PVGVIEISEQRTCFVPITDRKKLTGAVVAGIGLGILLGWRSRRR
Ga0210384_104286852	3300021432	Soil	VSTGQTRFVPITSRKKLVAASFGGIVVGALIGWLGRRR
Ga0210391_107071662	3300021433	Soil	ISDQQTSFVPITDRKKLTGAVLAGIGLGVLLGRRRRR
Ga0210409_105834431	3300021559	Soil	GGVRAIPVGVIEISDQQTRFVPITDRTKLTGAVLAGIGLGMWLGWRRRG
Ga0210409_112692291	3300021559	Soil	PVGVIEISEQRTCFVPITDRKKLTGAVVTGIGLGILLGWRSRRR
Ga0126371_138280832	3300021560	Tropical Forest Soil	AIPVGVIEISDLQTRFVPITDRKKLTAAAVAGIGLGIWLSWRRRH
Ga0242669_11012632	3300022528	Soil	GGGGAGVRAIPVGVIEISDQHTCFIPITSRKKLAGAIVVGALLGIFLSWRRRRR
Ga0212123_102135094	3300022557	Iron-Sulfur Acid Spring	ARAIPVGVIEISDLRTCFVPITDRKKLTGAVLAGVGLGILLVWSARR
Ga0242665_101462312	3300022724	Soil	GGAVRAVPIGVIEISDQPARFVPISNHKKLTAAVLAGIGFGMLMGWRKRR
Ga0224562_10174901	3300022733	Soil	GVRAIPVGVIEISDHPTSFVPITDRKKLTGAVLAGIGLGILLGWRTRR
Ga0209171_101045765	3300025320	Iron-Sulfur Acid Spring	PIGVIEVSDQQTRFVPITDRKRLAGAVLAGIGLGMLLGWRRRR
Ga0207656_102771411	3300025321	Corn Rhizosphere	AVPVGVIEVSNQQTRFVPITDRKKLTGALLAGIGFGMWLAWSRRR
Ga0208691_10481501	3300025612	Peatland	VRAIPVGVIEISDQQTRFIPITSRKKLTGAVVAGILLGISLGWRRRRR
Ga0207692_110614702	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	GGARAIPVGVIEVSEQPTRFVPITDRKKLTGAVLVGIGLGLWLGWRRRKFNS
Ga0207646_105388294	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	ATPVGVIEISDQQTRFVPITDRKRLAGAVLAGIGLGIFLGWRRRR
Ga0209577_104395352	3300026552	Soil	RAIPVGVIEISDQQTRFVPITDRKKLAGAILAGIGFGMWLGWRGGRR
Ga0209222_10430002	3300027559	Forest Soil	PVGVIEVSDQQTRFIPITSRKKMAGAVFVGSLLGIFLGWRKRR
Ga0209329_11119852	3300027605	Forest Soil	VQNLIAQQTRFVPITDRKKLTGAVLAGIGIGMWLGWRRRR
Ga0209076_10883861	3300027643	Vadose Zone Soil	GGGVRAIPVGVIEISDQQTRFVPITDRKKLTGAVLVGIGLGVWLGWRRRR
Ga0209009_11233101	3300027667	Forest Soil	GVIEVSDQQTRFVPITDRKRLAGAVLAGIGLGILLGWRRRH
Ga0209248_100451114	3300027729	Bog Forest Soil	GCGGAGVRAIPVGVIEISDQQTRFIPITSRKKLAGAILGGILLGITLGWRRRRR
Ga0209039_101114601	3300027825	Bog Forest Soil	PLGVIEVSAEQTRFVPITSRRKLAGALVAGVGFGILLAWRRLRSR
Ga0209580_102623522	3300027842	Surface Soil	VIEISDHQTRFVPIATDRRKLAGAIATGIGMGLWLARLRR
Ga0209380_104940522	3300027889	Soil	LAIPAGVMEISDQQTRFVPITDRKKLAGAVLAGISFGMWLGWRRRR
Ga0209624_101261672	3300027895	Forest Soil	VGVIEIGDQQTRFVPITDRKKLTGAVLVGTGFGMRLGWRKRR
Ga0209624_107716072	3300027895	Forest Soil	EISDRRTCFVPITDRKKLTGAVLAGVGLGILLGWSARR
Ga0209168_106550282	3300027986	Surface Soil	VGVVEVSAQNTRFVPISDRKKLAGAVALGALLGVP
Ga0265351_10071032	3300028020	Soil	EVSDQHTRFVPITDRKRLVGAVLAGIGLGMWLGWRRRR
Ga0268266_1000644815	3300028379	Switchgrass Rhizosphere	RAVPVGVIEVSNQQTRFVPITDRKKLTGALLAGIGFGMWLAWSRRR
Ga0268266_100868236	3300028379	Switchgrass Rhizosphere	GVIEVSHQQTRFVPITDRKKLTGTLLAGIGLGMWLAWSRRR
Ga0268264_106023251	3300028381	Switchgrass Rhizosphere	GVRAVPVGVIEVSNQPTRFVPITDRRKLTGAVLAGIGFGMWLGWRRRR
Ga0137415_101530451	3300028536	Vadose Zone Soil	SDQQTRFVPITDRKTLTGAVLAGIGLGMWLGWRRRR
Ga0302267_102693402	3300028745	Bog	VRAIPVGVIEVSDQQTRFVPITDRKRFAGAVLAGIGLGMLLGWRRRR
Ga0222749_105704221	3300029636	Soil	VRAVPVGVIEVSEQQTRFVPITDRKKLTGAVLAGIGFGMWVGWRRLRRHESVAQ
Ga0311368_100346421	3300029882	Palsa	GAAVRTIPVGVIEVSDQQTRFIPITSRKKLAAAALVGTLLGISLGWRKRR
Ga0302150_102713462	3300029956	Bog	VIELSDQQTRFVPITDRKRFAGAVLAGIGLGMLLGWRRRR
Ga0302183_104010981	3300030509	Palsa	PVGVIEVSDQQTRFIPITSRKKLAGAVFVGSLLGIFLGWRKRR
Ga0265746_10145962	3300030815	Soil	GVIDITEKETRFVPITDRKRLGGAVLVGVGLGMLLSWRRRR
Ga0073994_123589891	3300030991	Soil	IEISDQQTRFVPITDRKKLTGVLLAGIGFGMWLGWNRRR
Ga0074036_107792551	3300031049	Soil	AWAIPMGVIEVSDQQTRFVPITDRKRLAGAVLAGIGLGMLLGWRRRR
Ga0170823_149400473	3300031128	Forest Soil	VSDQQTRFVPITDRKRLAGAVLVGIGLGMLLDWRRRR
Ga0170824_1278686961	3300031231	Forest Soil	GVIEVSDQQTRFVPITDRKRLAGAVLAGIGLGILLGWRRRR
Ga0302307_102086301	3300031233	Palsa	GVIEISGQQTRFIPITSRKKLTGAVIAGILLGISLGWRRRRR
Ga0302324_1002743924	3300031236	Palsa	LRAIPVGVIEISGQQTRFIPITSRKKLTGAVIAGILLGISLGWRRRRR
Ga0310686_1104519971	3300031708	Soil	GVRAIPVGVIEVSDQQTRFIPITSRKKMAGALFAGSLLGIFLGWRRRR
Ga0265314_103668631	3300031711	Rhizosphere	TVPVGVIEISGQRTCFVPITDRKKLAGAILAGIGLGLWLGWRRRL
Ga0310813_105501573	3300031716	Soil	GVRAVPVGVIEVSNQQTRFVPITDRKKLTGALLAGIGFGMWLAWSRRR
Ga0307474_101649671	3300031718	Hardwood Forest Soil	GVIEVSQEQTRFIPITSRRKLAGAVFAGIVLGLTLSLRRRRH
Ga0307474_104267972	3300031718	Hardwood Forest Soil	EGGSGGGGVLAIPAGVMEISDQQTRFVPITDRKKLAGAVLAGIGFGMWLGWRRRR
Ga0307474_106794662	3300031718	Hardwood Forest Soil	RAVPVGVIEVSHQQTRFVPITDRKKLSGAVLAGIGLGMWLGWRRRR
Ga0307468_1017047961	3300031740	Hardwood Forest Soil	GGGVRAVPVGVIEVSDQQTRFVPITDRKKLTGAVLAGIGIGMWLSWHRRR
Ga0307475_104125681	3300031754	Hardwood Forest Soil	VGVIEVSEQQTRFVPISDRKKLTGAVLAGIVFGMWMGWRGLRRH
Ga0307479_100768677	3300031962	Hardwood Forest Soil	GVRAIPVGVIEVSDQQTRFVPITDRKKLTGAVLAGIGLGMFLGWRRRR
Ga0307479_101106242	3300031962	Hardwood Forest Soil	MARAVPVGVVEVSKAANRFVPITDRKKLAGTLRTGIGLGILFGRRRRH
Ga0306922_104780451	3300032001	Soil	GAGGVRAIPVGVIEVSNQQTRFVPITDRKKLTGAVLTGVGLGIWLGWRRRR
Ga0307471_1041858361	3300032180	Hardwood Forest Soil	VSNQQTRFVPISDKRKLVGAVLAGISFGIWWGWRRHR
Ga0348332_116451032	3300032515	Plant Litter	AGVRAIPVGVIEVSDQQTRFIPITSRKKMAGAVFVGSLLGIFLGWRKRR
Ga0335080_114125652	3300032828	Soil	GVRAVPVGVIEISNQPTRFVSINDKKKLTGAVIAGIGLGMWLGWRRRR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063916

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign