Metagenome / Metatranscriptome Family F063909

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063909
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	64 residues
Representative Sequence	MTKKQVGSKLKAQSALGPIAHALIQDYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK
Number of Associated Samples	108
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.87 %
% of genes near scaffold ends (potentially truncated)	37.98 %
% of genes from short scaffolds (< 2000 bps)	95.35 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.240 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.930 % of family members)
Environment Ontology (ENVO)	Unclassified (44.961 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (65.116 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 75.76% β-sheet: 0.00% Coil/Unstructured: 24.24%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00011	HSP20	53.49
PF06823	DUF1236	2.33
PF08239	SH3_3	2.33
PF13493	DUF4118	2.33
PF09929	DUF2161	1.55
PF10815	ComZ	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	53.49

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.24 %
Unclassified	root	N/A	38.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.24 %
Unclassified	root	N/A	38.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.24 %
Unclassified	root	N/A	38.76 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.53 %
Unclassified	root	N/A	38.76 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	18.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.76 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37.98 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.60 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.76 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	37.21 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.60 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.60 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	17.83 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	10.08 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.60 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	17.83 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	10.08 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.60 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	10.08 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.33 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.76 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.60 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	10.08 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2.33 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908016\|OU_2_1_1_newblercontig177353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300000956\|JGI10216J12902_108533237	Not Available	808	Open in IMG/M
3300001431\|F14TB_100190941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1833	Open in IMG/M
3300005328\|Ga0070676_10872091	Not Available	669	Open in IMG/M
3300005334\|Ga0068869_101479125	Not Available	603	Open in IMG/M
3300005336\|Ga0070680_100576080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	965	Open in IMG/M
3300005340\|Ga0070689_100334412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1267	Open in IMG/M
3300005341\|Ga0070691_10957362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300005341\|Ga0070691_11060909	Not Available	509	Open in IMG/M
3300005345\|Ga0070692_10275428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300005353\|Ga0070669_102031479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300005354\|Ga0070675_100543092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1050	Open in IMG/M
3300005355\|Ga0070671_100250758	Not Available	1504	Open in IMG/M
3300005367\|Ga0070667_101535816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300005434\|Ga0070709_10507776	Not Available	917	Open in IMG/M
3300005436\|Ga0070713_100950418	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300005436\|Ga0070713_101362335	Not Available	688	Open in IMG/M
3300005437\|Ga0070710_11172472	Not Available	567	Open in IMG/M
3300005438\|Ga0070701_10376180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	894	Open in IMG/M
3300005445\|Ga0070708_100643595	Not Available	999	Open in IMG/M
3300005456\|Ga0070678_101242930	Not Available	692	Open in IMG/M
3300005456\|Ga0070678_101388168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	655	Open in IMG/M
3300005457\|Ga0070662_100683246	Not Available	867	Open in IMG/M
3300005458\|Ga0070681_11518146	Not Available	595	Open in IMG/M
3300005459\|Ga0068867_100449390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1098	Open in IMG/M
3300005466\|Ga0070685_10124951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1602	Open in IMG/M
3300005467\|Ga0070706_101117722	Not Available	725	Open in IMG/M
3300005564\|Ga0070664_100292200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1471	Open in IMG/M
3300005614\|Ga0068856_101054399	Not Available	831	Open in IMG/M
3300005616\|Ga0068852_102006835	Not Available	601	Open in IMG/M
3300005840\|Ga0068870_10340041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	960	Open in IMG/M
3300006058\|Ga0075432_10169346	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300006175\|Ga0070712_100978781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	731	Open in IMG/M
3300006755\|Ga0079222_10282886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1069	Open in IMG/M
3300006755\|Ga0079222_10782946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	775	Open in IMG/M
3300006755\|Ga0079222_12152001	Not Available	553	Open in IMG/M
3300006845\|Ga0075421_100933441	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300006846\|Ga0075430_100842012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	756	Open in IMG/M
3300006852\|Ga0075433_10242863	Not Available	1599	Open in IMG/M
3300006854\|Ga0075425_100273429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1944	Open in IMG/M
3300006854\|Ga0075425_100379780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	1627	Open in IMG/M
3300006871\|Ga0075434_100549287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	1175	Open in IMG/M
3300006871\|Ga0075434_101716212	Not Available	635	Open in IMG/M
3300006904\|Ga0075424_100337615	Not Available	1605	Open in IMG/M
3300007076\|Ga0075435_100915810	Not Available	765	Open in IMG/M
3300009011\|Ga0105251_10522688	Not Available	556	Open in IMG/M
3300009092\|Ga0105250_10244667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300009094\|Ga0111539_12881098	Not Available	557	Open in IMG/M
3300009094\|Ga0111539_12961878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	549	Open in IMG/M
3300009101\|Ga0105247_10247999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1216	Open in IMG/M
3300009147\|Ga0114129_10900264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1121	Open in IMG/M
3300009148\|Ga0105243_10519655	Not Available	1132	Open in IMG/M
3300009156\|Ga0111538_10309135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2000	Open in IMG/M
3300009156\|Ga0111538_10383624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	1779	Open in IMG/M
3300009156\|Ga0111538_11538272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	839	Open in IMG/M
3300009156\|Ga0111538_13557302	Not Available	540	Open in IMG/M
3300009553\|Ga0105249_11854387	Not Available	676	Open in IMG/M
3300010373\|Ga0134128_11480266	Not Available	747	Open in IMG/M
3300010375\|Ga0105239_12812696	Not Available	568	Open in IMG/M
3300010396\|Ga0134126_11256305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	821	Open in IMG/M
3300010396\|Ga0134126_12674631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	542	Open in IMG/M
3300010399\|Ga0134127_10243890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1698	Open in IMG/M
3300010399\|Ga0134127_13113985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	541	Open in IMG/M
3300010400\|Ga0134122_10223804	Not Available	1574	Open in IMG/M
3300010400\|Ga0134122_10682950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	962	Open in IMG/M
3300010403\|Ga0134123_10844253	Not Available	915	Open in IMG/M
3300011119\|Ga0105246_10108509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2035	Open in IMG/M
3300012882\|Ga0157304_1026214	Not Available	775	Open in IMG/M
3300012883\|Ga0157281_1063725	Not Available	597	Open in IMG/M
3300012884\|Ga0157300_1094911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300012891\|Ga0157305_10293987	Not Available	506	Open in IMG/M
3300012892\|Ga0157294_10011486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1557	Open in IMG/M
3300012893\|Ga0157284_10303889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	524	Open in IMG/M
3300012897\|Ga0157285_10259939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300012898\|Ga0157293_10160498	Not Available	644	Open in IMG/M
3300012900\|Ga0157292_10070128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	986	Open in IMG/M
3300012901\|Ga0157288_10087556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	818	Open in IMG/M
3300012903\|Ga0157289_10030948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1249	Open in IMG/M
3300012906\|Ga0157295_10033732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1124	Open in IMG/M
3300012907\|Ga0157283_10263897	Not Available	579	Open in IMG/M
3300012908\|Ga0157286_10179355	Not Available	698	Open in IMG/M
3300012915\|Ga0157302_10099582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	915	Open in IMG/M
3300012915\|Ga0157302_10208550	Not Available	706	Open in IMG/M
3300012915\|Ga0157302_10471332	Not Available	535	Open in IMG/M
3300012916\|Ga0157310_10082333	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300013102\|Ga0157371_11003880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300013306\|Ga0163162_11887789	Not Available	684	Open in IMG/M
3300013308\|Ga0157375_11675761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300014325\|Ga0163163_11873550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	660	Open in IMG/M
3300014326\|Ga0157380_10289326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1504	Open in IMG/M
3300014326\|Ga0157380_10619767	Not Available	1074	Open in IMG/M
3300014326\|Ga0157380_12680185	Not Available	565	Open in IMG/M
3300014969\|Ga0157376_10256696	Not Available	1635	Open in IMG/M
3300015200\|Ga0173480_10124481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1285	Open in IMG/M
3300015200\|Ga0173480_11117471	Not Available	527	Open in IMG/M
3300015201\|Ga0173478_10406663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	654	Open in IMG/M
3300015374\|Ga0132255_103549652	Not Available	663	Open in IMG/M
3300018469\|Ga0190270_10084623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2367	Open in IMG/M
3300018481\|Ga0190271_10044836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3713	Open in IMG/M
3300019356\|Ga0173481_10210836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	849	Open in IMG/M
3300019356\|Ga0173481_10268071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	778	Open in IMG/M
3300019361\|Ga0173482_10399964	Not Available	638	Open in IMG/M
3300019362\|Ga0173479_10075203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1184	Open in IMG/M
3300020069\|Ga0197907_10442739	Not Available	527	Open in IMG/M
3300020070\|Ga0206356_10784367	Not Available	633	Open in IMG/M
3300020078\|Ga0206352_10140406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1087	Open in IMG/M
3300022880\|Ga0247792_1030046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	947	Open in IMG/M
3300022883\|Ga0247786_1090610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300025735\|Ga0207713_1109715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	940	Open in IMG/M
3300025908\|Ga0207643_10108807	All Organisms → cellular organisms → Bacteria → Proteobacteria	1631	Open in IMG/M
3300025911\|Ga0207654_11107100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300025911\|Ga0207654_11250013	Not Available	541	Open in IMG/M
3300025915\|Ga0207693_10398105	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1077	Open in IMG/M
3300025916\|Ga0207663_10814462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300025925\|Ga0207650_10556182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	962	Open in IMG/M
3300025931\|Ga0207644_10161625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1741	Open in IMG/M
3300025933\|Ga0207706_10073303	Not Available	3011	Open in IMG/M
3300025944\|Ga0207661_11500691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300025961\|Ga0207712_10323119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1274	Open in IMG/M
3300026041\|Ga0207639_12301036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300026088\|Ga0207641_12185248	Not Available	554	Open in IMG/M
3300026089\|Ga0207648_10178686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1878	Open in IMG/M
3300026121\|Ga0207683_10046652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3793	Open in IMG/M
3300027907\|Ga0207428_10872917	Not Available	636	Open in IMG/M
3300028381\|Ga0268264_10193556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1855	Open in IMG/M
3300031562\|Ga0310886_10187562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	1119	Open in IMG/M
3300031944\|Ga0310884_10249020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	971	Open in IMG/M
3300032013\|Ga0310906_10241017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1123	Open in IMG/M
3300032211\|Ga0310896_10050983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1672	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.71%
Host-Associated	Host-Associated	47.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.94%
Plants	Host-Associated → Plants	47.29%
Unclassified	Environmental → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	34.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.63%
Unclassified	Environmental → Unclassified → Unclassified	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	27.13%
Loam	Environmental → Terrestrial → Soil → Loam	14.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.53%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.75%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.33%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	27.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.75%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.10%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.08%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	6.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.33%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.55%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908016	Sample 642	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300025735	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OU_01067940	2124908016		MNQKQVGSKLKAQSALGPVAHALIQGYLGPDQRVIDMERFFTALMQALHNAYALGWKDRGEIERAK
JGI10216J12902_1085332372	3300000956	Soil	MAKKQGGSKPKAQSALGPIAHALVQDYLGPDHKIIDMERFLTALMQALHDAYALGWKDRGAVEKRAK*
F14TB_1001909412	3300001431	Soil	MAKKQVGSKPRAMSALGPIAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIEQAK*
Ga0070676_108720913	3300005328	Miscanthus Rhizosphere	MTKKQVGSKLKAQSALGPVAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERA
Ga0068869_1014791251	3300005334	Miscanthus Rhizosphere	MTKKQVGSKLKAQSALGPVAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*LTAGPCR
Ga0070680_1005760803	3300005336	Corn Rhizosphere	KKQVGSKLKAQSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0070689_1003344121	3300005340	Switchgrass Rhizosphere	VGSKLKAQSALGPIAHALIQDYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0070691_109573621	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	QSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0070691_110609092	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKQGASKPKAQSALGPIAHALIQSYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0070692_102754282	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MTKKKVGSKLKAQSALGPVAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0070669_1020314791	3300005353	Switchgrass Rhizosphere	VGSKLKAQSALGPVAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0070675_1005430921	3300005354	Miscanthus Rhizosphere	MAKKQGGSKPKAQSALGPIAHALIQSYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0070671_1002507582	3300005355	Switchgrass Rhizosphere	MTKKQVGSKLKAQSALGPVAHALIQGYFGPDQRVIEMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0070667_1015358161	3300005367	Switchgrass Rhizosphere	VGSKLKAQSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0070709_105077762	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTKKKVGSKLKAQSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0070713_1009504182	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	PKLEARSALGPMAHALIQGYLGPDHKITDMERFLTAVMQALHDAYALGWKDRGEVEKRPK
Ga0070713_1013623352	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTKKQVGSKLKAQSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0070710_111724721	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTKKQVGSKLKAQSALGPAAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0070701_103761801	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MTKKQVGSKLKAQSALGPVAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0070708_1006435951	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTKKKVGSKLKAQSALGPIAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERA
Ga0070678_1012429301	3300005456	Miscanthus Rhizosphere	MTKKKVGSKLKAQSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGEIERTK*
Ga0070678_1013881682	3300005456	Miscanthus Rhizosphere	MDKKPGASKPKAQSALGPIAHALIQSYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0070662_1006832462	3300005457	Corn Rhizosphere	MTKKQVGSKLKAQSALGPVAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGDIERAK*
Ga0070681_115181462	3300005458	Corn Rhizosphere	MTKKKVGSKLKAQSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGDIERAK*
Ga0068867_1004493903	3300005459	Miscanthus Rhizosphere	VGSKLKAQSALGPIAHALIEGYLGPDKQTTNMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0070685_101249511	3300005466	Switchgrass Rhizosphere	TRESGMTKKQVGSKLKAQSALGPVAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0070706_1011177222	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTKKKVGSKLKAQSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGW
Ga0070664_1002922002	3300005564	Corn Rhizosphere	MTKKKVGSKLKAQSALGPIAHALIQGYLGPDQRVIDMERFFTALMQALHDAYGLGWKDRGEIERAK*
Ga0068856_1010543993	3300005614	Corn Rhizosphere	MAKKPGASKPKAQSALGPIAHALIQSYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGDIERAKLLTAGPCSQRLAQPISMRRGLK*
Ga0068852_1020068352	3300005616	Corn Rhizosphere	MTKKQVGSKLKAQSALGPVAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERPK*
Ga0068870_103400413	3300005840	Miscanthus Rhizosphere	SALGPIAHALIQSYLGPDQRIIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0075432_101693462	3300006058	Populus Rhizosphere	MTKKKVGSKLKAQSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGEIERA
Ga0070712_1009787811	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTKKQVGSKLKAQSALGPVAHALIQGYFGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0079222_102828862	3300006755	Agricultural Soil	MTKKKVGSKLKAQSALGPIAHALIQDYLGPSQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0079222_107829461	3300006755	Agricultural Soil	KAQSALGPVAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0079222_121520012	3300006755	Agricultural Soil	MAKKQGGSKPIAQSAMGPIAHALIQGYLGPDQRVTNMERFFTALLQALHDAYAL
Ga0075421_1009334412	3300006845	Populus Rhizosphere	MTKKKVGSKLKAQSALGPIAHALIQDYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0075430_1008420123	3300006846	Populus Rhizosphere	KLKAQSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0075433_102428633	3300006852	Populus Rhizosphere	MAKKQGGSKPKAQSAMGPIAHALIQGYLGPDQRVSNMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0075425_1002734295	3300006854	Populus Rhizosphere	MAKRQGGSKPKAQSALGPIAHALIEGYLGPDQKVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0075425_1003797803	3300006854	Populus Rhizosphere	MAKKQGGSKPKAQSAMGPIAHALIQSYLGPDQRVTNMEQFFTALMQALHDAYALGWKDRGEIERAK*
Ga0075434_1005492873	3300006871	Populus Rhizosphere	MAKKQGGSKPKAQSAMGPIAHALIQGYLGPDQRVTNMERFFTTLMQALHDAYVLGWKDRGEIERAK*
Ga0075434_1017162121	3300006871	Populus Rhizosphere	MTKKQVGSKLKAQSALGPIAHALIQDYLGPDQRVIDMERFFTALMQALHDAYALGW
Ga0075424_1003376153	3300006904	Populus Rhizosphere	MAKKQGGSKPKAQSAMGPIAHALIQGYLGPDQRVTNMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0075435_1009158101	3300007076	Populus Rhizosphere	MAKKQGGSKPKAQSAMGPIAHALIQGYLGPDQRVIDMERFFTALMQALHDAYGLGWKDRGEIERAK*
Ga0105251_105226882	3300009011	Switchgrass Rhizosphere	MTKKKVGSKLKAQSALGPIAHALIQDYLGPDRRVIDMERFFMALMQALHDAYALGWKDRGEIERAK*
Ga0105250_102446671	3300009092	Switchgrass Rhizosphere	SALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0111539_128810982	3300009094	Populus Rhizosphere	MAKKQGGSKPKAQSALGPIAHALVQDYLGPDHKVIDMERFFTALMQALHDAYALGWKDRGEIE
Ga0111539_129618782	3300009094	Populus Rhizosphere	MTKKKVGSKLKAESALGPIADALVQGYLGPDQRVTNMERFFTTLMQALHDAYVLGWKDRGEIERAK*
Ga0105247_102479992	3300009101	Switchgrass Rhizosphere	MAKKQGASKPKAQSALGPIAHALIQSYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGDIERAK*
Ga0114129_109002643	3300009147	Populus Rhizosphere	MAKKQGGSKPKAQSALGPIAHALIEGYLGPDQKVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0105243_105196552	3300009148	Miscanthus Rhizosphere	MTKKQVGSKLKAQSALGPIAHALIQDYLGPDRRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0111538_103091351	3300009156	Populus Rhizosphere	GGSKPKAQSALGPIAHALIEGYLGPDQKVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0111538_103836242	3300009156	Populus Rhizosphere	MAKKQGGSKLKAQSALGPIAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0111538_115382722	3300009156	Populus Rhizosphere	QGGSKPKAQSALGPIAHALIEGYLGPDQQITNMERFFTTLMQALHDAYVLGWKDRGEIERAK*
Ga0111538_135573022	3300009156	Populus Rhizosphere	MAKRQGGSKPKAQSALGPIAHALIEGYLGADQKVIDMERFFTALMQALHDAYALGWKDRGDIERAK*
Ga0105249_118543871	3300009553	Switchgrass Rhizosphere	MAKKPGASKPKAQSALGPIAHALIQSYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGDIERAK*
Ga0134128_114802662	3300010373	Terrestrial Soil	MAKKQGASKPKAQSALGPIAHALIQSYLGPDQRIIDMERFFTALMQALHDAYALGWKDRGDIERAK*
Ga0105239_128126961	3300010375	Corn Rhizosphere	MAKKQGASKPKAQSALGPIAHALIQSYLGPDQRVIDMERFFTALMQALHDAYALVWKDRGDIERAK*
Ga0134126_112563052	3300010396	Terrestrial Soil	MAKKQGGSKPKAQSAMGPVAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0134126_126746311	3300010396	Terrestrial Soil	MTKKKVGSKLKAQSALGPIAHALIQDSLGPYQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0134127_102438903	3300010399	Terrestrial Soil	MAKKQGGSKPKAQSAMGPIAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERPK*
Ga0134127_131139851	3300010399	Terrestrial Soil	MTKKKVGSKLKAQSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYTLGWKDRGEIERAK*
Ga0134122_102238041	3300010400	Terrestrial Soil	KAQSALGPIAHALIQSYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGDIERAK*
Ga0134122_106829501	3300010400	Terrestrial Soil	SALGPIAHALIQSYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0134123_108442532	3300010403	Terrestrial Soil	MAKKQGGSKPKAQSALGPIAHALIEGYLGPDQRVIDMERFFTALMQALHDAYAL
Ga0105246_101085093	3300011119	Miscanthus Rhizosphere	MTKKQVGSKLKAQSALGPLAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0157304_10262141	3300012882	Soil	MAKKQGGSKPKAQSALGPIAHALIEGYLGPDQRITNMERFFTALMQALHDAYALGWKDRG
Ga0157281_10637252	3300012883	Soil	MTKKQVGSKLKAQSALGPAAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALG
Ga0157300_10949111	3300012884	Soil	ASKPKAQSALGPIAHALIQSYLGPDQRVIDTERFFTALMQALHDAYALGWKDRGEIERAK
Ga0157305_102939871	3300012891	Soil	MTKKKVGSKLKTQSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0157294_100114861	3300012892	Soil	RSAMAKKQVGSKPKARSALGPIAHALVQDYLGPDHMVLDMERFFTALMQALHDAYALGWKDRGEIERPK*
Ga0157284_103038891	3300012893	Soil	MAKKKVGSKPRAMSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0157285_102599391	3300012897	Soil	RSALGPIAQALIQGYLEPDQTAIDLERFFTALMQALHDAYALGWKDRGEIERPK*
Ga0157293_101604981	3300012898	Soil	MTKKKVGSKLKAQSALGPIAHAFIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0157292_100701283	3300012900	Soil	QSALGPVAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0157288_100875561	3300012901	Soil	AQSALGPAAHALIQGYLGPDQRVIYMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0157289_100309483	3300012903	Soil	SKLKAQSALGPVAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0157295_100337324	3300012906	Soil	KKQGGSEPKAQCALGPIADGLIQGYLGPDQRVINMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0157283_102638971	3300012907	Soil	MTKKQVGSKLKAQSALGPVAHALIQDYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0157286_101793551	3300012908	Soil	MAKKQGGSKPKAQSALGPIAHALVQDYLGPDHKVIDMERFFTALMQALHDAYALGWKDRGEIEQAK*
Ga0157302_100995822	3300012915	Soil	MTKKQVGSKLKAQSALGPIAHALIQDYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0157302_102085501	3300012915	Soil	MAKEKVGSKPRAMSALGPIAHALIQGYLGPDQTVIDMERFFTALMQALHDAYALGWKDLGEIERLKSELEKHPAPGERRL*
Ga0157302_104713322	3300012915	Soil	MAKKQGGSKPKAQSALGPIAHALIQGYLGPDHKVIDMERFFTALKEALHDAYGLGWKDRGEVEGTR*
Ga0157310_100823332	3300012916	Soil	MAKKQGASKPKAQSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0157371_110038801	3300013102	Corn Rhizosphere	AKKESPSRDKSAKKVVAKPKAQSALGPIAHALIQSYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0163162_118877892	3300013306	Switchgrass Rhizosphere	MAKKQGGSKPKAQSALGPIAHALVQDYLGPDHKVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0157375_116757612	3300013308	Miscanthus Rhizosphere	MTKKKVGSKLKAQSALGPIAHALLQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0163163_118735502	3300014325	Switchgrass Rhizosphere	MAKKQGGSKPKAQSAMGPIAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0157380_102893263	3300014326	Switchgrass Rhizosphere	MAKKQVGSKLKAQSSLGPAAHALIQGYLGPDQRVIDMERFFTALMPALHDAYALGWKDRGEIERAK*
Ga0157380_106197671	3300014326	Switchgrass Rhizosphere	MTKKQVGSKLKAQSALGPVAHALIQGYLGPDQRVIDMERFFTALMQALHDAYDLGWKDRGEI
Ga0157380_126801852	3300014326	Switchgrass Rhizosphere	MAKKQGGSKPKAQSALGPIAHALIQSYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGDIERAK*
Ga0157376_102566963	3300014969	Miscanthus Rhizosphere	MTKKQVGSKLKAQSALGPVAHALIQGYFGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAR*
Ga0173480_101244811	3300015200	Soil	MAKKQGGSKPKAQSAMGPIAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRG
Ga0173480_111174711	3300015200	Soil	MAKNQGASKPKAQSALGPIAHALIQSYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERPK*
Ga0173478_104066632	3300015201	Soil	MTKKQVGSKLKAQSALGPIAHALRQDYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK*
Ga0132255_1035496521	3300015374	Arabidopsis Rhizosphere	MVKKPLKLTVQARSALAPMAHALLQGHLGPDDRIADPERFLTAVMQALHDAYALGWKDRGEVEKRPK*
Ga0190270_100846232	3300018469	Soil	MTKKKLEARSALGPIAQALIQDHLGLDRKVTDVERFFTALTQALHDAYALGWKDCREVKRRTK
Ga0190271_100448363	3300018481	Soil	MTKKKLEARRGPIAQALIQDQLGLDRKVTDVERFFTALTQALHDAYALGWKDCREVKRRT
Ga0173481_102108361	3300019356	Soil	AQSALGPVAHALIQGYFGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERPK
Ga0173481_102680711	3300019356	Soil	MTKKKVGSKLKAQSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK
Ga0173482_103999641	3300019361	Soil	MTKKKVGSKLKAQSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGEIER
Ga0173479_100752031	3300019362	Soil	SKPKAQSAMGPIAHALIQGYLGPDQRVSNMERFFTALMQALHDAYALGWKDRGEIERAK
Ga0197907_104427391	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MTKKQVGSKLKAQSALGPVAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK
Ga0206356_107843671	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MTKKQVGSKLKAQSALGPVAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERPK
Ga0206352_101404061	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MTKKKVGSKLKAQSALGPIAHALIQDSLGPYQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK
Ga0247792_10300461	3300022880	Soil	MTKKKVGSKLKAQSALGPVAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERPK
Ga0247786_10906101	3300022883	Soil	VWPKLKAQSALGPIAHALIQDYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERA
Ga0207713_11097153	3300025735	Switchgrass Rhizosphere	MTKKKVGSKLKAQSALGPIAHALIQDYLGPDRRVIDMERFFMALMQALHDAYALGWKDRGEIERAK
Ga0207643_101088075	3300025908	Miscanthus Rhizosphere	MTKKQVGSKLKAKSALGPAAHALIQGYLGPDQRIIDMERFFTALMQALHDAYALGWKDRGEIERAK
Ga0207654_111071001	3300025911	Corn Rhizosphere	MIKKKVGSKLKAQSALGPIAHALIQDYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK
Ga0207654_112500132	3300025911	Corn Rhizosphere	MAKKQGASKPKAQSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGDIERAK
Ga0207693_103981052	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTKKQVGSKLKAQSTLGPVAHALIQGYFGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK
Ga0207663_108144621	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTKKKVGSKLKAQSALGPIAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK
Ga0207650_105561821	3300025925	Switchgrass Rhizosphere	KAQSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK
Ga0207644_101616253	3300025931	Switchgrass Rhizosphere	MTKKQVGSKLKAQSALGQAAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK
Ga0207706_100733034	3300025933	Corn Rhizosphere	MTKKQVGSKLKAQSALGPVAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGDIERAK
Ga0207661_115006911	3300025944	Corn Rhizosphere	EEATVSGTRESGMTKKKVGSKLKAQSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGDIERAK
Ga0207712_103231194	3300025961	Switchgrass Rhizosphere	KLKAQNALGPVAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERPK
Ga0207639_123010362	3300026041	Corn Rhizosphere	KQVGSKLKAQSALGPVAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK
Ga0207641_121852482	3300026088	Switchgrass Rhizosphere	MAKKQGASKPKAQSALGPIAHALIQSYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGDIERAK
Ga0207648_101786861	3300026089	Miscanthus Rhizosphere	MTKKQVGSKLKAQSALGPIAHALIEGYLGPDKQTTNMERFFTALMQALHDAYALGWKDRGEIERAK
Ga0207683_100466523	3300026121	Miscanthus Rhizosphere	MTKKQVGSKLKAQSVLGPAAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK
Ga0207428_108729172	3300027907	Populus Rhizosphere	MAKKQGGSKPKAQSAMGPIAHALIQGYLGPDQRVTNMERFFTALMQALHDAYALGWKDRGEIERAK
Ga0268264_101935561	3300028381	Switchgrass Rhizosphere	SKSGQSSLGPVAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK
Ga0310886_101875622	3300031562	Soil	MTKKKVGSKLKAQSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGDIERAK
Ga0310884_102490201	3300031944	Soil	RESGMTKKQVGSKLKAQSALGPAAHALIQGYLGPDQRVIDMERFFTALMQALHDAYALGWKNRGEIERAK
Ga0310906_102410171	3300032013	Soil	KLKAQSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYALGWKDRGEIERAK
Ga0310896_100509833	3300032211	Soil	MTKKKVGSKLKAQSALGPIAHALIQDYLGPYQRVIDMERFFTALMQALHDAYGLGWKDRGEIERAK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063909

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences