Metagenome / Metatranscriptome Family F063907

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063907
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	41 residues
Representative Sequence	MRKRLITPTPENIRTRGEGWLDVERAAVVEVTSEDK
Number of Associated Samples	115
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.07 %
% of genes near scaffold ends (potentially truncated)	94.57 %
% of genes from short scaffolds (< 2000 bps)	90.70 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.116 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.605 % of family members)
Environment Ontology (ENVO)	Unclassified (29.457 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.287 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 15.62% Coil/Unstructured: 84.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF04366	Ysc84	8.53
PF01022	HTH_5	3.88
PF02518	HATPase_c	3.10
PF00118	Cpn60_TCP1	2.33
PF00691	OmpA	2.33
PF11896	GlgE_dom_N_S	1.55
PF01965	DJ-1_PfpI	1.55
PF00313	CSD	1.55
PF13545	HTH_Crp_2	1.55
PF02470	MlaD	1.55
PF08281	Sigma70_r4_2	1.55
PF04041	Glyco_hydro_130	1.55
PF00072	Response_reg	1.55
PF04185	Phosphoesterase	0.78
PF03725	RNase_PH_C	0.78
PF00483	NTP_transferase	0.78
PF00990	GGDEF	0.78
PF00166	Cpn10	0.78
PF00498	FHA	0.78
PF07589	PEP-CTERM	0.78
PF13384	HTH_23	0.78
PF03631	Virul_fac_BrkB	0.78
PF00877	NLPC_P60	0.78
PF13591	MerR_2	0.78
PF12706	Lactamase_B_2	0.78
PF08308	PEGA	0.78
PF02371	Transposase_20	0.78
PF11737	DUF3300	0.78
PF00270	DEAD	0.78
PF13620	CarboxypepD_reg	0.78
PF00027	cNMP_binding	0.78
PF07879	PHB_acc_N	0.78
PF07484	Collar	0.78
PF13458	Peripla_BP_6	0.78
PF00719	Pyrophosphatase	0.78
PF08238	Sel1	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	8.53
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	2.33
COG2152	Predicted glycosyl hydrolase, GH43/DUF377 family	Carbohydrate transport and metabolism [G]	1.55
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	0.78
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG0689	Ribonuclease PH	Translation, ribosomal structure and biogenesis [J]	0.78
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1185	Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	Translation, ribosomal structure and biogenesis [J]	0.78
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.78
COG2123	Exosome complex RNA-binding protein Rrp42, RNase PH superfamily	Intracellular trafficking, secretion, and vesicular transport [U]	0.78
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.78
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.78
COG5394	Polyhydroxyalkanoate (PHA) synthesis regulator protein, binds DNA and PHA	Signal transduction mechanisms [T]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.12 %
Unclassified	root	N/A	34.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.12 %
Unclassified	root	N/A	34.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.12 %
Unclassified	root	N/A	34.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	23.26 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.65 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.78 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.88 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.08 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.53 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	4.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.55 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.78 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.88 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.53 %
Candidatus Melainabacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria	4.65 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.55 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.78 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.53 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.53 %
unclassified Candidatus Melainabacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria	3.10 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.55 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.78 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.78 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.78 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.78 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.53 %
Candidatus Melainabacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	3.10 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.55 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	0.78 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.78 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.78 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.78 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.78 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.53 %
Candidatus Melainabacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	3.10 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.55 %
Paraburkholderia atlantica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia atlantica	0.78 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	0.78 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.78 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.78 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.78 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10073182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1677	Open in IMG/M
3300000955\|JGI1027J12803_106057167	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300000955\|JGI1027J12803_108574517	All Organisms → cellular organisms → Bacteria → Proteobacteria	690	Open in IMG/M
3300001661\|JGI12053J15887_10275839	Not Available	828	Open in IMG/M
3300005174\|Ga0066680_10025832	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3270	Open in IMG/M
3300005457\|Ga0070662_100259863	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300005467\|Ga0070706_100213420	All Organisms → cellular organisms → Bacteria	1802	Open in IMG/M
3300005537\|Ga0070730_10167639	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1481	Open in IMG/M
3300005559\|Ga0066700_10586997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300005561\|Ga0066699_10340608	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1071	Open in IMG/M
3300005576\|Ga0066708_10805273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300005614\|Ga0068856_102055144	Not Available	581	Open in IMG/M
3300005834\|Ga0068851_10022042	All Organisms → cellular organisms → Bacteria	3098	Open in IMG/M
3300005841\|Ga0068863_100160177	All Organisms → cellular organisms → Bacteria	2156	Open in IMG/M
3300006028\|Ga0070717_10724876	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	904	Open in IMG/M
3300006028\|Ga0070717_10994256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300006047\|Ga0075024_100537784	Not Available	618	Open in IMG/M
3300006059\|Ga0075017_100742717	Not Available	756	Open in IMG/M
3300006175\|Ga0070712_101053636	All Organisms → cellular organisms → Bacteria → Proteobacteria	705	Open in IMG/M
3300006175\|Ga0070712_101939810	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300006176\|Ga0070765_100306640	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300006871\|Ga0075434_100805856	All Organisms → cellular organisms → Bacteria → Proteobacteria	955	Open in IMG/M
3300009038\|Ga0099829_11487230	Not Available	559	Open in IMG/M
3300009101\|Ga0105247_10423889	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300009137\|Ga0066709_104059780	Not Available	532	Open in IMG/M
3300009176\|Ga0105242_10545418	Not Available	1111	Open in IMG/M
3300009632\|Ga0116102_1030214	Not Available	1812	Open in IMG/M
3300010048\|Ga0126373_10931494	Not Available	933	Open in IMG/M
3300010335\|Ga0134063_10095950	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300010361\|Ga0126378_10469673	Not Available	1373	Open in IMG/M
3300010373\|Ga0134128_12048258	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300010375\|Ga0105239_10267757	Not Available	1921	Open in IMG/M
3300010376\|Ga0126381_103100454	Not Available	658	Open in IMG/M
3300010376\|Ga0126381_104670938	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300011120\|Ga0150983_16653345	Not Available	554	Open in IMG/M
3300012200\|Ga0137382_11313711	Not Available	510	Open in IMG/M
3300012201\|Ga0137365_10337151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1115	Open in IMG/M
3300012206\|Ga0137380_11398457	Not Available	584	Open in IMG/M
3300012208\|Ga0137376_10365093	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300012211\|Ga0137377_10409923	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300012353\|Ga0137367_10501646	Not Available	855	Open in IMG/M
3300012359\|Ga0137385_10708033	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300012923\|Ga0137359_10839859	Not Available	794	Open in IMG/M
3300012944\|Ga0137410_11114811	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300013307\|Ga0157372_10762829	Not Available	1125	Open in IMG/M
3300016294\|Ga0182041_10465219	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1089	Open in IMG/M
3300016294\|Ga0182041_10532500	All Organisms → cellular organisms → Bacteria → Proteobacteria	1023	Open in IMG/M
3300016319\|Ga0182033_10728881	Not Available	869	Open in IMG/M
3300016341\|Ga0182035_10232528	Not Available	1478	Open in IMG/M
3300016357\|Ga0182032_10896535	Not Available	753	Open in IMG/M
3300016387\|Ga0182040_11520415	Not Available	569	Open in IMG/M
3300016404\|Ga0182037_10003825	All Organisms → cellular organisms → Bacteria	8202	Open in IMG/M
3300016404\|Ga0182037_10072995	All Organisms → cellular organisms → Bacteria → Acidobacteria	2382	Open in IMG/M
3300016445\|Ga0182038_11809012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria	551	Open in IMG/M
3300017924\|Ga0187820_1004857	All Organisms → cellular organisms → Bacteria → Acidobacteria	3117	Open in IMG/M
3300017927\|Ga0187824_10080037	All Organisms → cellular organisms → Bacteria → Acidobacteria	1035	Open in IMG/M
3300017929\|Ga0187849_1230034	Not Available	713	Open in IMG/M
3300018006\|Ga0187804_10404834	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300018028\|Ga0184608_10378964	Not Available	617	Open in IMG/M
3300018433\|Ga0066667_10047656	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2562	Open in IMG/M
3300018468\|Ga0066662_11911913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia atlantica	621	Open in IMG/M
3300018468\|Ga0066662_12611346	Not Available	534	Open in IMG/M
3300020581\|Ga0210399_10372382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1192	Open in IMG/M
3300020583\|Ga0210401_10067376	All Organisms → cellular organisms → Bacteria → Proteobacteria	3372	Open in IMG/M
3300021171\|Ga0210405_10210486	Not Available	1541	Open in IMG/M
3300021171\|Ga0210405_10257117	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1382	Open in IMG/M
3300021560\|Ga0126371_11662077	Not Available	763	Open in IMG/M
3300022557\|Ga0212123_10155901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1754	Open in IMG/M
3300022557\|Ga0212123_10798993	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300022731\|Ga0224563_1008972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300024288\|Ga0179589_10273259	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300025419\|Ga0208036_1026907	All Organisms → cellular organisms → Bacteria → Acidobacteria	1111	Open in IMG/M
3300025906\|Ga0207699_11125083	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300025910\|Ga0207684_10153185	All Organisms → cellular organisms → Bacteria	1984	Open in IMG/M
3300025936\|Ga0207670_11744192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300026088\|Ga0207641_10309590	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300026301\|Ga0209238_1091643	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300026314\|Ga0209268_1123849	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300026316\|Ga0209155_1016774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	3119	Open in IMG/M
3300026324\|Ga0209470_1336540	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300026557\|Ga0179587_10491878	Not Available	804	Open in IMG/M
3300026890\|Ga0207781_1016486	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300026934\|Ga0207816_1033222	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300027014\|Ga0207815_1006855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1523	Open in IMG/M
3300027063\|Ga0207762_1012153	All Organisms → cellular organisms → Bacteria	1520	Open in IMG/M
3300027330\|Ga0207777_1063199	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300027824\|Ga0209040_10504429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300027857\|Ga0209166_10230795	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300027889\|Ga0209380_10796694	Not Available	536	Open in IMG/M
3300028047\|Ga0209526_10690455	Not Available	644	Open in IMG/M
3300030967\|Ga0075399_11251652	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300031057\|Ga0170834_100069157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	631	Open in IMG/M
3300031231\|Ga0170824_114100161	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	886	Open in IMG/M
3300031543\|Ga0318516_10225492	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1083	Open in IMG/M
3300031543\|Ga0318516_10773723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria	543	Open in IMG/M
3300031561\|Ga0318528_10075384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	1743	Open in IMG/M
3300031573\|Ga0310915_11056567	Not Available	565	Open in IMG/M
3300031679\|Ga0318561_10682341	Not Available	565	Open in IMG/M
3300031708\|Ga0310686_105664094	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300031708\|Ga0310686_113920359	All Organisms → cellular organisms → Bacteria	3548	Open in IMG/M
3300031713\|Ga0318496_10126560	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1385	Open in IMG/M
3300031715\|Ga0307476_10256089	Not Available	1279	Open in IMG/M
3300031719\|Ga0306917_11296878	Not Available	563	Open in IMG/M
3300031720\|Ga0307469_10474186	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300031723\|Ga0318493_10016480	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	3170	Open in IMG/M
3300031744\|Ga0306918_11278335	Not Available	565	Open in IMG/M
3300031753\|Ga0307477_10634031	Not Available	719	Open in IMG/M
3300031770\|Ga0318521_10441089	All Organisms → cellular organisms → Bacteria → Proteobacteria	779	Open in IMG/M
3300031819\|Ga0318568_10983616	Not Available	521	Open in IMG/M
3300031823\|Ga0307478_10888355	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	746	Open in IMG/M
3300031880\|Ga0318544_10326273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	596	Open in IMG/M
3300031890\|Ga0306925_10644276	All Organisms → cellular organisms → Bacteria → Acidobacteria	1114	Open in IMG/M
3300031896\|Ga0318551_10115882	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1439	Open in IMG/M
3300031897\|Ga0318520_10555226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	712	Open in IMG/M
3300031910\|Ga0306923_10520420	Not Available	1343	Open in IMG/M
3300031912\|Ga0306921_11056113	Not Available	913	Open in IMG/M
3300031942\|Ga0310916_10910713	Not Available	737	Open in IMG/M
3300031954\|Ga0306926_10339195	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300032008\|Ga0318562_10100684	Not Available	1640	Open in IMG/M
3300032042\|Ga0318545_10047028	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1453	Open in IMG/M
3300032042\|Ga0318545_10107478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium	980	Open in IMG/M
3300032059\|Ga0318533_10502444	Not Available	889	Open in IMG/M
3300032068\|Ga0318553_10035160	All Organisms → cellular organisms → Bacteria	2420	Open in IMG/M
3300032076\|Ga0306924_11280869	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300032091\|Ga0318577_10093998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1398	Open in IMG/M
3300032174\|Ga0307470_10212541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1246	Open in IMG/M
3300032261\|Ga0306920_101721983	Not Available	887	Open in IMG/M
3300032261\|Ga0306920_102820888	Not Available	661	Open in IMG/M
3300032261\|Ga0306920_103171858	Not Available	616	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.25%
Host-Associated	Host-Associated	7.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.95%
Aquatic	Environmental → Aquatic	9.30%
Plants	Host-Associated → Plants	7.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.95%
Freshwater	Environmental → Aquatic → Freshwater	5.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.10%
Sediment	Environmental → Aquatic → Sediment	2.33%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.22%
Loam	Environmental → Terrestrial → Soil → Loam	14.73%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.43%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.33%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.55%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.55%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.55%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.55%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.78%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022731	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025419	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026890	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 51 (SPAdes)	Environmental	Open in IMG/M
3300026934	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 10 (SPAdes)	Environmental	Open in IMG/M
3300027014	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4 (SPAdes)	Environmental	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100731821	3300000567	Peatlands Soil	MRKRLITPAPESIRARGEGWLDVERAAVVEVTSEDKGFPIELAFGSEDARG
JGI1027J12803_1060571672	3300000955	Soil	MRKRLITPTPENIQTRGQGWLDVERAAVVEVTSEDAECPVESAFSSGD
JGI1027J12803_1085745171	3300000955	Soil	MRKRLITPTPENIRTRGEGWLDVERAALVEVTSEDQDFP
JGI12053J15887_102758391	3300001661	Forest Soil	MRKRLIDSTPESMRTRGEGWLDIQSAAVVEVTSEDPNCP
Ga0066680_100258323	3300005174	Soil	LCMRKRLITPTQGTVRSRGEGWLDVERAAIVEITSEDKKFPG*
Ga0070662_1002598631	3300005457	Corn Rhizosphere	MRKRLIAETSDIVRPRVEDWLDVERTAVVEVTSEDKDHPVEY
Ga0070706_1002134203	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRKRLITATPETVRSRGEGWLDVERAAVVQITSEDKHFPV*
Ga0070730_101676393	3300005537	Surface Soil	MRKRLITPTEENIPIRAEGSLDIERAAVLEVTSEDKDFPVESAFVSGD
Ga0066700_105869971	3300005559	Soil	MRTRLIIPTPETVRSRAERWLDVERAAVVEITSEEKGYPVESAFVSGE
Ga0066699_103406081	3300005561	Soil	MRKRLITPTQGTVRSRGEGWLDVERAAIVEITSEDKKFPG*
Ga0066708_108052731	3300005576	Soil	MRKRLITPTPESIRTRAESWLDVERAAIVEVTSEDKDCPVESAFVSGD
Ga0068856_1020551442	3300005614	Corn Rhizosphere	MRKRLITATAEAIGTRGEGWLDIERAAVVEVTSEEGDY
Ga0068851_100220421	3300005834	Corn Rhizosphere	MRKRLIAETSDIVRPRVEDWLDVERTAVVEVTSEDKDHPVEYAFSPAEAA
Ga0068863_1001601771	3300005841	Switchgrass Rhizosphere	MRKRFIAPTPEAARPHGEGWLDINRTAVVEITSEEEGFPIES
Ga0070717_107248761	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRKRLITPTQDNIRTRGEGWLDVERAAVVEFTSED
Ga0070717_109942561	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRKRLITPTQGTVRSHGKGWLDVERAAMVEITSEE
Ga0075024_1005377843	3300006047	Watersheds	MRKQLIPPTPETVRPYGEGWLDLERAAAVEVTSEEE
Ga0075017_1007427173	3300006059	Watersheds	MRKRLITPTPESIRAHGEDWLDVEQAAVVEVTSEDKDF
Ga0070712_1010536361	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLKRLITATAERPRTLGQGWLDLERAAVVEVTSED
Ga0070712_1019398101	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRKRLVTPTAERIRARGEGIDVERAAVVEVTSEDKDFP
Ga0070765_1003066401	3300006176	Soil	MRKRLITPTPEHIWTRCENWLDVEHAAAVEVTSEDKDYPVESAF
Ga0075434_1008058562	3300006871	Populus Rhizosphere	MRKRLITPTPENIQTHREGWLDVERVAIVEITSED
Ga0099829_114872302	3300009038	Vadose Zone Soil	MRKRLITAPTPETVPSRGKGWLDLERTAVVEVTSEDKDYP
Ga0105247_104238891	3300009101	Switchgrass Rhizosphere	LGCMRKRLIAPTPVRIRARGEGGLDVERAAVVEVTS*
Ga0066709_1040597802	3300009137	Grasslands Soil	MRKRLITSTPENIRTQSEGWLDVEHAAVVEVTSEDAQ
Ga0105242_105454181	3300009176	Miscanthus Rhizosphere	MRKRLIAPTPVRIRARGEGGLDVERAAVVEVTSEDKDFP
Ga0116102_10302142	3300009632	Peatland	MRKRLITPTPERVRPHGEGWLDLERAAAVEVSSEEED
Ga0126373_109314943	3300010048	Tropical Forest Soil	MRKRLITPTEKNIRTRSVGWLDVERAALVEVNSEE
Ga0134063_100959501	3300010335	Grasslands Soil	MRNRLVTPTLETVRSSGEAWLEIEGAAIVEITSEEKDYQVESAVV
Ga0126378_104696731	3300010361	Tropical Forest Soil	MRKRLIPPPSETIRGHRGDGLDVERAAIVEVTSEDKNFPVESAFG
Ga0134128_120482582	3300010373	Terrestrial Soil	MRKRLITPTTENIPSPTEGWLDVGRVAVVEVTSEDQEFPVESAFVSEEAE
Ga0105239_102677572	3300010375	Corn Rhizosphere	MRKRLLDSTPESIRARSEGWLDIESAAVVEVTSED
Ga0126381_1031004541	3300010376	Tropical Forest Soil	MRKRFITPTAESIRTRGQGWLDVERAAVVEVTSEDKDFPVESVF
Ga0126381_1046709381	3300010376	Tropical Forest Soil	MRKRFITPIAESIRTRGQGWLDVERAAVVEVTSEDKDFPVESVFVSGDE
Ga0150983_166533451	3300011120	Forest Soil	MRKRLITPPAESIRTRGEGWLDVERAAVVEVTSEDKDFP
Ga0137382_113137111	3300012200	Vadose Zone Soil	MRKRLITPTPERIRARGEGWLDVERSAVVEVTSEDKDFPVELAFGSD
Ga0137365_103371511	3300012201	Vadose Zone Soil	MRKRLITPTPETIPSRGEGRLDLEGTAVVEVTSEEKDHPV
Ga0137380_113984571	3300012206	Vadose Zone Soil	MRKRLITAPTPETVPSRGEGWLDLERTAVVEVTSEDKD
Ga0137376_103650931	3300012208	Vadose Zone Soil	MRKRLITPTPANIRTRGDGWLDVERAAVVEVTSEDEDCPVESAFGS
Ga0137377_104099231	3300012211	Vadose Zone Soil	MRKRLITAPTPETVSSRGEGWLDLERTAVVEVTSE
Ga0137367_105016461	3300012353	Vadose Zone Soil	MRKRLITPTQETVRSRGEGWLDVERAAMVEITSED
Ga0137385_107080332	3300012359	Vadose Zone Soil	MRKRLVTPTLETVRSSGEAWLDIEGAAIVEITSEEKDYPV
Ga0137359_108398591	3300012923	Vadose Zone Soil	MRKRLIDSTPASIRARGEGWLDIESAAVVEVTSEDRNWPVESAFVSG
Ga0137410_111148112	3300012944	Vadose Zone Soil	MRKQLITPRPETVRSRSESWLDIERAAMVEITSEDRNFPI
Ga0157372_107628292	3300013307	Corn Rhizosphere	MRKRLIAPTPVRIRARGEGGLDVERAAVVEVTSEDKDFPVELAFGSEDAPGSRAAAPGVQ
Ga0182041_104652193	3300016294	Soil	MRKRLITPSEENIRTRSVGWLDVERAAVVEVTSEESDHPVE
Ga0182041_105325003	3300016294	Soil	MRKRLIDSTAEPLGTPGQGWLDLERAAVVEVTSEDEHFPVESAF
Ga0182033_107288813	3300016319	Soil	MRKRLITPTAETIRTRGEGWLDVERNAVVEVTSEDED
Ga0182035_102325283	3300016341	Soil	MRKRLIPPPSETIRALRGDGLDVERAAIVEVTSEDKNFPVESAFGSRDLPGWHAA
Ga0182032_108965353	3300016357	Soil	MRKRLITPTPENIRTRDEGWLDLERAAVVEVTSEDKDFP
Ga0182040_115204151	3300016387	Soil	MRKRLITSTSERIRTRGEGWLDVERAAVVEFTSEDTD
Ga0182037_100038251	3300016404	Soil	MRKRLITSPPETVRPHCEGWLDLERAAVVEVTSEEEGF
Ga0182037_100729951	3300016404	Soil	MRKRLITPTAETIRTRGEGWLDVERNAVVEVTSEDEDYPVESAFASEDARG
Ga0182038_118090122	3300016445	Soil	MRKRFITPIAESIRTRGQGWLDVERAAVVEVTSEDKDFPVESV
Ga0187820_10048577	3300017924	Freshwater Sediment	MRKRLITPPAETIRACAGGGIDIERAAVVEVTSEDKDFPIESAFVSVDSR
Ga0187824_100800371	3300017927	Freshwater Sediment	MCMRKRIITPTAETIRSREEGWLEVERAAIVEITSDDKDFPVEWVFSSG
Ga0187849_12300341	3300017929	Peatland	MRKRLITPTPERVRPHGEGWLDLERAAAVEVSSEEEDY
Ga0187804_104048341	3300018006	Freshwater Sediment	MRKRLISSTPERVRPHGEGWLDLERAAAVEVSSEEE
Ga0184608_103789642	3300018028	Groundwater Sediment	MRKRLITPTPETVRSRGEGWLEIERVAIVEITSEEKDYP
Ga0066667_100476561	3300018433	Grasslands Soil	MRKRLIDSPPESIQARGDGRLYIESAAVVEVTSEDRNWPVESA
Ga0066662_119119131	3300018468	Grasslands Soil	HMRKRLITPTPETVRSRGEGWLDVERAAIVLRRDDS
Ga0066662_126113461	3300018468	Grasslands Soil	MRKRLITPTPEVIQSRGEGWLDIARAAVVEFSSEDNDY
Ga0210399_103723822	3300020581	Soil	MRKRLITPTPEHIRTRGEDWLDVERAPVVEVTSEDS
Ga0210401_100673766	3300020583	Soil	MRKRLITATAERSRTRGEGWLDVERAAVVEVTSEDKDF
Ga0210405_102104864	3300021171	Soil	MRKRLITATAERSRTRGEGWLDVERAAVVEVTSED
Ga0210405_102571171	3300021171	Soil	MRKQLIPPTSETVRPHGEGWLDLERAATVEVTSEEEN
Ga0126371_116620771	3300021560	Tropical Forest Soil	MRKRLIDPTAERFGTLGQGWLDLERAAVVEVTSEDEH
Ga0212123_101559014	3300022557	Iron-Sulfur Acid Spring	MRKRLITPTQEAVRPSGEGWLDVERAAVFEFTSEDKD
Ga0212123_107989931	3300022557	Iron-Sulfur Acid Spring	MRKRPIAPATESARNHRESWLDVERAAVVEVTSEDPDYPIELALVSEGSRG
Ga0224563_10089723	3300022731	Soil	MRKRLITPTQGTVRSRGEGWLDVERAAMVEITSEEKDYP
Ga0179589_102732593	3300024288	Vadose Zone Soil	MRKRLITPTPETVRSRGEGWLDVERAAMVELTSEQK
Ga0208036_10269071	3300025419	Peatland	MRKRLITPTPETVRPHGDGWLNLERTAAVEVTSEEENFPV
Ga0207699_111250831	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MRKRLVTPTAERIRARGEGWLDVERAAVVEVTSEDKNFP
Ga0207684_101531851	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRKRLITATPETVRSRGEGWLDVERAAVVQITSEDKHFPV
Ga0207670_117441921	3300025936	Switchgrass Rhizosphere	MRKRLIAETSDIVRPRVEDWLDVERTAVVEVTSEDKDHPVEYAFS
Ga0207641_103095902	3300026088	Switchgrass Rhizosphere	MRKRFIAPTPEAARPHGEGWLDINRTAVVEITSEEEGSPI
Ga0209238_10916433	3300026301	Grasslands Soil	MRKRLVTPTLETVRSSGEAWLDIERAAIVEITSEEKDYPVESAFV
Ga0209268_11238492	3300026314	Soil	MRKRLVTPTLETVQSSGEAWLDIEGAAIVEITSEEK
Ga0209155_10167745	3300026316	Soil	MRNRLVTPTLETVRSSGEAWLDIERAAIVEITSEEKDYPVESAFVLGEA
Ga0209470_13365401	3300026324	Soil	MRKRLITPTPETVRSRAEGWLDVERAAIVEITSEE
Ga0179587_104918781	3300026557	Vadose Zone Soil	MRKRLIDSTPESIRTRGEGWLDIESAAVVEVTSEDPDCPGES
Ga0207781_10164862	3300026890	Tropical Forest Soil	MRKRLITPTEENIRTRSVGCLDVERAAVVEVTSEESD
Ga0207816_10332222	3300026934	Tropical Forest Soil	MRKRLITPTEENIRTRSVGWLDVERAAVVEVTSEENDQPVESAFVLGDA
Ga0207815_10068553	3300027014	Tropical Forest Soil	MRKRLITPTEENIRTRSVGCLDVERAAVVEVTSEESDHPVESAFVLGDAP
Ga0207762_10121534	3300027063	Tropical Forest Soil	MRKRLITPTEENIRTRSVGWLGVERAAVVEVTSEENDYPVESA
Ga0207777_10631991	3300027330	Tropical Forest Soil	MRKRLITPTEENIRTRSVGWLGVERAAVVEVTSEENDYPVESAFVLG
Ga0209040_105044291	3300027824	Bog Forest Soil	MRKRLISPTPDNMRTRGEGWLDVERAAAVVEVTSEDKD
Ga0209166_102307951	3300027857	Surface Soil	MRKRLITPTEENIPIRAEGSLDIERAAVLEVTSEDKDF
Ga0209380_107966942	3300027889	Soil	MRKRLITPTPERVRTCGEGWLDVEHAAAVEVTSEDKD
Ga0209526_106904551	3300028047	Forest Soil	MRKRLITPTRESIATHDEDWLDVERTAVVEVTSEDE
Ga0075399_112516522	3300030967	Soil	MRKRLITPTPENIRTRGEGWLDVERAAVVEVTSEDK
Ga0170834_1000691572	3300031057	Forest Soil	MRKRLIDPTAERPGTLGQGWLDLERAAVVEVTSEDK
Ga0170824_1141001611	3300031231	Forest Soil	MRKRLITPTPESIRTRGDSWLDVEQQAVVEVTSEDKNYPVESAFVS
Ga0318516_102254923	3300031543	Soil	MRKRLITPTEENTRTRSAGWLDVERAAVVEVTSEESDHPV
Ga0318516_107737232	3300031543	Soil	MRKRFITPIAESIRTRGQGWLDVQRAAVVEVTSEDKDF
Ga0318528_100753845	3300031561	Soil	MRKRFITPTAESIRTRGQGWLDVERAAVVEVTSEDKDFPVESVFVSGDE
Ga0310915_110565671	3300031573	Soil	MRKRLIPPPSETIRALRGDGLDVERAAIVEVTSEEKNFPVESAFGSRD
Ga0318561_106823411	3300031679	Soil	MRKRLITPTAERLGTLGQGWLDLERAAVVEVTSEDEHFPV
Ga0310686_1056640941	3300031708	Soil	MRKRLITPTTETVRPDAGGWLDLEHAAVVEVTSEAEGFPVES
Ga0310686_1139203595	3300031708	Soil	MRKRLTTPTQENIRTRSEGWLDFERAAVVEVTSEDQDYPVEGAFGSAEAPG
Ga0318496_101265601	3300031713	Soil	MRKRLITPTEENILTRSVCWLDVERAAVVEVTSEE
Ga0307476_102560893	3300031715	Hardwood Forest Soil	MRKRLIVQAPKLRTRSGLDLEHAAVVEVTSEDKDFPVESAFASEEARGWRA
Ga0306917_112968782	3300031719	Soil	MRKRLITSTSERIRTRGEGWLDVERAAVVEFTSEDTDYPIEAAFVSG
Ga0307469_104741863	3300031720	Hardwood Forest Soil	RKRLITTTPESIRTRGESWLDVEQQAVVEVKAEDKDYPVESAFVSEDARG
Ga0318493_100164807	3300031723	Soil	MRKRLITPTSEPLGTQGGLDLEREAVVEVTSEDEH
Ga0306918_112783351	3300031744	Soil	MRKRLITPTAERLGTLGQGWLDLERAAVVEVTSEEEHFPV
Ga0307477_106340311	3300031753	Hardwood Forest Soil	VNGSKLGSVRKRLIDPTAERPGTLAEGWLDLERAAVVEVTSEDNDF
Ga0318521_104410891	3300031770	Soil	MRKRLITPTAERLGTLGQGWLDLERAAVVEVTSEDEHFPVE
Ga0318568_109836162	3300031819	Soil	MRKRLIDSTAEPLGTPGQGWLDLERAAVVEVTSEDE
Ga0307478_108883551	3300031823	Hardwood Forest Soil	MRKRLITPTAENIRTRGEGWLDVERAAVVEVTSEDKDFPVESAFAFEDAR
Ga0318544_103262731	3300031880	Soil	MRKRFITPTAESIRTRGQGWLDVERAAVVEVTSEDKDFPVESVFVS
Ga0306925_106442761	3300031890	Soil	MRKRFITPTAESIRTRGQGWLDVERAAVVEVTSEDKDFPVESVFVSGD
Ga0318551_101158823	3300031896	Soil	MRKRLITPSEENIRTRSVGWLDVERAAVVEVTSEES
Ga0318520_105552261	3300031897	Soil	MRKRFITPTAESIRTRGQGWLDVEHAAVVEVTSEDEDFPLESVFVS
Ga0306923_105204202	3300031910	Soil	MRKRLITSTSERIRTRGEGWLDVERAAVVEFTSEDTDYPI
Ga0306921_110561132	3300031912	Soil	MRKRLITPTEENIWTRSVGWLDVECAALVEVTSEENDHPVESAFV
Ga0310916_109107131	3300031942	Soil	MRKRLIDSTAEPLGTPGQGWLDLERAAVVEVTSEDERYP
Ga0306926_103391951	3300031954	Soil	MRKRLITPTEENIRTRSVGWLDVERAAVVEVTSEENDQPVE
Ga0318562_101006841	3300032008	Soil	MRKRLITPTSEPLGTQGGLDLEREAVVEVTSEDEHFPVES
Ga0318545_100470283	3300032042	Soil	MRKRLITPTEENILTRSVCWLDVERAAVVEVTSEESDHPV
Ga0318545_101074781	3300032042	Soil	MRKRFITPIAESIRTRGQGWLDVQRAAVVEVTSEDKDFPVESVF
Ga0318533_105024441	3300032059	Soil	MRKRLITPTAETIRTRGEGWLDVERNAVVEVTSEDEDYPVESAFASED
Ga0318553_100351606	3300032068	Soil	MRKRLITPTEENIRTRSVGWLDVERAAVVEVTSEESDRPVES
Ga0306924_112808692	3300032076	Soil	MRKRLITPTSGRIRPCGEGWLDVERAAVVEFTSEDTDHPIEA
Ga0318577_100939981	3300032091	Soil	MRKRLITPTAEPLGALGQVWLDLERAAVVEVTSEDEHF
Ga0307470_102125413	3300032174	Hardwood Forest Soil	MRKRLIAPTPETIRARGEGWLDIERTAVVEVTSEDKN
Ga0306920_1017219831	3300032261	Soil	MRKRLITPTAERLGTLGQGWLDLERAAVVEVTSEEE
Ga0306920_1028208881	3300032261	Soil	MRKRLIPPPSETIRARRGDGLDVERAAIVEVTSEDKNFPVESAF
Ga0306920_1031718582	3300032261	Soil	MRKRLITSTSERIRTRGEGWLDVEHAAVVEFTSEETDYPIEAAF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063907

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences