Metagenome / Metatranscriptome Family F063904

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063904
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	93 residues
Representative Sequence	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA
Number of Associated Samples	105
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.09 %
% of genes near scaffold ends (potentially truncated)	37.98 %
% of genes from short scaffolds (< 2000 bps)	86.05 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.450 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (26.357 % of family members)
Environment Ontology (ENVO)	Unclassified (36.434 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.488 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.81% β-sheet: 0.00% Coil/Unstructured: 49.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF15919	HicB_lk_antitox	5.43
PF07690	MFS_1	4.65
PF12637	TSCPD	4.65
PF01797	Y1_Tnp	3.88
PF02452	PemK_toxin	2.33
PF02867	Ribonuc_red_lgC	2.33
PF07927	HicA_toxin	1.55
PF13271	DUF4062	1.55
PF13191	AAA_16	0.78
PF00106	adh_short	0.78
PF13676	TIR_2	0.78
PF00296	Bac_luciferase	0.78
PF07676	PD40	0.78
PF01425	Amidase	0.78
PF03681	Obsolete Pfam Family	0.78
PF02470	MlaD	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	3.88
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	2.33
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	2.33
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	1.55
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.78
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.45 %
Unclassified	root	N/A	1.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.45 %
Unclassified	root	N/A	1.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.45 %
Unclassified	root	N/A	1.55 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	86.82 %
Unclassified	root	N/A	1.55 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	74.42 %
Unclassified	root	N/A	1.55 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	55.04 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.10 %
Unclassified	root	N/A	1.55 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_1_20CM_4_65_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	55.04 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	1.55 %
Unclassified	root	N/A	1.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.78 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_1_20CM_4_65_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	55.04 %
unclassified Methylocystaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae	1.55 %
Unclassified	root	N/A	1.55 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.78 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.78 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium 13_1_20CM_4_65_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	55.04 %
Methylocystaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	1.55 %
Unclassified	root	N/A	1.55 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.78 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908009\|FWIRA_GRAM18402F8NAV	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	501	Open in IMG/M
2170459017\|G14TP7Y01EVYVU	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	672	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101532015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1280	Open in IMG/M
3300002245\|JGIcombinedJ26739_101180102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	654	Open in IMG/M
3300005167\|Ga0066672_10265669	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300005175\|Ga0066673_10168170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1232	Open in IMG/M
3300005176\|Ga0066679_10003841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	6711	Open in IMG/M
3300005177\|Ga0066690_10107014	All Organisms → cellular organisms → Bacteria → Proteobacteria	1803	Open in IMG/M
3300005177\|Ga0066690_10436311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	888	Open in IMG/M
3300005178\|Ga0066688_10440938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	843	Open in IMG/M
3300005179\|Ga0066684_10118241	All Organisms → cellular organisms → Bacteria → Proteobacteria	1647	Open in IMG/M
3300005179\|Ga0066684_10376793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	951	Open in IMG/M
3300005184\|Ga0066671_10862661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	575	Open in IMG/M
3300005187\|Ga0066675_10066247	All Organisms → cellular organisms → Bacteria → Proteobacteria	2282	Open in IMG/M
3300005187\|Ga0066675_10532231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	880	Open in IMG/M
3300005187\|Ga0066675_11373498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	519	Open in IMG/M
3300005332\|Ga0066388_103322830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	822	Open in IMG/M
3300005434\|Ga0070709_10084545	All Organisms → cellular organisms → Bacteria → Proteobacteria	2078	Open in IMG/M
3300005435\|Ga0070714_100069316	All Organisms → cellular organisms → Bacteria → Proteobacteria	3045	Open in IMG/M
3300005435\|Ga0070714_100094295	All Organisms → cellular organisms → Bacteria	2627	Open in IMG/M
3300005436\|Ga0070713_100032729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4156	Open in IMG/M
3300005436\|Ga0070713_100866513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	868	Open in IMG/M
3300005439\|Ga0070711_101012511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	713	Open in IMG/M
3300005445\|Ga0070708_100630791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	1010	Open in IMG/M
3300005445\|Ga0070708_101939040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	546	Open in IMG/M
3300005450\|Ga0066682_10715341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	614	Open in IMG/M
3300005451\|Ga0066681_10160896	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300005454\|Ga0066687_10528503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	699	Open in IMG/M
3300005467\|Ga0070706_100781872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	884	Open in IMG/M
3300005471\|Ga0070698_100803388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	885	Open in IMG/M
3300005545\|Ga0070695_101904718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	500	Open in IMG/M
3300005554\|Ga0066661_10003077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	7322	Open in IMG/M
3300005557\|Ga0066704_10482029	All Organisms → cellular organisms → Bacteria → Proteobacteria	818	Open in IMG/M
3300005560\|Ga0066670_10094636	All Organisms → cellular organisms → Bacteria → Proteobacteria	1660	Open in IMG/M
3300005560\|Ga0066670_10613426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	662	Open in IMG/M
3300005560\|Ga0066670_10633650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	649	Open in IMG/M
3300005563\|Ga0068855_102576610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	505	Open in IMG/M
3300005569\|Ga0066705_10453660	All Organisms → cellular organisms → Bacteria → Proteobacteria	803	Open in IMG/M
3300005587\|Ga0066654_10073448	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300005764\|Ga0066903_102845484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	939	Open in IMG/M
3300005841\|Ga0068863_101134338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	787	Open in IMG/M
3300006031\|Ga0066651_10069263	All Organisms → cellular organisms → Bacteria → Proteobacteria	1703	Open in IMG/M
3300006031\|Ga0066651_10261312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	918	Open in IMG/M
3300006032\|Ga0066696_10705490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	648	Open in IMG/M
3300006046\|Ga0066652_100935133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	826	Open in IMG/M
3300006175\|Ga0070712_101218897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	655	Open in IMG/M
3300006176\|Ga0070765_100727715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	937	Open in IMG/M
3300006755\|Ga0079222_10072596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	1700	Open in IMG/M
3300006791\|Ga0066653_10045578	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300006854\|Ga0075425_101431248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	782	Open in IMG/M
3300006893\|Ga0073928_10000249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	130867	Open in IMG/M
3300006954\|Ga0079219_10861302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	725	Open in IMG/M
3300007788\|Ga0099795_10054490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	1466	Open in IMG/M
3300007788\|Ga0099795_10132204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1008	Open in IMG/M
3300009143\|Ga0099792_10534777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	739	Open in IMG/M
3300010159\|Ga0099796_10156955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	899	Open in IMG/M
3300010320\|Ga0134109_10046975	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300010326\|Ga0134065_10213047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	704	Open in IMG/M
3300010364\|Ga0134066_10090283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	871	Open in IMG/M
3300010398\|Ga0126383_13154383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	538	Open in IMG/M
3300011119\|Ga0105246_10885079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	799	Open in IMG/M
3300012198\|Ga0137364_10095306	All Organisms → cellular organisms → Bacteria → Proteobacteria	2086	Open in IMG/M
3300012198\|Ga0137364_10322050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	1150	Open in IMG/M
3300012198\|Ga0137364_11392345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	519	Open in IMG/M
3300012199\|Ga0137383_10225662	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300012200\|Ga0137382_10239195	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300012203\|Ga0137399_10210625	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300012208\|Ga0137376_11268613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	627	Open in IMG/M
3300012285\|Ga0137370_10865177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	560	Open in IMG/M
3300012582\|Ga0137358_10281920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	1129	Open in IMG/M
3300012918\|Ga0137396_10429210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	980	Open in IMG/M
3300012922\|Ga0137394_11602134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	508	Open in IMG/M
3300012923\|Ga0137359_11778574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	503	Open in IMG/M
3300012924\|Ga0137413_11050993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	641	Open in IMG/M
3300012925\|Ga0137419_11076447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	669	Open in IMG/M
3300012960\|Ga0164301_10167564	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300012988\|Ga0164306_11010453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	686	Open in IMG/M
3300014150\|Ga0134081_10065338	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300014166\|Ga0134079_10272689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	740	Open in IMG/M
3300015241\|Ga0137418_10098735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2629	Open in IMG/M
3300015241\|Ga0137418_11019629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → unclassified Methylocystaceae → Methylocystaceae bacterium	597	Open in IMG/M
3300015242\|Ga0137412_10424287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	1026	Open in IMG/M
3300015262\|Ga0182007_10337525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	562	Open in IMG/M
3300015372\|Ga0132256_100678612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1146	Open in IMG/M
3300015374\|Ga0132255_103891655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	634	Open in IMG/M
3300018431\|Ga0066655_10299899	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300018433\|Ga0066667_10258602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1325	Open in IMG/M
3300018433\|Ga0066667_11347132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	625	Open in IMG/M
3300018433\|Ga0066667_11832770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	550	Open in IMG/M
3300018468\|Ga0066662_10351218	All Organisms → cellular organisms → Bacteria → Proteobacteria	1268	Open in IMG/M
3300018468\|Ga0066662_10780882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	924	Open in IMG/M
3300018468\|Ga0066662_11519518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	697	Open in IMG/M
3300018482\|Ga0066669_10116189	All Organisms → cellular organisms → Bacteria → Proteobacteria	1895	Open in IMG/M
3300018482\|Ga0066669_10651041	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300019888\|Ga0193751_1038392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2168	Open in IMG/M
3300020006\|Ga0193735_1106550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	776	Open in IMG/M
3300021384\|Ga0213876_10723464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	529	Open in IMG/M
3300021445\|Ga0182009_10229552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	914	Open in IMG/M
3300021560\|Ga0126371_12994925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	572	Open in IMG/M
3300022557\|Ga0212123_10000104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	284854	Open in IMG/M
3300022726\|Ga0242654_10203532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	689	Open in IMG/M
3300022756\|Ga0222622_10338829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1045	Open in IMG/M
3300025906\|Ga0207699_10175990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1435	Open in IMG/M
3300025910\|Ga0207684_10062621	Not Available	3159	Open in IMG/M
3300025910\|Ga0207684_10878868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	754	Open in IMG/M
3300025915\|Ga0207693_10156566	All Organisms → cellular organisms → Bacteria	1792	Open in IMG/M
3300025915\|Ga0207693_10376589	All Organisms → cellular organisms → Bacteria → Proteobacteria	1110	Open in IMG/M
3300025915\|Ga0207693_10706165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	781	Open in IMG/M
3300025922\|Ga0207646_10039665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4237	Open in IMG/M
3300026306\|Ga0209468_1124500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	757	Open in IMG/M
3300026312\|Ga0209153_1266622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	548	Open in IMG/M
3300026314\|Ga0209268_1075599	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300026316\|Ga0209155_1001902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	9700	Open in IMG/M
3300026322\|Ga0209687_1124502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	829	Open in IMG/M
3300026330\|Ga0209473_1044227	All Organisms → cellular organisms → Bacteria → Proteobacteria	1964	Open in IMG/M
3300026490\|Ga0257153_1004305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2778	Open in IMG/M
3300026530\|Ga0209807_1061549	All Organisms → cellular organisms → Bacteria → Proteobacteria	1701	Open in IMG/M
3300026530\|Ga0209807_1130583	All Organisms → cellular organisms → Bacteria → Proteobacteria	1001	Open in IMG/M
3300026557\|Ga0179587_11041847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	539	Open in IMG/M
3300027181\|Ga0208997_1064019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300027381\|Ga0208983_1048719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	820	Open in IMG/M
3300027512\|Ga0209179_1031304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	1091	Open in IMG/M
3300027738\|Ga0208989_10030764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1857	Open in IMG/M
3300027903\|Ga0209488_10058700	Not Available	2839	Open in IMG/M
3300028047\|Ga0209526_10255203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	1198	Open in IMG/M
3300028536\|Ga0137415_10728945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	803	Open in IMG/M
3300028536\|Ga0137415_10769408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	774	Open in IMG/M
3300028906\|Ga0308309_10589568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_1_20CM_4_65_11	964	Open in IMG/M
3300031754\|Ga0307475_10089952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2379	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.02%
Host-Associated	Host-Associated	6.20%
Engineered	Engineered	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.70%
Plants	Host-Associated → Plants	6.20%
Aquatic	Environmental → Aquatic	2.33%
Solid Waste	Engineered → Solid Waste	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.10%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.33%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.55%
Sediment	Environmental → Aquatic → Sediment	0.78%
Roots	Host-Associated → Plants → Roots	0.78%
Grass	Engineered → Solid Waste → Grass	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.44%
Loam	Environmental → Terrestrial → Soil → Loam	23.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.33%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%
Composting	Engineered → Solid Waste → Grass → Composting	0.78%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	33.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.33%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	26.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.18%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.88%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908009	Soil microbial communities from sample at FACE Site Metagenome WIR_Amb2	Environmental	Open in IMG/M
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIRA_08263920	2124908009	Soil	QYKDEFDRAPDNLSLDACTTLLELYLGRLAGCGFDEFTAMGVLSAIFGLRDRRDPSGRSTKQLNMSAALSRRAERTKTQIPTAA
4ZMR_04036320	2170459017	Switchgrass, Maize And Mischanthus Litter	MDEKLIRMLIQYKDEFDRAPANLSLGACTALVDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESAMPSTAPKQVHMTAALARRTEQAKARIPAAA
INPhiseqgaiiFebDRAFT_1015320151	3300000364	Soil	MDEKLIRMLIQYKDEFDRAPDNLSLGACTALLDRYVDRLAACGFDTLTAMGILSAIFGLRDRRDPSGRSTKQVHMAAALARRMERANAQIPTAA*
JGIcombinedJ26739_1011801022	3300002245	Forest Soil	MDEKLIRMLVQYKDEFDRAPDNLSLDACTTLLELYVGRLAGCGFDEFTAMGVLSAIFGLRDRRDPSGRSTKQLNMAAALSRRAERTKTQIPTAA*
Ga0066672_102656691	3300005167	Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIDRLGSSGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0066673_101681702	3300005175	Soil	MDEKLIRMLIQYKDEFDCAPDNLSLGACAALLDLYIHRLAGCGFDELTAIGILSAIFGLRDRRDQSDRPTKQLHMTAALARRTAQIPAAA*
Ga0066679_100038417	3300005176	Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0066690_101070145	3300005177	Soil	TGFGGNRIMDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLGSSGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0066690_104363111	3300005177	Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESSIPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0066688_104409382	3300005178	Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESSIPSTASKQVHMTAALARRTERANAKIPAAA*
Ga0066684_101182411	3300005179	Soil	AAVRDDTGFGGNRFMDEKLIRMLIQYKDEFDCAPDNLSLGACAALLDLYIHRLAGCGFDELTAIGILSAIFGLRDRRDQSDRPTKQLHMTAALARRTAQIPAAA*
Ga0066684_103767931	3300005179	Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAASGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0066671_108626611	3300005184	Soil	IMDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESSIPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0066675_100662471	3300005187	Soil	EFDRAPANLSLGACTALLDLYIGRLGSSGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0066675_105322311	3300005187	Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALVDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESSIPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0066675_113734982	3300005187	Soil	MDEKLIRMLVQYKDEFDRAPDNLSLSACAALVDLYGDRLAGCGFDALTAMGILSAIFGLRDRRDPSGRSAKQVHMAAALARRTAQIPAAA*
Ga0066388_1033228302	3300005332	Tropical Forest Soil	MDEKLIRMLIQYKDEFDRAPANLSVGACAALLDLYIHRLAGWGFDESSAIGILSAIYGLRDSSESPGTLKQLHMAAALARRTERLERVKPPVPAAA*
Ga0070709_100845452	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDEKLIRMLIQYKDEFDRAPANLSLGACTALVDLYIGRLAAGGFDELSAIGILSAIFGLRDRRESAMPSTAPKQVHMTAALARRTEQAKARIPAAA*
Ga0070714_1000693164	3300005435	Agricultural Soil	MDEKLIRMLVQYKDEFDRAPANLSLGACTALVDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESAMPSTAPKQVHMTAALARRTEQAKARIPAAA*
Ga0070714_1000942953	3300005435	Agricultural Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALVDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESAMPSTAPKQVHMTAALARRTEQAKARIPAAA*
Ga0070713_1000327296	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MDEKLIRMLIQYKDEFDRAPANLSLGACTALVDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESAMSSTAPKQVHMTAALARRTEQAKARIPAAA*
Ga0070713_1008665132	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MDEKLIRMLVQYKDEFDRAPDNLSLDACTTLLELYVGRLAGCGFDEFTAMGVLSAIFGVRDRRDPSDRSTKQLNMSAALSRRAERTKTQIPTAA*
Ga0070711_1010125112	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MDEKLIRMLVQYKDEFDRAPDNLSLDACTTLLELYVGRLAGCGFDEFTAMGVLSAIFGIRDRRDPSGRSTKQLNMAAALSRRAERTKTQIPTAA*
Ga0070708_1006307912	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNDKLLGMLIEYKDEFDRAPDNLSLGACTALVALYIHRLVGCGIDEPTAIGVLSEIYGLRDRRDSPGSAMTAKQLHMTVALARRAEPPKPQIPAAA*
Ga0070708_1019390402	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDEKLIRMLIQYKDEFDRAPENLSVGACTALLDLYVGRLAACGFDEFTAFGILSAIFGLRDRRDPTDRPTKQVHMAAALARRTAQIPTAA*
Ga0066682_107153412	3300005450	Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLGSSGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0066681_101608962	3300005451	Soil	MDEKLIRMLVQYKDEFDRAPDNLSLSACAALVDLYGDRLAGCGFDALTAMGILSAIFGLRDRRDPSGRSAKQVHMAVALARRTELANAQVPAAA*
Ga0066687_105285032	3300005454	Soil	MDEKLIRMLVQYKDEFDRAPDNLSLSACAALVDLYGDRLAGCGFDDLTAMGILSAIFGLRDRRDPSGRSAKQVHMAVALARRTERANAQVPAAA*
Ga0070706_1007818722	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MDEKLIRMLIQYKDEFDRAPDNLSLGACTALLDRYVDRLAACGFDTLTAMGILSAIFGLRDRRDPSGRSTKQVHMAAALARRTERANAQIPTAA*
Ga0070698_1008033882	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MDEKLIRMLIQYKDEFDRAPDNLSLGACTALLDRYVDRLAACGFDALTAMGILSAIFGLRDRRDPSGRSTKQMHMAAALARRTERANAQVPTAA*
Ga0070695_1019047182	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MDEKLIRMLIQYKDEFDRAPDNLSIGACTALLDLYVGRLAGCGFDELTAMGILSAIFGLRDRRDASDRATKQLHMAAALARRTAQ
Ga0066661_100030772	3300005554	Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESAIPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0066704_104820293	3300005557	Soil	MDEKLIRMLVQYKDEFDRAPDNLSLGACTTLLDLYGDRLAGCGFDELTAMGILSAIFGLRDRRDPSGRSAKQVHMAAALARRTAQIPAAA*
Ga0066670_100946361	3300005560	Soil	YKDEFDRAPANLSLGACTALLDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESSIPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0066670_106134261	3300005560	Soil	MDEKLIRMLVQYKDEFDRAPDNLSLDACAALLDLYVGRLAPCGFDEFTAMGVLSAIFGLRDRRDPSGRSAKQVHMAVALARRTERANAQVPAAA*
Ga0066670_106336502	3300005560	Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALVDLYIGRLAAGGFDELSAIGILSAIFGLRDRRESAMPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0068855_1025766102	3300005563	Corn Rhizosphere	MGFGGNRTMDEKLIRMLIQYKDEFDRAPDNLSLAACTALLDRYVDRLAANGFDELTALGILSAIFGLRDRRDPSGRSMTQLHMAAALARRTEH
Ga0066705_104536601	3300005569	Soil	DRAPANLSLGACTALLDLYIGRLAASGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0066654_100734482	3300005587	Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAAIARRTERANAKIPAAA*
Ga0066903_1028454842	3300005764	Tropical Forest Soil	MDEKLIRMLIQYKDEFDRAPANLSVGACAALLDLYIHRLAGWGFDESSAIGILSAIYGLRESSGEPASLKQLHMAAALARRTERIKPPVPAAA*
Ga0068863_1011343381	3300005841	Switchgrass Rhizosphere	MDEKLIRMLIQYKDEFDRAPANLSLGACTALVDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESAMSSTAPKQVHMTAALARRTE
Ga0066651_100692635	3300006031	Soil	NRIMDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0066651_102613121	3300006031	Soil	NRIMDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAASGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0066696_107054902	3300006032	Soil	MDEKLIRMLVQYKDEFDRAPDNLSLSACAALVDLYGDRLAGCGFDALTAMGILSAIFGLRDRRDASGRSAKQVHMAVALARRMELSNAQVPAAA*
Ga0066652_1009351331	3300006046	Soil	MDEKIIRMLVQYKDEFDRAPDNLSLSACAALVDLYGDRLAGCGFDALTAMGILSAIFGLRDRRDPSGRSAKQVHMAAALARRMELANAQVPAAA*
Ga0070712_1012188972	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDEKLIRMLVQYKDEFDRAPDNLSLDACTTLLELYVGRLAGCGFDEFTAMGVLFAIFGLRDRRDSSDRSTKQLNMSAALARRAERTKTQIPTAA*
Ga0070765_1007277152	3300006176	Soil	EGDRAMNEKLIRMLIQYKDEFDRAPDNLSLGACTALLDLYIGRLTGCDIDEFGAIGILSAIYGLHDRRDPNRHSTKQLHMAVALARRAEHANAQIPAAA*
Ga0079222_100725962	3300006755	Agricultural Soil	MDEKLIRMLIQYKDEFDRAPENLSVGACAALLDLYIHRLAGWGFDESSAIGVLSAIYGLRASGEAPGTLKQLHMAAALARRTERIKPPVPAAA*
Ga0066653_100455781	3300006791	Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAASGFDELSAIGILSAIFGLRDRRESAIPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0075425_1014312481	3300006854	Populus Rhizosphere	MDEKLIRMLIQYKDEFDRAPANLSLGACTALVDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESAMPSTAPKQVHMTAALARRTE
Ga0073928_10000249132	3300006893	Iron-Sulfur Acid Spring	MDEKLIRMLIQYKDEFDRAPDNLSVGACGALLDLYMHRLAGWGFDEPATMGVLSAIFGIRESAGQPATLKQLHMTAALTRRTERAKPQVPAAA*
Ga0079219_108613022	3300006954	Agricultural Soil	MDEKLIRMLIQYKDEFDRAPDNLSLGACVALLDLYIHRLAGCGFDELTAIGILSAIFGLRDRRDRSDRPTKQLHMAAALARRTAQIPAAA*
Ga0099795_100544903	3300007788	Vadose Zone Soil	IRMLIQYKDEFDRAPNNLSLVACTALLDLYVGRLAACGFDESTAMGILSAIFGLRDRRDPSGRSTKQVHMAAALARRTEHANAKVPAAA*
Ga0099795_101322041	3300007788	Vadose Zone Soil	MDEKLIRMLIQYKDQFHRAPANLSLGACTALLDLYIGRLAGNGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0099792_105347771	3300009143	Vadose Zone Soil	KLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAGNGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0099796_101569552	3300010159	Vadose Zone Soil	MDEKLIRMLIQYKDEFDRAPDNLSLVACTALLDLYVGRLAACGFDESTAMGILSAIFGLRDRRDPSGRSTKQVHMAAALARRTEHANAKVPAAA*
Ga0134109_100469752	3300010320	Grasslands Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLGSSGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAAPARRPARANAKIHAAA*
Ga0134065_102130472	3300010326	Grasslands Soil	MDEKLIRMLVQYKDEFDRAPDNLSLDACTALLDLYGDRLAGCGFDALTAMGILSAIFGLRDRRDPSGRSAKQVHMTVALARRTELANAQVPAAA*
Ga0134066_100902832	3300010364	Grasslands Soil	MDEKLIRMLVQYKDEFDRAPDNLSLDACTALLDLYGDRLAGCGFDALTAMGILSAIFGLRDRRDPSGRSAKQVHMAVALARRTELANAQVP
Ga0126383_131543831	3300010398	Tropical Forest Soil	KLIRMLIQYKDEFDRAPANLSVGACAALLDLYIHRLAGWGFDESSAIGILSAIYGLRESSGEPASLKQLHMAAALARRTERIKPPVPAAA*
Ga0105246_108850791	3300011119	Miscanthus Rhizosphere	IQYKDEFDRAPANLSLGACTALVDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESAMSSTAPKQVHMTAALARRTEQAKARIPAAA*
Ga0137364_100953064	3300012198	Vadose Zone Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLGSSGFDELSAIGIPSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0137364_103220502	3300012198	Vadose Zone Soil	MDEKLIRMLVQYKDEFDRAPDNLSLSACAALVDLYGDRLAGCGFDALTAMGILSAIFGLRDRRDPSGRSAKQVHMTVALARRTELANAQVPAAA*
Ga0137364_113923452	3300012198	Vadose Zone Soil	YKDEFDRAPANLSLGACTALLDLYIGRLAASGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0137383_102256622	3300012199	Vadose Zone Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAASGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTKRANAKIPAAA*
Ga0137382_102391951	3300012200	Vadose Zone Soil	MDEKLIRMLVQYKDEFDRAPDNLSLSACTALVDLYGDRLAGCGFDALTAMGILSAIFGLRDRRDPSGRSTKQVHMAAALDRRAEPRKP
Ga0137399_102106252	3300012203	Vadose Zone Soil	MDEKLIRMLIQYKDEFDRAPDNLSLVACTALLDLYLGRLAACGFDESTAMGILSAIFGLRDRRDPSGRSTKQVHMAAALARRTEHANAKVPAAA*
Ga0137376_112686132	3300012208	Vadose Zone Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAASGFDEPSAIGILSAIFGLRDRRESSMPSTAPKQVHM
Ga0137370_108651771	3300012285	Vadose Zone Soil	AAVLEQTGFGGNRIMDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAASGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0137358_102819202	3300012582	Vadose Zone Soil	MDEKLIRMLVQYKDEFDRAPDNLSLVACTALLDLYVGRLAACGFDESTAMGILSAIFGLRDRRDPSGRSTKQVHMAAALARRTEQANAKVPAAA*
Ga0137396_104292101	3300012918	Vadose Zone Soil	MDEKLIRMLVQYKDEFDRAPDNLSLSACTALVDLYGDRLAGCGFDALTAMGILSAIFGLRDRRDPSGRSTKQVHMAAALARRTEQANAKVPAAA*
Ga0137394_116021342	3300012922	Vadose Zone Soil	MDEKLIRMLIQYKDEFDRAPDNLSLVACTALLDLYVGRLAACGFDESTAMGILSAIFGLRDRRDPSGRSTKQVHMAAALDRRAERGNA
Ga0137359_117785741	3300012923	Vadose Zone Soil	VLKKTGFGGNRIMDEKLIRMLIQYKDEFDPAPANLSLGACTALLDLYIGRLAASGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0137413_110509932	3300012924	Vadose Zone Soil	MDEKLIRMLIQYKDEFDRAPDNLSLVACTALLDLYLGRLAACGFDESTAMGILSAIFGLRDRRDPSGRSTKQVHMAAALDRRAEPRKPQIPAAA*
Ga0137419_110764472	3300012925	Vadose Zone Soil	MDEKLIRMLIQYKDEFDRAPDNLSLVACTALLDLYVGRLAACGFDESTAMGILSAIFGLRDRRDPSGRSTKQVHMAAALARRTEQANAKVPAAA*
Ga0164301_101675642	3300012960	Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLGSSDFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA*
Ga0164306_110104532	3300012988	Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLGSSGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTAQIPAAA*
Ga0134081_100653381	3300014150	Grasslands Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDHYIGRLGSSGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANSKIPAAA*
Ga0134079_102726891	3300014166	Grasslands Soil	MDEKLIRMLVQYKDEFDRAPDNLSLSACAALVDLYGDRLAGCGFDALTAMGILSAIFGLRDRRDPSGRSAKQVHMAAALARRTEHANAQIPTAA*
Ga0137418_100987353	3300015241	Vadose Zone Soil	MDEKLIRMLIQYKDEFDRAPDNLSLDACTALLDLYVGRLAACGFDESTAMGILSAIFGLRDRRDPSGRSTKQVHMAAALARRTEQANAKVPAAA*
Ga0137418_110196291	3300015241	Vadose Zone Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAASGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTA
Ga0137412_104242872	3300015242	Vadose Zone Soil	MDEKLIRMLIQYKDEFDRAPDNLSLVACTALLDLYLGRLAACGFDESTAMGILSAIFGLRDRRDPSGRSTKQVHMAAALARRTEQANAKVPAAA*
Ga0182007_103375252	3300015262	Rhizosphere	PAAAPAAVLEQTGFGGNRIMDEKLIRMLVQYKDEFDRAPANLSLGACTALVDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESAMPSTAPKQVHMTAALARRTEQAKARIPAAA*
Ga0132256_1006786122	3300015372	Arabidopsis Rhizosphere	MDEKLIRMLIQYKDEFDRAPNNLSLNACTALLDLYVHRLTGCGFDELTAMGILSAIFGLRDRRDPSDRSTKQVHMAAALARRSAQIPAAA*
Ga0132255_1038916551	3300015374	Arabidopsis Rhizosphere	MDEKLIRMLIQYKDEFDRAPNNLSLDACTALLDLYVHRLTGCGFDELTAMGILSAIFGLRDRRDPSDRSTKQVHMAAALARRSAQIPAAA*
Ga0066655_102998991	3300018431	Grasslands Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESSIPSTAPKQVHMTAALARRTERANAKIPAAA
Ga0066667_102586021	3300018433	Grasslands Soil	LIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESSIPSTAPKQVHMTAALARRTERANAKIPAAA
Ga0066667_113471322	3300018433	Grasslands Soil	VRDGYEGDSVMDEKLIRMLVQYKDEFDRAPDNLSLSACTALVDLYGDRLAGCGFDALTAMGILSAIFGLRDRRDPSGRSAKQVHMAAALARRTAQIPAAA
Ga0066667_118327702	3300018433	Grasslands Soil	MDEKLIRMLIQYKDEFDCAPDNLSLGACAALLDLYIHRLAGCGFDELTAIGILSAIFGLRDRRDQSDRPTKQLHMTAALARRTAQIPAAA
Ga0066662_103512181	3300018468	Grasslands Soil	YKDEFDRAPANLSLGACTALLDLYIGRLAASGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA
Ga0066662_107808822	3300018468	Grasslands Soil	MDEKLIRMLVQYKDEFDRAPDNLSLDACTALLDLYGGRLAGCGFDALTAMGILSAIFGLRDRRDASDRSAKQVHMAVALARRMELANAQVPAAA
Ga0066662_115195182	3300018468	Grasslands Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALVDLYIGRLGSGGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAAIARRTERANAKIPAAA
Ga0066669_101161894	3300018482	Grasslands Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLGSSGFDELSAIGILSAIFGLRDHRESSMPSTAPKQVHMTAALARRTERANAKIPAAA
Ga0066669_106510411	3300018482	Grasslands Soil	RAPDNLSLDACTALLDLYGGRLAGCGFDALTAMGILSAIFGLRDRHDASGRSAKQVHMAVALARRMERANAQVPAAA
Ga0193751_10383925	3300019888	Soil	MNEKLIRMLIQYKDEFDRAPDNLSLGACTALLDLYIGRLAGCDIDEFGAIGILSAIYGLHDRRDSSGRTTTAKQLHMTVALSRRAERANAQIPAAA
Ga0193735_11065502	3300020006	Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLGSSGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA
Ga0213876_107234641	3300021384	Plant Roots	MDEKLIRMLIQYKDEFDRAPENLSVGACTALLDLYIHRLGGWGFDEPSAMGILSAIFGLRDSTGAPASLKQLHMTAALARRTERRK
Ga0182009_102295521	3300021445	Soil	GFGGNRIMDEKLIRMLIQYKDEFDRAPANLSLGACTALVDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESAMPSTAPKQVHMTAALARRTEQAKARIPAAA
Ga0126371_129949251	3300021560	Tropical Forest Soil	DRAPANLSVGACAALLDLYIHRLAGWGFDESSAIGILSAIYGLRESSGEPASLKQLHMAAALARRTERIKPPVPAAA
Ga0212123_10000104229	3300022557	Iron-Sulfur Acid Spring	MDEKLIRMLIQYKDEFDRAPDNLSVGACGALLDLYMHRLAGWGFDEPATMGVLSAIFGIRESAGQPATLKQLHMTAALTRRTERAKPQVPAAA
Ga0242654_102035322	3300022726	Soil	MDEKLIRMLVQYKDEFDRAPDNLSLDACTTLLELYVGRLAGCGFDEFTAMGVLSAIFGLRDRRDPSDRSTKQLNMSAALSRRAERTK
Ga0222622_103388292	3300022756	Groundwater Sediment	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAASGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA
Ga0207699_101759901	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	IRMLIQYKDEFDRAPANLSLGACTALVDLYIGRLAAGGFDELSAIGILSAIFGLRDRRESAMPSTAPKQVHMTAALARRTEQAKARIPAAA
Ga0207684_100626213	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNDKLLGMLIEYKDEFDRAPDNLSLGACTALVALYIHRLVGCGIDEPTAIGVLSEIYGLRDRRDSPGSAMTAKQLHMTVALARRAEPPKPQIPAAA
Ga0207684_108788682	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MDEKLIRMLIQYKDEFDRAPDNLSLGACTALLDRYVDRLAACGFDTLTAMGILSAIFGLRDRRDPSGRSTKQVHMAAALARRTERANAQIPTAA
Ga0207693_101565662	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MDEKLIRMLIQYKDEFDRAPANLSLGACTALVDLYIGRLAAGGFDELSAIGILSAIFGLRDRRESAMPSTAPKQVHMTAALARRTERANAKIPAAA
Ga0207693_103765892	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MDEKLIRMLIQYKDEFDRAPANLSLGACTALVDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA
Ga0207693_107061651	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MDEKLIRMLVQYKDEFDRAPDNLSLDACTTLLELYVGRLAGCGFDEFTAMGVLSAIFGIRDRRDPSGRSTKQLNMAAALSRRAERTSGA
Ga0207646_100396655	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MDEKLIRMLIQYKDEFDRAPENLSVGACTALLDLYVGRLAACGFDEFTAFGILSAIFGLRDRRDPTDRPTKQVHMAAALARRTAQIPTAA
Ga0209468_11245002	3300026306	Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAAIARRTERANAKIPAAA
Ga0209153_12666222	3300026312	Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESSIPSTAPKQVHMTAALARRTERANAKI
Ga0209268_10755991	3300026314	Soil	RAPANLSLGACTALLDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA
Ga0209155_10019027	3300026316	Soil	MDEKLIRMLIQYKDEFDRAPANLSLGACTALLDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA
Ga0209687_11245021	3300026322	Soil	FDRAPANLSLGACTALLDLYIGRLAGSGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA
Ga0209473_10442271	3300026330	Soil	EFDCAPDNLSLGACAALLDLYIHRLAGCGFDELTAIGILSAIFGLRDRRDQSDRPTKQLHMTAALARRTAQIPAAA
Ga0257153_10043051	3300026490	Soil	DRTMDEKLIRMLVQYKDEFDRAPDNLSLDACTTLLELYVGRLAGCGFDEFTAMGILSAIFGLRDRRDPSGRSTKQLNMATALSRRAERAKTQIPTAA
Ga0209807_10615491	3300026530	Soil	DRAPANLSLGACTALLDLYIGRLAASGFDELSAIGILSAIFGLRDRRESSMPSTAPKQVHMTAALARRTERANAKIPAAA
Ga0209807_11305833	3300026530	Soil	YKDEFDCAPDNLSLGACAALLDLYIHRLAGCGFDELTAIGILSAIFGLRDRRDQSDRPTKQLHMTAALARRTAQIPAAA
Ga0179587_110418472	3300026557	Vadose Zone Soil	MDEKLIRMLIQYKDEFDRAPDNLSLVACTALLDLYVGRLAACGFDESTAMGILSAIFGLRDRRDPSGRSTKQVHMAAALDRRAE
Ga0208997_10640191	3300027181	Forest Soil	MDEKLIRMLIQYKDEFDRAPDNLSLVACTALLDLYVGRLAACGFDESTAMGILSAIFGLRDRRDPSGRSTKQVHMA
Ga0208983_10487192	3300027381	Forest Soil	MDEKLIRMLIQYKDEFDRAPDNLSLVACTALLDLYVGRLAACGFDESTAMGILSAIFGLRDRRDPSGRSTKQVHMAAALARRTEQANAKVPAAA
Ga0209179_10313042	3300027512	Vadose Zone Soil	MDEKLIRMLIQYKDEFDRAPDNLSLVACTALLDLYVGRLAACGFDESTAMGILSAIFGLRDRRDPSGRSTKQVHMAAALARRTEHANAKVPAAA
Ga0208989_100307642	3300027738	Forest Soil	MDEKLIRMLIQYKDEFDRAPDNLSLVACTALLDLYVGRLAACGFDESTAMGILSAIFGLRDRRDPSGRSTKQVHMAAALARRTEHANAQVPAAA
Ga0209488_100587001	3300027903	Vadose Zone Soil	MRHLRRHQRLFLSGFGGNHTMDEKLIRMLIQYKDEFDRAPDNLSLVACTALLDLYVGRLAACGFDESTAMGILSAIFGLRDRRDPSGRSTKQVHMAAALARRTEQANAKVPAAA
Ga0209526_102552031	3300028047	Forest Soil	MDEKLIRMLVQYKDEFDRAPDNLSLDACTTLLELYVGRLAGCGFDEFTAMGVLSAIFGLRDRRDPSGRSTKQLNMAAALSRRAERTKTQIPTAA
Ga0137415_107289452	3300028536	Vadose Zone Soil	MDEKLIRMLIQYKDEFDRAPDNLSLVACTALLDLYVGRLAACGFDESTAMGILSAIFGLRDRRDPSGRSTKQVHMAAALARRTERADAQIPAAA
Ga0137415_107694081	3300028536	Vadose Zone Soil	AAAPAVVRDGYEGDSMMDEKLIRMLVQYKDEFDRAPDNLSLSACTALVDLYGDRLAGCGFDALTAMGILSAIFGLRDRRDPSGRSAKQVHMAVALARRTELANAQVPAAA
Ga0308309_105895682	3300028906	Soil	MNEKLIRMLIQYKDEFDRAPDNLSLGACTALLDLYIGRLTGCDIDEFGAIGILSAIYGLHDRRDPNRHSTKQLHMAVALARRAEHANAQIPAAA
Ga0307475_100899522	3300031754	Hardwood Forest Soil	MNEKLIRMLIQYKDEFDRAPDNLSLGACTALLDLYIGRLTGCDIDEFGAIGILSAIYGLHDRRDPSGHSTKQLHMAVALSRRAEHANAQIPAAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063904

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences