Metagenome / Metatranscriptome Family F063896

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063896
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	100 residues
Representative Sequence	MNGPAPADRNKPGEAPRTERLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSTTEVEYEVEAELDGEPLTLHFHPRCHDAWKTESEAVLEQARAQAAP
Number of Associated Samples	102
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.09 %
% of genes near scaffold ends (potentially truncated)	43.41 %
% of genes from short scaffolds (< 2000 bps)	82.95 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.318 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.155 % of family members)
Environment Ontology (ENVO)	Unclassified (23.256 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.860 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.43% β-sheet: 21.43% Coil/Unstructured: 57.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF12680	SnoaL_2	31.78
PF07859	Abhydrolase_3	3.88
PF13185	GAF_2	2.33
PF00672	HAMP	1.55
PF04204	HTS	1.55
PF00282	Pyridoxal_deC	1.55
PF01594	AI-2E_transport	0.78
PF13650	Asp_protease_2	0.78
PF08028	Acyl-CoA_dh_2	0.78
PF00587	tRNA-synt_2b	0.78
PF02518	HATPase_c	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	3.88
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	1.55
COG1897	Homoserine O-succinyltransferase	Amino acid transport and metabolism [E]	1.55
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.78
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.09 %
Unclassified	root	N/A	27.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.09 %
Unclassified	root	N/A	27.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.32 %
Unclassified	root	N/A	27.91 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.78 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	56.59 %
Unclassified	root	N/A	27.91 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	14.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.43 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.33 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	14.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.43 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.78 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	14.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.33 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	14.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.33 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	14.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.33 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	14.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.33 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	14.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.33 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	14.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.33 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	14.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.33 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	14.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.33 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	14.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.33 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	14.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.33 %
Caryophyllales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	14.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.33 %
Amaranthaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Amaranthaceae	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	14.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.33 %
Bosea	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Amaranthaceae → Bosea	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZRSKLJ02H1GE7	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	522	Open in IMG/M
3300004092\|Ga0062389_100132586	All Organisms → cellular organisms → Bacteria	2301	Open in IMG/M
3300004092\|Ga0062389_100249560	All Organisms → cellular organisms → Bacteria → Proteobacteria	1799	Open in IMG/M
3300004635\|Ga0062388_101123334	All Organisms → cellular organisms → Bacteria → Proteobacteria	773	Open in IMG/M
3300005260\|Ga0074072_1002715	All Organisms → cellular organisms → Bacteria	10048	Open in IMG/M
3300005329\|Ga0070683_100090144	All Organisms → cellular organisms → Bacteria	2878	Open in IMG/M
3300005329\|Ga0070683_100814951	Not Available	895	Open in IMG/M
3300005436\|Ga0070713_100025212	All Organisms → cellular organisms → Bacteria	4646	Open in IMG/M
3300005437\|Ga0070710_10252532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1134	Open in IMG/M
3300005439\|Ga0070711_101302974	Not Available	630	Open in IMG/M
3300005458\|Ga0070681_12040497	Not Available	502	Open in IMG/M
3300005529\|Ga0070741_10057557	All Organisms → cellular organisms → Bacteria	4584	Open in IMG/M
3300005529\|Ga0070741_10071240	All Organisms → cellular organisms → Bacteria	3916	Open in IMG/M
3300005537\|Ga0070730_10576130	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300005541\|Ga0070733_10852000	Not Available	612	Open in IMG/M
3300005548\|Ga0070665_100011221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9059	Open in IMG/M
3300005557\|Ga0066704_10474344	All Organisms → cellular organisms → Bacteria → Proteobacteria	826	Open in IMG/M
3300005563\|Ga0068855_100018809	All Organisms → cellular organisms → Bacteria	8303	Open in IMG/M
3300005602\|Ga0070762_11185769	Not Available	528	Open in IMG/M
3300005614\|Ga0068856_102088570	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	576	Open in IMG/M
3300005616\|Ga0068852_100917448	Not Available	893	Open in IMG/M
3300005616\|Ga0068852_101100345	All Organisms → cellular organisms → Bacteria → Proteobacteria	815	Open in IMG/M
3300005616\|Ga0068852_102734456	Not Available	512	Open in IMG/M
3300005617\|Ga0068859_102930827	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	522	Open in IMG/M
3300005712\|Ga0070764_10097684	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300006028\|Ga0070717_11321947	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300006175\|Ga0070712_101913911	Not Available	519	Open in IMG/M
3300009093\|Ga0105240_11003796	All Organisms → cellular organisms → Bacteria → Proteobacteria	892	Open in IMG/M
3300009098\|Ga0105245_12962437	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	526	Open in IMG/M
3300009545\|Ga0105237_10058905	All Organisms → cellular organisms → Bacteria → Proteobacteria	3844	Open in IMG/M
3300009545\|Ga0105237_10122935	All Organisms → cellular organisms → Bacteria	2590	Open in IMG/M
3300009545\|Ga0105237_12608780	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	516	Open in IMG/M
3300009551\|Ga0105238_10573446	Not Available	1134	Open in IMG/M
3300009551\|Ga0105238_12268737	Not Available	578	Open in IMG/M
3300010371\|Ga0134125_10157730	All Organisms → cellular organisms → Bacteria	2528	Open in IMG/M
3300010371\|Ga0134125_13057127	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	507	Open in IMG/M
3300010373\|Ga0134128_12292287	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	595	Open in IMG/M
3300010376\|Ga0126381_103591012	Not Available	608	Open in IMG/M
3300010396\|Ga0134126_10001167	All Organisms → cellular organisms → Bacteria → Proteobacteria	33296	Open in IMG/M
3300010396\|Ga0134126_12482751	Not Available	564	Open in IMG/M
3300011120\|Ga0150983_11267195	Not Available	1013	Open in IMG/M
3300011120\|Ga0150983_14698296	All Organisms → cellular organisms → Bacteria → Proteobacteria	808	Open in IMG/M
3300012982\|Ga0168317_1028658	All Organisms → cellular organisms → Bacteria → Proteobacteria	1542	Open in IMG/M
3300013104\|Ga0157370_10567509	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300013105\|Ga0157369_10877690	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	920	Open in IMG/M
3300013296\|Ga0157374_10764750	Not Available	981	Open in IMG/M
3300014168\|Ga0181534_10374260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	783	Open in IMG/M
3300014325\|Ga0163163_10438280	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300014969\|Ga0157376_10568451	Not Available	1124	Open in IMG/M
3300018044\|Ga0187890_10511200	Not Available	676	Open in IMG/M
3300018088\|Ga0187771_10186395	All Organisms → cellular organisms → Bacteria → Proteobacteria	1718	Open in IMG/M
3300019242\|Ga0181502_1233514	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	638	Open in IMG/M
3300019260\|Ga0181506_1366023	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300020579\|Ga0210407_10825042	Not Available	714	Open in IMG/M
3300020580\|Ga0210403_10192793	All Organisms → cellular organisms → Bacteria → Proteobacteria	1672	Open in IMG/M
3300021086\|Ga0179596_10047283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1765	Open in IMG/M
3300021168\|Ga0210406_10058371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3354	Open in IMG/M
3300021170\|Ga0210400_10664575	Not Available	858	Open in IMG/M
3300021180\|Ga0210396_10645045	Not Available	918	Open in IMG/M
3300021181\|Ga0210388_10014057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6410	Open in IMG/M
3300021403\|Ga0210397_10495407	All Organisms → cellular organisms → Bacteria → Proteobacteria	925	Open in IMG/M
3300021404\|Ga0210389_10410255	All Organisms → cellular organisms → Bacteria → Proteobacteria	1065	Open in IMG/M
3300021405\|Ga0210387_10867027	All Organisms → cellular organisms → Bacteria → Proteobacteria	796	Open in IMG/M
3300021406\|Ga0210386_10540150	All Organisms → cellular organisms → Bacteria → Proteobacteria	1008	Open in IMG/M
3300021420\|Ga0210394_11748468	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	520	Open in IMG/M
3300021432\|Ga0210384_11035370	Not Available	723	Open in IMG/M
3300021475\|Ga0210392_10420723	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	976	Open in IMG/M
3300021475\|Ga0210392_10997818	Not Available	627	Open in IMG/M
3300021477\|Ga0210398_10183736	All Organisms → cellular organisms → Bacteria → Proteobacteria	1704	Open in IMG/M
3300021479\|Ga0210410_11730163	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300021559\|Ga0210409_10314702	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Amaranthaceae → Bosea	1410	Open in IMG/M
3300021559\|Ga0210409_11730007	Not Available	502	Open in IMG/M
3300022529\|Ga0242668_1145484	All Organisms → cellular organisms → Bacteria → Proteobacteria	518	Open in IMG/M
3300022726\|Ga0242654_10170424	Not Available	740	Open in IMG/M
3300024288\|Ga0179589_10409075	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	622	Open in IMG/M
3300025906\|Ga0207699_11176199	Not Available	568	Open in IMG/M
3300025912\|Ga0207707_10032466	All Organisms → cellular organisms → Bacteria	4570	Open in IMG/M
3300025913\|Ga0207695_10197158	All Organisms → cellular organisms → Bacteria	1929	Open in IMG/M
3300025913\|Ga0207695_10313739	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1458	Open in IMG/M
3300025913\|Ga0207695_10814941	Not Available	814	Open in IMG/M
3300025920\|Ga0207649_11291086	Not Available	577	Open in IMG/M
3300025928\|Ga0207700_10020872	All Organisms → cellular organisms → Bacteria	4460	Open in IMG/M
3300025928\|Ga0207700_11491549	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	600	Open in IMG/M
3300026142\|Ga0207698_10714917	Not Available	998	Open in IMG/M
3300027067\|Ga0208602_1010717	All Organisms → cellular organisms → Bacteria → Proteobacteria	978	Open in IMG/M
3300027889\|Ga0209380_10818029	All Organisms → cellular organisms → Bacteria → Proteobacteria	527	Open in IMG/M
3300027895\|Ga0209624_10020837	All Organisms → cellular organisms → Bacteria	4152	Open in IMG/M
3300028381\|Ga0268264_10746246	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	975	Open in IMG/M
3300028536\|Ga0137415_10296861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1420	Open in IMG/M
3300028573\|Ga0265334_10027268	All Organisms → cellular organisms → Bacteria → Proteobacteria	2302	Open in IMG/M
3300028573\|Ga0265334_10223183	Not Available	652	Open in IMG/M
3300030007\|Ga0311338_11512656	Not Available	619	Open in IMG/M
3300030520\|Ga0311372_10612434	All Organisms → cellular organisms → Bacteria → Proteobacteria	1552	Open in IMG/M
3300030617\|Ga0311356_10797251	Not Available	897	Open in IMG/M
3300030737\|Ga0302310_10143137	All Organisms → cellular organisms → Bacteria → Proteobacteria	1443	Open in IMG/M
3300030776\|Ga0075396_1946057	All Organisms → cellular organisms → Bacteria → Proteobacteria	681	Open in IMG/M
3300030872\|Ga0265723_1000745	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300030917\|Ga0075382_11670795	All Organisms → cellular organisms → Bacteria → Proteobacteria	580	Open in IMG/M
3300030967\|Ga0075399_11230845	Not Available	609	Open in IMG/M
3300030969\|Ga0075394_10061623	All Organisms → cellular organisms → Bacteria → Proteobacteria	704	Open in IMG/M
3300031047\|Ga0073995_12164849	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300031057\|Ga0170834_101516258	All Organisms → cellular organisms → Bacteria → Proteobacteria	756	Open in IMG/M
3300031057\|Ga0170834_107496662	All Organisms → cellular organisms → Bacteria → Proteobacteria	870	Open in IMG/M
3300031128\|Ga0170823_10791600	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	557	Open in IMG/M
3300031231\|Ga0170824_113735571	All Organisms → cellular organisms → Bacteria → Proteobacteria	805	Open in IMG/M
3300031231\|Ga0170824_114997933	All Organisms → cellular organisms → Bacteria → Proteobacteria	678	Open in IMG/M
3300031247\|Ga0265340_10376292	All Organisms → cellular organisms → Bacteria → Proteobacteria	627	Open in IMG/M
3300031446\|Ga0170820_14671458	Not Available	657	Open in IMG/M
3300031446\|Ga0170820_15522040	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300031474\|Ga0170818_104773480	All Organisms → cellular organisms → Bacteria → Proteobacteria	528	Open in IMG/M
3300031474\|Ga0170818_115159801	Not Available	657	Open in IMG/M
3300031616\|Ga0307508_10430812	All Organisms → cellular organisms → Bacteria → Proteobacteria	911	Open in IMG/M
3300031708\|Ga0310686_102455452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7270	Open in IMG/M
3300031708\|Ga0310686_105563202	All Organisms → cellular organisms → Bacteria → Proteobacteria	1125	Open in IMG/M
3300031708\|Ga0310686_112522772	All Organisms → cellular organisms → Bacteria	2155	Open in IMG/M
3300031708\|Ga0310686_114108743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6292	Open in IMG/M
3300031788\|Ga0302319_11676147	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	556	Open in IMG/M
3300031962\|Ga0307479_10379266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1398	Open in IMG/M
3300031962\|Ga0307479_10550105	All Organisms → cellular organisms → Bacteria → Proteobacteria	1137	Open in IMG/M
3300032160\|Ga0311301_10924344	All Organisms → cellular organisms → Bacteria → Proteobacteria	1170	Open in IMG/M
3300032174\|Ga0307470_11074051	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	646	Open in IMG/M
3300032180\|Ga0307471_100861474	Not Available	1073	Open in IMG/M
3300032515\|Ga0348332_10771163	All Organisms → cellular organisms → Bacteria → Proteobacteria	685	Open in IMG/M
3300032515\|Ga0348332_12276603	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300032515\|Ga0348332_12698348	Not Available	505	Open in IMG/M
3300032896\|Ga0335075_10036757	All Organisms → cellular organisms → Bacteria	6983	Open in IMG/M
3300033513\|Ga0316628_100325655	All Organisms → cellular organisms → Bacteria → Proteobacteria	1922	Open in IMG/M
3300033544\|Ga0316215_1034793	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	526	Open in IMG/M
3300034268\|Ga0372943_0796747	Not Available	626	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.74%
Host-Associated	Host-Associated	23.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.32%
Plants	Host-Associated → Plants	23.26%
Aquatic	Environmental → Aquatic	5.43%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.20%
Freshwater	Environmental → Aquatic → Freshwater	5.43%
Peat	Environmental → Terrestrial → Peat	3.88%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.33%
Roots	Host-Associated → Plants → Roots	2.33%
Geologic	Environmental → Terrestrial → Geologic	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.29%
Loam	Environmental → Terrestrial → Soil → Loam	14.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.20%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.43%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.33%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.55%
Mine	Environmental → Terrestrial → Geologic → Mine	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.20%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.43%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.33%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Unclassified	Environmental → Terrestrial → Geologic → Mine → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.16%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	6.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	6.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.10%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.10%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.33%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.33%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.78%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.78%
Weathered Mine Tailings	Environmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.78%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005260	Microbial communities on the surface of kaolinite enhanced biochar from soil with fertiliser in Sydney, Australia	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012982	Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfield	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019242	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019260	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027067	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF007 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028573	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG	Host-Associated	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030776	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030872	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030917	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033544	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5	Host-Associated	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_01773990	2170459024	Grass Soil	MNGPASADRKNPQEAPRTERLTVTALRRAVSIRLWGGKGCGAPCDFCRVLVSPTEVEYEVEAQLDGQPVTLHFHPRCHEAWKTECETLA
Ga0062389_1001325861	3300004092	Bog Forest Soil	MNGPAPADRIKAEGTTRTERLSVAALRRALSIRLWGGKGCGVPCDFCRVLVSASEVEYEVEAELDGKPLTLHFHPRCHDAWKMESEAASESEEQARKQAIP*
Ga0062389_1002495603	3300004092	Bog Forest Soil	MNGPAPADRNKPGEAPRTERLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSTTEIEYEVEAELDGEPLTLHFHPRCHDAWKMESEAVLEQARAQQAAP*
Ga0062388_1011233341	3300004635	Bog Forest Soil	DCKVIQMNGPAPADRNKPGEAPRTERLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSTTEIEYEVEAELDGEPLTLHFHPRCHDAWKMESEAVLEQARAQQAAP*
Ga0074072_10027153	3300005260	Soil	MNGPASADRKPLEDGSRTERLNVSALRRARSVRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGASVTLHFHPNCHDAWKLESEAPRSDSEPTESQQLQSPAA*
Ga0070683_1000901442	3300005329	Corn Rhizosphere	MNGSASADRNGLDEASRTERLTVATLRRARPVRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGAPVTLHFHPRCHDAWKLEIEAHRSDGETTDAERRHTPAA*
Ga0070683_1008149511	3300005329	Corn Rhizosphere	MNGPASADRKSLDEASRTERLTVAALRRARPIRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGTPLTLHFHPRCHDSWKLEVEAHRSDSEAAQSQRIETPAA
Ga0070713_1000252124	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MNGPASADRNGLDEASRTERLTVAALRRARPIRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGAPLTLHFHPRCHDSWKLEVEAHRSDDEPVPAQRVQNPAA*
Ga0070710_102525322	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MNGPASADRSNPDEAPRTERLSVAALRRARSIRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGAPVTLHFHPRCHDVWKAEIDELAASAPPPSQLSPPAA*
Ga0070711_1013029741	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNGPASADRTEQASKEPRAERLTVAALRRAVPIRLWGGKGCGVPCDFCRVLVSSDEVEYEVEAQLDGARVTLHFHPRCHDTWKAEVENPASGDGQVSHQRSMQTPAA*
Ga0070681_120404971	3300005458	Corn Rhizosphere	RNAAEETPRTERLTVAALRRASPIRLWGGKGCGVPCDFCRVLVSSSEVEYEIEAELDGARLTLHFHPRCHDAWKAEIEALASSDSQVMAQPRIQTGA*
Ga0070741_100575572	3300005529	Surface Soil	MNGSASADRNNFAETPRTERLSVAALRRATPIRLWGGKGCGVPCDFCRVLVSDTEVEYEVDAELDDQRLTLHFHPRCYDIWKTETEMAGAGETTEAAEPPRTKISP*
Ga0070741_100712403	3300005529	Surface Soil	MNGPASDDRFEPPKEAPRAERLTVAALRRATPIRLWGGKGCGVPCDFCRVLVSSNEIEYEVEAQLDGTRVTLHFHPRCHDAWKAEIESSPSSDGTIAHSQSMQTPAA*
Ga0070730_105761301	3300005537	Surface Soil	PSGQLQIWRLQGKPMNGPASADRNDYPETPRTERLTVATLRRATPIRLWGGKGCGVPCDFCRVLVSDTEVEYEVDAQLDDQRLTLHFHPRCYDIWKTESEAAGVTETTEPQRAKASP*
Ga0070733_108520002	3300005541	Surface Soil	MNGSASADRTNTEPADEAPRTARLTVAALRRAVSIRLWGGKGCGVPCDFCRVLVSSSEVEYEVEAELDGERMTLHFHPRCHDAWKAESEAPSAP
Ga0070665_1000112218	3300005548	Switchgrass Rhizosphere	MNGPASADRTADSQAPRTERLTVAELRRATPLRLWGGKGCGVACDFCRVLVSSNEIEYEVEAQLDGARVTLHFHPRCHDAWKIELATGEAQESEQPRIQTPA*
Ga0066704_104743443	3300005557	Soil	VYKMNGPASADRKAPEEAPRSERLTVTALRRAASIRLWGGKGCGAPCDFCRVLVSPTEVEYEVEAQLDGQPLTLHFHPRCHETWKTECETLAAQAVQQGAKNSR*
Ga0068855_1000188091	3300005563	Corn Rhizosphere	MNGPASADRTADSQAPRTERLTVAELRRATPLRLWGGKGCGVACDFCRVLVSSNEIEYEVEAQLDGARVTLHFHPRCHDAWKIELAT
Ga0070762_111857692	3300005602	Soil	MNGPAPADRNKPGEAPRTERLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSTSEIEYEVEAELDGEPLTLHFHPRCHDAWKMESEAVLEQARAQQAAP*
Ga0068856_1020885701	3300005614	Corn Rhizosphere	MNGTASADRNNYPETPRTERLTVAALRRATPIRLWGGKGCGVPCDFCRVLISDTEVEYEVDADLDDQRLTLHFHPRCYDIWKTESEAAGAAEATEAAEPSRAKATP*
Ga0068852_1009174481	3300005616	Corn Rhizosphere	MNGPASADRKTLDEASRTERLNVAALRRARPVRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGASVTLHFHPRCHDAWKLEIEAHTSESGLTESERMPTSAA*
Ga0068852_1011003453	3300005616	Corn Rhizosphere	LDEASRTERLTVATLRRARPVRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGAPVTLHFHPRCHDAWKLEIEAHRSDGETTDAERRHTPAA*
Ga0068852_1027344561	3300005616	Corn Rhizosphere	MNGPASADRTADSQAPRTERLTVAELRRATPLRLWGGKGCGVACDFCRVLVSSNEIEYEVEAQLDGARVTLHFHPRCHDAWKIELATGEAQESEQPRIQTP
Ga0068859_1029308272	3300005617	Switchgrass Rhizosphere	MKGPASADRKTPELVPRTERLTVTELRRVKSVRLWGGKGCGVPCDFCRVLLSDTEVEYEVEAQLDGVPLTLHFHPRCYDAWKAECDSMDENTSGPAAA*
Ga0070764_100976841	3300005712	Soil	MNGPAPADRSKPEDAPRTERLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSTTEVEYEVEAELDGEPLTLHFHPRCHDAWKMESEAVLEQARAQQAAP*
Ga0070717_113219472	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LQGIPMNGPASADRNGLDEASRTERLTVAALRRARPIRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGAPLTLHFHPRCHDSWKLEVEAHRSDDEPVPAQRVQNPAA*
Ga0070712_1019139111	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRMNGPASADRKSLDEASRTERLTVAALRRARPVRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGASVTLHFHPRCHDAWKLEVEAHGSDSESTQPQRIR
Ga0105240_110037963	3300009093	Corn Rhizosphere	MNGSASADRNGLDEASRTERLTVATLRRARPVRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGTPLTLHFHPRCHDSWKLEVEAHRSDSEAAQSQRIETPAA*
Ga0105245_129624372	3300009098	Miscanthus Rhizosphere	MNGPASADRKTSEPVPRAERHTVPELRRAKSIRLWGGKGCGVPCDFCRVLLSDTEIEYEVEARLDGVPLTLHFHPRCYDAWKAECDSVDENTSGPTAA*
Ga0105237_100589054	3300009545	Corn Rhizosphere	MNGPASADRSNPDDAPRTERLSVAALRRARSIRLWGGKGCGVPCDFCRVLVSTTEVEYEVEAELDGTPVTLHFHPRCHDVWKAEVDGLAGSEAPPPHLSPPAA*
Ga0105237_101229354	3300009545	Corn Rhizosphere	DEVSRTERLSVAALRRARPIRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAVLDGAPMTLHFHPRCHDAWKLEIEAHRADTEPAGAQIQTPAA*
Ga0105237_126087801	3300009545	Corn Rhizosphere	SADRNGLDEASRTERLTVATLRRARPVRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGTPVTLHFHPRCHDVWKAEVDGLAGTDAAEAPTSHLSPPAA*
Ga0105238_105734461	3300009551	Corn Rhizosphere	MNGSASADRTKTTEAPRTERLTVAELRRATPVRLWGGKGCGVPCDFCRVLVSNSEVEYEVEAQLDGTPVTLHFHPRCHDAWKAEVEASPAGAHEVTQQPTVQTPAA*
Ga0105238_122687371	3300009551	Corn Rhizosphere	MNGSASADLTKAAEAPRTARLTVAELRRAQPVRLWGGKGCGIPCDFCRVLVSSSEVEYEVEAQLDGATVTLHFHPRCHDVWKAEIEALPAPEATQEPTLQTPAA*
Ga0134125_101577304	3300010371	Terrestrial Soil	MNGPASADRKTLDEASRTERLNVAALRRARPVRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGASVTLHFHPRCHDAWKLEIEAHTAENGLTESERMPTSAA*
Ga0134125_130571271	3300010371	Terrestrial Soil	NFSETPRTERLTVAALRRAEALRLWGGKGCGVPCDFCRVLVSDAEVEYEVEAQLDGQRLTLHFHPRCYDTWKTESEAAGGAGA*
Ga0134128_122922871	3300010373	Terrestrial Soil	MNGPAAADVTNFDEMPRTERLTVAALRRAEAIRLWGGKGCGVPCDFCRVLVSDSKVEYEVEAQLDGQRLTLHFHPRCYDTWKTESEAAAAGA*
Ga0126381_1035910122	3300010376	Tropical Forest Soil	MNGPASADRTNTEPEDEAPRTGRLTVAALRRALPIRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAQLDGERITLHFHPRCHDAWKSELEAPAPPPPCA*
Ga0134126_1000116732	3300010396	Terrestrial Soil	MNGPASADRTSPAEEVLRTERMTVAALRRAVPIRLWGGKGCGAPCDFCRVLVSSAEIEYEVEAQLDGAAVTLHFHPRCHDAWKAEVDAQGTVTAPAQRAESPAA*
Ga0134126_124827511	3300010396	Terrestrial Soil	MNGPASADRKTLDEASRTERLNVAALRRARPGRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGASVTLHFHPRCHDAWKLEIEAHTSENGLTESERMPTSAA*
Ga0150983_112671952	3300011120	Forest Soil	MNGPTPAEPNPEEEPRTERLAVTTLRRAKPVRLWGGKGCGAPCDFCRVLVAATEIEYEVEAELDGARVTLHFHPRCHDAWRAEAEVSSPVASAPPRMQTPA*
Ga0150983_146982962	3300011120	Forest Soil	MNGSAPADRSKPEEAARTERLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSTTEVEYEVEAELDGEPLTLHFHPRCHDAWKMESEAVLEQARAQQAAP*
Ga0168317_10286583	3300012982	Weathered Mine Tailings	MRMNGPASADRKSLDEASRTERLTVAALRWARPVRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGAPLTLHFHPRCHDSWKLEIEAHRSDSEPAQSPRIQNPAA*
Ga0157370_105675092	3300013104	Corn Rhizosphere	MNGPASADRKTPDEVSRTERLSVAALRRARPIRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGAPVTLHFHPRCHDVWKGEIEGLA
Ga0157369_108776901	3300013105	Corn Rhizosphere	MNGPASADRKTPDEVSRTERLSVAALRRARPIRLWGGKGCGVPCDFCRVLVSSSEVEYEVEAELDGAPVTLHFHPRCHDVWKAEIDGLATSEPPPSQLSPPAA*
Ga0157374_107647502	3300013296	Miscanthus Rhizosphere	MNGSASADRNGLDEASRTERLTVATLRRARPVRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGAPVTLHFHPRCHDAWKLEIEAHRADGETTDAERRHTPAA*
Ga0181534_103742602	3300014168	Bog	MNGPTPADRLQPLLEEPRTERLSVAALRRARPGRLWGGKGCGAPCDFCRVLVSPSEVEYEVEAELDGVALTLHFHPRCHDIWRAEADSTGDSSQPDSGPAVA*
Ga0163163_104382802	3300014325	Switchgrass Rhizosphere	MNGPASADHKAPKPAPRAERLTVTELRRVKSVRLWGGKGCGVPCDFCRVLLSDAEVEYEVEAQLDGAPLTLHFHLRCYDTWKSECDSTDENTSGPAAA*
Ga0157376_105684512	3300014969	Miscanthus Rhizosphere	MNGPASGDRKSLDEASRTERLNVSALRRARPVRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGASVTLHFHPSCHDAWKLEIEAQQSQSEPAESQRLQSPAA*
Ga0187890_105112001	3300018044	Peatland	MNGSAPADRTKPEEAPRTERLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSASEIEYEVEAELDGERVTLHFHPRCHDAWKTEAEAVSAQSPRAQA
Ga0187771_101863953	3300018088	Tropical Peatland	MGQLQGRRMNGSASADRTNTEPEDQAPRTARLTVSALRRALPLRLWGGKGCGAPCDFCRVLVSSSEVEYEVEVQLDGERITLHFHPRCHDAWKSESEAGSAPSQA
Ga0181502_12335142	3300019242	Peatland	MNGPASAERKNVDETPRTERLTVAALRRAEAIRLWGGKGCGVPCDFCRVLLSDSEVEYEVDARLDNQPLTLHFHPRCYDTWKTESESAGTVEAAEAEQTPRAKASP
Ga0181506_13660232	3300019260	Peatland	MNGPASADRKNPEEAPRTERLTVTALRRAQSIRLWGGKGCGAPCDFCRVLVSPTEVEYEVEAQLDGQPVTLHFHPRCHEIWKTECEALAVQTTQQGAKNSL
Ga0210407_108250421	3300020579	Soil	MNGSASADRANTEPEDEAPRTGRLTVTALRRASPIRLWGGKGCGVPCDFCRVLVSSNEVEYEVEAQLDGERITLHFHPRCHDAWKSESEAGSAPSPGVKQNSL
Ga0210403_101927933	3300020580	Soil	MQSRDCKVHKMNGPASADRKNPEEAPRTERLTVSALRRALSIRLWGGKGCGAPCDFCRVLLSATEVEYEVEAQLDGQPVTLHFHPRCHETWKTECEAVAAQAAQQGAKNSR
Ga0179596_100472833	3300021086	Vadose Zone Soil	MNGPASADRKTPEEAPRTERLTVTALRRAVSIRLWGGKGCGAPCDFCRVLVSPTEVEYEVEAQLDGQPLTLHFHPRCHETWKTECETLAAQAVQQGAKNSR
Ga0210406_100583714	3300021168	Soil	MNGPASADRKNPEEAPRTERLTVTALRRAVSIRLWGGKGCGAPCDFCRVLVSPTEVEYEVEAQLDGKPVTLHFHPRCHETWKTECETLAGQVAQQGAKNSR
Ga0210400_106645751	3300021170	Soil	MNGPASADRKNPEEAPRTERLTVSALRRAQSIRLWGGKGCGAPCDFCRVLLSATEVEYEVEAQLDGQPVTLHFHPRCHETWKTECEAVAAQAAQQ
Ga0210396_106450452	3300021180	Soil	MNGPAPADRNKPGEAPRTERLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSTTEIEYEVEAELDGEPLTLHFHPRCHDAWKMESEAVLEQARAQQAAP
Ga0210388_100140571	3300021181	Soil	ADRNKPGEAPRTERLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSTTEIEYEVEAELDGEPLTLHFHPRCHDAWKMESEAVLEQARAQQAAP
Ga0210397_104954072	3300021403	Soil	MNGPASADRKNPEEVPRTERLTVTALRRAVSTRLWGGKGCGAPCDFCRVLVSPTEVEYEVEAQLDGQPVTLHFHPRCHETWKTECETLAAQAAQQGAKNSR
Ga0210389_104102553	3300021404	Soil	MNGPAPADRNKPGEAPRTERLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSTSEIEYEVEAELDGEPLTLHFHPRCHDAWKMESEAVLEQTRAQQAAP
Ga0210387_108670271	3300021405	Soil	EEVPRTERLTVTALRRAISIRLWGGKGCGAPCDFCRVLVSPTEVEYEVEAHLDGQPVTLHFHPRCHETWKTECETLAGQAAQQGAKNSR
Ga0210386_105401503	3300021406	Soil	KVHKMNGPASADRKNPEEAPRTERLTVSALRRALSIRLWGGKGCGAPCDFCRVLLSATEVEYEVEAQLDGQPVTLHFHPRCHETWKTECETLAAQAAQQGAKNSR
Ga0210394_117484682	3300021420	Soil	TGSKRRVATSVAVLAPSSRRAHSEHDVSGQMQSRDCKVHKMNGPASADRKNPEEVPRTERLTVTALRRALSIRLWGGKGCGAPCDFCRVLLSATEVEYEVEAQLDGQPVTLHFHPRCHETWKTECEAVAAQAAQQGAKNSR
Ga0210384_110353701	3300021432	Soil	MQSRDCKVHKMNGPASADRKSPDEAPRTERLTVSALRRALSIRLWGGKGCGAPCDFCRVLLSATEVEYEVEAQLDGQPVTLHFHPRCHET
Ga0210392_104207232	3300021475	Soil	MNGPASVDRKTVEETPRTERLTVAALRRAEPLRLWGGKGCGIPCDFCRVLLTDTEVEYEVDARLDSQPLTLHFHPRCYDIWKTESEAASAEGVAETDEPPRAKASP
Ga0210392_109978181	3300021475	Soil	MNGSASADRKGLDEASRTERLTVAALRRARPIRLWGGKGCDVPCDFCRVLVSSTEVEYEVEAELDGTRVTLHFHPRCHDAWK
Ga0210398_101837363	3300021477	Soil	SGQIQSRDCKVDKMNGSAPADRSKPEEAPRTERLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSTTEVEYEVEAELDGEPLTLHFHPRCHDAWKMESEAVLEQARAQQAAP
Ga0210410_117301632	3300021479	Soil	RRAHSERDVSGQMQSRDCKVHKMNGPASADRKNPEEAPRTERLTVSALRRAQSIRLWGGKGCGAPCDFCRVLLSATEVEYEVEAQLDGQPVTLHFHPRCHETWKTECEAVAAQAAQQGAKNSR
Ga0210409_103147022	3300021559	Soil	MNGPASADRNSPEEAPRTERLTVSALRRALSIRLWGGKGCGAPCDFCRVLLSATEVEYEVEAQLDGQPVTLHFHPRCHETWKTECEAVAAQAAQQGAKNSR
Ga0210409_117300071	3300021559	Soil	MNGSAPADRSKPEEAPRTERLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSASEIEYEVEAELDGKRLTLHFHHRCHDAWKMES
Ga0242668_11454841	3300022529	Soil	QIQSRDCKVDKMNRSAPADRSKPEEAPRTERLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSTTEVEYEVEAELDGEPLTLHFHPRCHDAWKMESEAVLEQARAQQAAP
Ga0242654_101704242	3300022726	Soil	MNGPASDDRNASEEAPRPERLTVAALRRATPIRLWGGKGCGVPCDFCRVLVSSNEIEYEVEAQLDGARVTLHFHPRCHDAWKAEIETPAGA
Ga0179589_104090751	3300024288	Vadose Zone Soil	MNGPASADRKNPEEAPRTERLTVTALRRAVSIRLWGGKGCGAPCDFCRVLVSPTEVEYEVEAQLDGQPVTLHFHPRCHETWKT
Ga0207699_111761991	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MNGPASADRNGLDEASRTERLTVAALRRARPIRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGAPVTLHFHPRCHDVWNAEIDELAASAPPPSQLSPPAA
Ga0207707_100324663	3300025912	Corn Rhizosphere	MNGSASADRNGLDEASRTERLTVATLRRARPVRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGAPVTLHFHPRCHDAWKLEIEAHRSDGETTDAERRHTPAA
Ga0207695_101971582	3300025913	Corn Rhizosphere	MNGPAPADRTGPELARSERLSVAALRRAKPGRLWGGKGCGAPCDFCRVLVSDTEIEYEVEAELDGARLTLHFHPRCHEAWKSECDVDAE
Ga0207695_103137392	3300025913	Corn Rhizosphere	MNGTASADRNNYPETPRTERLTVAALRRATPIRLWGGKGCGVPCDFCRVLISDTEVEYEVDADLDDQRLTLHFHPRCYDIWKTESEAAGAAEATEAAEPSRAKATP
Ga0207695_108149411	3300025913	Corn Rhizosphere	MNGPASADRTADSQAPRTERLTVAELRRATPLRLWGGKGCGVACDFCRVLVSSNEIEYEVEAQLDGARVTLHFHPRCHDAWKIELATGEAQESEQPRIQTPA
Ga0207649_112910861	3300025920	Corn Rhizosphere	MNGSASADRNGLDEASRTERLTVATLRRARPVRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGAPVTLHFHPRCHDAWKLEIEAHRSDGETTDA
Ga0207700_100208724	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MNGPASADRNGLDEASRTERLTVAALRRARPIRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGAPLTLHFHPRCHDSWKLEVEAHRSDDEPVPAQRVQNPAA
Ga0207700_114915491	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MNGPASADRNGLDEASRTERLTVAALRRARPIRLWGGKGSGIPCDFCRVLVSSTEVEYEVEAQLDGAPVTLHFHPRCHDAWKLEIEAHRSDSEPTPAPRIQNPAA
Ga0207698_107149171	3300026142	Corn Rhizosphere	MNGPASADRKTLDEASRTERLNVAALRRARPVRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGASVTLHFHPRCHDAWKLEIEAHTSESGLTESERMPTSAA
Ga0208602_10107172	3300027067	Forest Soil	MNGPAPADRSKPEDAPRTERLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSTTEVEYEVEAELDGEPLTLHFHPRCHDAWKMESEAVLEQARAQQAAP
Ga0209380_108180292	3300027889	Soil	KMNGPAPADRSKPEDAPRTERLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSTTEVEYEVEAELDGEPLTLHFHPRCHDAWKMESEAVLEQARAQQAAP
Ga0209624_100208373	3300027895	Forest Soil	MNGPAPADRNKPGDAPRTERLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSTTEIEYEVEAELDGEPLTLHFHPRCHDAWKMESEAVLEQARAQQAAP
Ga0268264_107462461	3300028381	Switchgrass Rhizosphere	MKGPASADRKTPELVPRTERLTVTELRRVKSVRLWGGKGCGVPCDFCRVLLSDTEVEYEVEAQLDGVPLTLHFHPRCYDAWKAECDSMDENTSGPAAA
Ga0137415_102968612	3300028536	Vadose Zone Soil	MNGPASADRKTPEEAPRTERLTVTALRRAASIRLWGGKGCGAPCDFCRVLVSPTEVEYEVEAQLDSQPVTLHFHPRCHEAWKTECETLAAQAQAQGAQQGAKNSR
Ga0265334_100272683	3300028573	Rhizosphere	MNGPASADRDGFDEASRTGRLNVAALRRARPVRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGAPVTLHFHPRCHDAWKLEVEAHRSDSEPPQPQRIQTPAA
Ga0265334_102231831	3300028573	Rhizosphere	MNGSASADRNGLDEASRTERLTVATLRRARPVRLWGGKGCGVPCDFCRVLVSSTEVEYEVEAELDGAPVTLHFHPRCHDAWKLEIEAHRSDGEATDDERRHTPAA
Ga0311338_115126561	3300030007	Palsa	MNGPAPADRIEPEGTTRTERLSVAALRRALSIRLWGGKGCGVPCDFCRVLVSASEVEYEVEAELDGEPLTLHFHPRCHDAWKME
Ga0311372_106124343	3300030520	Palsa	ADRSKPEEAPRTDRLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSTTEVEYEVEAELDGEPLTLHFHPRCHDAWKMESEAVLEQARTQAAP
Ga0311356_107972511	3300030617	Palsa	MNGPAPADRIEPEGSTRTERLSVAALRRALSIRLWGGKGCGVPCDFCRVLVSASEVEYEVEAELDGEPLTLHFHPRCHDAWKMESEAASGSEE
Ga0302310_101431373	3300030737	Palsa	MNGPAPADRIEPEGTTRTERLSVAALRRALSIRLWGGKGCGVPCDFCRVLVSASEVEYEVEAELDGEPLTLHFHPRCHDAWKMESEAASGSEEQARKQATP
Ga0075396_19460572	3300030776	Soil	DVTNFTETPRTERLTVAALRRAEAIRLWGGKGCGVACDFCRVLVSESEVEYEVEAQLDGERLTLHFHPRCYDTWKTESEAAAAGAGV
Ga0265723_10007452	3300030872	Soil	MNGPAPADRNKPEDAPRTERLSVAALRRAQPIRLWGGKGCGVPCDFCRVLVSKSEVEYEVEAELDGEPLTLHFHPRCHDAWKVESE
Ga0075382_116707951	3300030917	Soil	ADVTNFTETPRTERLTVAALRRAEAIRLWGGKGCGVACDFCRVLVSESEVEYEVEAQLDGERLTLHFHPRCYDTWKTESEAAAAGAGV
Ga0075399_112308451	3300030967	Soil	MNGPAAADVTNFTETPRTERLTVAALRRAEAIRLWGGKGCGVACDFCRVLVSESEVEYEVEAQLDGERLTLHFHPRCYDTWKTESEAAAAGA
Ga0075394_100616231	3300030969	Soil	ADVTNFTETPRTERLTVAALRRAEAIRLWGGKGCGVACDFCRVLVSESEVEYEVEAQLDGERLTLHFHPRCYDTWKTESEAAAAGA
Ga0073995_121648491	3300031047	Soil	EEAPRTERLTVTALRRAVSIRLWGGKGCGAPCDFCRVLVSPTEVEYEVEAQLDGQPVTLHFHPRCHETWKTECETLAAQAGQQGAKNSR
Ga0170834_1015162581	3300031057	Forest Soil	MNGPATADVTNFTETPRTERLTVAALRRAEAIRLWGGKGCGVPCDFCRVLVSESEVEYEVEAQLDGQRLTLHFHPRCYDIWKTESEAAAGAGA
Ga0170834_1074966623	3300031057	Forest Soil	APAGTGSHPFARAVYGELQGRRMSVSASADRTNTQPEDETSQPTEAPRTGRLTVAALRRAIPLRLWGGKGCGVPCDFCRVLVSSNEVEYEVEAELDGERITLHFHPRCHDVWKSESEAPSGA
Ga0170823_107916001	3300031128	Forest Soil	MNGPAAADVDVKNFDETPRTGRLTVAALRRAEPIRLWGGKGCGVPCDFCRVLVSDSEVEYEVEAQLDGERLTLHFHPRCYDIWKTES
Ga0170824_1137355711	3300031231	Forest Soil	PASADRKSLDEASRTERLNVAALRRARAVRLWGGKGCGVPCDYCRVLVSSTEVEYEVEAELDGAPVTLHFHPRCHDAWKLEVEAHRSDGEQPTESQQVQTPAA
Ga0170824_1149979332	3300031231	Forest Soil	MNGPAPADRNKPGEAPRTERLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSTTEVEYEVEAELDGEPLTLHFHPRCHDAWKTESEAVLEQARAQAAP
Ga0265340_103762921	3300031247	Rhizosphere	PEEAPRTERLTVTALRRAVSIRLWGGKGCGAPCDFCRVLVSLTEVEYEVEAQLDGQPVTLHFHPRCHETWKTECETLAAQAAQQGAKNSR
Ga0170820_146714581	3300031446	Forest Soil	MNGPATADVTNFTETPRTERLTVAALRRAEAIRLWGGKGCGVACDFCRVLVSESEVEYEVEAQLDGERLTLHFHPRCYDTWKTESE
Ga0170820_155220402	3300031446	Forest Soil	GCKVHKMNGPASADRKNPEEVPRTERLTVTALRRAVSIRLWGGKGCGAPCDFCRVLVSPTEVEYEVEAQLDGQPVTLHFHPRCHETWKTECESLAGQAAQQGAKNSR
Ga0170818_1047734801	3300031474	Forest Soil	AGLQGIRMNGPASADRKSLDEASRTERLNVAALRRARAVRLWGGKGCGVPCDYCRVLVSSTEVEYEVEAELDGAPVTLHFHPRCHDAWKLEVEAHRSDGEQPTESQQVQTPAA
Ga0170818_1151598011	3300031474	Forest Soil	MNGPAAADVTNFTETPRTERLTVAALRRAEAIRLWGGKGCGVACDFCRVLVSESEVEYEVEAQLDGERLTLHFHPRCYDTWKTESE
Ga0307508_104308122	3300031616	Ectomycorrhiza	MNGPASADRKNPEEAPRTERLTVTALRRAVSIRLWGGKGCGAPCDFCRVLVSPTEVEYEVEAQLDGQPVTLHFHPRCHETWKTECETLAAQAAQQGAKNSR
Ga0310686_1024554527	3300031708	Soil	MNGPASADRTNCEETPRTERLTVAALRRAVPLRLWGGKGCGAPCDFCRVLVSATEVEYEVDAQLDDQQLTLHFHPRCYDAWKTETEAALTAEADIDAATKAPRVKTSSP
Ga0310686_1055632023	3300031708	Soil	MHGSAPADCTKPGEAPRTERLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSTSEVEYEVEAELDGEPLTLHFHPRCHDAWKMESEAEAVPEQAQQGAKNSR
Ga0310686_1125227722	3300031708	Soil	MNGPAPADRNKPEDAPRTERLSVAALRRAQPIRLWGGKGCGVPCDFCRVLVSKSEVEYEVEAELDGEPLTLHFHPRCHDAWKVESEAVLEQAGAQQGAKNSR
Ga0310686_1141087431	3300031708	Soil	MNGPASADHDDFEETPRTGRLTVAALRRAEPIRLWGGKGCGVPCDFCRVLVSDTEVEYEVDAQLDNERVTLHFHPRCYDIWKTESEAAATVASAEETQAETLRAKAAP
Ga0302319_116761471	3300031788	Bog	MNGPASVERKNVDETPRAERLTVAALRRAEPIRLWGGKGCGVPCDFCRVLLSDSEVEYEVDARLDNQPLTLHFHPRCYDIWKTESEAASAAEATEAEKKPRAKASP
Ga0307479_103792661	3300031962	Hardwood Forest Soil	MNGPASADRTNTEPDEAPRTGRLTVAALRRAVPVRLWGGKGCGVPCDFCRVLVSSSEVEYEVEAQLDGERITLHFHPRCHDAWKSESDAASAPSRA
Ga0307479_105501052	3300031962	Hardwood Forest Soil	MNGSAPADRTNTSPEAEAPRTERLTVAALRRAVPIRLWGGKGCGVACDFCRVLVSTSEVEYEVEAELDGKRITLHFHPRCHDAWKSESEADSPPSPA
Ga0311301_109243442	3300032160	Peatlands Soil	MNGPASADRKNPEEAPRTERLTVTALRRAVSIRLWGGKGCGAPCDFCRVLVSQTEVEYEVEAQLDGQAVTLHFHPRCHETWKTECETLAAQAAQQGAKNSR
Ga0307470_110740511	3300032174	Hardwood Forest Soil	MNGPASADRKNPEEAPRTERLTVTALRRAVSIRLWGGKGCGAPCDFCRVLVSPTEVEYEVEAQLDGQPVTLHFHPRCHETWKTECETLAGQAAQQGAKNSR
Ga0307471_1008614741	3300032180	Hardwood Forest Soil	MNGPASADRKSPEETPRTERLTVAALRRARPIRLWGGKGCGVACDFCRVLVSSTEVEYEVEADLDGSPVTLHFHPRCHDTWKAEIEGLGAGADAATQPHMRPPAA
Ga0348332_107711631	3300032515	Plant Litter	RYSPETVRLYKMHGSAPADCTKPGEAPRTERLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSTSEVEYEVEAELDGEPLTLHFHPRCHDAWKMESEAEAVPEQAQQGAKNSR
Ga0348332_122766032	3300032515	Plant Litter	GQLQIWRLQGRPMNGPASADHDDFEETPRTGRLTVAALRRAEPIRLWGGKGCGVPCDFCRVLVSDTEVEYEVDAQLDNERVTLHFHPRCYDIWKTESEAAATVASAEETQAETLRAKAAP
Ga0348332_126983481	3300032515	Plant Litter	MNGPAPADRNKPGEAPRTERLTVAALRRAQPIRLWGGKGCGVPCDFCRVLVSTSEIEYEVEAELDGEPLTLHFHPRCHDAWKMESEAVLEQARAQPAP
Ga0335075_100367574	3300032896	Soil	MNGPASADRKSPDEASRTERLTVAALRRVRPVRLWGGKGCGAPCDFCRVLVSSTEVEYEVEAELDGAPVTLHFHPRCHDAWKLEIEAHRASTEAPESQVQNPAA
Ga0316628_1003256552	3300033513	Soil	MNGYASADRTIPGQAPRTERLTVAALRRALPLRLWGGKGCGDPCDFCRVRVSSTEIEYEVEAQLDGERLTLHFHTRCHDAWKTECASPEAAASGPRGQPPPA
Ga0316215_10347931	3300033544	Roots	MNGPASADRKNPEEVPRTERLTVTALRRAVSIRLWGGKGCGAPCDFCRVLVSPTEVEYEVEAQLDGQPVTLHFHPRCHETWKTECETLAAQ
Ga0372943_0796747_77_370	3300034268	Soil	MNGPASIDRTERLTVAELRRATPIRLWGGKGCGVACDFCRVLVSSDEIEYEVEAQLDDRRVTLHFHTRCHDAWKAELESSSGGDAQAIEQPRMQTLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063896

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences