Metagenome / Metatranscriptome Family F063882

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063882
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	78 residues
Representative Sequence	MTAELTADMSVAPEIAILAEASLLIPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIEIEDQPEY
Number of Associated Samples	121
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.84 %
% of genes near scaffold ends (potentially truncated)	96.12 %
% of genes from short scaffolds (< 2000 bps)	95.35 %
Associated GOLD sequencing projects	119
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.419 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.605 % of family members)
Environment Ontology (ENVO)	Unclassified (36.434 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.760 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.07% β-sheet: 0.00% Coil/Unstructured: 75.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF13242	Hydrolase_like	25.58
PF13344	Hydrolase_6	9.30
PF13432	TPR_16	1.55
PF06245	DUF1015	0.78
PF04542	Sigma70_r2	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.78
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.78
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.78
COG4198	Uncharacterized conserved protein, DUF1015 family	Function unknown [S]	0.78
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.42 %
Unclassified	root	N/A	25.58 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.42 %
Unclassified	root	N/A	25.58 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.42 %
Unclassified	root	N/A	25.58 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	74.42 %
Unclassified	root	N/A	25.58 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	73.64 %
Unclassified	root	N/A	25.58 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	72.09 %
Unclassified	root	N/A	25.58 %
Armatimonadia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia	0.78 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	26.36 %
Unclassified	root	N/A	25.58 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Armatimonadia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.58 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	15.50 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	6.20 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	2.33 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Armatimonadia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.58 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	13.95 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	6.20 %
Thermobifida	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Thermobifida	2.33 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Armatimonadia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.58 %
Actinomadura oligospora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora	10.85 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	6.20 %
Thermobifida halotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Thermobifida → Thermobifida halotolerans	2.33 %
Actinomadura madurae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	0.78 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Armatimonadia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105825953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	943	Open in IMG/M
3300004152\|Ga0062386_100875713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	742	Open in IMG/M
3300004152\|Ga0062386_100959645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	708	Open in IMG/M
3300005176\|Ga0066679_10405834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	892	Open in IMG/M
3300005186\|Ga0066676_10839762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	620	Open in IMG/M
3300005187\|Ga0066675_10729530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	746	Open in IMG/M
3300005332\|Ga0066388_107892577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora	533	Open in IMG/M
3300005341\|Ga0070691_10613435	Not Available	643	Open in IMG/M
3300005435\|Ga0070714_101250793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	724	Open in IMG/M
3300005436\|Ga0070713_101248876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Thermobifida → Thermobifida halotolerans	719	Open in IMG/M
3300005437\|Ga0070710_10671322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	728	Open in IMG/M
3300005444\|Ga0070694_100809797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	768	Open in IMG/M
3300005445\|Ga0070708_101822260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora	565	Open in IMG/M
3300005542\|Ga0070732_10883223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	546	Open in IMG/M
3300005549\|Ga0070704_102093332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora	526	Open in IMG/M
3300005563\|Ga0068855_101300596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	753	Open in IMG/M
3300005575\|Ga0066702_10763844	Not Available	575	Open in IMG/M
3300005586\|Ga0066691_10833489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora	543	Open in IMG/M
3300005617\|Ga0068859_100646692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora	1149	Open in IMG/M
3300005842\|Ga0068858_101144071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	764	Open in IMG/M
3300005843\|Ga0068860_100546254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora	1160	Open in IMG/M
3300005844\|Ga0068862_100487374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora	1168	Open in IMG/M
3300006041\|Ga0075023_100571156	Not Available	521	Open in IMG/M
3300006086\|Ga0075019_10115572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae	1551	Open in IMG/M
3300006176\|Ga0070765_100218515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1736	Open in IMG/M
3300006574\|Ga0074056_11844730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora	580	Open in IMG/M
3300006579\|Ga0074054_11911811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300006603\|Ga0074064_11810102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora	1461	Open in IMG/M
3300006605\|Ga0074057_12153312	Not Available	515	Open in IMG/M
3300006606\|Ga0074062_12638230	Not Available	501	Open in IMG/M
3300006804\|Ga0079221_11654940	Not Available	520	Open in IMG/M
3300006953\|Ga0074063_14175036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora	527	Open in IMG/M
3300006954\|Ga0079219_10496810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora	852	Open in IMG/M
3300007076\|Ga0075435_101819676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora	534	Open in IMG/M
3300009012\|Ga0066710_102579541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	732	Open in IMG/M
3300009551\|Ga0105238_10989633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	861	Open in IMG/M
3300010358\|Ga0126370_10340397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1208	Open in IMG/M
3300010361\|Ga0126378_11328865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	813	Open in IMG/M
3300010373\|Ga0134128_12335969	Not Available	589	Open in IMG/M
3300010375\|Ga0105239_11033730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	945	Open in IMG/M
3300010376\|Ga0126381_102348750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	765	Open in IMG/M
3300010396\|Ga0134126_10961624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	958	Open in IMG/M
3300010396\|Ga0134126_11611040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	714	Open in IMG/M
3300010397\|Ga0134124_11175649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	786	Open in IMG/M
3300010397\|Ga0134124_12664393	Not Available	543	Open in IMG/M
3300010399\|Ga0134127_12500158	Not Available	596	Open in IMG/M
3300012198\|Ga0137364_10539898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	877	Open in IMG/M
3300012199\|Ga0137383_10723253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	727	Open in IMG/M
3300012201\|Ga0137365_10860616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Thermobifida → Thermobifida halotolerans	662	Open in IMG/M
3300012206\|Ga0137380_10758452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	839	Open in IMG/M
3300012207\|Ga0137381_10615467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	946	Open in IMG/M
3300012285\|Ga0137370_10898084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	548	Open in IMG/M
3300012356\|Ga0137371_10113426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2115	Open in IMG/M
3300012357\|Ga0137384_10282122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1383	Open in IMG/M
3300012361\|Ga0137360_11243951	Not Available	644	Open in IMG/M
3300012507\|Ga0157342_1078056	Not Available	516	Open in IMG/M
3300012514\|Ga0157330_1021068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	745	Open in IMG/M
3300012515\|Ga0157338_1008835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	985	Open in IMG/M
3300012519\|Ga0157352_1104559	Not Available	507	Open in IMG/M
3300012683\|Ga0137398_10147524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1524	Open in IMG/M
3300012944\|Ga0137410_10489166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1004	Open in IMG/M
3300012955\|Ga0164298_10750833	Not Available	691	Open in IMG/M
3300012957\|Ga0164303_10695741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	684	Open in IMG/M
3300013100\|Ga0157373_10378204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1013	Open in IMG/M
3300013307\|Ga0157372_11673709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	732	Open in IMG/M
3300013308\|Ga0157375_13201618	Not Available	546	Open in IMG/M
3300015372\|Ga0132256_100261947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1802	Open in IMG/M
3300015373\|Ga0132257_103773683	Not Available	551	Open in IMG/M
3300016387\|Ga0182040_10376866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1107	Open in IMG/M
3300017937\|Ga0187809_10114081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	914	Open in IMG/M
3300017959\|Ga0187779_10683941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	693	Open in IMG/M
3300017966\|Ga0187776_10969787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	623	Open in IMG/M
3300017974\|Ga0187777_10198264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1352	Open in IMG/M
3300018060\|Ga0187765_10832836	Not Available	618	Open in IMG/M
3300018433\|Ga0066667_11595349	Not Available	581	Open in IMG/M
3300019362\|Ga0173479_10418447	Not Available	652	Open in IMG/M
3300019888\|Ga0193751_1182476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	721	Open in IMG/M
3300020081\|Ga0206354_10097105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	756	Open in IMG/M
3300021478\|Ga0210402_10237891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1679	Open in IMG/M
3300021478\|Ga0210402_11060420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	737	Open in IMG/M
3300021478\|Ga0210402_11256966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	667	Open in IMG/M
3300024331\|Ga0247668_1009723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	2010	Open in IMG/M
3300024347\|Ga0179591_1218094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1477	Open in IMG/M
3300025903\|Ga0207680_10265989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1188	Open in IMG/M
3300025906\|Ga0207699_10376938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1006	Open in IMG/M
3300025908\|Ga0207643_11084079	Not Available	517	Open in IMG/M
3300025917\|Ga0207660_11437283	Not Available	558	Open in IMG/M
3300025931\|Ga0207644_10536645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	967	Open in IMG/M
3300025939\|Ga0207665_10040786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3098	Open in IMG/M
3300025981\|Ga0207640_10283474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1302	Open in IMG/M
3300026041\|Ga0207639_10604121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia	1012	Open in IMG/M
3300026142\|Ga0207698_12122581	Not Available	575	Open in IMG/M
3300027568\|Ga0208042_1181412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	523	Open in IMG/M
3300027775\|Ga0209177_10113735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	876	Open in IMG/M
3300027775\|Ga0209177_10159880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	772	Open in IMG/M
3300028138\|Ga0247684_1052188	Not Available	662	Open in IMG/M
3300028380\|Ga0268265_11244032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	743	Open in IMG/M
3300028536\|Ga0137415_11286247	Not Available	549	Open in IMG/M
3300030969\|Ga0075394_11552377	Not Available	536	Open in IMG/M
3300031090\|Ga0265760_10074809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1043	Open in IMG/M
3300031236\|Ga0302324_102576063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	619	Open in IMG/M
3300031544\|Ga0318534_10250614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1021	Open in IMG/M
3300031549\|Ga0318571_10142611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	822	Open in IMG/M
3300031564\|Ga0318573_10219172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1011	Open in IMG/M
3300031573\|Ga0310915_10363582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1026	Open in IMG/M
3300031713\|Ga0318496_10639276	Not Available	587	Open in IMG/M
3300031713\|Ga0318496_10844781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora	504	Open in IMG/M
3300031716\|Ga0310813_11960751	Not Available	552	Open in IMG/M
3300031770\|Ga0318521_10779629	Not Available	582	Open in IMG/M
3300031771\|Ga0318546_10946811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300031846\|Ga0318512_10342740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	747	Open in IMG/M
3300031859\|Ga0318527_10445302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura oligospora	552	Open in IMG/M
3300031896\|Ga0318551_10764150	Not Available	561	Open in IMG/M
3300031942\|Ga0310916_11080406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	667	Open in IMG/M
3300031954\|Ga0306926_11442194	Not Available	797	Open in IMG/M
3300032008\|Ga0318562_10589563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	642	Open in IMG/M
3300032052\|Ga0318506_10243128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Thermobifida → Thermobifida halotolerans	797	Open in IMG/M
3300032064\|Ga0318510_10318334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	651	Open in IMG/M
3300032064\|Ga0318510_10554267	Not Available	502	Open in IMG/M
3300032067\|Ga0318524_10570791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	595	Open in IMG/M
3300032076\|Ga0306924_10351036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1691	Open in IMG/M
3300032261\|Ga0306920_101212507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1090	Open in IMG/M
3300032828\|Ga0335080_10334153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1637	Open in IMG/M
3300032898\|Ga0335072_10916458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	818	Open in IMG/M
3300033134\|Ga0335073_10932361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	909	Open in IMG/M
3300033290\|Ga0318519_10351195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	872	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.17%
Host-Associated	Host-Associated	17.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.29%
Plants	Host-Associated → Plants	17.83%
Aquatic	Environmental → Aquatic	3.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.75%
Freshwater	Environmental → Aquatic → Freshwater	2.33%
Sediment	Environmental → Aquatic → Sediment	1.55%
Peat	Environmental → Terrestrial → Peat	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.79%
Loam	Environmental → Terrestrial → Soil → Loam	9.30%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.30%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.10%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.01%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.10%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.60%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.10%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.33%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.78%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.78%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1058259532	3300000364	Soil	MTAELTADMSVAPEIAILAGASLLVPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIEIEDQPEYGAWLVVLPPGGARARTVIATWPR*
Ga0062386_1008757131	3300004152	Bog Forest Soil	LIADMSVAPEIAILAEAALLVPARSATPAPEVPPVTLGTLARQLRMLAATPERWWGLVRFSPDRSVKIRVEDQPEYEAWLVVLPPG
Ga0062386_1009596452	3300004152	Bog Forest Soil	MSVAPEVAILAEAALLVPAQTATRAPEVPQVTLGTLARQLRMLAATPERWWGLVRFEEDRSVKIGVDGQPEYEAWLVVLPP
Ga0066679_104058342	3300005176	Soil	MSVAPEIAILAEASLLIPAQPARGTSGQAGTRPTLGTLARHLRILAASPERWWGLVRFDPDRSVRIEIEDQPEY
Ga0066676_108397621	3300005186	Soil	MSVAPEIAILAEASLLIPAQSARGNSGQAGTRPTLGTLARHLRILAASPERWWGLVRFDPDRSVRIEIEDQPEYSAWLVVLP
Ga0066675_107295301	3300005187	Soil	MTAELTADMSVAPEIAILAGASLLIPAPPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIEIED
Ga0066388_1078925771	3300005332	Tropical Forest Soil	MSVAPEIAILAGPSLLIAAPPMRAGTPGQEGARPTLGTLARELRLLAAAPERWWGLVRFDPERSVRIEVEDRPEYRAWLVVLPPAQAGQQ
Ga0070691_106134351	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MTAELTADMSVAPEIAILAEASLLIPAQPTPAGTPGARPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIELEDQPEYGAWLVVLPPAR
Ga0070714_1012507931	3300005435	Agricultural Soil	MTAELTADMSVAPEIAILAGASLVIPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIEL
Ga0070713_1012488761	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTAELTADMSVAPEIAILAGASLVIPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIE
Ga0070710_106713221	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTAELTADMSVAPEIAILAGASLVIPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIELED
Ga0070694_1008097972	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MTAELTADISVAPEIAILAGASLLVPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIELEDQPEYGAWLVVLPP
Ga0070708_1018222601	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSVAPEIAILAEASLLIPAQPARGTSGQAGTRPTLGTLARHLRILAASPERWWGLVRFDPDRSVRIEIEDQPE
Ga0070732_108832232	3300005542	Surface Soil	LIADMSVAPEIAILAEAALLVPVQPAARRESNPPTLGTLARRLRMLAATPERWWGLVRFDPDRSVVIEIEDRPEY
Ga0070704_1020933321	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LTAELTADMSVAPEIAILAEASLLIPAQPARGTSGQAGTRPTLGTLARHLRILAASPERWWGLVRFDPDRSVRIEIEDQPEY
Ga0068855_1013005962	3300005563	Corn Rhizosphere	MSVAPEIAILAEASLLIPAQPARATSGQAGTRPTLGTLARHLRILAASPERWWGLVRFDPDRSVRIE
Ga0066702_107638442	3300005575	Soil	LTAELTADMSVAPEIAILAEASLLIAAQPARGTSGQAGTRPTLGTLARHLRILAASPERWWGLVRFDPDRSVRIEIEDQPEY
Ga0066691_108334891	3300005586	Soil	MTAELTADMSVAPEIAILAEASLLIPAQPARGTSGQAGTRPTLGTLARHLRILAASPERWWGLVRFDPDRSVRIQIEDQPEY
Ga0068859_1006466921	3300005617	Switchgrass Rhizosphere	MTAELTADMSAAPEIAILAGASLLVPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSV
Ga0068858_1011440712	3300005842	Switchgrass Rhizosphere	MTAELTADISVAPEIAILAGASLLVPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIELEDQPEYGAWLVVL
Ga0068860_1005462541	3300005843	Switchgrass Rhizosphere	MTAELTADMSVAPEIAILAGASLLVPVQPTPAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVR
Ga0068862_1004873741	3300005844	Switchgrass Rhizosphere	MTAELTADISVAPEIAILAGASLLVPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIELEDQPEYGAWLVVLPPAR
Ga0075023_1005711562	3300006041	Watersheds	LIADMSVAPEIAILAEASLLIPAQPTRAETPGARPTLGTLARQLRILAASPERWWGLVRFDPDRSVRI
Ga0075019_101155721	3300006086	Watersheds	MSVAPEIAILAEAALLVPAQTATRAPEAPRVTLGTLARQLRMLAATPERWWGLVRFDPDRSVKIGVEDQPEYEAWLVVLPPGDSGR
Ga0070765_1002185153	3300006176	Soil	MSVAPEIAILAEASLLIPAQPARGTSGQAGTRPTLGTLARHLRILAASPERWWGLVRFDPDRSVRIEIEDQPEYSAW
Ga0074056_118447301	3300006574	Soil	MSVAPEIAILAEASLLIPAQPTRAGTPGARPTLGTLARHLRILAASPERWWGLVRFDPDRSVRIEIEDQPEYGAWLVVLPPARPG
Ga0074054_119118112	3300006579	Soil	LTAELTADMSVAPEIAILAEASLLIPAQPTRAGTPGARPTLGTLARHLRILAASPERWWGLVRFDPDRSVRIE
Ga0074064_118101021	3300006603	Soil	MSVAPEIAILAEASLLIPAQPTRAETPGARPTLGTLARHLRILAASPERWWGLVRFDPDRSVRIEIE
Ga0074057_121533121	3300006605	Soil	LTAELTADMSVAPEIAILAEASLLIPAQPTRAGTPGARPTLGTLARHLRILAASPERWWGLVRF
Ga0074062_126382302	3300006606	Soil	LTAELTADMSVAPEIAILAEASLLIPAQPTRAETPVARPTLGTLARHLRILAASPERWWGLVR
Ga0079221_116549401	3300006804	Agricultural Soil	LTAELTADMSVAPEIAILAEASLLIPAQPARGTPGQAGTRPTLGTLARHLRILAASPERWWGLVRFDP
Ga0074063_141750361	3300006953	Soil	LTAELTADMSVAPEIAILAEASLLIPAQPTRAGTPGARLTLGTLARHLRILAASPERWWGLVRFDPDRSVRIEIEDQP
Ga0079219_104968101	3300006954	Agricultural Soil	MTAELTADMSIAPEIAILAGASLLVHAQSTRAGTAGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIELEDQPE
Ga0075435_1018196761	3300007076	Populus Rhizosphere	MTAELTADMSVAPEIAILAGASLLVPVQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIELEDQPEYGAWLVV
Ga0066710_1025795411	3300009012	Grasslands Soil	MSVAPEIAILAEASLLIPAQPARAGTPAQAGARPTLGTMARHLRVLAASPERWWGRVRFDPDRSVRIEIEDQPEYSAWLV
Ga0105238_109896331	3300009551	Corn Rhizosphere	MTAELTADMSVAPEIAILAEASLLIPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIELEDQPEYGAWLVVL
Ga0126370_103403972	3300010358	Tropical Forest Soil	MTAELTADMSVAPEIAILAEASLRIPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWERVRFDPDRSVRIEIEDQPEYG
Ga0126378_113288652	3300010361	Tropical Forest Soil	MSVAPEIAMLAEASLLVPAQPIRAATPGQAGARPTLGTLARQLRLIAAAPERWWGLVRFEPDRPVAIT
Ga0134128_123359691	3300010373	Terrestrial Soil	MTAELTADMSVAPEIAILAEASLLIPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRS
Ga0105239_110337302	3300010375	Corn Rhizosphere	MTAELTADMSVAPEIAILAGASLLVPVQPTPAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIELED
Ga0126381_1023487502	3300010376	Tropical Forest Soil	MSVAPEIAILAEASLFVPAQPTLGTLARHLRMLATAPERWWGLVRFDPDRS
Ga0134126_109616242	3300010396	Terrestrial Soil	MTAELTADMSVAPEIAILAGASLLVPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVR
Ga0134126_116110402	3300010396	Terrestrial Soil	MTAELTADISVAPEIAILAGASLLVPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVR
Ga0134124_111756491	3300010397	Terrestrial Soil	MTAELTADISVAPEIAILAGASLLVPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIELEDQPEYGAWLVVLP
Ga0134124_126643931	3300010397	Terrestrial Soil	MSVAPEIAILAEASLLIPAQPARGTSGQAGTRPTLGTLARHLRILAASPERWWGLVRFDPDRSVRNEIEDQPEYAAWL
Ga0134127_125001581	3300010399	Terrestrial Soil	MSVAPEIAILAEASLLIPAQPTPAGTPGARPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIEIEDQPEYTAWLVVLPPAQA
Ga0137364_105398981	3300012198	Vadose Zone Soil	MSAAPEIAILAEASLLIPAQPARPGTPGQAGARPTLGTLARHLRVLAASPERWWGRVRFDPDRS
Ga0137383_107232531	3300012199	Vadose Zone Soil	MSGAPEIAILAEASLLIPAQPARPGTPGEAGTRPTLGTLARHLRVLAASPEQWWGLVRFDPDRSVRIEIGDQPEYGAWL
Ga0137365_108606162	3300012201	Vadose Zone Soil	MSAAPEIAILAEASLLIPAQPARPGTPGQAGARPTLGTLARHLRVLAASPERWWGRVRFDPDRSVRIEIEDQPEYGAWLVV
Ga0137380_107584522	3300012206	Vadose Zone Soil	VPGTAKELPLTAELTADMSVAPEIAILADASLLIPAQPARGNSGQAGTRPTLGTLARHLRVLAASPEQWWGLVRFDPDRSVRIE
Ga0137381_106154672	3300012207	Vadose Zone Soil	LTAELIADMSVAPEIAILAEAARLVPAQSAARPPDGRGLTLGTLARHLRLLAASPERWWGLVRFNPDRSVHIRVEAQPEYEAWLVVLPPRDAGRDCDCDVATL
Ga0137370_108980841	3300012285	Vadose Zone Soil	VPGTAKELPLTAELTADMSVAPEIAILAEASLLIAAQSARGTSGQAGTRPTLGTLARHLRILAASPERWWGLVRFDPDRSVRIEIEDQPEYGAW
Ga0137371_101134264	3300012356	Vadose Zone Soil	MSAAPEIAILAEASLLIPAQPARPGTPGQAGARPTLGTLARHLRVLAASPERWWGRVRFDPDRSVRIAIED
Ga0137384_102821221	3300012357	Vadose Zone Soil	MSVAPEIAILAGPLLVPVQPAARQTSEHSGQGERGTVPPTLGTLARKLRMLAATPERWWGMVRFDPDRSVRIEIEDRPEY
Ga0137360_112439511	3300012361	Vadose Zone Soil	MSVAPEIAILAEASLLIPAQPARAGTPGEAGFRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIEIEDQPEYCAWLVVLPP
Ga0157342_10780561	3300012507	Arabidopsis Rhizosphere	MTAELTADMSVAPEIAILAGASLLVPVQPTRAGTPGTRPTLGTLARHLRILAASPERWWGLVRFDPDRSVRIEIEDRPEYGA
Ga0157330_10210682	3300012514	Soil	MSVAPEIAILAEASLLISAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVHFDPDRSVRIELEDQPEYGAWLVVL
Ga0157338_10088352	3300012515	Arabidopsis Rhizosphere	MTAELTADMSVAPEIAILAGASLLIPAQPMRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIE
Ga0157352_11045591	3300012519	Unplanted Soil	MTAELTADMSVAPEIAILAEASVLIPAQPTRAGTPAARPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIEIEDQPEYGAWLVVLPPARPGQ
Ga0137398_101475241	3300012683	Vadose Zone Soil	VPGTAKELPLTAELTADMSVAPEIAILAEASLLIPAQPARAGTPGEAGTRPTLGALARHLRVLAASPERWW
Ga0157303_101761721	3300012896	Soil	MTAELTADMSAAPEIAILAGTSLLIPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIEIEDQPEYGAWLVVLPPGDTGQDCDCDV
Ga0137410_104891661	3300012944	Vadose Zone Soil	VPGTAKELPLTAELTADMSVAPEIAILAGASLLIPAQPARETSGQAGTRPTLGTLARHLRILAASPERWWGLVRFDPDRSVRIEIEDQPEYGAWLVV
Ga0164298_107508331	3300012955	Soil	MTAELTADMSVAPEIAILAEASLLIPAQPSRATSWQAGTRPTLGTLARHLRILDASPERWWGLVRFDPDRSVRI
Ga0164303_106957412	3300012957	Soil	MTAELTADMSVAPEIAILAGASLLVPVQPTPAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIELEDQPEYGAWLVVLPP
Ga0157373_103782041	3300013100	Corn Rhizosphere	MTAELTADMSVAPEIAILAGASLLVPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIEL
Ga0157372_116737092	3300013307	Corn Rhizosphere	MTAELTADMSVAPEIAILAEASLLIPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIEIEDQP
Ga0157375_132016181	3300013308	Miscanthus Rhizosphere	VPGTAKELPLTAELTADMSAAPEIAILAEGSLLIPAQPTPAGTPGARPTLGTLARHLRILAASPERWW
Ga0132256_1002619471	3300015372	Arabidopsis Rhizosphere	MTAELTADMSVAPEIAILAGASLLIPAQPMRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIELEDQPEYGAW
Ga0132257_1037736832	3300015373	Arabidopsis Rhizosphere	MSVAPEIAMLAGARMLIPAQPMRAGMAGQEGARPTLGPLARQLRLLAAAPERWWGLVRFDPDRSVRIGVEDRP
Ga0182040_103768661	3300016387	Soil	MSVAPEIAILAEGSLFGPAQPTLGTLARRLRMLATAPERWWGLVRFDPDRSVLIE
Ga0187809_101140812	3300017937	Freshwater Sediment	LTADISVAPEIAILAEASLLIPAQPARVGAPAARPTLGTLARHLRLLAAAPERWWGLVRFDP
Ga0187779_106839411	3300017959	Tropical Peatland	LTADMSVAPEIAILAESPLLVPAQPASAPHRAAACQVTLGTLAQRLRMLAATPERWWELVRFDPDRSVRIEVEDQTENEAWLVVM
Ga0187776_109697873	3300017966	Tropical Peatland	MSVAPEIAILADAALLVPAGPAAGPLSRPASPVTLGTLARRLRMLAATPERWWELVRFDPDRSVRIEVED
Ga0187777_101982642	3300017974	Tropical Peatland	MSVAPEIAFLAEATPVVPAQPASRLRAEAASPVTLGTLTCRLRTLAATPERWWALVRFDQDRSVRVRVEDQPEYEAWLVVLPPGDAGQDCDCDVATVIAGEATEGAP
Ga0187765_108328362	3300018060	Tropical Peatland	MLAGTRMLISAPPPMRTGTPGQEGARPTLGTLARQLRLLAAAPERWWGLVRFDPDRSVRI
Ga0066667_115953491	3300018433	Grasslands Soil	MSAAPEIAILAGASLLIPAQPTRAATPGTRPTLGTLARHLRILAASPERWWGLVRFDP
Ga0173479_104184472	3300019362	Soil	MTAELTADMSVAPEIAILAGASLLDPAQPMRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIEIEDQPEYGAWLVVLPPGDTG
Ga0193751_11824761	3300019888	Soil	MSVAPEIAILAEAALLVPAQPATRRPGEPGEPGEQAEAQPTLGTLARRLRMLAATPERWWGLVRFDPDRSVRIEIEDR
Ga0206354_100971051	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MTAELTADMSVAPEIAILAGASLLVPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIELEDQPEYGAWLVVLPPARPGQQS
Ga0210402_102378911	3300021478	Soil	MSVAPEIAILAEASLLIPAQPARGTSGQAGTRPTLGTLARHLRILAASPERWWGLVRFDP
Ga0210402_110604201	3300021478	Soil	VTAELTADMSVAPEIAILAEASLLIPAQPARAGTPGEAGTRPTLGTLARHLRILAASPERWWG
Ga0210402_112569662	3300021478	Soil	MSIAPEIAILAEASLLIPAQPARGTSGHAGTRPTLGTLARHLRILAASPERWWGLVRFDPDR
Ga0247668_10097231	3300024331	Soil	MTAELTADMSVAPEIAILAGASLLVPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIELEDQPEYRAW
Ga0179591_12180942	3300024347	Vadose Zone Soil	MSVAPEIAILAEASLLIPAQPARAGTPGEAGTRPTLGALARHLRVLAASPERWWGLVRFDPDRSVRIEIGDQPEYG
Ga0207680_102659892	3300025903	Switchgrass Rhizosphere	MTAELTADMSVAPEIAILAGASLLVPVQPTPAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRI
Ga0207699_103769382	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTAELTADMSVAPEIAILAGASLLVPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIELEDQPEYGAWLVVLPPARPGQQSTGQD
Ga0207643_110840791	3300025908	Miscanthus Rhizosphere	MTAELTADISVAPEIAILAGASLLVPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIELEDQPEY
Ga0207660_114372831	3300025917	Corn Rhizosphere	MTAELTADMSVAPEIAILAGASLLVPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIELEDQPEYGAWLVVLPPAR
Ga0207681_106307042	3300025923	Switchgrass Rhizosphere	MTAELTADMSVAPEIAILAEASLLIPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIEIEDQPEYGAWLVVLPPARPGQQSTGQDC
Ga0207644_105366452	3300025931	Switchgrass Rhizosphere	MTAELTADMSVAPEIAILAGASLLVPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRI
Ga0207665_100407861	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTAELTADMSVAPEIAILAGASLLVPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIELEDQPEYGAWLVVL
Ga0207640_102834742	3300025981	Corn Rhizosphere	MTAELTADISVAPEIAILAGASLLVPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRI
Ga0207639_106041211	3300026041	Corn Rhizosphere	MTAELTADMSVAPEIAILAEASLLIPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIEIEDQPEY
Ga0207698_121225811	3300026142	Corn Rhizosphere	MTAELTADMSVAPEIAILAGASLLVPVQPTPAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIELEDQPEYGAWLVVLPPARPGQQ
Ga0208042_11814121	3300027568	Peatlands Soil	LIADMSVAPEIAILAEAALLVPAHKATRAPEVRQITLGTLARQLRMLAATPERWWGLVRFDPDRSVKIGVENQPEYEAWL
Ga0209177_101137351	3300027775	Agricultural Soil	MTAELTADMSIAPEIAILAGASLLVHAQSTRAGTAGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIE
Ga0209177_101598801	3300027775	Agricultural Soil	MSVAPEIAILAEASLFIPAQPERGTYGQPGTRPTLGTLARHLRILAASPERWWGLVRFDPDRSVRIEIEDQPEYSAWLVVLP
Ga0247684_10521882	3300028138	Soil	MTAELTADMSVAPEIAILAGASLLIPAPPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIEIEDQPE
Ga0268265_112440321	3300028380	Switchgrass Rhizosphere	MTAELTADISVAPEIAILAGASLLVPAQPTRAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIELEDQPEYGAWLVVLPPARHGQ
Ga0137415_112862471	3300028536	Vadose Zone Soil	MSVAPEIAILAEASLPIPAQPARAGTPGEAGTRPTLGALARHLRVLAASPERWWGLVRFDPDRS
Ga0075394_115523771	3300030969	Soil	LIADMSVAPEIAILAEAALLVPAQPTLGTLARRLRLLAAAPERWWGMVRFDPDRSVRIEI
Ga0265760_100748091	3300031090	Soil	MSVAPEIAILAEAALLLPARPATRAPEVPQVTLGTLAGQLRMLAATPERWWGLVRFNPDRSVEISVEDHPCYRAWLVVLPPGDSGQD
Ga0302324_1025760632	3300031236	Palsa	MSVAPEIARLAEAVLLAPVPSAVSDEGREGSGPVLTLGALAGHLRVLAATPERWWGLVRFDPDRAVKIAVEDHPSYQAWLVVLPPNDGAKDGA
Ga0318534_102506141	3300031544	Soil	MSVAPEIAILAGASPAGAAAARPTLGTLARQLRMLAASPERWWGLVRFD
Ga0318571_101426112	3300031549	Soil	MTAELISEMSVAPEIAVLAGSSLLVPAQPAPAAAPAARPTLGTLARHLRILAASPERWWGLVRFDPDRSVSVQVED
Ga0318573_102191721	3300031564	Soil	MSVAPEIAILAGASPAGAAAARPTLGTLARQLRMLAASPERWWGLVRFDPDRSVRIEVEDRPEYRA
Ga0310915_103635822	3300031573	Soil	MSVAPEIAILAEGSLFGPAQPTLGTLARRLRMLATAPERWWG
Ga0318496_106392762	3300031713	Soil	VTAKLTADMSVAPEIAILAETALLVPAQGGTQATAQHPGHQPGQQGEPVPIRPTLGTLARHLRTLAASPERWWGLVRFDPDRSVRIEIEDRPGY
Ga0318496_108447811	3300031713	Soil	MSVAPEIARLAQAVVLVPARPASRPQEVAVPRVTLGALASRLRTIAAAPERWWGLVRFSPDRSVKIMVDDQPEYQAWLVVLPPGDNGQDCDCD
Ga0310813_119607511	3300031716	Soil	MSVAPEIAILAEASLLIPAQPARAGTPGTRPTLGTLARHLRILAASPERWWGRVRFDPDRSVRIEIEDQPEYSAWLVVLPPAHAGQSSAG
Ga0307469_122863891	3300031720	Hardwood Forest Soil	MSVAPEIAILAEASLLIPAQPARGTSGQAGTRPTLGTLARHLRILAASPERWWGLVRFDPDRSVRIEIEDQPEYSAWLVVLPPAQAGQQSAGQQSAGQQ
Ga0318521_107796291	3300031770	Soil	MTAELISEMSVAPEIAVLAGSSLLVPAQPAPAAAPAARPTLGTLARHLRILAASPERWWGLVRFDPDRS
Ga0318546_109468111	3300031771	Soil	MTAELIAEMSVAPEIAVLAGSSLLVPAQPAPAAAPAARPTLGTLARHLRILAASPERWWGLVRFDPDRS
Ga0318512_103427401	3300031846	Soil	MSVAPEIARLAQAVVLVPARPASRPQEVAVPRVTLGALASRLRTIAAAPERWWGLVRFSPDRSVKIMVDD
Ga0318527_104453021	3300031859	Soil	MSVAPEIARLAQAVVLVPARPASRPQEVAVPRVTLGALASRLRTIAAAPERWWGLVRFSPDRSVKIMVDDQPEYQAWLVVLPPGDTGQDCDCDVAT
Ga0318551_107641501	3300031896	Soil	MSVAPEIARLAQAVVLVPARPASRPQEVAVPRVTLGALASRLRTIAAAPERWWGLVRFSPDRSVKIMVDDQPEYQAW
Ga0310916_110804061	3300031942	Soil	MSVAPEIAILAEGSLFGPAQPTLGTLARRLRMLATAPERWWGLVRFDPDRSVLIEV
Ga0306926_114421941	3300031954	Soil	VTAKLTADMSVAPEIAILAETALLVPAQGGTQATAQHPGHQPGQQGEPVPIRPTLGTLARHLRTLAASPERWWGLVRFDPDRSVRIEIEDRPG
Ga0318562_105895631	3300032008	Soil	MSVAPEIAILAEASLLIPDPPARVRTPAEAGTRPTLGTLARQLRMLAASPERWWGLVRFDPDRSVRIQVEDRPEYRAWLVVLPPA
Ga0318506_102431282	3300032052	Soil	MTAELIAEMSVAPEIAVLAGSSLLVPAQPAPAAAPAARPTLGTLARHLRILAASPERWWGLVRFDPDRSVSVQVEDRPE
Ga0318510_103183341	3300032064	Soil	MSVAPEIAILAGASPAGAAAARPTLGTLARQLRMLAASPERWWGLVRFDP
Ga0318510_105542671	3300032064	Soil	MSVAPEIAILAEGSLFGPAQPTLGTLARRLRMLATAPERWWGLVRFDPDRSVLIEVENRPEYRAW
Ga0318524_105707911	3300032067	Soil	MKDFPLIADMSAAPEIARLAGAVLLVPAQPASRPPQVLQVTLGTLAGRLRMLAATPERWWGLVRFEPDRSVKIKVEDQPEYEAWL
Ga0306924_103510361	3300032076	Soil	MTAELISEMSVAPEIAVLAGSSLLVPAQPAPAAAPAARPTLGTLARHLRILAASPERWWGLVRFDPDRSVRVQVEDRPEYCAWL
Ga0306920_1012125072	3300032261	Soil	LTAELTSELTAELATEMSAAPEIAILAAAVLAVPAQPRPAQHVAAHPLTQVTLGTLARRLRMLAATPERWWELVRFDPGRSVKIEVEDQPEYGAWLMVLPP
Ga0335080_103341531	3300032828	Soil	MLAGATMLISAPPMRTGTPGQEGARPTLGTLARQLRLLAAAPERWWGLVRFDPDRSVRIPVEDRPEYRAWLVVLPPAQARQQS
Ga0335072_109164581	3300032898	Soil	MTAELTAELTAGMSAAPEIAILAGASLLIPAQPTRAATPGTRPTLGTLARHLRILAASPERWWGQVRFDPDRSVRIEIEDQPE
Ga0335073_109323612	3300033134	Soil	MSVAPEIAILAGPSLLIATPPMRAGTPGPEGARPTLGTLARELRLLAAAPERWWGLVRFDPERSVRIEVEDRPEYRTWLVVLPP
Ga0318519_103511951	3300033290	Soil	MSVAPEIAILAEGSLFGPAQPTLGTLARRLRMLATAPERWWGLVRFDPD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063882

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences