Metagenome / Metatranscriptome Family F063877

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063877
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	71 residues
Representative Sequence	MPTSPRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYKVKWTTGLGYRDRITTVTADAVRKKLSPPDRSRS
Number of Associated Samples	109
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	33.33 %
% of genes near scaffold ends (potentially truncated)	22.48 %
% of genes from short scaffolds (< 2000 bps)	79.84 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.248 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.380 % of family members)
Environment Ontology (ENVO)	Unclassified (24.806 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (39.535 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 25.25% Coil/Unstructured: 74.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF02313	Fumarate_red_D	17.83
PF09723	Zn-ribbon_8	13.18
PF02300	Fumarate_red_C	7.75
PF08734	GYD	3.88
PF00582	Usp	2.33
PF08239	SH3_3	2.33
PF13183	Fer4_8	2.33
PF07366	SnoaL	1.55
PF00067	p450	1.55
PF01554	MatE	0.78
PF02910	Succ_DH_flav_C	0.78
PF01039	Carboxyl_trans	0.78
PF00005	ABC_tran	0.78
PF01425	Amidase	0.78
PF01979	Amidohydro_1	0.78
PF14833	NAD_binding_11	0.78
PF00496	SBP_bac_5	0.78
PF07237	DUF1428	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG3080	Fumarate reductase subunit D	Energy production and conversion [C]	17.83
COG3029	Fumarate reductase subunit C	Energy production and conversion [C]	7.75
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	3.88
COG2124	Cytochrome P450	Defense mechanisms [V]	1.55
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.78
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	0.78
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.78
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	0.78
COG5507	Uncharacterized conserved protein YbaA, DUF1428 family	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.25 %
Unclassified	root	N/A	7.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.25 %
Unclassified	root	N/A	7.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.25 %
Unclassified	root	N/A	7.75 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	44.96 %
Unclassified	root	N/A	7.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.65 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.33 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	44.96 %
Unclassified	root	N/A	7.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.55 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	42.64 %
Unclassified	root	N/A	7.75 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	2.33 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.55 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	42.64 %
Unclassified	root	N/A	7.75 %
unclassified candidate division NC10	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10	2.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.55 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.78 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	42.64 %
Unclassified	root	N/A	7.75 %
candidate division NC10 bacterium CSP1-5	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	2.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.55 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.78 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_105334560	All Organisms → cellular organisms → Bacteria	3264	Open in IMG/M
3300002914\|JGI25617J43924_10094079	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300005294\|Ga0065705_11163941	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	509	Open in IMG/M
3300005365\|Ga0070688_101667973	Not Available	521	Open in IMG/M
3300005440\|Ga0070705_100776454	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	760	Open in IMG/M
3300005444\|Ga0070694_101536976	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	564	Open in IMG/M
3300005445\|Ga0070708_100014589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	6473	Open in IMG/M
3300005445\|Ga0070708_100057161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3472	Open in IMG/M
3300005467\|Ga0070706_100055540	All Organisms → cellular organisms → Bacteria	3655	Open in IMG/M
3300005467\|Ga0070706_100263877	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300005467\|Ga0070706_100692165	Not Available	945	Open in IMG/M
3300005468\|Ga0070707_100286842	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300005468\|Ga0070707_101016138	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	795	Open in IMG/M
3300005471\|Ga0070698_101464992	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	634	Open in IMG/M
3300005536\|Ga0070697_100323459	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1328	Open in IMG/M
3300005536\|Ga0070697_100508845	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1053	Open in IMG/M
3300005536\|Ga0070697_101152305	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	691	Open in IMG/M
3300005829\|Ga0074479_11018787	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	676	Open in IMG/M
3300006176\|Ga0070765_100400510	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	1281	Open in IMG/M
3300006852\|Ga0075433_10216749	All Organisms → cellular organisms → Bacteria	1701	Open in IMG/M
3300006871\|Ga0075434_100093258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3014	Open in IMG/M
3300007076\|Ga0075435_100770528	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	837	Open in IMG/M
3300007255\|Ga0099791_10000441	All Organisms → cellular organisms → Bacteria	15397	Open in IMG/M
3300007258\|Ga0099793_10639705	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	534	Open in IMG/M
3300007265\|Ga0099794_10001892	All Organisms → cellular organisms → Bacteria	7502	Open in IMG/M
3300007265\|Ga0099794_10114140	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	1355	Open in IMG/M
3300009038\|Ga0099829_10003100	All Organisms → cellular organisms → Bacteria	9683	Open in IMG/M
3300009088\|Ga0099830_10503214	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	988	Open in IMG/M
3300009089\|Ga0099828_11118937	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	700	Open in IMG/M
3300009553\|Ga0105249_12614348	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	577	Open in IMG/M
3300009795\|Ga0105059_1060982	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	524	Open in IMG/M
3300009803\|Ga0105065_1007530	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1079	Open in IMG/M
3300009813\|Ga0105057_1039511	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	750	Open in IMG/M
3300009814\|Ga0105082_1052143	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	694	Open in IMG/M
3300009816\|Ga0105076_1090326	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300009820\|Ga0105085_1134505	Not Available	504	Open in IMG/M
3300010359\|Ga0126376_10016099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4785	Open in IMG/M
3300010360\|Ga0126372_10101988	All Organisms → cellular organisms → Bacteria	2161	Open in IMG/M
3300011120\|Ga0150983_15862822	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1745	Open in IMG/M
3300012189\|Ga0137388_10430431	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1223	Open in IMG/M
3300012202\|Ga0137363_10733235	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	837	Open in IMG/M
3300012205\|Ga0137362_10203188	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300012205\|Ga0137362_10709162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300012225\|Ga0137434_1008998	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1111	Open in IMG/M
3300012361\|Ga0137360_11233955	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	647	Open in IMG/M
3300012362\|Ga0137361_10932639	Not Available	786	Open in IMG/M
3300012683\|Ga0137398_10790404	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	663	Open in IMG/M
3300012918\|Ga0137396_10671211	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	765	Open in IMG/M
3300012922\|Ga0137394_10631277	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300012929\|Ga0137404_10273096	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1458	Open in IMG/M
3300012930\|Ga0137407_10038486	All Organisms → cellular organisms → Bacteria → Proteobacteria	3799	Open in IMG/M
3300012931\|Ga0153915_11373430	All Organisms → cellular organisms → Bacteria → Acidobacteria	826	Open in IMG/M
3300014873\|Ga0180066_1062551	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	747	Open in IMG/M
3300014884\|Ga0180104_1053041	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300015170\|Ga0120098_1010435	All Organisms → cellular organisms → Bacteria → Proteobacteria	1011	Open in IMG/M
3300015252\|Ga0180075_1096101	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	527	Open in IMG/M
3300017997\|Ga0184610_1005344	All Organisms → cellular organisms → Bacteria	3042	Open in IMG/M
3300018028\|Ga0184608_10165498	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300018031\|Ga0184634_10082583	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300018052\|Ga0184638_1089459	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300018053\|Ga0184626_10191762	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	867	Open in IMG/M
3300018054\|Ga0184621_10049929	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300018063\|Ga0184637_10201039	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300018068\|Ga0184636_1194095	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	719	Open in IMG/M
3300018074\|Ga0184640_10078589	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300018078\|Ga0184612_10081167	All Organisms → cellular organisms → Bacteria → Proteobacteria	1693	Open in IMG/M
3300018079\|Ga0184627_10188846	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1090	Open in IMG/M
3300018082\|Ga0184639_10327490	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300018084\|Ga0184629_10183127	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300018422\|Ga0190265_10001106	All Organisms → cellular organisms → Bacteria	17586	Open in IMG/M
3300018422\|Ga0190265_10396903	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300018429\|Ga0190272_10054567	All Organisms → cellular organisms → Bacteria	2335	Open in IMG/M
3300019249\|Ga0184648_1521709	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	761	Open in IMG/M
3300019259\|Ga0184646_1063982	All Organisms → cellular organisms → Bacteria	3208	Open in IMG/M
3300019360\|Ga0187894_10077199	All Organisms → cellular organisms → Bacteria	1842	Open in IMG/M
3300019458\|Ga0187892_10005320	All Organisms → cellular organisms → Bacteria	20355	Open in IMG/M
3300019458\|Ga0187892_10084819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1952	Open in IMG/M
3300019879\|Ga0193723_1033762	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1536	Open in IMG/M
3300019879\|Ga0193723_1078658	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	947	Open in IMG/M
3300019886\|Ga0193727_1055892	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1259	Open in IMG/M
3300020060\|Ga0193717_1148765	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	690	Open in IMG/M
3300020579\|Ga0210407_10423952	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300021086\|Ga0179596_10242038	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	889	Open in IMG/M
3300021088\|Ga0210404_10253690	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	957	Open in IMG/M
3300021170\|Ga0210400_10046495	All Organisms → cellular organisms → Bacteria	3377	Open in IMG/M
3300021178\|Ga0210408_10240144	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300021432\|Ga0210384_10005210	All Organisms → cellular organisms → Bacteria	14261	Open in IMG/M
3300021432\|Ga0210384_10020469	All Organisms → cellular organisms → Bacteria	6374	Open in IMG/M
3300021432\|Ga0210384_11826654	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	513	Open in IMG/M
3300022531\|Ga0242660_1026515	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1137	Open in IMG/M
3300022694\|Ga0222623_10234723	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	709	Open in IMG/M
3300025165\|Ga0209108_10107476	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300025324\|Ga0209640_10063081	All Organisms → cellular organisms → Bacteria	3208	Open in IMG/M
3300025324\|Ga0209640_10107243	All Organisms → cellular organisms → Bacteria	2406	Open in IMG/M
3300025910\|Ga0207684_10139776	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2081	Open in IMG/M
3300025910\|Ga0207684_10230223	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	1599	Open in IMG/M
3300025922\|Ga0207646_10128138	All Organisms → cellular organisms → Bacteria	2283	Open in IMG/M
3300025922\|Ga0207646_11299035	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	635	Open in IMG/M
3300026359\|Ga0257163_1005441	All Organisms → cellular organisms → Bacteria	1827	Open in IMG/M
3300026361\|Ga0257176_1022796	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	913	Open in IMG/M
3300026494\|Ga0257159_1005145	All Organisms → cellular organisms → Bacteria	1920	Open in IMG/M
3300026508\|Ga0257161_1035767	Not Available	984	Open in IMG/M
3300026514\|Ga0257168_1009443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1819	Open in IMG/M
3300026514\|Ga0257168_1031928	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300026535\|Ga0256867_10040534	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1916	Open in IMG/M
3300026551\|Ga0209648_10078745	All Organisms → cellular organisms → Bacteria	2755	Open in IMG/M
3300027511\|Ga0209843_1018724	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1356	Open in IMG/M
3300027655\|Ga0209388_1000115	All Organisms → cellular organisms → Bacteria	14836	Open in IMG/M
3300027671\|Ga0209588_1135382	Not Available	785	Open in IMG/M
3300027671\|Ga0209588_1170881	Not Available	684	Open in IMG/M
3300027846\|Ga0209180_10626529	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	592	Open in IMG/M
3300027862\|Ga0209701_10105814	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300027862\|Ga0209701_10645304	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	554	Open in IMG/M
3300027915\|Ga0209069_10364676	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	783	Open in IMG/M
3300027947\|Ga0209868_1019507	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M
3300028047\|Ga0209526_10455387	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	841	Open in IMG/M
3300028673\|Ga0257175_1047358	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	782	Open in IMG/M
3300028792\|Ga0307504_10400212	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	540	Open in IMG/M
3300028803\|Ga0307281_10078626	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300030006\|Ga0299907_10220975	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300030619\|Ga0268386_10497399	Not Available	835	Open in IMG/M
3300030620\|Ga0302046_10308407	Not Available	1301	Open in IMG/M
3300031057\|Ga0170834_110681771	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	673	Open in IMG/M
3300031229\|Ga0299913_11808309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	559	Open in IMG/M
3300031231\|Ga0170824_122788394	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	652	Open in IMG/M
3300031820\|Ga0307473_10230176	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1122	Open in IMG/M
3300031949\|Ga0214473_10109015	All Organisms → cellular organisms → Bacteria	3233	Open in IMG/M
3300031949\|Ga0214473_11003761	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300032180\|Ga0307471_102403305	Not Available	666	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.90%
Host-Associated	Host-Associated	3.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.07%
Aquatic	Environmental → Aquatic	17.83%
Plants	Host-Associated → Plants	3.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.74%
Sediment	Environmental → Aquatic → Sediment	15.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.10%
Freshwater	Environmental → Aquatic → Freshwater	2.33%
Cave	Environmental → Terrestrial → Cave	2.33%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.94%
Loam	Environmental → Terrestrial → Soil → Loam	17.83%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	15.50%
Sand	Environmental → Terrestrial → Soil → Sand	6.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.10%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	2.33%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.78%
Fossil	Environmental → Terrestrial → Soil → Fossil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	15.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.95%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	6.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.33%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.33%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Soil → Fossil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	13.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	10.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.08%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	6.20%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.33%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.55%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	1.55%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.78%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Fossill	Environmental → Terrestrial → Soil → Fossil → Unclassified → Fossill	0.78%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009795	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50	Environmental	Open in IMG/M
3300009803	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50	Environmental	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009820	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012225	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT860_2	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015170	Fossil microbial communities from human bone sample from Teposcolula Yucundaa, Mexico - TP48	Environmental	Open in IMG/M
3300015252	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10D	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018068	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027947	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1053345605	3300000956	Soil	MRTMSTAPTPGLRAGDVVVLRESRDYVEGEVITVLSENRYKVKWTSGFDYRDRVTTVTADEVRKKLYRTTGNRGGS*
JGI25617J43924_100940791	3300002914	Grasslands Soil	VTATMPTSPRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYRVKWTTGLGYRDRITTVTADAVRKKMSPPDRSRS*
Ga0065705_111639412	3300005294	Switchgrass Rhizosphere	MRTMPTPPRPRPRAGDVVVLRESVECVEGEVIAVLAEGRYKVKWTIGLGYRDRVTSVTADEIRKKPSR
Ga0070688_1016679731	3300005365	Switchgrass Rhizosphere	LTMPTSPRPRLRAADVVVQRGNAEYIEGEVIAMLAEGPYRVKWTMGFGCRDPISTVTADVVRKKLSSRDSSRS*
Ga0070705_1007764542	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MPTSPRPRLRAGDVVVLRGNAEYIEGEVIAVLAEGRYRVKWTMGLGYRDRITPVTADAVRKKLSSPDNSRS*
Ga0070694_1015369763	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	RAGDVVVLRESVECVEGEVIAVLAEGRYKVKWTIGLGYRDRVTSVTADEIRKKPSRGIS*
Ga0070708_1000145898	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTPTVSTPPRPRLRAGDVVVLRGSEEYVEGEVIAVLAEGRYKVKWTTGLGYRDRVTSVAADEIRMKPSFH*
Ga0070708_1000571616	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTATMPTSPRPRLRAGDVVVLHGNAEYIEGEVIAVLAEAEYRVKWTTGLGYRDRITTVTADAVRKKLSPPDRSRS*
Ga0070706_1000555405	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VTLLPMPTSSSPRLRAGDVVVLRGNAEYIEGEVIAVQAEGRYRVKWTVGLGDRDRITTVTADVVRKKRPDSSRS*
Ga0070706_1002638774	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VTATMPTSPRPRLRAGDVVILRGNAEYIEGEVIAVLAEAGYRVKWTTGLGYRDRITTVTADAVRKKLSLPDRSRS*
Ga0070706_1006921652	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	GHPRRGRSLRAGASVTATMPTSPRPRLRAGDVVVLHGNAEYIEGEVIAVLAEAEYRVKWTTGLGYRDRITTVTADAVRKKLSPPDRSRS*
Ga0070707_1002868422	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VTLLPLRTSSSPRLRAGDVVVLRGNAEYIEGEVIAVQAEGRYRVKWTVGLGDRDRITTVTADVVRKKRPDSSRS*
Ga0070707_1010161382	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VTATMPTSPRPRLRAGDVVVLHGNAEYIEGEVIAVLAEAEYRVKWTTGLGYRDRITTVTADAVRKKVSPPDRSRS*
Ga0070698_1014649922	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRTVPTPPRPGPRAGDVVVLRENVECVEGEVIAVLAEGRYKVKWTIGLGYRDRVTFATADEIRKKPSRGIS*
Ga0070697_1003234592	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLTMPTSPRPRLRAGDVVVLRGNAEYIEGEVIAVLAEGRYRVKWTMGLGYRDRITPVTADAVRKKLSSPDNSRS*
Ga0070697_1005088452	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VTLLPMRTSSSPRLRGGDVVVLRGNAEYIEGEVIAVQAEGRSRVKWTVGLGYRDRITTVTADVVRKKLPDSSRS*
Ga0070697_1011523052	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VTATMPTSPRPRLGAGDVVVLHGNAEYIEGEVIAVLAEAEYRVKWTTGLGYRDRITTVTADAVRKKLSPPDRSRS*
Ga0074479_110187872	3300005829	Sediment (Intertidal)	VSPSTPPPSRLRAGDVVVLRASQEYIVGEIIAVLAESRYKVKWTTGLGYRDRVTTVTADVVRKKP*
Ga0070765_1004005104	3300006176	Soil	MPTSSSPRLRAGDVVVLRGNAEYIEGEVIAVQAEGRYRVKWTVGLGYRDRITTVTADVVRKKLPDSSRS*
Ga0075433_102167492	3300006852	Populus Rhizosphere	MRTMPTAPDPRLRAGDVVVLRESQEYVEGEVITVLSESRYKVKWTLGLGYRDRVTTVAADQVRKKL*
Ga0075434_1000932584	3300006871	Populus Rhizosphere	MRTMSTAPDPRLRAGDVVVLRESQEYVEGEVITVLSESRYKVKWTLGLGYRDRVTTVAADQVRKKL*
Ga0075435_1007705282	3300007076	Populus Rhizosphere	VTLTMPTSPRPRLDPVMLSSCAGPGIIEGEVIAMLAEGRYRVKWTRGLSYRDRITPVTADAVRKKLSSPDNSRS*
Ga0099791_1000044111	3300007255	Vadose Zone Soil	VTPTMPTSSRTRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYKVKWTTGLGYRDRITTVTADAVRKKLSLPDRSRS*
Ga0099793_106397052	3300007258	Vadose Zone Soil	MPTSSRTRLRAGDVVVLRGNAEYIEGEVIGVLAEAGYKVKWTTGLGYRDRITTVTADAVRKKLSLPDRSRS*
Ga0099794_100018926	3300007265	Vadose Zone Soil	MPTSSRTRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYKVKWTTGLGYRDRITTVTADAVRKKLSLPDRSRS*
Ga0099794_101141403	3300007265	Vadose Zone Soil	MPTSPRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYRVKWTTGLGYRDRITTVTADAVRKKMSPPDRSRS*
Ga0099829_100031008	3300009038	Vadose Zone Soil	MRTMSTPPRPSPRAGDVVVLRGSDEYVEGEVIAVLADGRYKVRWTTGLAYRDRVTTATADEIRKKPSPGIY*
Ga0099830_105032142	3300009088	Vadose Zone Soil	MTTSTPPRPRLRAGDVVVRRGSGEYVEGEVIAVLAEGRYKVKWTTGLAYRDRVTTVTADEIRKKLSVGIQ*
Ga0099828_111189372	3300009089	Vadose Zone Soil	MPTSPRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYKVKWTTGLGYRDRITIVTADAVRKKLSPPDRSRS*
Ga0105249_126143481	3300009553	Switchgrass Rhizosphere	RPRPPPRPGPRAGDVVVLRENVECVEGEVIAVLAEGRYKVKWTIGLGYRDRVTFATADEIRKKPSRGIS*
Ga0105059_10609822	3300009795	Groundwater Sand	VTLIMPTPPRPRARAGDVVVLLGREEYVEGEVIAALADGRYKVKWMTGLGYRDRVTTVTADEVRKKP*
Ga0105065_10075302	3300009803	Groundwater Sand	VTLIMLTPPRPRARAGDVVVLLGREEYVEGEVIAALADGRYKVKWMTGLGYRDRVTTVTADEVRKKP*
Ga0105057_10395113	3300009813	Groundwater Sand	VTLVRPTPPRPRPRAGDVVVLLGSEEHIEGEIIAALADGRYKVKWMTGLGYRDRVTTVTADEVRKKP*
Ga0105082_10521431	3300009814	Groundwater Sand	SPRAGAPVTLIMPTPPRPRARAGDVVVLLGREEYVEGEVIAALADGRYKVKWMTGLGYRDRVTTVTADEVRKKP*
Ga0105076_10903263	3300009816	Groundwater Sand	PTPPRPRPRAGDVVVLLGSEEHIEGEIIAALADGRYKVKWTTGLGYRDRITTVTADEIGKKP*
Ga0105085_11345052	3300009820	Groundwater Sand	RSPRAGAPVTLIMPTPPRPRARAGDVVVLLGREEYVEGEVIAALADGRYKVKWMTGLGYRDRVTTVTADEVRKKP*
Ga0126376_100160993	3300010359	Tropical Forest Soil	MRTMPAAPGPRLRAGDVVVLREGHEHIEGEVIAVLGESRYKVRWTSGLNYRDRVTTVTADQVRKKG*
Ga0126372_101019883	3300010360	Tropical Forest Soil	MRTMPAAPGPRLRAGDVVVLREGQEHVEGEVIAVLADSRYKVRWTSGLDYRDRVTTVTADQVRKKG*
Ga0150983_158628224	3300011120	Forest Soil	VTLLPIPTSSSPRLRAGDVVVLRGNAEYIEGEVIAVQAEGRYRVKWTVGLGYRDRISTVTADVVRKKLPDSSRS*
Ga0137388_104304312	3300012189	Vadose Zone Soil	VTPTMPTSSRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYKVKWTTGLGYRDRITTVTADAVRKKLSLPDRSRS*
Ga0137363_107332352	3300012202	Vadose Zone Soil	MTATMPTSPRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYRVKWTTGLGYRDRITTVTADAVRKKLSLPDRSRS*
Ga0137362_102031885	3300012205	Vadose Zone Soil	MPTSSRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYKVKWTTGLGYRDRITTVTADAVRKKLSLPDRSRS*
Ga0137362_107091621	3300012205	Vadose Zone Soil	RAGDVVVLRGNAECIEGEVIAVLAEAGYRLKWTTGLGDRDRITTVTADAVRKKMSPPDRSRS*
Ga0137434_10089982	3300012225	Soil	VTRTTPPRPSPRAGDVVVLRGSEEYVEGEVIAVLAEGRYKVRWTTGLGYRDRVTTATADEIRKKPSPGSPN*
Ga0137360_112339552	3300012361	Vadose Zone Soil	MTATMPTSPRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYRVKWTTGLGYRDRITTVTADAVRKKLSPPDRSRS*
Ga0137361_109326391	3300012362	Vadose Zone Soil	RPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYRVKWTTGLGYRDRITTVTADAVRKKLSPPDRSRS*
Ga0137398_107904042	3300012683	Vadose Zone Soil	VTATMPTSPRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYRVKWTTGLGYRDRITTVTADAVRKKLSPPDRSRS*
Ga0137396_106712112	3300012918	Vadose Zone Soil	MPTSPRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYKVKWTTGLGYRDRITTVTADAVRKKLSPPDRSRS*
Ga0137394_106312773	3300012922	Vadose Zone Soil	MSIPPRPSPRAGDVVVLRASEEYVEGEVIAVLAGGRYKVKWTIGLGYRDRVTSVTADEIRKKPSRGIS*
Ga0137404_102730962	3300012929	Vadose Zone Soil	MRTVPTPPRPGPRAGDVVVLRESVECVEGEVIAVLAEGRYKVKWTIGLGYRDRVTSVTADEIRKKPSRGIS*
Ga0137407_100384864	3300012930	Vadose Zone Soil	MRTVPTPPRPGPRAGDVVVLRESVECVEGEVIAVLAEGRYKVKWTIGLGCRDRVTSVTADEIRKKPSRGIS*
Ga0153915_113734301	3300012931	Freshwater Wetlands	SASTPPHSSLRTGDVVVLRASQEYIVGEIIAVLAESRYKVKWTTGLGYRDRVTIVTADEVRKKP*
Ga0180066_10625512	3300014873	Soil	MRTMPTPPRPSPRAGDVVVLRGSEEYVEGEVIAVLAEGRYKVRWTTGLAYHDRVTTATADEIRKKPSPGIR*
Ga0180104_10530412	3300014884	Soil	MSTPPRPSPRAGDVVVLRGSEEYVEGEVIAVLAEGRYKVRWTTGLAYRDRVTTATADEIRKKPSPGSTN*
Ga0120098_10104353	3300015170	Fossill	LRAGDVVVLRGSEEYVEGDVIAVLAEGRYKVKWTTGLGYRDRVTSVTAEEIRKKPSRGIP
Ga0180075_10961012	3300015252	Soil	MRTMPTPPRPSPRAGDVVVLRGSEEYVEGEVIAVLAEGRYKVRWTSGLADHDRVTTATADEIRKKPSPGIR*
Ga0184610_10053445	3300017997	Groundwater Sediment	MSIPPRPSPRAGDVVVLRGSEEYVEGEVIAVLAEGRYKVRWTTGLAYRDRVTTATADEIRKKPSPGSTN
Ga0184608_101654981	3300018028	Groundwater Sediment	MRTMSTPPRPSPRAGDVVVLRGSEEYVEGEVIAVLADGRYKVRWTTGLAYRDRVTTATADEIRKKPSPGSTN
Ga0184634_100825832	3300018031	Groundwater Sediment	MSTPPRPSPRAGDVVVLRGSDEYVEGEVIAVLADGRYKVRWTTGLAYRDRVTTATADEIRKKPSPGIY
Ga0184638_10894593	3300018052	Groundwater Sediment	MTRTMSTPPRPSPRAGDVVVLRGSEEYVEGEVIAVLAEGRYKVRWTTGLAYRDRVTTATADEIRKKPSPGSTN
Ga0184626_101917623	3300018053	Groundwater Sediment	VTRTMSIPPRPSPRAGDVVVLRGSEEYVEGEVIAVLAEGRYKVRWTTGLAYRDRVTTATADEIRKKPSPGSTN
Ga0184621_100499294	3300018054	Groundwater Sediment	MRTMSTPPRPSPRAGDVVVLRGSEEYVEGEVIAVLAEGRYKVRWTTGLAYRDRVTTATADEIRKKPSPGSTN
Ga0184637_102010392	3300018063	Groundwater Sediment	MSTPPRPRLRAGDVVALIGGEEHVEGEIIAVMADGRYKVKWTIGLGYRDRVTTVTAGEIREKRLRP
Ga0184636_11940952	3300018068	Groundwater Sediment	MRTMPTPPRPSPRAGDVVVLRGSEEYVEGEVIAVLAEGRYKVRWTTGLAYHDRVTTATADEIRKKPSPGIR
Ga0184640_100785891	3300018074	Groundwater Sediment	MSTPPRPSPRAGDVVVLRGSEEYVEGEVIAVLAEGRYKVRWTTGLAYRDRVTTATADEIRKKPSPGIY
Ga0184612_100811671	3300018078	Groundwater Sediment	PPRPSPRAGDVVVLRGSEEYVEGEVIAVLAEGRYKVRWTTGLAYRDRVTTATADEIRKKPSPGSTN
Ga0184627_101888461	3300018079	Groundwater Sediment	MRTMSTPPRPGARAGDVVVLRGSEEYVEGEVIAVLAEGRYKVRWTTGLAYRDRVTTATADEIRKKPSPGIN
Ga0184639_103274903	3300018082	Groundwater Sediment	VTPTAPTPPRPRLRAGDVVVLRGSQEYIEGEVIAVLADTRYKVKWATGLSYRDRVTTVAA
Ga0184629_101831271	3300018084	Groundwater Sediment	MSTPPRPSPRAGDVVVLRGSDEYVEGEVIAVLADGRYKVRWTTGLAYRDRVTTATADEIRKKPSP
Ga0190265_1000110611	3300018422	Soil	MTMSTPPRPQLRAGDVVVLRGSEEYVEGDVIAVLAEGRYKVKWTTGLGYRDRVTSVTAEEIRKKPSRGIP
Ga0190265_103969034	3300018422	Soil	MPTPPRPRPRAGDVVVLLGSGEYVEGEVIAVLAEGRYKVRWLTGLAYRDRVTTVTADQIRKKRE
Ga0190272_100545675	3300018429	Soil	MSTPPRPSPRAGDVVVLRGSEEYVEGAVIAVLAEGRYKVRWTTGLAYRDRVTIATADEIRKKPSPGSTN
Ga0184648_15217092	3300019249	Groundwater Sediment	MRTMSTPPRPSPRAGDVVVLRGSEEYVEGEVIAVLAEGRYKVRWTTGLAYRDRVTTATADEIRKKPSPGIY
Ga0184646_10639826	3300019259	Groundwater Sediment	MSTPPRPSPRAGDVVVLRGSEEYVEGEVIAVLAEGRYKVRWTTGLAYRDRVTTATADEIRKKPSPGSTN
Ga0187894_100771993	3300019360	Microbial Mat On Rocks	MRTMPTAPRPSPRAGDVVVLRGSEEYVEGEVISVLAEGRYKVRWTTGLGYRDRVTTATADEIRKKPSRGSTN
Ga0187892_100053205	3300019458	Bio-Ooze	VTLTVPTPPRPRPRAGDVVVLLGSEEPIEGEVIAALADGRYKVKWTTGLGYRDRVTTVTADEIRKKP
Ga0187892_100848192	3300019458	Bio-Ooze	MRTMPTPPRPGPRAGDVVVLTESVEYVEGEVIAVLAEGRYKVRWTTGLAYRDRVTTATADEIRKKPSPGATN
Ga0193723_10337623	3300019879	Soil	VTPTMPTSPRPRLRAGDVVVLRGNAEYIEGEVITVLAEAGYRVKWTMGLGYRDRITTVTADAVRKKLSPPHRSRS
Ga0193723_10786582	3300019879	Soil	MRTMSTPPRPSPRAGDVVVLRGSDEYVEGEVIAVSADGRYKVRWTTGLAYRDRVTTATADEIRKKPSPGIY
Ga0193727_10558923	3300019886	Soil	MRTMSTPPRPSPRAGDVVVLRGSDEYVEGEVIAVLADGRYKVRWTTGLAYRDRVTTATADEIRKKPSPGIY
Ga0193717_11487652	3300020060	Soil	MSTPPRPSPRAGDVVVLRGSEEYVEGEVIAVLAEGRYKVRWTTGLGYRDRVTTATADEIRKKPSPGSTN
Ga0210407_104239523	3300020579	Soil	MPTSSSPRLRAGDVVVLRGNAEHIEGEVIAVQAEGRYRVKWTVGLGYRDRITTVTADVVRKKLPDSSRS
Ga0179596_102420382	3300021086	Vadose Zone Soil	VTATMPTSPRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYRVKWTTGLGYRDRITTVTADAVRKKMSPPDRSRS
Ga0210404_102536903	3300021088	Soil	VTLLPMPTSSSPRLRAGDVVVLRGNAEYIEGEVIAVQAEGRYRVKWTVGLGYRDRITTVTADVVRKKLPDSSRSVV
Ga0210400_100464954	3300021170	Soil	VTLLPIPTSSSPRLRAGDVVVLRGNAEYIEGEVIAVQAEGRYRVKWTVGLGYRDRITTVTADVVRKKLPDSSRS
Ga0210408_102401444	3300021178	Soil	VTLLPIPTSSSPRLRAGDVVVLRGNAEYIEGEVIAVQAEGRYRVKWTVGLGYRDRITTVTADVVRKKLPDSSRSVV
Ga0210384_1000521014	3300021432	Soil	VTATMPTSPRPRLRAGDVVILRGNAEYIEGEVIAVLAEAGYTVKWTTGLGYRDRITAVTADAVRKKLSPPDRSRS
Ga0210384_100204696	3300021432	Soil	VTLLPIPTSSSPRLRAGDVVVLRGNAEYIEGEVIAVQAEGRYRVKWTVGLGYRDRISTVTADVVRKKLPDSSRS
Ga0210384_118266542	3300021432	Soil	MPTSSRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYKVKWTTGLGYRDRITTVTADAVRKKLSLPDRSRS
Ga0242660_10265153	3300022531	Soil	MPTSSSPRLRAGDVVVLRGNAEYIEGEVIAVQAEGRYRVKWTVGLGYRDRITTVTADVVRKKLPDSSRSVV
Ga0222623_102347231	3300022694	Groundwater Sediment	MRTMSTPPRPSPRAGDVVVLRGSEEYVEGEVIAVLAEGRYKVRWTTGLAYRDRVTTATADEIRKEPSPGS
Ga0209108_101074762	3300025165	Soil	MSTPPRPRLRAGDVVVLLESEEYVEGEVIALLAEGRCKVKWTTGFGYRDRVTSVTEDEVRKKPPLKRS
Ga0209640_100630813	3300025324	Soil	MSTPPRPRLRAGDVVVLLESEEYVEGEVIALLAEGRCKVKWTTGFGYRDRVTSVTADEVRKKPPLKRS
Ga0209640_101072435	3300025324	Soil	MSTPPRPGLRAGDVVVLRGSEEYVAGEVIAVLAEDRYKVKWTTGFGYRDRVTSVMADEVR
Ga0207684_101397763	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTPTVSTPPRPRLRAGDVVVLRGSEEYVEGEVIAVLAEGRYKVKWTTGLGYRDRVTSVAADEIRMKPSFH
Ga0207684_102302232	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTATMPTSPRPRLRAGDVVVLHGNAEYIEGEVIAVLAEAEYRVKWTTGLGYRDRITTVTADAVRKKLSPPDRSRS
Ga0207646_101281385	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VTLLPLRTSSSPRLRAGDVVVLRGNAEYIEGEVIAVQAEGRYRVKWTVGLGDRDRITTVTADVVR
Ga0207646_112990352	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VTATMPTSPRPRLRAGDVVVLHGNAEYIEGEVIAVLAEAEYRVKWTTGLGYRDRITTVTADAVRKKVSPPDRSRS
Ga0257163_10054413	3300026359	Soil	MTATMPTSPRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYRVKWTTGLGYRDRITTVTADAVRKKLSPPDRSRS
Ga0257176_10227962	3300026361	Soil	VTPTMPTSSRTRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYKVKWTTGLGYRDRITTVTADAVRKKLSLPDRSRS
Ga0257159_10051451	3300026494	Soil	MPTSPRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYRVKWTTGLGYRDRITTVTADAVRKKMSPPDRSRS
Ga0257161_10357671	3300026508	Soil	RSLRAGASVTPTMPTSSRTRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYRVKWTTGLGYRDRITTVTADAVRKKLSPPDRSRS
Ga0257168_10094434	3300026514	Soil	TSSRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYRVKWTTGLGYRDRITTVTADAVRKKMSPPDRSRS
Ga0257168_10319283	3300026514	Soil	VTPTMPTSSRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYKVKWTTGLGYRDRITTVTADAVRKKLSLPDRSRS
Ga0256867_100405343	3300026535	Soil	VPTPPRPGLRAGDVVVLRGSPEYVEGEVIAVLADTRYKVKWGTGLGYRDRVTTVAADEVRKKS
Ga0209648_100787454	3300026551	Grasslands Soil	MPTSPRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYRVKWTTGLGYRDRITTVTADAVRKKLSPPDRSRS
Ga0209843_10187242	3300027511	Groundwater Sand	MPTPPRPRARAGDVVVLLGREEYVEGEVIAALADGRYKVKWMTGLGYRDRVTTVTADEVRKKP
Ga0209388_100011511	3300027655	Vadose Zone Soil	MPTSSRTRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYKVKWTTGLGYRDRITTVTADAVRKKLSLPDRSRS
Ga0209588_11353821	3300027671	Vadose Zone Soil	PAGHPRRGRSLRPGASVTATMPTSPRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYRVKWTTGLGYRDRITTVTADAVRKKMSPPDRSRS
Ga0209588_11708811	3300027671	Vadose Zone Soil	TRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYKVKWTTGLGYRDRITTVTADAVRKKLSLPDRSRS
Ga0209180_106265291	3300027846	Vadose Zone Soil	VTATMPTSPRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYKVKWTTGLGYRDRITTVTADAVRKKMSPPDRSRS
Ga0209701_101058141	3300027862	Vadose Zone Soil	VTPTMPTSSRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYRVKWTTGLGYRDRITTVTADAVRKKMSPPDRSRS
Ga0209701_106453042	3300027862	Vadose Zone Soil	MTTSTPPRPRLRAGDVVVRRGSGEYVEGEVIAVLAEGRYKVKWTTGLAYRDRVTTVTADEIRKKLSVGIQ
Ga0209069_103646762	3300027915	Watersheds	VTLLPMPTSSSPRLRAGDVVVLRANAEYIEGEVIAVQAEGRYRVKWTVGLGYRDRITTVTADVVRKKLPDSSRS
Ga0209868_10195072	3300027947	Groundwater Sand	VTLIMPTPPRPRARAGDVVVLLGREEYVEGEVIAALADGRYKVKWMTGLGYRDRVTTVTADEVRKKP
Ga0209526_104553872	3300028047	Forest Soil	VTLLPMPTSSSPRLRAGDVVVLRGNAEYIEGEVIAVRAEGRYRVKWTVGLGYRDRITTATADVVRKTLPDSSRS
Ga0257175_10473581	3300028673	Soil	VTATMPTSPRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAGYRVKWTTGLGYRDRITTVTADAVRKKLSPPDRSRS
Ga0307504_104002122	3300028792	Soil	RPAGRPRRGRSPRAGAPVKMTMSTSPRAGLRSGDVVVLRGSEEYVEGEVVAVLAGGGYKVKWTIGLGYRDRVTSVAADEIRKKPSG
Ga0307281_100786263	3300028803	Soil	MSTPPRPSPRAGDVVVLRGSDEYVEGEVIAVLAEGRYKVRWTTGLAYRDRVTTATADEIRKKPSPGIY
Ga0299907_102209751	3300030006	Soil	VKPTVPTPPRPGPRAGDVVVLRGSPEYVEGEVIAVLADTRYKVKWATGLGYRDRVTTVSADEVRKKS
Ga0268386_104973991	3300030619	Soil	PPRPGLRAGDVVVLRGSPEYVEGEVIAVLADTRYKVKWGTGLGYRDRVTTVAADEVRKKS
Ga0302046_103084073	3300030620	Soil	RPGLRAGDVVVLRGSPEYVEGEVIAVLADTRYKVKWATGLGYRDRVTTVSADEVRKKA
Ga0170834_1106817712	3300031057	Forest Soil	VTATMPTSPRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAEYRVKWTTGLGYRDRITTVTADAVRKKLSPPDRSRS
Ga0299913_118083092	3300031229	Soil	VKPTVPTPPRPGLRAGDVVVLRGSPEYVEGEVIAVLADTRYKVKWATGLGYRDRVTTVSADEVRKKA
Ga0170824_1227883942	3300031231	Forest Soil	MPTSPRPRLRAGDVVVLRGNAEYIEGEVIAVLAEAEYRVKWTTGLGYRDRITTVTADAVRKKLSPPDRSRS
Ga0307473_102301762	3300031820	Hardwood Forest Soil	VTLLPMRTSSSPRLRAGDVVVLRGNAEYIEGEVIAVQAEGRYRVKWTVGLGYRDRITTVTADVVRKKLPESSRS
Ga0214473_101090154	3300031949	Soil	PRLRAGDVVVLRGSEEYVEGEVIAVLAEGRYKVKWTIGLGYRDRVTSVTADEIHKKPSG
Ga0214473_110037613	3300031949	Soil	MRTMPTPPRPQFRAGDVVVLRGSEECVEGEVIAVLAEARYKVKWTIGLGYRDRVTAVTVDEIRKRPSRGISYREDVGG
Ga0307471_1024033052	3300032180	Hardwood Forest Soil	AGASVTLLPMPTSSSPRLRAGDVVVLRGNAEYIEGEVIAVQAEGRYRVKWTVGLGYRDRITTVTADVVRKKLPESSRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063877

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences