Metagenome / Metatranscriptome Family F063849

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063849
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	54 residues
Representative Sequence	VQLALDSLDRLVDTLEERGPLTAVEAARSLFATPSISQGLACSLLADVTAGD
Number of Associated Samples	119
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.65 %
% of genes near scaffold ends (potentially truncated)	99.22 %
% of genes from short scaffolds (< 2000 bps)	91.47 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.372 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.481 % of family members)
Environment Ontology (ENVO)	Unclassified (28.682 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.085 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.50% β-sheet: 0.00% Coil/Unstructured: 52.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF11799	IMS_C	69.77
PF00005	ABC_tran	5.43
PF07099	DUF1361	4.65
PF08402	TOBE_2	1.55
PF00929	RNase_T	0.78
PF08279	HTH_11	0.78
PF12697	Abhydrolase_6	0.78
PF04199	Cyclase	0.78
PF07287	AtuA	0.78
PF04909	Amidohydro_2	0.78
PF09844	DUF2071	0.78
PF04250	DUF429	0.78
PF13424	TPR_12	0.78
PF00817	IMS	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG4330	Uncharacterized membrane protein, DUF1361 domain	Function unknown [S]	4.65
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	0.78
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.78
COG2410	Predicted nuclease (RNAse H fold)	General function prediction only [R]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.37 %
Unclassified	root	N/A	11.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.37 %
Unclassified	root	N/A	11.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.37 %
Unclassified	root	N/A	11.63 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	75.97 %
Unclassified	root	N/A	11.63 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.88 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	75.19 %
Unclassified	root	N/A	11.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.33 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15.50 %
Unclassified	root	N/A	11.63 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	14.73 %
Unclassified	root	N/A	11.63 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.78 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.78 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.73 %
Unclassified	root	N/A	11.63 %
Rhodospirillales bacterium TMPK1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium TMPK1	0.78 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.78 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.73 %
Unclassified	root	N/A	11.63 %
unclassified Phenylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium	0.78 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Rhodospirillales bacterium TMPK1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium TMPK1	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.73 %
Unclassified	root	N/A	11.63 %
Phenylobacterium sp. J367	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. J367	0.78 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Rhodospirillales bacterium TMPK1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium TMPK1	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104946980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
3300004081\|Ga0063454_101872472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300004157\|Ga0062590_102244095	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005093\|Ga0062594_101924959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	628	Open in IMG/M
3300005172\|Ga0066683_10489493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	751	Open in IMG/M
3300005175\|Ga0066673_10611816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	633	Open in IMG/M
3300005187\|Ga0066675_10509699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	900	Open in IMG/M
3300005329\|Ga0070683_101488314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300005334\|Ga0068869_101854293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300005339\|Ga0070660_101463183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	581	Open in IMG/M
3300005355\|Ga0070671_100455369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1098	Open in IMG/M
3300005440\|Ga0070705_100009954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4745	Open in IMG/M
3300005454\|Ga0066687_10197485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1096	Open in IMG/M
3300005458\|Ga0070681_11198007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300005467\|Ga0070706_101420247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300005530\|Ga0070679_100590052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1054	Open in IMG/M
3300005536\|Ga0070697_101385724	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300005543\|Ga0070672_102090639	Not Available	510	Open in IMG/M
3300005549\|Ga0070704_100310486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1317	Open in IMG/M
3300005549\|Ga0070704_101873857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300005564\|Ga0070664_100669767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	965	Open in IMG/M
3300005616\|Ga0068852_102495970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300005719\|Ga0068861_100121729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2106	Open in IMG/M
3300005719\|Ga0068861_100293876	Not Available	1404	Open in IMG/M
3300005844\|Ga0068862_100650394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1017	Open in IMG/M
3300006031\|Ga0066651_10644324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300006046\|Ga0066652_100507043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1122	Open in IMG/M
3300006049\|Ga0075417_10009197	All Organisms → cellular organisms → Bacteria	3587	Open in IMG/M
3300006178\|Ga0075367_10944326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300006845\|Ga0075421_102120173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. J367	596	Open in IMG/M
3300006852\|Ga0075433_10994371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	731	Open in IMG/M
3300006871\|Ga0075434_101627308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	654	Open in IMG/M
3300006894\|Ga0079215_10666450	Not Available	695	Open in IMG/M
3300006903\|Ga0075426_10537738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	870	Open in IMG/M
3300007076\|Ga0075435_100084528	All Organisms → cellular organisms → Bacteria	2611	Open in IMG/M
3300009094\|Ga0111539_13389848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300009098\|Ga0105245_12473006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300009137\|Ga0066709_100303070	All Organisms → cellular organisms → Bacteria	2171	Open in IMG/M
3300009148\|Ga0105243_10153294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1979	Open in IMG/M
3300009148\|Ga0105243_12261431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	581	Open in IMG/M
3300009162\|Ga0075423_11993900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	628	Open in IMG/M
3300009553\|Ga0105249_11790277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	687	Open in IMG/M
3300009789\|Ga0126307_11645534	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300009814\|Ga0105082_1009541	Not Available	1357	Open in IMG/M
3300010029\|Ga0105074_1108055	Not Available	531	Open in IMG/M
3300010036\|Ga0126305_10351191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	965	Open in IMG/M
3300010301\|Ga0134070_10282527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	629	Open in IMG/M
3300010403\|Ga0134123_12256918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300011107\|Ga0151490_1832723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300011119\|Ga0105246_10995734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	758	Open in IMG/M
3300012159\|Ga0137344_1026304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	964	Open in IMG/M
3300012208\|Ga0137376_11759563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	510	Open in IMG/M
3300012209\|Ga0137379_11085525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	706	Open in IMG/M
3300012356\|Ga0137371_10112903	All Organisms → cellular organisms → Bacteria	2120	Open in IMG/M
3300012508\|Ga0157315_1043766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300012892\|Ga0157294_10146171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	653	Open in IMG/M
3300012897\|Ga0157285_10184086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	645	Open in IMG/M
3300012901\|Ga0157288_10117247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300012904\|Ga0157282_10151939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	706	Open in IMG/M
3300012951\|Ga0164300_11064287	Not Available	526	Open in IMG/M
3300012960\|Ga0164301_11747220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300012961\|Ga0164302_11170313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612	Open in IMG/M
3300012975\|Ga0134110_10622401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300012985\|Ga0164308_10899724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	780	Open in IMG/M
3300012989\|Ga0164305_10157054	Not Available	1551	Open in IMG/M
3300013308\|Ga0157375_10871275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1046	Open in IMG/M
3300014166\|Ga0134079_10022533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2047	Open in IMG/M
3300014166\|Ga0134079_10072388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1262	Open in IMG/M
3300015201\|Ga0173478_10034523	Not Available	1558	Open in IMG/M
3300015372\|Ga0132256_100141141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2404	Open in IMG/M
3300015373\|Ga0132257_100954400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1077	Open in IMG/M
3300017792\|Ga0163161_10328563	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300018000\|Ga0184604_10172718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	726	Open in IMG/M
3300018027\|Ga0184605_10081565	Not Available	1411	Open in IMG/M
3300018031\|Ga0184634_10568293	Not Available	500	Open in IMG/M
3300018073\|Ga0184624_10184215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	928	Open in IMG/M
3300018075\|Ga0184632_10164014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	980	Open in IMG/M
3300018078\|Ga0184612_10387207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300018081\|Ga0184625_10223826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	986	Open in IMG/M
3300018081\|Ga0184625_10541412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300018431\|Ga0066655_10448363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	852	Open in IMG/M
3300018468\|Ga0066662_10913480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	863	Open in IMG/M
3300019362\|Ga0173479_10240295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	790	Open in IMG/M
3300019767\|Ga0190267_10897659	Not Available	606	Open in IMG/M
3300020005\|Ga0193697_1132989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	568	Open in IMG/M
3300021078\|Ga0210381_10374594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	523	Open in IMG/M
3300021445\|Ga0182009_10338220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	766	Open in IMG/M
3300022756\|Ga0222622_11020622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300023073\|Ga0247744_1092154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300023263\|Ga0247800_1132182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300025899\|Ga0207642_10257650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	993	Open in IMG/M
3300025907\|Ga0207645_11040918	All Organisms → cellular organisms → Bacteria → Proteobacteria	553	Open in IMG/M
3300025935\|Ga0207709_10072062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2196	Open in IMG/M
3300025941\|Ga0207711_10821058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	866	Open in IMG/M
3300025949\|Ga0207667_10872458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	893	Open in IMG/M
3300025949\|Ga0207667_11121601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	769	Open in IMG/M
3300025960\|Ga0207651_10255551	Not Available	1436	Open in IMG/M
3300025972\|Ga0207668_10139939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1860	Open in IMG/M
3300025981\|Ga0207640_10505157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1007	Open in IMG/M
3300026325\|Ga0209152_10355720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300027561\|Ga0209887_1077254	All Organisms → cellular organisms → Bacteria → Terrabacteria group	688	Open in IMG/M
3300027907\|Ga0207428_10400539	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300028380\|Ga0268265_10990827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	830	Open in IMG/M
3300028381\|Ga0268264_10284857	Not Available	1549	Open in IMG/M
3300028592\|Ga0247822_11176880	All Organisms → cellular organisms → Bacteria → Proteobacteria	639	Open in IMG/M
3300028716\|Ga0307311_10122021	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300028719\|Ga0307301_10060885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1170	Open in IMG/M
3300028744\|Ga0307318_10084273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1067	Open in IMG/M
3300028768\|Ga0307280_10136427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	839	Open in IMG/M
3300028778\|Ga0307288_10043247	Not Available	1530	Open in IMG/M
3300028796\|Ga0307287_10037829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1741	Open in IMG/M
3300028796\|Ga0307287_10245723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	678	Open in IMG/M
3300028807\|Ga0307305_10213256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	886	Open in IMG/M
3300028814\|Ga0307302_10197255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	982	Open in IMG/M
3300028876\|Ga0307286_10109532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	974	Open in IMG/M
3300028878\|Ga0307278_10001110	All Organisms → cellular organisms → Bacteria	13363	Open in IMG/M
3300028881\|Ga0307277_10128427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1090	Open in IMG/M
3300028881\|Ga0307277_10296593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	717	Open in IMG/M
3300028884\|Ga0307308_10013239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3703	Open in IMG/M
3300028889\|Ga0247827_10046895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1957	Open in IMG/M
3300031716\|Ga0310813_11689772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300031716\|Ga0310813_12236351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	518	Open in IMG/M
3300031943\|Ga0310885_10329069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	797	Open in IMG/M
3300031996\|Ga0308176_10859011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium TMPK1	951	Open in IMG/M
3300032180\|Ga0307471_104133304	Not Available	513	Open in IMG/M
3300032205\|Ga0307472_100364823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1192	Open in IMG/M
3300032205\|Ga0307472_101843664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300032828\|Ga0335080_10771906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	996	Open in IMG/M
3300034113\|Ga0364937_065775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	698	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.99%
Host-Associated	Host-Associated	31.01%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.47%
Plants	Host-Associated → Plants	31.01%
Aquatic	Environmental → Aquatic	8.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.85%
Sediment	Environmental → Aquatic → Sediment	7.75%
Freshwater	Environmental → Aquatic → Freshwater	0.78%
Floodplain	Environmental → Terrestrial → Floodplain	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.18%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.75%
Loam	Environmental → Terrestrial → Soil → Loam	7.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.20%
Sand	Environmental → Terrestrial → Soil → Sand	2.33%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.20%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.10%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.33%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.33%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.33%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.33%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.33%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.55%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.55%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.78%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012508	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510	Host-Associated	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300034113	Sediment microbial communities from East River floodplain, Colorado, United States - 7_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1049469802	3300000364	Soil	VQLALDALDRLVETLEETGPLSTVEAARSLFATNSISEGLAASLLVDVTAGDS
Ga0063454_1018724722	3300004081	Soil	MQLALDSLDRLVDTLEERGPLTAVEAARSLFATPSISEGLASSLLGELTAGDS
Ga0062590_1022440952	3300004157	Soil	VQLALDSLDRLVELLEERGPLPAVEAARALFATPSVSEGLALSLLEEVTAGDSRV
Ga0062594_1019249591	3300005093	Soil	MFAYICWVQLALDALDRLVEILEERGSLSTVEAARALFATTSISNGLASSLLADVTAG
Ga0066683_104894932	3300005172	Soil	MFAFIWKVQLALDALDRLVDTLEERGTLSAVEAARSLFATASISDGLACSLLADVT
Ga0066673_106118161	3300005175	Soil	VQLALDALDRLVELLEERGPLSAMEAARTLFATPAISEGLACTLLADLTAGDSRL
Ga0066675_105096992	3300005187	Soil	MFAFIWKVQLALDALDRLVDTLEERGTLSVVDAARSLFATASISDGLACSLLADVTAGDS
Ga0070683_1014883142	3300005329	Corn Rhizosphere	VQLALDSLDRLVDTLEERGPLTAVEAARSLFATPSISEGLASSLLGELTAGDSRVAC
Ga0068869_1018542931	3300005334	Miscanthus Rhizosphere	MFALLCEMQLALDSLDRLVDTLEERGPLSAVDAARSLFATPSISEGLASSL
Ga0070660_1014631831	3300005339	Corn Rhizosphere	MFAFIWQVQLALDALDRLVDTLEERGTLTAVEAARSLFATTAISDGLAC
Ga0070671_1004553692	3300005355	Switchgrass Rhizosphere	MQLALDSLDRLVDTLEERGPLSAVDAARSLFATPSISEGLASSLLGE
Ga0070705_1000099545	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VQLALDALDRLVDTLEERGPLTAVEAARSLFATSSIPAGLATALIADVTAGDSRLVCDGA
Ga0066687_101974851	3300005454	Soil	VQLALDALDRLVELLEERGPLSAMEAARTLFATPAISEGLACTLLADLTAGDSRLLCAG
Ga0070681_111980072	3300005458	Corn Rhizosphere	VQLSLDALDRLVETLEERGPLTAVEAARSLFATSSIPSGLACSLLAE
Ga0070706_1014202471	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VQLALDSLDRLVDTLEERGPLTAVEAARSLFATPSISAGLASSLLGELTEGD
Ga0070679_1005900522	3300005530	Corn Rhizosphere	MQLALDSLDRLVDTLEERGPLSAVEAARSLFATPSISEGLASSLLGELTAGDSRVACF
Ga0070697_1013857241	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MFAFICGVQLALDALDRLVDTLEERGPLTAVEAARSLFATSSISDGLACSLLED
Ga0070672_1020906391	3300005543	Miscanthus Rhizosphere	MFAFISRVQLALDALDRLVEILEERGALSVVDAARALFATSSISDGLASSLIEEVIAGDSRVS
Ga0070704_1003104862	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VQLALDALDRLVDTLEERGTLTAVEAARSLFATTAISDGLACSLLADVTAGDSR
Ga0070704_1018738572	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MFAFIWQVQLALDALDRLVDTLEERGTLTAVEAARSLFATTAISDGLACSLLADVTAGDSRVV
Ga0070664_1006697671	3300005564	Corn Rhizosphere	MFAFISRVQLALDALDRLVEILEERGALTVVDAARALFATSSISDGLAASLIEE
Ga0068852_1024959702	3300005616	Corn Rhizosphere	MQLALDSLDRLVDTLEERGPLSAVEAARSLFATPSISEGLASSLLGELTAGDS
Ga0068861_1001217293	3300005719	Switchgrass Rhizosphere	VQLALDSLDRLVDTLEERGPLTAVEAARSLFATPSISAGLASSLLGELTE
Ga0068861_1002938761	3300005719	Switchgrass Rhizosphere	VVQLALDSLDRLVDTLEERGPLTVLEAARALFATTSIPDGLALSLLEE
Ga0068862_1006503942	3300005844	Switchgrass Rhizosphere	VQLALDSLDRLVETLEERGPLSASSAAGVLFATPSISEGLACSLLEE
Ga0066651_106443242	3300006031	Soil	MFAFICKVQLALDALDRLVDTLEERGTLSAVEAARSLFATASISDGLACSLL
Ga0066652_1005070432	3300006046	Soil	MQLALDALDRLVDTLEERGPLSAVEAARSLFATSSISTGLACSLLVEATAGDSRLV
Ga0075417_100091976	3300006049	Populus Rhizosphere	VQLALDALDRLVDILEERGPLPAVEAARSLFATSSISTGLACSLLDDITAGD
Ga0075367_109443263	3300006178	Populus Endosphere	VVQLALDALDRLVETLEERGPLSAVEAARSLFATAAISDGLACSLLT
Ga0075421_1021201731	3300006845	Populus Rhizosphere	VQLALDSLDRLVDTLEERGPLTAVEAARSLFATSSISQGLACSLLADVTAGDSRLVCA
Ga0075433_109943712	3300006852	Populus Rhizosphere	VQLALDALDRLVETLEERGALSTVEAARSLFATSSIPAGLATSLIADLTAGDSRLVC
Ga0075434_1016273081	3300006871	Populus Rhizosphere	MQLALDSLDRLVDTLEERGPLSAVDAARSLFATPSISEGLASSLLGEL
Ga0079215_106664502	3300006894	Agricultural Soil	VQLALDALDRLVETLEKRGSLSAVEAARALFATPSISAGLACSLLAEVTAGDSRIVCT
Ga0075426_105377382	3300006903	Populus Rhizosphere	VQLALDALDRLVETLEERGALSTVEAARSLFATSSIPAGLATSLIADVTA
Ga0075435_1000845284	3300007076	Populus Rhizosphere	VQLALDALDRLVDILEERGPLPAVEAARSLFATSSISTGLACSLLDDITA
Ga0111539_133898482	3300009094	Populus Rhizosphere	VQLALDALDRLVDILEERGPLPAVEAARSLFATSSISTGLACSLLDDIT
Ga0105245_124730062	3300009098	Miscanthus Rhizosphere	MFAFISRVQLALDALDRLVEILEERGALSVVDAARALFATSSISDGLASSLIEEVI
Ga0066709_1003030703	3300009137	Grasslands Soil	VQLALDALDRLVELLEERGPLSAMEAARTLFATPAISEGLACTLLADLTAGDS
Ga0105243_101532943	3300009148	Miscanthus Rhizosphere	MFAFICQVQLALDALDRLVDTLEERGTLTAVEAARSLFATTAISDGLACSLLADVT
Ga0105243_122614312	3300009148	Miscanthus Rhizosphere	VQLALDALDRLVDTLEERGTLTAVEAARSLFATTAISDGLACSLLADVTAGDSRVVCTG
Ga0075423_119939002	3300009162	Populus Rhizosphere	VQLALDALDRLVDILEERGPLPAVEAARSLFATSSISTGLACSLLDDITAGDS
Ga0105249_117902771	3300009553	Switchgrass Rhizosphere	VQLALDALDRLVDTLEERGPLTAVESARSLFATSSISDGLACSLLEDVTAGDSRLLCTG
Ga0126307_116455341	3300009789	Serpentine Soil	MFAFIYQVQLALDSLDRLVDTLEERGPLTAVEAARSLFATSSISDGLACSLLEEVTA
Ga0105082_10095412	3300009814	Groundwater Sand	MQLALDALDQLVDTLEERGSLSAVEAARQLFATSSISDGLACSLLA
Ga0105074_11080551	3300010029	Groundwater Sand	LALDGLDRLVDVLHEQGALSTVEAARLLFATGPISDGLACSLLTDVTRTR*
Ga0126305_103511912	3300010036	Serpentine Soil	VQLALDALDRLVEILEERGPLSIVDAARALFATPSISDGLAVSLIEM*
Ga0134070_102825271	3300010301	Grasslands Soil	MQLSLDALDRLVDTLEERGTLSAVEAARSLFASSSIPAGLASSLLADV
Ga0134123_122569181	3300010403	Terrestrial Soil	VQLALDALDRLVDTLEERGTLTAVEAARSLFATTAISDGLACSLLADVTAGDSRV
Ga0151490_18327231	3300011107	Soil	VQLALDSLDRLVDTLEQRGPLSVVEAARALFATRSIPDGLALSLLDEVTAGDSR
Ga0105246_109957341	3300011119	Miscanthus Rhizosphere	VQLALDSLDRLVDTLEERGPLTAVDAARSLFATPAISEGLACSLLDELTAGDSRVA
Ga0137344_10263042	3300012159	Soil	MFAFISEVQLALDSLDRLVETLEERGPLSASDAARALFATSSISDGLACSLLAEVTAGD
Ga0137376_117595632	3300012208	Vadose Zone Soil	MFAFMCEVQLALDALDRLVETLEERGSLSAVEAASSLFATSSIADGLAVSLLAEVTAGDSRL
Ga0137379_110855252	3300012209	Vadose Zone Soil	MFAFIWKVQLALDALDRLVDTLEERGTLSAVEAARSLFATASISDGLACSLLADVTAGDSRVVC
Ga0137371_101129034	3300012356	Vadose Zone Soil	MFAFIRRVQLALDALDRLVDTLEERGTLSAVEAARSLFATASISDGLACSLLADVT
Ga0157315_10437661	3300012508	Arabidopsis Rhizosphere	VQLSLDALDRLVETLEERGPLTAVEAARSLFATSSIPSGLACSLLAEVTAGDSR
Ga0157294_101461711	3300012892	Soil	MFAFISGVQLALDALDRLVEILEERGPLSVVEAARALFATSSISDGLAASLIEEVIAG
Ga0157285_101840862	3300012897	Soil	VQLALDSLDRLVETLEERGPLSASSAAGVLFATPSISEGLACSLLEEV
Ga0157288_101172471	3300012901	Soil	VQLALDALDRLVETLEETGPLSTVEAARSLFVTRSISEGLASSLLVDVTAGDSRVVCSG
Ga0157282_101519391	3300012904	Soil	MFAFISRVQLALDALDRLVEILEERGPLSVVEAARALFATSSISDGLAASLIEEVIA
Ga0164300_110642871	3300012951	Soil	VQLALDSLDRLVDTLEERGPLTAVEAARSLFATPSISAGLASSLLGELTEGDSRVACIG
Ga0164301_117472201	3300012960	Soil	VQLSLDSLDRLVDTLEERGPLTAVEAARSLFATPSISAGLASSLLGELTEGDS
Ga0164302_111703131	3300012961	Soil	MFALLWEMQLALDSLDRLVDTLEERGPLTAVEAARSLFATPAISEGLANSLLGELTAGDS
Ga0134110_106224011	3300012975	Grasslands Soil	VQLALDALDRLVDTLEERGSLSAVEAARSLFATSSISDGLASSLLTELTAGDSRVVCAGA
Ga0164308_108997242	3300012985	Soil	VQLALDALDRLVDTLEERGTLSVVEAARALFATSSIPDGLARSLLEE
Ga0164305_101570541	3300012989	Soil	VQLALDSLDRLVDTLEERGPLTAVEAARSLFATPTISEGLACSLLDELTAGDSRVACVG
Ga0157375_108712752	3300013308	Miscanthus Rhizosphere	MFAFISRVQLALDALDRLVEILEERGALTVVDAARALFATSSISDGLAASLI
Ga0134079_100225331	3300014166	Grasslands Soil	VQLALDALDRLVELLEESGPLSAMEAARTLFATPAISQGLACTLLAD
Ga0134079_100723881	3300014166	Grasslands Soil	MFAFIRWVQLALDALDRLVDILEERGPLPAVEAARSLFATPSVSTGLACSLLADITAGASMQALSRPRAS
Ga0173478_100345231	3300015201	Soil	VQLALDSLDRLVETLEERGPLSASSAAGVLFATPSISEGLACSLLEEVTAGDSRIVCAGA
Ga0132256_1001411411	3300015372	Arabidopsis Rhizosphere	MFAFIHRVQFALDSLDRLVDTLEERGTLSVVEAARALFATSSIPDGLARSLLEE
Ga0132257_1009544003	3300015373	Arabidopsis Rhizosphere	MFAFIPEVQLALDALDRLVETLEETGPLSTVEAARSLFATSSISEGLAASLLVDVT
Ga0163161_103285631	3300017792	Switchgrass Rhizosphere	MFAFICEVQLALDALDRLVDTLEERGPLTAVEAARSLFATSSISDGLACSLLEDVTAGDSRLL
Ga0184604_101727182	3300018000	Groundwater Sediment	VQLALDALDRLVDTLEERGSLSAQEAACSLFATSSISDGLACSLLADLTAGDSRL
Ga0184605_100815652	3300018027	Groundwater Sediment	MQLALDALDRLVEALEERGPLSAGEVASGLFASTSISDGLACSLLT
Ga0184634_105682932	3300018031	Groundwater Sediment	VQLALDSLDRLVEMLEERGPLTAVEAARSLFATSSISEGLACSLLADVTAGDSR
Ga0184624_101842151	3300018073	Groundwater Sediment	VQLALDSLDRLVDMLEERGPLTVLDAARALFATSSIPDGLALSLLEEVTAGDSRV
Ga0184632_101640141	3300018075	Groundwater Sediment	MFAFICLVQLALDALDRLVDTLEERGSLSAVEAARSLFATSSISDRLACSLLE
Ga0184612_103872072	3300018078	Groundwater Sediment	MFAFISEVQLALDSLDRLVETLEERGPLSASDAARALFATSSISDGLACSLLAEVTAGDS
Ga0184625_102238262	3300018081	Groundwater Sediment	VQLALDALDRLVDMLEERGPLSVVEAARALFATRSISDGLAASLIAEITAGDSRVACTG
Ga0184625_105414121	3300018081	Groundwater Sediment	MFAFICWVQLALDALDRLVDLLEERGPMPSVEAAQALFATSSISDGFARSLLEEVTA
Ga0066655_104483631	3300018431	Grasslands Soil	MFAFICEVQLALDALDRLVDTLEERGPLSTVEAARCLFATSSISTGLACSLLLE
Ga0066662_109134801	3300018468	Grasslands Soil	MFAFINGMQLALDALDRLVDTLEERGPLSAVEAARALFATPSISDGLACSLLAEATA
Ga0173479_102402952	3300019362	Soil	MFAFISGVQLALDSLDRLVETLEERGPLSAPDAARALFATSTISDGLARSLLA
Ga0190267_108976592	3300019767	Soil	MQLALDGLDRLVDVLHEQGTLSTVDAARLLFATGPISDGLACSLLTDI
Ga0193697_11329892	3300020005	Soil	MFAFIWEVQLALDSLDRLVDMLEERGPLSVVEAARALFATSSIPDGLA
Ga0210381_103745942	3300021078	Groundwater Sediment	MFAFIWQVQLALDALDRLVDTLEERGTLTAVEAARSLFATASISDGLACSLLAD
Ga0182009_103382201	3300021445	Soil	VQLALDALDRLVDILEERGPLPAVEAARSLFATSSISTGLACSLLNDITAGD
Ga0222622_110206222	3300022756	Groundwater Sediment	VQLALDSLDRLVDTLEERGPLSVVEAARALFATSSIPDGLACSLLE
Ga0247744_10921541	3300023073	Soil	VQLALDALDRLVETLEETGPLSTVEAARSLFATSSISEGLAASLLV
Ga0247800_11321822	3300023263	Soil	VQLALDSLDRLVDTLDERGPLTAVEAARSLFATPTISEGLATSLIGELTAGDSRVACIGG
Ga0207642_102576501	3300025899	Miscanthus Rhizosphere	VQLALDSLDRLVDTLEERGPLTAVEAARSLFATPSISAGLASSLLGELTEGDSRVACIA
Ga0207645_110409181	3300025907	Miscanthus Rhizosphere	LKYEHMFAFICGMQLALDALDRLVDTLEERGPLTAVEAARSLFATSSISDGLAC
Ga0207709_100720623	3300025935	Miscanthus Rhizosphere	VQLALDSLDRLVDTLEERGPLTAVEAARSLFATPSISEGLARSLLD
Ga0207711_108210581	3300025941	Switchgrass Rhizosphere	MQLALDSLDRLVDTLEERGPLSAVDAARSLFATPSISEGLASSLLGELTAGDSRVACFG
Ga0207667_108724581	3300025949	Corn Rhizosphere	VQLALDSLDRLVDTLEERGPLTAVEAARSLFATPSISAGLASSLLGELTEGDSR
Ga0207667_111216012	3300025949	Corn Rhizosphere	MFAFIWQVQLALDALDRLVDTLEERGTLTAVEAARSLFATTAISDGLACSLLADVTA
Ga0207651_102555511	3300025960	Switchgrass Rhizosphere	VQLALDSLDRLVDTLEERGPLTAVEAARSLFATPSISAGLASSLLGELTEGDS
Ga0207668_101399393	3300025972	Switchgrass Rhizosphere	VQLALDSLDRLVDTLEERGPLTAVEAARSLFATPSISAGLASSLLGELT
Ga0207640_105051572	3300025981	Corn Rhizosphere	MQLALDSLDRLVDTLEERGPLSAVEAARSLFATPSISEGLASSLLGE
Ga0209152_103557201	3300026325	Soil	VQLSLDALDRLVETLEERGPLTAVDAARSLFATPSIPAGLACSLLAEVTAGDARLSCSGA
Ga0209887_10772541	3300027561	Groundwater Sand	VQLALDALDRLVDTLEERGPLSVVEAARSLFASSSISEGLACSLLADVTAG
Ga0207428_104005391	3300027907	Populus Rhizosphere	VQLALDSLDRLVDTLEERGPLTAVEAARSLFATPSISQGLACSLLADVTAGD
Ga0268265_109908272	3300028380	Switchgrass Rhizosphere	VQLALDSLDRLVETLEERGPLSASSAAGVLFATPSISEGLACSLLEEVT
Ga0268264_102848571	3300028381	Switchgrass Rhizosphere	VQLALDSLDRLVDTLEERGPLTAVEAARSLFATPSISAGLASSLLVELT
Ga0247822_111768801	3300028592	Soil	MFAFICGVQLALDALDRLVDTLEERGPLTAVEAARSLFATSSISDGLACSLLE
Ga0307311_101220211	3300028716	Soil	MQLALDALDRLVDTLEERGPLTAVEAARSLFATSSISDGLACSLLEDVTAGDS
Ga0307301_100608851	3300028719	Soil	MQLALDALDRLVEMLEERGPLSAVEVASVLFASRSISDGLACSLLAQVIAGDGRLNLTGM
Ga0307318_100842732	3300028744	Soil	VQLALDALDRLVDTLEERGPLSASEAARSLFATSSISDGLACSLLADL
Ga0307280_101364272	3300028768	Soil	MFALIPGVQLALDALDRLVEAVEERGPLSAADAARSLFAASSIPQGLACSLLAEVTAG
Ga0307288_100432473	3300028778	Soil	MFALLWAVQLALDSLDRLVDTLEERGPLTAVEAARSLFATPSISEGLASSLLVE
Ga0307287_100378293	3300028796	Soil	VQLALDSLDRLVDTLEERGPLSVVDAARALFATNSIPDDLACSLLEEVTAGDSR
Ga0307287_102457231	3300028796	Soil	LKYEHTFAFICEVQLALDALDRLVDTLEERGPLTAVEAARSLFATSSISDGLAC
Ga0307305_102132562	3300028807	Soil	MQLALDALDRLVEALEERGPLSAGEVASGLFASTSISDGLACSLLTEVIAGDSR
Ga0307302_101972551	3300028814	Soil	MFAFICWVQLALDALDRLVDTLEERGPLTAVEAARSLFATSSISDGLA
Ga0307286_101095322	3300028876	Soil	MFAFIWKVQLALDALDRLVDTLEERGTLSAVEAARSLFATASISDGLACSLL
Ga0307278_1000111020	3300028878	Soil	MQLALDALDRLVETLEERGPLLVGEAASALFASESIPDGLACSLLTEVIAGDSRLTLSGTTV
Ga0307277_101284272	3300028881	Soil	MQLALDALDRLVEALEERGPLSAGEVASGLFASTSISDGLACSLLTEVIAGDSRLSLS
Ga0307277_102965932	3300028881	Soil	MFAFIWLVQLALDALDRLVDTLEERGPLSAAEAARSLFATSSISDGLA
Ga0307308_100132396	3300028884	Soil	MFAFIWQVQLALDALDRLVDTLEERGTLTAVEAARSLFATASISDGLACSLLADV
Ga0247827_100468955	3300028889	Soil	VQLALDALDRLVETLEETGPLSTVEAARSLFATSSISEGLAASLLVDVTAGDSRVV
Ga0310813_116897722	3300031716	Soil	VQLALDALDRLVETLEETGPLSTVEAARSLFASSSISEGLAASLLVDVTAGDRRV
Ga0310813_122363511	3300031716	Soil	MFAFIYSVQLALDSLDRLVDTLEERGSLTVVDAARALFATSSIPDGLA
Ga0310885_103290691	3300031943	Soil	VQLALDALDRLVDTLEERGTLSAVEAARSLFATASIPDGLACSLLAD
Ga0308176_108590111	3300031996	Soil	VQLALDSLDRLVELLEERGPLPAVDAARALFATPSVSEGLALSLLGEVTAGD
Ga0307471_1041333042	3300032180	Hardwood Forest Soil	MFAFIWEVQLALDSLDRLVDMLEERSPLTVLDAARALFATSSIPDGLALSLLEEVTA
Ga0307472_1003648231	3300032205	Hardwood Forest Soil	MFAFICGVQLALDALDRLVDTLEERGPLTAVEAARSLFATSSISDGLACSLLEDVTAGDS
Ga0307472_1018436642	3300032205	Hardwood Forest Soil	VQLSLDALDRLVETLEERGPLTAVEAARSLFATSSIPSGLACSLLAEV
Ga0335080_107719061	3300032828	Soil	MFAFICQVQLALDALDRLVDTLEERGPLSAVEAARSLFATPSISNGLACSLLVEATAGDSRLV
Ga0364937_065775_533_697	3300034113	Sediment	MFAFISEVQLALDSLDRLVETLEERGPLSASDAARALFATSSISDGLACSLLAEV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063849

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences