Metagenome / Metatranscriptome Family F063844

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063844
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	70 residues
Representative Sequence	MAFSLAPLLIHSEAVPVKAREALRAVTTAPVEQRKSALRSAARVLYSETSLDCGDAMELVGLQAGCGCD
Number of Associated Samples	86
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.53 %
% of genes near scaffold ends (potentially truncated)	35.66 %
% of genes from short scaffolds (< 2000 bps)	72.09 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.969 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.178 % of family members)
Environment Ontology (ENVO)	Unclassified (30.233 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.512 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.30% β-sheet: 0.00% Coil/Unstructured: 56.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF01638	HxlR	24.03
PF00202	Aminotran_3	11.63
PF00909	Ammonium_transp	10.85
PF00535	Glycos_transf_2	7.75
PF11790	Glyco_hydro_cc	6.98
PF13185	GAF_2	1.55
PF00069	Pkinase	0.78
PF00999	Na_H_Exchanger	0.78
PF08713	DNA_alkylation	0.78
PF13493	DUF4118	0.78
PF02517	Rce1-like	0.78
PF00849	PseudoU_synth_2	0.78
PF01137	RTC	0.78
PF00005	ABC_tran	0.78
PF17164	DUF5122	0.78
PF01594	AI-2E_transport	0.78
PF02627	CMD	0.78
PF00486	Trans_reg_C	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	24.03
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	10.85
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.10
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	0.78
COG4912	3-methyladenine DNA glycosylase AlkD	Replication, recombination and repair [L]	0.78
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.78
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.78
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.78
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.78
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.78
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.78
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.78
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	0.78
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.78
COG0430	RNA 3'-terminal phosphate cyclase	RNA processing and modification [A]	0.78
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.74 %
Unclassified	root	N/A	23.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.74 %
Unclassified	root	N/A	23.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.97 %
Unclassified	root	N/A	23.26 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.78 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	37.98 %
Unclassified	root	N/A	23.26 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	8.53 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.55 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.26 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	22.48 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8.53 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.55 %
archaeon BMS3Abin16	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon BMS3Abin16	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.26 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	22.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8.53 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	1.55 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.78 %
archaeon BMS3Abin16	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon BMS3Abin16	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.26 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	19.38 %
Kineosporiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales	1.55 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.55 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
archaeon BMS3Abin16	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon BMS3Abin16	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.26 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	9.30 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	2.33 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	1.55 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.55 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
archaeon BMS3Abin16	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon BMS3Abin16	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.26 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	9.30 %
Kineosporia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia	1.55 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	1.55 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.55 %
Sandaracinaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
archaeon BMS3Abin16	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon BMS3Abin16	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.26 %
unclassified Kofleriaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae	9.30 %
Kineosporia mesophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia → Kineosporia mesophila	1.55 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	1.55 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.55 %
Sandaracinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
archaeon BMS3Abin16	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon BMS3Abin16	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.26 %
Kofleriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	9.30 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	1.55 %
Kineosporia mesophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia → Kineosporia mesophila	1.55 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.55 %
unclassified Sandaracinus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → unclassified Sandaracinus	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
archaeon BMS3Abin16	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon BMS3Abin16	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.26 %
Kofleriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	9.30 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	1.55 %
Kineosporia mesophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia → Kineosporia mesophila	1.55 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.55 %
Sandaracinus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → unclassified Sandaracinus → Sandaracinus sp.	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
archaeon BMS3Abin16	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon BMS3Abin16	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0548708	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300003320\|rootH2_10024535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2489	Open in IMG/M
3300003320\|rootH2_10033719	All Organisms → cellular organisms → Bacteria	3424	Open in IMG/M
3300003320\|rootH2_10167815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5408	Open in IMG/M
3300003571\|Ga0007419J51692_1085968	Not Available	544	Open in IMG/M
3300005333\|Ga0070677_10009199	All Organisms → cellular organisms → Bacteria	3347	Open in IMG/M
3300005337\|Ga0070682_100024884	All Organisms → cellular organisms → Bacteria	3568	Open in IMG/M
3300005337\|Ga0070682_100867004	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	739	Open in IMG/M
3300005337\|Ga0070682_101846125	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	528	Open in IMG/M
3300005466\|Ga0070685_11435097	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	530	Open in IMG/M
3300005547\|Ga0070693_100324773	Not Available	1045	Open in IMG/M
3300005547\|Ga0070693_101441718	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	536	Open in IMG/M
3300005548\|Ga0070665_101655463	Not Available	647	Open in IMG/M
3300005563\|Ga0068855_100009760	All Organisms → cellular organisms → Bacteria → Proteobacteria	11581	Open in IMG/M
3300005577\|Ga0068857_101170686	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	744	Open in IMG/M
3300005614\|Ga0068856_100015919	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	7271	Open in IMG/M
3300005616\|Ga0068852_101078306	Not Available	823	Open in IMG/M
3300005617\|Ga0068859_100372695	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300005944\|Ga0066788_10047504	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300005944\|Ga0066788_10126568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	642	Open in IMG/M
3300005995\|Ga0066790_10167582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	940	Open in IMG/M
3300006028\|Ga0070717_11590700	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300006047\|Ga0075024_100141888	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	1088	Open in IMG/M
3300006186\|Ga0075369_10164877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1016	Open in IMG/M
3300006195\|Ga0075366_10081782	All Organisms → cellular organisms → Bacteria → Proteobacteria	1930	Open in IMG/M
3300009098\|Ga0105245_10010420	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	8096	Open in IMG/M
3300009176\|Ga0105242_11491067	Not Available	707	Open in IMG/M
3300009545\|Ga0105237_11749061	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300009551\|Ga0105238_12186317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	588	Open in IMG/M
3300010397\|Ga0134124_10015633	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	6165	Open in IMG/M
3300010864\|Ga0126357_1334105	Not Available	707	Open in IMG/M
3300012212\|Ga0150985_102282652	Not Available	550	Open in IMG/M
3300012212\|Ga0150985_102285867	Not Available	516	Open in IMG/M
3300012212\|Ga0150985_105993131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	599	Open in IMG/M
3300012212\|Ga0150985_113359403	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300012212\|Ga0150985_113945469	Not Available	829	Open in IMG/M
3300012469\|Ga0150984_100335153	All Organisms → cellular organisms → Bacteria → Proteobacteria	1844	Open in IMG/M
3300012469\|Ga0150984_100368420	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon BMS3Abin16	2137	Open in IMG/M
3300012469\|Ga0150984_102392159	All Organisms → cellular organisms → Bacteria → Proteobacteria	673	Open in IMG/M
3300012469\|Ga0150984_103123907	All Organisms → cellular organisms → Bacteria → Proteobacteria	1752	Open in IMG/M
3300012469\|Ga0150984_103395047	All Organisms → cellular organisms → Bacteria	2251	Open in IMG/M
3300012469\|Ga0150984_106419827	Not Available	501	Open in IMG/M
3300012469\|Ga0150984_107764412	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300012469\|Ga0150984_108205259	All Organisms → cellular organisms → Bacteria → Proteobacteria	624	Open in IMG/M
3300012469\|Ga0150984_110158569	Not Available	747	Open in IMG/M
3300012469\|Ga0150984_110627474	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300012469\|Ga0150984_111926010	Not Available	557	Open in IMG/M
3300012469\|Ga0150984_113079376	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1155	Open in IMG/M
3300012469\|Ga0150984_120807497	Not Available	748	Open in IMG/M
3300012891\|Ga0157305_10049443	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	896	Open in IMG/M
3300012895\|Ga0157309_10027800	All Organisms → cellular organisms → Bacteria → Proteobacteria	1286	Open in IMG/M
3300012895\|Ga0157309_10031238	All Organisms → cellular organisms → Bacteria → Proteobacteria	1232	Open in IMG/M
3300012900\|Ga0157292_10002380	All Organisms → cellular organisms → Bacteria → Proteobacteria	3476	Open in IMG/M
3300012909\|Ga0157290_10021257	All Organisms → cellular organisms → Bacteria → Proteobacteria	1420	Open in IMG/M
3300012909\|Ga0157290_10293605	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	596	Open in IMG/M
3300012909\|Ga0157290_10355818	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	558	Open in IMG/M
3300012916\|Ga0157310_10006968	All Organisms → cellular organisms → Bacteria	2630	Open in IMG/M
3300012943\|Ga0164241_10001821	All Organisms → cellular organisms → Bacteria → Proteobacteria	24844	Open in IMG/M
3300012943\|Ga0164241_10130885	All Organisms → cellular organisms → Bacteria	1798	Open in IMG/M
3300012984\|Ga0164309_10001213	All Organisms → cellular organisms → Bacteria → Proteobacteria	12843	Open in IMG/M
3300012988\|Ga0164306_10038821	All Organisms → cellular organisms → Bacteria	2797	Open in IMG/M
3300013296\|Ga0157374_11821265	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300014969\|Ga0157376_10280537	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	1569	Open in IMG/M
3300014969\|Ga0157376_10699965	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300018476\|Ga0190274_13426004	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	535	Open in IMG/M
3300019362\|Ga0173479_10655622	Not Available	559	Open in IMG/M
3300020581\|Ga0210399_10954318	Not Available	693	Open in IMG/M
3300021181\|Ga0210388_10070208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2951	Open in IMG/M
3300021405\|Ga0210387_10136717	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2085	Open in IMG/M
3300021475\|Ga0210392_10040076	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2822	Open in IMG/M
3300021478\|Ga0210402_10039154	All Organisms → cellular organisms → Bacteria	4119	Open in IMG/M
3300022523\|Ga0242663_1086771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia → Kineosporia mesophila	606	Open in IMG/M
3300022528\|Ga0242669_1119084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineosporia → Kineosporia mesophila	529	Open in IMG/M
3300022530\|Ga0242658_1244324	Not Available	505	Open in IMG/M
3300022720\|Ga0242672_1053532	Not Available	686	Open in IMG/M
3300022720\|Ga0242672_1078168	Not Available	611	Open in IMG/M
3300022720\|Ga0242672_1095984	Not Available	575	Open in IMG/M
3300022878\|Ga0247761_1000424	All Organisms → cellular organisms → Bacteria	8142	Open in IMG/M
3300022878\|Ga0247761_1041153	Not Available	857	Open in IMG/M
3300022878\|Ga0247761_1107737	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300022894\|Ga0247778_1005684	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	2899	Open in IMG/M
3300022894\|Ga0247778_1121962	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	703	Open in IMG/M
3300022903\|Ga0247774_1001939	All Organisms → cellular organisms → Bacteria → Proteobacteria	10340	Open in IMG/M
3300022906\|Ga0247766_1000036	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	30287	Open in IMG/M
3300022908\|Ga0247779_1131646	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300022911\|Ga0247783_1030982	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1395	Open in IMG/M
3300022911\|Ga0247783_1117575	All Organisms → cellular organisms → Bacteria → Proteobacteria	734	Open in IMG/M
3300023070\|Ga0247755_1035900	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300023070\|Ga0247755_1100986	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300023073\|Ga0247744_1050159	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300023265\|Ga0247780_1073015	Not Available	881	Open in IMG/M
3300023272\|Ga0247760_1000396	All Organisms → cellular organisms → Bacteria	48176	Open in IMG/M
3300023275\|Ga0247776_10202085	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300025588\|Ga0208586_1119969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559	Open in IMG/M
3300025893\|Ga0207682_10020522	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2594	Open in IMG/M
3300025911\|Ga0207654_10035051	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	2793	Open in IMG/M
3300025913\|Ga0207695_10318412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1445	Open in IMG/M
3300025924\|Ga0207694_11546098	Not Available	560	Open in IMG/M
3300025949\|Ga0207667_10044661	All Organisms → cellular organisms → Bacteria	4695	Open in IMG/M
3300026078\|Ga0207702_10149155	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Sandaracinaceae → Sandaracinus → unclassified Sandaracinus → Sandaracinus sp.	2125	Open in IMG/M
3300026088\|Ga0207641_10680935	Not Available	1012	Open in IMG/M
3300026116\|Ga0207674_12310260	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	500	Open in IMG/M
3300027915\|Ga0209069_10952935	Not Available	523	Open in IMG/M
3300028652\|Ga0302166_10008559	All Organisms → cellular organisms → Bacteria	1895	Open in IMG/M
3300028652\|Ga0302166_10012652	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300028652\|Ga0302166_10037196	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	994	Open in IMG/M
3300028714\|Ga0307309_10181786	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → unclassified Kofleriaceae → Kofleriaceae bacterium	546	Open in IMG/M
3300028794\|Ga0307515_10174064	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2131	Open in IMG/M
3300029990\|Ga0311336_10236453	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300029990\|Ga0311336_12060922	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	506	Open in IMG/M
3300030000\|Ga0311337_10018044	All Organisms → cellular organisms → Bacteria	5460	Open in IMG/M
3300030000\|Ga0311337_10019511	All Organisms → cellular organisms → Bacteria → Proteobacteria	5246	Open in IMG/M
3300030002\|Ga0311350_11086701	Not Available	714	Open in IMG/M
3300030294\|Ga0311349_10271784	All Organisms → cellular organisms → Bacteria → Proteobacteria	1599	Open in IMG/M
3300030988\|Ga0308183_1148835	Not Available	575	Open in IMG/M
3300031232\|Ga0302323_100851258	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300031232\|Ga0302323_101287735	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300031456\|Ga0307513_10638681	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300031456\|Ga0307513_11060690	Not Available	521	Open in IMG/M
3300031521\|Ga0311364_11790985	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	604	Open in IMG/M
3300031521\|Ga0311364_12014030	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300031722\|Ga0311351_10688861	Not Available	778	Open in IMG/M
3300031726\|Ga0302321_100001425	All Organisms → cellular organisms → Bacteria → Proteobacteria	20448	Open in IMG/M
3300031726\|Ga0302321_101602021	Not Available	752	Open in IMG/M
3300031938\|Ga0308175_100054321	All Organisms → cellular organisms → Bacteria → Proteobacteria	3482	Open in IMG/M
3300032157\|Ga0315912_10070824	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2740	Open in IMG/M
3300032954\|Ga0335083_10538198	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300034130\|Ga0370494_056557	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	60.47%
Host-Associated	Host-Associated	38.76%
Engineered	Engineered	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.91%
Plants	Host-Associated → Plants	38.76%
Aquatic	Environmental → Aquatic	1.55%
Solid Waste	Engineered → Solid Waste	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	34.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.93%
Peat	Environmental → Terrestrial → Peat	12.40%
Plant Litter	Environmental → Terrestrial → Plant Litter	11.63%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.63%
Roots	Host-Associated → Plants → Roots	3.88%
Rhizome	Host-Associated → Plants → Rhizome	2.33%
Sediment	Environmental → Aquatic → Sediment	1.55%
Grass	Engineered → Solid Waste → Grass	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.58%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.18%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.40%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	11.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.98%
Loam	Environmental → Terrestrial → Soil → Loam	5.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.88%
Unclassified	Host-Associated → Plants → Roots → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.55%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.55%
Composting	Engineered → Solid Waste → Grass → Composting	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.18%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.40%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	11.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.33%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.55%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.18%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	12.40%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	11.63%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	10.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.43%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	4.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.33%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.33%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	2.33%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	2.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.33%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.55%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.78%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300003571	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_35 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006186	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010864	Boreal forest soil eukaryotic communities from Alaska, USA - W3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022878	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L111-311C-4	Environmental	Open in IMG/M
3300022894	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L049-202B-5	Environmental	Open in IMG/M
3300022903	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L001-104B-6	Environmental	Open in IMG/M
3300022906	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L223-509R-6	Environmental	Open in IMG/M
3300022908	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5	Environmental	Open in IMG/M
3300022911	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L064-202C-5	Environmental	Open in IMG/M
3300023070	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L096-311B-4	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300023265	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L079-202R-5	Environmental	Open in IMG/M
3300023272	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L171-409R-4	Environmental	Open in IMG/M
3300023275	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L199-509C-5	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028652	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_3	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028794	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM	Host-Associated	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300034130	Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_05487082	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MAFSLAPLLIHSEAVPVKAREALRAVISAPVEQRKSALRSAAHVLYSETSLDCGDAMELVGLQAGCGCD*
rootH2_100245354	3300003320	Sugarcane Root And Bulk Soil	MAFSLAPLLVHSEAIPPKAREALRYATSAPAEHRKHALANAARVIYTETALDCDDAMEIVGLSDCGCA*
rootH2_100337194	3300003320	Sugarcane Root And Bulk Soil	MAFSLAPLLIHSDAVPVKAREALRAVISAPVEQRKSALRSAAHVLYSETSLDCGDALELVGLRGGCGCD*
rootH2_101678153	3300003320	Sugarcane Root And Bulk Soil	MAFSLAPLLVHSEAIPAKAREALRYASSAPAEHRKLALASAARVIYTETALDCDDAMEIVGLSDCGCA*
Ga0007419J51692_10859681	3300003571	Avena Fatua Rhizosphere	EQSAAAHPGKTNSMAFSLAPLLIHSEAVPVKAREALRAVITAPLEQRKSALRSAAQLLYSETSLDCGDALELVGLQTGCGCE*
Ga0070677_100091993	3300005333	Miscanthus Rhizosphere	LEAQAGLPSSAHPEGQTTTMAFSLAPLLIHSESVPVKAREALRAVSAVPVEQRKSALRSAARVLYTETSIDCGDAMELVGLQAGCGCD*
Ga0070682_1000248843	3300005337	Corn Rhizosphere	MAFSLAPLLIHSESVPVKAREALRAVSAAPAEHRKSALRSAARVLYAETSIDCGDAMELVGLQAGCGCD*
Ga0070682_1008670042	3300005337	Corn Rhizosphere	MAFSLAALLIHSEAVPIKAREALRAVSTAPVEQRKSALRSAARLLHSETSIDCGDALELVGLQAGCGCD*
Ga0070682_1018461251	3300005337	Corn Rhizosphere	SESVPVKAREALRAVSAVPAEHRKSALRSAARVLHSETSIDCGDAMELVGLQAGCGCD*
Ga0070685_114350971	3300005466	Switchgrass Rhizosphere	MAFSLAPLLIHSEAVPVKAREALRAVITAPVEQRKSALRSAAHVLYSETSLDCGDAMELV
Ga0070693_1003247732	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MAFSLAPLLIHSEAVPVKAREALRAVISAPVEQRKSALRSAARVLHSETSIDCGDAMELVGLQANCGCD*
Ga0070693_1014417181	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MATGSRSWIGQAKAGLPLSAHPEGRTTTMAFSLAPLLIHSESVPVKAREALRAVSAAPAEQRKSALRSAARVLYAETSIDCGDAMELVGLQAGCGCE*
Ga0070665_1016554632	3300005548	Switchgrass Rhizosphere	MAFSLAPLLIHSEAVPVKAREALRAVITAPVEQRKSALRSAAHVLYSETSLDCGDAMELVGLQAGCGCD*
Ga0068855_1000097604	3300005563	Corn Rhizosphere	MAFSLAHLLVHSEAVPPRAREALRAAHLAPAEQRKTALRSAARVLYTETPLDCSDALEIVGLQSDCGCS*
Ga0068857_1011706862	3300005577	Corn Rhizosphere	MAFSLAHLLVHSEAVPPRAREALRAAHLAPAEQRKSALRSAARVLYTETPLDCSDALEIVGLQSDCGCS*
Ga0068856_1000159193	3300005614	Corn Rhizosphere	MAFSLAHLLVHSEAVPPRAREALRAAHLAPADQRKTALRSAARVLYTETPLDCSDALEIVGLQSDCGCS*
Ga0068852_1010783062	3300005616	Corn Rhizosphere	EAVPVKAREALRAVISAPVEQRKSALRSAARVLHSETSIDCGDAMELVGLQANCGCD*
Ga0068859_1003726953	3300005617	Switchgrass Rhizosphere	MAFSLAPLLIHSEAVPVKAREALRAVITAPVEQRKSALRSAARVLYSETSLDCGDAMELVGLQTGCGCD*
Ga0066788_100475042	3300005944	Soil	MAFSLAPLLVHSESIPLVVREALRAATAAPAEHRRSALASAARVLYMETPVNCDDALEIVGLQSDCGCD*
Ga0066788_101265681	3300005944	Soil	WRSRGHSEGTPIMAFSLAPLLIHSDSVPLRARQALLAASVAPAEDRQTALAHAARVLYTESSLDCEDALEIVGLQGDCGCG*
Ga0066790_101675821	3300005995	Soil	MAFSLAPLLMHSVCPRQAREALRAASAAPAEQRNSALASAARVLYSETALDCDDALEIVGLQSDCGCD*
Ga0070717_115907002	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAFSLAHLLVHSEAVPPRAREALRAAHLAPAEQRKSALKSAARVLYTETPLDCSDALEIVGLQ
Ga0075024_1001418882	3300006047	Watersheds	MAFSLAPLLIHSESVPVKAREALRAVSAVPVDQRKSALRSAARVLYLETSIDCGDAMELVGLQSGCGCD*
Ga0075369_101648772	3300006186	Populus Endosphere	FSLAPLLIHSESVPLKAREALRAASVAPFEQRKLALANAARVLYTESALDCRDAFEIVGLQSDCGC*
Ga0075366_100817824	3300006195	Populus Endosphere	MAFSLAPLLIHSESVPLKAREALRAASAAPFEQRKLALASAARVLHTESALDCRDALEIVGLQSDCGC*
Ga0105245_100104205	3300009098	Miscanthus Rhizosphere	MAFSLAPLLIHSESIPAKAREALRAATSAPIEHRASALESAARVLYTETALDCRDAREIVGLASGGCG*
Ga0105242_114910672	3300009176	Miscanthus Rhizosphere	LLIHSESVPVKAREALRAVSAVPAEQRKSALRSAARVLHSETSIDCGDAMELVGLQAGCGCD*
Ga0105237_117490612	3300009545	Corn Rhizosphere	MAFSLAPLLIHSEAVPAKAREALRAVSSTPTEHRKSALRSAAKLLYTETSLDCGDAMELVGLQNCGCD*
Ga0105238_121863172	3300009551	Corn Rhizosphere	MAFSLAPLLVHSEAIPPKAREALRYATSAPAEHRKHALASAARVIYAETALDCDDAMEIVGLSDCGCS*
Ga0134124_100156334	3300010397	Terrestrial Soil	MAFSLAPLLIHSEAVPVKAREALRAVTTAPVEQRKSALRSAAHVLYAETSLDCGDAMELVGLQAGCGCD*
Ga0126357_13341051	3300010864	Boreal Forest Soil	MAFSLAPLLIHSESVPLKARQALVAASLAPSEQRESALVNAARVLYTESALNCEDALEIVGLQADCGCAD*
Ga0150985_1022826522	3300012212	Avena Fatua Rhizosphere	DQAGLPSSAHPERQSTTMAFSLAPLLIHSESVPVKAREALRAVSAAPMEQRRSALRSAAHVLYTETSIDCGDAMELVGLQAGCGCD*
Ga0150985_1022858672	3300012212	Avena Fatua Rhizosphere	ERQSTTMAFSLAPLLIHSESVPVKAREALRAVSAAPMEQRKSALRSAAHVLYTETSIDCGDAMELVGLQAGCGCD*
Ga0150985_1059931312	3300012212	Avena Fatua Rhizosphere	EESGPANPERRTTMAFSLAPLLIHSEAVPVKAREALRAVISAPVEHRKSALRSAAQALYSETSLDCGDAMELVGLQAGCGCD*
Ga0150985_1133594032	3300012212	Avena Fatua Rhizosphere	MAFSLATLLIHSEAVPVKAREALRAVSTAPVEQRKSALRSAARLLHSETSIDCGDALELVGLQAGCGCD*
Ga0150985_1139454691	3300012212	Avena Fatua Rhizosphere	MAFSLAPLLIHSEAVPVKAREALRAVITAPLEQRKSALRSAAQLLYSETSLDCGDALELVGLQTGCGCE*
Ga0150984_1003351531	3300012469	Avena Fatua Rhizosphere	EESGPANPERRTTMAFSLAPLLIHSEAVPVKAREALRAVISSPVEHRKSALRSAAQALYSETSLDCGDAMELVGLQAGCGCD*
Ga0150984_1003684201	3300012469	Avena Fatua Rhizosphere	MAFSLAPLLIHSESVPVKAREALRAVSSVKAEHRTSALHSAARVLYSETSLDCSDAMELVGLQDCGCE*
Ga0150984_1023921592	3300012469	Avena Fatua Rhizosphere	LPRPPGKTQTMAFSLAPLLIHSEAVPVKAREALRAVIAAPVDQRRSALHSAARVLYSETSIDCGDAMELVGLQSGCGCD*
Ga0150984_1031239071	3300012469	Avena Fatua Rhizosphere	KNPARQTRKDRTTMAFSLAPLLVHSEAVPVKAREALRAVISAPVEHRKSALRSAAQALYSETSLDCGDAMELVGLQAGCGCD*
Ga0150984_1033950471	3300012469	Avena Fatua Rhizosphere	MAFSLAPLLIHSEAVPVKAREALRAVISAPVEHRKSALRSAAQALYSETSLDCGDAMELVGLQAGCGCD*
Ga0150984_1064198271	3300012469	Avena Fatua Rhizosphere	MAFSLAPLLIHSESIPHRAREALRSAALAPAEQKKTALASAARILYSETSIDCRDAMEIVGLNAGCGCD*
Ga0150984_1077644122	3300012469	Avena Fatua Rhizosphere	EDQAGLPSSAHPERQSTTMAFSLAPLLIHSESVPVKAREALRAVSAAPMEQRRSALRSAAHVLYTETSIDCGDAMELVGLQAGCGCD*
Ga0150984_1082052592	3300012469	Avena Fatua Rhizosphere	KTKAGLPSSAHPERQSTTMAFSLAPLLIHSESVPVKAREALRAVSAAPMEQRKSALRSAAHVLYTETSIDCGDAMELVGLRAGCGCD*
Ga0150984_1101585691	3300012469	Avena Fatua Rhizosphere	MAFSLAPLLIHSESIPPNAREALRSAALVPAEHRKTALASAARILHSETSLDCRDAMEIVGLNAGCGCD*
Ga0150984_1106274743	3300012469	Avena Fatua Rhizosphere	MAFSLAPLLIHSESVPVKAREVLRAVGSAPTEHRKSALRSAAKVLYSETSLDCGDAMELVGLQDCGCE*
Ga0150984_1119260101	3300012469	Avena Fatua Rhizosphere	PGKTSPMAFSLAPLLIHSEAVPVKAREALRAVTNAPVEQRRSALRSAARVLYSETSLDCGDAMELVGLQAGCGCD*
Ga0150984_1130793761	3300012469	Avena Fatua Rhizosphere	NAREALRSAALVPAEHRKTALASAARILHSETSLDCRDAMEIVGLSAGCGCD*
Ga0150984_1142413171	3300012469	Avena Fatua Rhizosphere	WKTISPESPNRAGRPERTEGSTYMAFSLAPLLIHSESVPVKAREALRAVNAAPVEHRKSALRSAAKVLHTETSLDCGDALELVGLHGGGCE*
Ga0150984_1208074971	3300012469	Avena Fatua Rhizosphere	MAFSLAPLLIHSESIPPNAREALRSAALVPAEHRKTALASAARILHSETSLDCRDAMEIVGLSAGCGCD*
Ga0157305_100494432	3300012891	Soil	MAFSLAPLLIHSESVPVKAREALRAVSAVPVEQRKSALRSAARVLYTETSIDCGDAMELVGLQAGCGCD*
Ga0157309_100278002	3300012895	Soil	MAFSLAPLLIHSEAVPVKAREALRAVNAAPVEQRRSALRLAARVLHSETSIDCGDAMELVGLQAGCGCD*
Ga0157309_100312382	3300012895	Soil	MAFSLAPLLIHSESVPVKAREALRAVDTAPADQRKSALRSAAQALYAETSLDCGDAMELVGLQAGCGCD*
Ga0157292_100023802	3300012900	Soil	MAFSLARLLIHSESVPVKAREALRAVDTAPADQRKSALRSAAQALYAETSLDCGDAMELVGLQAGCGCD*
Ga0157290_100212572	3300012909	Soil	MAFSLAPLLIHSESVPVKAREALRAIDTAPADQRKAALRSAAQALYAETSLDCGDAMELVGLQAGCGCD*
Ga0157290_102936052	3300012909	Soil	MAFSLAPLLIHSEAVPVKAREALRAVSNAPIEHRKSALRSAARVLYAETALDCGDALE
Ga0157290_103558182	3300012909	Soil	MAFSLAPLLIDSEAVPVKAREALRAVSSAPVEERKSALRSAAHVLYSETSLDCGDALELVGLQAGCSCD*
Ga0157310_100069684	3300012916	Soil	MAFSLAALLIHSEAVPIKAREALRAVSTAPVEQRKSALRSASRLLHSETSIDCGDALELVGLQAGCGCD*
Ga0164241_100018216	3300012943	Soil	MAFSLAPLLIHSEAVPVKAREALRAVITAPVEQRKSALRSAARVLYSETSLDCGDAMELVGLQASCGCD*
Ga0164241_101308853	3300012943	Soil	MAFSLAPLLIHSEAVPVKAREALRAVSNAPVEQRRSALRSAARVLYSETSLDCGDAMELVGLQAGCGCD*
Ga0164309_100012133	3300012984	Soil	MAFSLAPLLIHSEAVPVKAREALRAVTTAPVEQRKSALRSAARVLYSETSLDCGDAMELVGLQAGCGCD*
Ga0164306_100388212	3300012988	Soil	MAFSLAPLLIHSEAVPVKAREALRAVSTAPVELRKSALRSAAHVLYAETSLDCGDAMELVGLQAGCGCD*
Ga0157374_118212651	3300013296	Miscanthus Rhizosphere	IPAKAREALRAATTAPIAHRASALESAARVLYTETALDCRDAREIVGLASGGCG*
Ga0157376_102805371	3300014969	Miscanthus Rhizosphere	MAFSLAPLLIHSESVPIKAREALRAVSAVPAEHRKSALRSAARVLHSETSIDCGDAMELVGLQAGCG
Ga0157376_106999651	3300014969	Miscanthus Rhizosphere	MAFSLATLLIHSESVPVKAREALRAVSAVPAEQRKSALRSAARVLHSETSIDCGDAMELVGLQAGCGCD*
Ga0190274_134260042	3300018476	Soil	MAFSLAPLLIHSEAVPIKAREALRAVSAAPVEQRKSALRLAARVLHSETSIDCGDAMELVGLQAGCGCD
Ga0173479_106556221	3300019362	Soil	MAFSLAPLLIHSESVPVKAREALRAVDTAPADQRKSALRSAAQALYAETSLDCGDAMELVGLQAGCGCD
Ga0210399_109543182	3300020581	Soil	AFSLAPLLIHSDSVPAKAREALRLAHSAPVEQRRTALASAARVLYSETALNCDDALEIVGLQSDCGCD
Ga0210388_100702084	3300021181	Soil	MAFSLAPLLIHSESVPLKAREALRAASVAPLEHRHSALASAARVLYAETALDCSDALEIVGLQGNCGCD
Ga0210387_101367171	3300021405	Soil	MAFSLAPLLIHSDSVPAKAREALRLAHSAPLEERRTALASAARVLYSETALNCDDALEIVGLQNDCGCD
Ga0210392_100400762	3300021475	Soil	MAFSLAPLLVHSESIPAVAREALRAANAAPAEHRRSALASAARVLYTETALDCDDALEIVGLQSDCGCD
Ga0210402_100391544	3300021478	Soil	MAFSLAPLLIHSDSVPLKAREALRAAATVPAEHRRSALASAAHVLYTEAALDCEDALEIVGLQADCGCG
Ga0242663_10867711	3300022523	Soil	PVRSAPGTQKGILTMAFSLAPLLIHSESVPLKAREALRAASVAPLEHRHSALASAARVLYAETALDCSDALEIVGLQGNCGCD
Ga0242669_11190841	3300022528	Soil	HSDSIPLKAREALRAASVAPLEHRNSALASAARVLHAETSLDCSDALEIVGLQGNCGCD
Ga0242658_12443241	3300022530	Soil	RRLVPAHPKEPDDMAFSLAPLLIHSESVPVKAREALRAVSSAPTEHRKSALRSAAKVLYSETSIDCGDAMELVGLQGCGCE
Ga0242672_10535321	3300022720	Soil	LDPRISAAPKRIPIMAFSLAPLLIHSDSVPAKAREALRLAHSAPVEERRTALASAARVLYSETALNCDDALEIVGLQNDCGCD
Ga0242672_10781681	3300022720	Soil	SNPTALAGPRAPEGPQDMAFSLAPLLIHSESVPVRAREALRAVSSTPVEDRRSALRSAAKVLYTETSIDCGDAMELVGLQNCGCD
Ga0242672_10959842	3300022720	Soil	MAFSLAPLLVHSESIPLVAREALRAANAAPAEHRRSALASAARVLYTETALDCDDALEIVGLQSDCGCD
Ga0247761_10004247	3300022878	Plant Litter	MAFSLAPLLIHSESVPVKAREALRAVSAAPAEQRKSALRSAAHALYTETSLDCGDALELVGLQGGCGCD
Ga0247761_10411531	3300022878	Plant Litter	VPVKAREALRAVIAAPAEQRKSALRSAARVLHSETSLDCGDALELVGLQAGCGCD
Ga0247761_11077371	3300022878	Plant Litter	MAFSLAPLLIHSEAVPVKAREALRAIGTAPVEERKSALRSVAHVLYSETSLDCGDAMELVGLQAGCGSD
Ga0247778_10056842	3300022894	Plant Litter	MAFSLAALLIHSEAVPIKAREALRAVSTAPVEQRKSALRSAARLLHSETSIDCGDALELVGLQAGCGCD
Ga0247778_11219622	3300022894	Plant Litter	MAFSLAPLLIHSEAVPVKAREALRAVNAAPVEQRRSALRLAARVLHSETSIDCGDAMELVGLQAGCGCD
Ga0247774_10019398	3300022903	Plant Litter	MAFSLAALLIHSEAVPIKAREALRAVSTAPVEQRKSALRSAARLLYSETSIDCGDALELVGLQAGCGCD
Ga0247766_100003610	3300022906	Plant Litter	MAFSLAPLLIHSEAVPVKAREALRAVITAPVEQRKSALRSAAHVLYSETSLDCGDAMELVGLQAGCGCD
Ga0247779_11316461	3300022908	Plant Litter	MAFSLAPLLIHSESVPVKAREALRAVSAVPAEHRKSALRSAARVLHSETSIDCGDAMELVGLQAGCGCD
Ga0247783_10309822	3300022911	Plant Litter	MAFSLAPLLIHSESVPVKAREALRAVSAVPVEQRKSALRSAARVLYTETSIDCGDAMELVGLQAGCGCD
Ga0247783_11175752	3300022911	Plant Litter	MAFSLAPLLIHSEAVPIKAREALRAVSTAPAEQRKSALHRAARVLHSETSIDCGDAMELVGLQAGCGCD
Ga0247755_10359002	3300023070	Plant Litter	MAFSLARLLIHSESVPVKAREALRAVDTAPADQRKSALRSAAQALYAETSLDCGDAMELVGLQAGCGCD
Ga0247755_11009861	3300023070	Plant Litter	MAFSLAPLLIHSESVPVKAREALRAVIAAPAEQRKSALRSAARVLHSETSLDCGDALELVGLQAGCGCD
Ga0247744_10501592	3300023073	Soil	NPPRQPLERRTHMAFSLAPLLIHSEAVPVKAREALRAVITAPAEQRKSALRSAAYVLHSETSLDCGDALELVGLQAGCGCD
Ga0247780_10730152	3300023265	Plant Litter	PMAFSLAPLLIHSESVPVKAREALRAVDTAPADQRKSALRSAAQALYAETSLDCGDAMELVGLQAGCGCD
Ga0247760_100039627	3300023272	Plant Litter	MAFSLAPLLIHSESVPVKAREALRAVSAAPVEQRKSALRSAAQVLYAETSLDCGDAMELVGLQAGCGCD
Ga0247776_102020852	3300023275	Plant Litter	MAFSLAPLLIHSESVPVKAREALRAVSAAPLEHRKSALRSAAQVLYDETSLDCGDAMELVGLQAGCGCD
Ga0208586_11199692	3300025588	Arctic Peat Soil	MAFSLAPLLIHSESVPAKAREALRAASAAPAEHRNSALASAARVLYSETALDCDDALEIVGLQGDCGCD
Ga0207682_100205224	3300025893	Miscanthus Rhizosphere	LEAQAGLPSSAHPEGQTTTMAFSLAPLLIHSESVPVKAREALRAVSAVPVEQRKSALRSAARVLYTETSIDCGDAMELVGLQ
Ga0207654_100350513	3300025911	Corn Rhizosphere	MAFSLAPLLIHSESIPAKAREALRAATSAPIEHRASALESAARVLYTETALDCRDAREIVGLASGGCG
Ga0207695_103184122	3300025913	Corn Rhizosphere	MAFSLAPLLVHSEAIPPKAREALRYATSAPAEHRKHALASAARVIYAETALDCDDAMEIVGLSDCGCS
Ga0207694_115460982	3300025924	Corn Rhizosphere	MAFSLAPLLIHSEAVPAKAREALRAVSSTPTEHRKSALRSAAKLLYTETSLDCGDAMELVGLQNCGCD
Ga0207667_100446613	3300025949	Corn Rhizosphere	MAFSLAHLLVHSEAVPPRAREALRAAHLAPAEQRKTALRSAARVLYTETPLDCSDALEIVGLQSDCGCS
Ga0207702_101491551	3300026078	Corn Rhizosphere	MAFSLAHLLVHSEAVPPRAREALRAAHLAPADQRKTALRSAARVLYTETPLDCSDALEIVGLQSDCGCS
Ga0207641_106809352	3300026088	Switchgrass Rhizosphere	MAFSLAPLLIHSEAVPVKAREALRAVTTAPVEQRKSALRSAAHVLYAETSLDCGDAMELVGLQAGCGCD
Ga0207674_123102602	3300026116	Corn Rhizosphere	MAFSLAHLLVHSEAVPPRAREALRAAHLAPAEQRKSALRSAARVLYTETPLDCSDALEIV
Ga0209069_109529351	3300027915	Watersheds	MAFSLAPLLIHSESVPVKAREALRAVSAVPVDQRKSALRSAARVLYLETSIDCGDAMELVGLQSGCGCD
Ga0302166_100085593	3300028652	Fen	MPFSLAPLLIHSESVPVRAREALRAVSAAPVDQRKSALRSAARVLYTETSLDCGDAMELVGLQGNCGCD
Ga0302166_100126522	3300028652	Fen	MAFSLAPLLIHSESVPVKAREALRAVSAAPADQRKSALRSAARVLYSETSIDCGDALELVGLRASCGCD
Ga0302166_100371963	3300028652	Fen	MPFSLAPLLIHSESVPTKAREALRAVSAAPLEQRKSALRSAARVLYTETSLDCGDAMELVGLQGNCGCD
Ga0307309_101817862	3300028714	Soil	MAFSLAPLLIHSESVPVKARDALRAVDTAPADQRKSALRTAAQALYAETSLDCGDAMELVGLQAGCGCD
Ga0307515_101740642	3300028794	Ectomycorrhiza	MAFSLAPLLIHSESVPVKAREALRAISAAPLEHRKSALRSAARVLYAETSIDCGDALELVGLQGGCGCD
Ga0311336_102364531	3300029990	Fen	MAFSLAPLLIHSESVPVKAREALRAVSAAPADQRKSALRSAARVLYSETSIDCGDALE
Ga0311336_120609222	3300029990	Fen	MAFSLAPLLIHSEAVPVKAREALRGLTESTPLELRTSALRSAAQVLYSETALDCREALELVG
Ga0311337_100180445	3300030000	Fen	SESVPVRAREALRAVSAAPVDQRKSALRSAARVLYTETSLDCGDAMELVGLQGNCGCD
Ga0311337_100195116	3300030000	Fen	TTMAFSLAPLLIHSESVPVKAREALRAVSAAPADQRKSALRSAARVLYSETSIDCGDALELVGLRASCGCD
Ga0311350_110867012	3300030002	Fen	APLLIHSEAVPVKAREALRGLTESTPLELRTSALRSAAQVLYSETALDCREALELVGLQASCGCE
Ga0311349_102717843	3300030294	Fen	MAFSLAPLLIHSEAVPVKAREALRGLTESTPLELRTSALRSAAQVLYSETALDCREALELVGLQASCGCE
Ga0308183_11488351	3300030988	Soil	QAGLPSSAHPEGQTTTMAFSLAPLLIHSESVPVKAREALRAVSAVPVEQRKSALRSAARVLYTETSIDCGDAMELVGLQAGCGCD
Ga0302323_1008512581	3300031232	Fen	MAFSLAPLLIHSESVPVKAREALRAIGNAPSEHRKSALRSVAKVLYLETSLDCGDAMELVGLQDCGCE
Ga0302323_1012877351	3300031232	Fen	MAFSLAPLLIHSESISVNAREALRSASLAPAEQRKTALASAARILYHETSLDCRDALEIVGLQAGCGCD
Ga0307513_106386811	3300031456	Ectomycorrhiza	SGRHSSARIEGPTIMAFSLAPLLIHSESVPIKAREALRAVNTAPVEHQRSALHSAAKVLYSETSIDCGDAMELVGLQGGCGCE
Ga0307513_110606901	3300031456	Ectomycorrhiza	MAFSLAPLLIHSESVPIKAREALRAVNAAPLEHRKSALRSAARVLHTEAAIDCGDALELVGLQSGCGCD
Ga0311364_117909851	3300031521	Fen	MAFSLAPLLVHSAAVPLEAREALRAVASGLPLEQRKTALRSAARLLHTETALDCGDALELVGLHAGCGCD
Ga0311364_120140301	3300031521	Fen	MPFSLAPLLIHSESVPVRAREALRAVSAAPVDQRKSALRSAARVLYTETSLDCGDA
Ga0311351_106888612	3300031722	Fen	LLIHSESVPVRAREALRAVSAAPVDQRKSALRSAARVLYTETSLDCGDAMELVGLQGNCGCD
Ga0302321_10000142524	3300031726	Fen	MPFSLAPLLIHSESVPVRAREALRAVSAAPVDQRKSALRSAARVLYTETSLDCGDAMELVGLQ
Ga0302321_1016020211	3300031726	Fen	RGPRLYSRKANPGARPRWLAHAHLKDPKNMAFSLAPLLIHSESVPVKAREALRAIGTASTEHRRSALHSAAKVLYSETSLDCGDAMELVGLQDCGCE
Ga0308175_1000543213	3300031938	Soil	MAFSLANLLIHSESVPVKAREALRAVSAVPLDQRKSALRSAARVLHAETSIDCGDAMELVGLQSGCGCD
Ga0315912_100708245	3300032157	Soil	MIMAFSLAPLLIHSESVPVKAREALRAVSSVPAEQRRSALRSAARVLHSETAIDCGDAMELVGLQACGCE
Ga0335083_105381982	3300032954	Soil	PPANPGKTNPMAFSLAPLLIHSEAVPVKAREALRAVVSAPVEQRKSALRSAARVLYSETSIDCGDAMELVGLQAGCGCD
Ga0370494_056557_798_986	3300034130	Untreated Peat Soil	LLIHSDAVPAKAREALRAASFANAEGRRSALASAARVLYTETTLDCSDALEVVGLHSDCGCG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063844

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences