Metagenome / Metatranscriptome Family F063790

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063790
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	92 residues
Representative Sequence	LTPEVSKLCAENSAKAGCHAWLAHPMHADDLARTVRQVLNAETDAPASVDEALLGFKRCPGCESDSVRATLRVGSIQYYCCKACSFCWRAEMVKA
Number of Associated Samples	108
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.33 %
% of genes near scaffold ends (potentially truncated)	95.35 %
% of genes from short scaffolds (< 2000 bps)	91.47 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment (8.527 % of family members)
Environment Ontology (ENVO)	Unclassified (31.783 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.837 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.39% β-sheet: 14.63% Coil/Unstructured: 60.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF04226	Transgly_assoc	93.80
PF00072	Response_reg	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	93.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	64.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.20 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	50.39 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	8.53 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.39 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	8.53 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.39 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	8.53 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.39 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	8.53 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.39 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	8.53 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	0.78 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_102059747	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300000953\|JGI11615J12901_10260092	All Organisms → cellular organisms → Bacteria	2773	Open in IMG/M
3300001139\|JGI10220J13317_11113768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300004114\|Ga0062593_100546468	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300004114\|Ga0062593_102295223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300004463\|Ga0063356_100928698	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300004479\|Ga0062595_100280774	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300004479\|Ga0062595_101023887	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300004480\|Ga0062592_100007679	All Organisms → cellular organisms → Bacteria → Proteobacteria	4061	Open in IMG/M
3300004643\|Ga0062591_102709651	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005093\|Ga0062594_100023807	All Organisms → cellular organisms → Bacteria	2645	Open in IMG/M
3300005178\|Ga0066688_11026188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300005184\|Ga0066671_10157660	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300005328\|Ga0070676_10886122	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300005343\|Ga0070687_100035936	All Organisms → cellular organisms → Bacteria	2465	Open in IMG/M
3300005343\|Ga0070687_100199206	All Organisms → cellular organisms → Bacteria → Proteobacteria	1212	Open in IMG/M
3300005343\|Ga0070687_101414128	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005354\|Ga0070675_100087204	All Organisms → cellular organisms → Bacteria	2610	Open in IMG/M
3300005364\|Ga0070673_100852949	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300005364\|Ga0070673_102024411	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300005365\|Ga0070688_100457852	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300005365\|Ga0070688_100675290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300005441\|Ga0070700_101254632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300005456\|Ga0070678_101160817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300005467\|Ga0070706_100396995	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300005471\|Ga0070698_100285061	All Organisms → cellular organisms → Bacteria	1583	Open in IMG/M
3300005535\|Ga0070684_102036514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300005544\|Ga0070686_101664180	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300005545\|Ga0070695_100889971	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300005545\|Ga0070695_100928370	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300005546\|Ga0070696_100059100	All Organisms → cellular organisms → Bacteria	2679	Open in IMG/M
3300005549\|Ga0070704_100361763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	1228	Open in IMG/M
3300005549\|Ga0070704_101034423	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300005564\|Ga0070664_101750935	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300005564\|Ga0070664_101887972	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300005618\|Ga0068864_101326883	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300005618\|Ga0068864_102451032	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300005841\|Ga0068863_100809255	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300006237\|Ga0097621_100502785	All Organisms → cellular organisms → Bacteria → Proteobacteria	1098	Open in IMG/M
3300006852\|Ga0075433_10238255	All Organisms → cellular organisms → Bacteria → Proteobacteria	1615	Open in IMG/M
3300006854\|Ga0075425_100195725	All Organisms → cellular organisms → Bacteria → Proteobacteria	2323	Open in IMG/M
3300006871\|Ga0075434_102581599	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300006903\|Ga0075426_11056526	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300007076\|Ga0075435_101430845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300009094\|Ga0111539_12784865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300009100\|Ga0075418_10597933	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300009100\|Ga0075418_12433241	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300009137\|Ga0066709_102453705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300009176\|Ga0105242_12805386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300009176\|Ga0105242_13152594	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300010043\|Ga0126380_10526462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	914	Open in IMG/M
3300010046\|Ga0126384_10502199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1046	Open in IMG/M
3300010147\|Ga0126319_1187202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300010147\|Ga0126319_1296313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300010147\|Ga0126319_1580064	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	626	Open in IMG/M
3300010326\|Ga0134065_10496716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300010400\|Ga0134122_13037936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300010403\|Ga0134123_13603195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300011425\|Ga0137441_1193224	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300012040\|Ga0137461_1224988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300012159\|Ga0137344_1111823	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300012201\|Ga0137365_10890166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300012206\|Ga0137380_10699377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300012469\|Ga0150984_103566115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300012499\|Ga0157350_1014822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300012907\|Ga0157283_10114588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300012951\|Ga0164300_10254666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300014326\|Ga0157380_11036444	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300014874\|Ga0180084_1094803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300015054\|Ga0137420_1001036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1105	Open in IMG/M
3300015248\|Ga0180079_1079235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300015371\|Ga0132258_11533962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1682	Open in IMG/M
3300015372\|Ga0132256_100809426	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300015373\|Ga0132257_100185124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2459	Open in IMG/M
3300015373\|Ga0132257_101723026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300015374\|Ga0132255_100116199	All Organisms → cellular organisms → Bacteria → Acidobacteria	3666	Open in IMG/M
3300019228\|Ga0180119_1111276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300019229\|Ga0180116_1149086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300019232\|Ga0180114_1324390	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	508	Open in IMG/M
3300019233\|Ga0184645_1020176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300019233\|Ga0184645_1330816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300019249\|Ga0184648_1349958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300019254\|Ga0184641_1128902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300019257\|Ga0180115_1136649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300019259\|Ga0184646_1428968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300019279\|Ga0184642_1084108	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	517	Open in IMG/M
3300020016\|Ga0193696_1114115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300020065\|Ga0180113_1155044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300021445\|Ga0182009_10115572	All Organisms → cellular organisms → Bacteria → Acidobacteria	1241	Open in IMG/M
3300021445\|Ga0182009_10800826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300022756\|Ga0222622_11065078	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	595	Open in IMG/M
3300025907\|Ga0207645_10662767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300025910\|Ga0207684_10586627	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	952	Open in IMG/M
3300025923\|Ga0207681_10922330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300025930\|Ga0207701_11300875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300025930\|Ga0207701_11594985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300025945\|Ga0207679_11611889	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300025945\|Ga0207679_11725099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300025960\|Ga0207651_10253555	All Organisms → cellular organisms → Bacteria → Acidobacteria	1441	Open in IMG/M
3300025981\|Ga0207640_12067401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300026075\|Ga0207708_11019959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300026095\|Ga0207676_10061928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2965	Open in IMG/M
3300026315\|Ga0209686_1205899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300026552\|Ga0209577_10280437	All Organisms → cellular organisms → Bacteria → Acidobacteria	1248	Open in IMG/M
3300027787\|Ga0209074_10565811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300027821\|Ga0209811_10247484	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300027873\|Ga0209814_10343361	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	653	Open in IMG/M
3300027873\|Ga0209814_10495147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300028880\|Ga0307300_10256796	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	581	Open in IMG/M
3300031058\|Ga0308189_10222511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300031093\|Ga0308197_10154749	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	740	Open in IMG/M
3300031114\|Ga0308187_10497768	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	501	Open in IMG/M
3300031226\|Ga0307497_10350431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300031231\|Ga0170824_108854111	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	502	Open in IMG/M
3300031720\|Ga0307469_11189833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	720	Open in IMG/M
3300031740\|Ga0307468_101871189	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300031820\|Ga0307473_11542511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300031854\|Ga0310904_10175102	All Organisms → cellular organisms → Bacteria → Proteobacteria	1271	Open in IMG/M
3300031944\|Ga0310884_10748043	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300032012\|Ga0310902_11281592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300032013\|Ga0310906_10135650	All Organisms → cellular organisms → Bacteria → Acidobacteria	1412	Open in IMG/M
3300032180\|Ga0307471_100656201	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300032180\|Ga0307471_103406041	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300032421\|Ga0310812_10482495	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300033433\|Ga0326726_10165320	All Organisms → cellular organisms → Bacteria → Acidobacteria	2026	Open in IMG/M
3300034147\|Ga0364925_0066817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1241	Open in IMG/M
3300034176\|Ga0364931_0060058	All Organisms → cellular organisms → Bacteria → Acidobacteria	1164	Open in IMG/M
3300034643\|Ga0370545_116781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300034671\|Ga0314796_089433	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.54%
Host-Associated	Host-Associated	29.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.04%
Plants	Host-Associated → Plants	29.46%
Aquatic	Environmental → Aquatic	15.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.16%
Freshwater	Environmental → Aquatic → Freshwater	10.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.53%
Sediment	Environmental → Aquatic → Sediment	4.65%
Floodplain	Environmental → Terrestrial → Floodplain	1.55%
Peat	Environmental → Terrestrial → Peat	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.98%
Loam	Environmental → Terrestrial → Soil → Loam	14.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.08%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.08%
Sediment	Environmental → Aquatic → Freshwater → Sediment	8.53%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.10%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.33%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.78%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.05%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.08%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	8.53%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.10%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.88%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.33%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.55%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	8.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.43%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.10%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.88%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.33%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.55%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.78%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011425	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012499	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014874	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_2_16_10D	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015248	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT530_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019228	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019229	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_1_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019232	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT530_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020065	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034671	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1020597471	3300000559	Soil	LCREIREPQPSEPPAIIVLTPEVSKMCAENSAKAGCNAWIAHPMHADDLVRTVRQVLNAETDAPASLDEALLGSKRCPGCESDSVRATLRVGAVQYYCCKACGFCWRAEMVKA*
JGI11615J12901_102600927	3300000953	Soil	GWDLCREIRKPQPAAPPPVIVLTPEVSKMCVEDSAKAGCNAWLAHPSVADDLARMVRQVLDTDTDAPASADEALVGLKNCPVCESTSIRATLRVGAVQYYCCKSCNFCWRADVLAGKV*
JGI10220J13317_111137682	3300001139	Soil	EHSAKAGCIAWLAHPMHADDLARTVRQVLNAETDAPASPEEALLGSKRCPGCESDSVRSTLRVGAVQYYCCKACSFCWRAEMIKA*
Ga0062593_1005464681	3300004114	Soil	KPQPSEPPAIIMLTPEVSKMCAENSAKAGCDAWLAHPMHADDLARTVRHVLNAETDAPASADEALLGSKRCPGCESDSVRATLRVGSAQYYCCNACSFRWRAEMVKA*
Ga0062593_1022952232	3300004114	Soil	CAENSAKVGCNAWLAHPMHADDLVRAVRQVLNAETDAPASLAEALLGSKRCPACESDSVRATLRIGAIQYYSCKACSFGWRADMVKA*
Ga0063356_1009286982	3300004463	Arabidopsis Thaliana Rhizosphere	VSKVCAADSAKAGCNAWLAHPTVAEDLARTVRQVLDMNTASPESPAEALLGLTECPACGSDQIRATLRVSPIQYYCCRGCGFCWRAEVLQPAR*
Ga0062595_1002807743	3300004479	Soil	IKKPQAANGGGGPPIIVLTPEVSRMCAEDSTKAGCSAWLAHPTIADDLARTVRQVLDYETDRPSSVDEALLGFKRCPVCESDMVRATLRVGAIQYYCCKACSFCWRAETMKT*
Ga0062595_1010238872	3300004479	Soil	IIVLTPEVSKICAENSAKAGCDAWLAHPMHADDLARTVRHVLSSETDTPASLDEALLGLKHCPACDSETVRVALRVGSVQYYGCKTCGFSWRADMLKD*
Ga0062592_1000076796	3300004480	Soil	GWDLCREIRKPQPSEPPAIIMLTPEVSKMCAENSAKAGCDAWLAHPMHADDLARTVRHVLNAETDAPASADEALLGSKRCPGCESDSVRATLRVGSAQYYCCNACSFRWRAEMVKA*
Ga0062591_1027096512	3300004643	Soil	IIVLTPEVSRVCAEDSTKAGCSAWLAHPTIADDLARTVRQVLDYETDRPSSVDEALLGFKRCPVCESDMVRATLRVGAIQYYCCKACSFCWRAETMKT*
Ga0062594_1000238071	3300005093	Soil	EIRKPQPGEPPAIIMLTPEVSKICAENSAKVGCNAWLAHPMHADDLAHTVRQVLNAETDAPASLDEALLGSKRCPGCESDNVRATLRIGAVQYYTCNACSLCWRAEVAKA*
Ga0066688_110261881	3300005178	Soil	DVSRMCAEDSTKAGCNAWLTHPSLADDLARTVRQVLDYETDGPASVDEALLGFKTCPVCESDSVRPTLRVGAIQYYCCKACSFCWRAEALTKV*
Ga0066671_101576604	3300005184	Soil	RLPDMTGWELCREIKKPQQTDDGGEGPPIIVLTPDVSRMCAEDSTKAGCNAWLTHPSLADDLARTVRQVLDYETDGPASVDEALLGFKTCPVCESDSVRPTLRVGAIQYYCCKACSFCWRAEALTKV*
Ga0070676_108861222	3300005328	Miscanthus Rhizosphere	MSGWDLCREIRKPQPGEPPAIIMLTPEVSKICAENSAKVGCNAWLAHPMHADDLAHTVRQVLNAETDAPASLDEALLGSKRCPGCESDNVRATLRIGAVQYYTCNACSLCWRAEVAKA*
Ga0070687_1000359361	3300005343	Switchgrass Rhizosphere	ADDLAHTVRQVLNAETDAPASLDEALLGSKRCPGCESDNVRATLRIGAVQYYTCNACSLCWRAEVAKA*
Ga0070687_1001992063	3300005343	Switchgrass Rhizosphere	PMHADDLVRTVRQVLDAETDAPASLEEALLGSKKCPGCASDSVRATLRIGAIQYYSCKACSFHWRTDMVKT*
Ga0070687_1014141281	3300005343	Switchgrass Rhizosphere	SAKAGCNAWLAHPMHADDLVRTVRQVLNAETAAPASLDEALLGSRECPGCGSDSVRTTLRIGTVQYYCCKACSFCWRADMVKA*
Ga0070675_1000872046	3300005354	Miscanthus Rhizosphere	MSGWDLCREIRKPQPGEPPAIIMLTPEVSKMCAENSAKAGCNAWLAHPMHADDLAYTVRQVLNAETDAPASLDEALLGSKRCPGCESDSVRATLRIGAVQYYYCNACSYCWRAEMVKA*
Ga0070673_1008529493	3300005364	Switchgrass Rhizosphere	LAHPMHADDLAYTVRQVLNAETDAPASLDEALLGSKRCPGCESDSVRATLRIGAVQYYYCNACSYCWRAEMVKA*
Ga0070673_1020244111	3300005364	Switchgrass Rhizosphere	CNAWLAHPMHADDLVRTVRQVLSAETDAPASLEEALLGSKKCPGCESDSVRATLRIGPIQYYSCKACSFCWRADMVKA*
Ga0070688_1004578523	3300005365	Switchgrass Rhizosphere	LAHPTAADDLARTVRQVLDYETDAPASPDEALVGFKKCPVCESDTVRATLRVGAIQYYCCKTCNFCWRAEAMKA*
Ga0070688_1006752902	3300005365	Switchgrass Rhizosphere	CNAWLAHPMHADDLVRTVRQVLDAETDAPASLEEALLGSKKCPGCASDSVRATLRIGAIQYYSCKACSFHWRTDMVKT*
Ga0070700_1012546322	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MLTPEVSKICAENSAKAGCNAWLAHPMHADDLAYTVRQVLNAETDAPASLDEALLGSKRCPGCESDSVRATLRIGAVQYYYCNACSYCWRAEMVKA*
Ga0070678_1011608172	3300005456	Miscanthus Rhizosphere	SKMCAADSAKVGCHAWLAHPTVPDDLVRTVRQVLELDADAPSSIEDALVGLTSCPGCESDRVRAQLRVGPVQYFCCKACGFCWRMEVFATHP*
Ga0070706_1003969953	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	TKAGCSAWLAHPTIADDLARTVRQVLDYETDRPSSVDEALLGFKRCPVCESDMVRATLRVGAIQYYCCKACSFCWRAETMKT*
Ga0070698_1002850615	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	IMLTPEVSKMCAENSAKAGCNAWLAHPMHADDLAYTVRQVLNAETDAPASLDEALLGSKRCPGCESDSVRATLRIGAVQYYYCNACSYCWRAEMVKA*
Ga0070684_1020365142	3300005535	Corn Rhizosphere	NAWLAYPMHADDLVRTVRHVLDAQTDAPASLEEALLGSKRCPGCESDNVRATLRIGAVQYYTCNACSLCWRAEVAKA*
Ga0070686_1016641801	3300005544	Switchgrass Rhizosphere	CREIRKPQPAEPPPIIVLTPEVSKMCAENSAKVGCNAWLAHPMHADDLVRTVRQVLNAETDAPASLEEALLGSKKCPGCESDSVRATLRIGPIQYYSCKACSFCWRADMVKA*
Ga0070695_1008899711	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	GWDLCREIRKPQPNDPPAIIVLTPEVSKICAENSAKAGCDAWLAHPMHADDLARTVRHVLSSETDTPASLDEALLGLKHCPACDSETVRVALRVGSVQYYGCKTCGFSWRADMLKD*
Ga0070695_1009283701	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	CSAWLAHPTIADDLARTVRQVLDYESDEPGSVDEALLGFKRCPVCESDAVRATLRVGAIQYYCCKACSFCWRAETMKT*
Ga0070696_1000591007	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	TVADDLARTVRQVLDAEIDAPASAEEALVGLKNCPVCESPTIRATLRVGGIQHYCCKACSFCWRAEVLAQKV*
Ga0070704_1003617633	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	AHPTVADDLARTVRQVLDTEADAPASADEALVGLKNCPACESHTVRARLRVGAVQYYCCKACGFCWRAEVIAEKVKV*
Ga0070704_1010344231	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	TAADDLARTVRQVLDTDTDAPASADEALIGLKNCPVCESVSIRATLRAGTVQYYCCKTCSFCWRAEVLAGKV*
Ga0070664_1017509351	3300005564	Corn Rhizosphere	GGGPPIIVLTPEVSRMCAEDSTKAGCSAWLAHPTIADDLARTVRQVLDYETDRPSSVDEALLGFKRCPVCESDMVRATLRVGAIQYYCCKACSFCWRAETMKT*
Ga0070664_1018879721	3300005564	Corn Rhizosphere	NAWLAHPMHADDLVRTVRQVLSAETDAPASLEEALLGSKKCPGCESDSVRATLRIGPIQYYSCKACSFCWRADMVKA*
Ga0068864_1013268831	3300005618	Switchgrass Rhizosphere	RLPDMTGWDLCREIRKPQAGDPPPIIVLTPEVSKLCAEDSAKSGCSAWLAHPTAGDELARTVRQVLDYETDAPASPDEALVGFKKCPVCESDTVRATLRVGAIQYYCCKTCNFCWRAEAMKA*
Ga0068864_1024510322	3300005618	Switchgrass Rhizosphere	WLAHPMHADDLAHTVRQVLNAETDAPASLDEALLGSKRCPGCESDNVRATLRIGAVQYYTCNACSLCWRAEVAKP*
Ga0068863_1008092553	3300005841	Switchgrass Rhizosphere	HPMHADDLVRTVRHVLDAETDAPASLEEALLGSKRCPGCGSDNVRATLRVGAVQYYCCMACSFRWRSEMVKA*
Ga0097621_1005027853	3300006237	Miscanthus Rhizosphere	NEPPAIIVLAPEVSKMSAENSAKIGCNAWLAYPMHADDLVRTVRHVLDAQTDAPASLEEALLGSKRCPGCGSDNVRATLRVGAVQYYCCMACSFRWRSEMVKA*
Ga0075433_102382551	3300006852	Populus Rhizosphere	DLCREIRKPRAGDAEPTPIIVLTPEVSKMCAEDSTKAGCSAWLAHPTIADDLARTVRQVLDYETNAPSSVDEALLGFKRCPVCESDTVRATLRVGAIQYYCCKACSFCWRAEAMKA*
Ga0075425_1001957256	3300006854	Populus Rhizosphere	YAENSAKVGCNAWLAHPMHADELARTVRHVLSAETDTPTSVADALLGVKHCPACDSETVRMALRVGSVQYFSCKTCSFSWRADMLKD*
Ga0075434_1025815992	3300006871	Populus Rhizosphere	PPVIVLTPEVSRVCAEDSAKAGCSAWLAHPTIADDLARTVRQVLDYETDAPSSVDEALLGFKRCPVCESDTVRATLRVGPIQYYACKACSFCWRAETMKA*
Ga0075426_110565261	3300006903	Populus Rhizosphere	AWLAHPTIADDLARTVRQVLDLGADAPASADEALVGFKRCPVCEAETVRATLRVGAIQYYCCRTCSFCWRAEAFKA*
Ga0075435_1014308451	3300007076	Populus Rhizosphere	DPPAIIVLTPEVSKICAENSAKAGCNAWLAHPMHADDLARTVRHVLSSETDTPASLDEALVGLKHCPACDSETVRVALRVGSVQYYGCKTCSFSWRADMLKD*
Ga0111539_127848652	3300009094	Populus Rhizosphere	LTPEVSKLCAENSAKAGCHAWLAHPMHADDLARTVRQVLNAETDAPASVDEALLGFKRCPGCESDSVRATLRVGSIQYYCCKACSFCWRAEMVKA*
Ga0075418_105979331	3300009100	Populus Rhizosphere	NSAKVGCNAWLAHPMHADDLAHTVRRVLNKETDAPASLDEALLGSKKCPGCESDSVRATLRIGAVQYYTCNACGFSWRAETLKA*
Ga0075418_124332411	3300009100	Populus Rhizosphere	HPMHADDLAYTVRQVLNAETDAPASLDEALLGSKRCPGCESDSVRATLRIGAVQYYYCNACSYCWRAEMVKA*
Ga0066709_1024537051	3300009137	Grasslands Soil	STKAGCSAWLAHPTIADDLARTVRQVLDYETDAPSSIDEALLGFKQCPVCESDTVRATLRVGMIQYYCCKACSFCWRAETLRKV*
Ga0105242_128053861	3300009176	Miscanthus Rhizosphere	KAGCNAWLAHPTVADDLARTVRQVLDSETDAPASVDEALVGLKNCPACESHTVRARLRVGAVQYYCCKACGFCWRAEAIAEKV*
Ga0105242_131525942	3300009176	Miscanthus Rhizosphere	LTAEVSKMCAADSAKAGCHAWLAHPTIAEDLATTVRQVLDYDTDAPSSMDDALLGFTTCPVCESDSVRSTLRVGVVQYYCCNACAFCWRAERLTPKA*
Ga0126380_105264623	3300010043	Tropical Forest Soil	SKICAENSAKAGCNAWLAHPMHADDLVRTVRQVLNAETDAPASLDEALLGSKKCPGCASDSVRATLRVGAIQYYCCKACSFCWRAEMVKA*
Ga0126384_105021991	3300010046	Tropical Forest Soil	NSAKAGCNAWLAHPMHADDLVRTVRQVLNAETDAPASLDEALLGSKKCPGCASDRVRATLRVGAIQYYCCKACSFCWRAEMVKA*
Ga0126319_11872023	3300010147	Soil	RNPANGDGPPIIVLTPEVSKMCAEDSTKSGCSAWLAHPTVAEDLARTVRQVLDYETGAPASADEALLGFKTCPGCESDTVRATLRVGAIQYYCCKACSFCWRAETLTKV*
Ga0126319_12963132	3300010147	Soil	RVIVLTPDVSKMCATDSAKVGCHAWLAHPTVPDDLVRTVRQVLELDADAPSSIEDALVGLTSCPGCESDQVRAQLRVGPVQYFCCKACGFCWRMEVFATHP*
Ga0126319_15800643	3300010147	Soil	ARTVRQVLDYKTDAPDSPQAALLGFKTCPVCESPAIRAALRVGLVQYYCCTACSFCWRAELLTEKA*
Ga0134065_104967161	3300010326	Grasslands Soil	KICAEDSTRAGCSAWLAHPTLAEDLARTVRQVLDYETDAPASADEALLGFKTCPGCESDTVRATLRVGAVQYYCCKACSFCWRAETLRKV*
Ga0134122_130379361	3300010400	Terrestrial Soil	KMCAEDSAKAGCNAWLAHPTVADDLARTVRQVLDTETDAPASPDEALVGLKNCPACESHTVRARLRVGAVQYYCCKACGFCWRAEVIAEKVKV*
Ga0134123_136031952	3300010403	Terrestrial Soil	CSAWLAHPTAADDLARTVRQVLDYETDAPASPDEALVGFKKCPVCESDTVRATLRVGAIQYYCCKTCNFCWRAEAMKA*
Ga0137441_11932241	3300011425	Soil	TIADDLAATVRYVLDYDTDAPASTDDALLGFTTCPVCESDSVRSTLRVGVVQYYCCKACAFCWRAELLTPRP*
Ga0137461_12249882	3300012040	Soil	CAADSAKAGCHAWLAHPTIAEDLAATVRHVLDYDTDAPVSTDDALMGFTTCPVCGSESVRSTLRVGVVQYYCCKACAFCWRAERLTPKA*
Ga0137344_11118231	3300012159	Soil	LCAADSTKAGCHAWLAHPTIAEDLATTVRQVLDYDTDAPSSTDDALLGFTTCPVCESDSVRSTLRVGVVQYYCCKACAFCWRAELLTPRP*
Ga0137365_108901662	3300012201	Vadose Zone Soil	CAEDSTKAGCSAWLAHPTVAEDLARTVRQVLDYETDAPASADEALLGFKTCPGCESDTVRATLRVGTIKYYCCKACSFCWRAETLTKV*
Ga0137380_106993773	3300012206	Vadose Zone Soil	SKMCAEDSTKAGCSAWLAHPTVAEDLARTVRQVLDYETDAPASADEALLGFKTCPGCESDSVRATLRVGTIQYYCCKACSFCWRAETLTKV*
Ga0150984_1035661153	3300012469	Avena Fatua Rhizosphere	WLAHPTVADDLARTVRQVLDYETDAPGSPQDALLGLKTCPVCESPAIRAALRVGLVQYYCCTACNFCWRAELLTEKA*
Ga0157350_10148223	3300012499	Unplanted Soil	KPQPGELPIIILTPEVSKMCAENSARVGCNAWLAHPMHADDLARTVRQVLNAETDAPASVDEALLGSKRCPGCESDSVRATLRIGSVQYYCCNACSFRWRAEMVKA*
Ga0157283_101145883	3300012907	Soil	AKVGCNAWLAHPMHADDLAHTVRQVLNADTDAPASLDEALLGSKKCPGCESDNVRATLRIGAVQYYTCNACSLCWRAEVAKA*
Ga0164300_102546661	3300012951	Soil	IIVLTPEVSKNCAENSAKVGCNAWLAHPMHADDLARTVRHVLSAETDTPTSVEEALLGVKHCPACDSEAVRMALRVGSVQYFCCKTCSFSWRADMLKD*
Ga0157380_110364441	3300014326	Switchgrass Rhizosphere	DMSGWDVCREIRKPQRDDPPRIIVLTPEVSKVCAADSAKAGCHAWLAHPTIADDLATTVRQVLDYDTDAPSSMDDALLGFTTCPVCESDSVRSTLRVGVIQYYCCKACAFCWRAELLTPKA*
Ga0180084_10948032	3300014874	Soil	RIIVLTPEVSKLCAADSAKAGCHAWLAHPTIAEDLATTVRQVLDYDTDAPSSMDDALLGFTTCPVCESDSVRSTLRVGVVQYYCCKACAFCWRAELLTPRP*
Ga0137420_10010364	3300015054	Vadose Zone Soil	IKKPQADDGPPIIVLTPEVSKMCAEDSAKAGCNAWLAHPTVADDLARTVRQVLDADSVAPASADEALLGLTACPVCESPSIRATLRVGAIQYYCCKACSFCWRAEALAGKM*
Ga0180079_10792352	3300015248	Soil	HPTIAEDLATTVRQVLDYDTDAPSSTDDALLGFTTCPVCESDSVRSTLRVGVVQYYCCKACAFCWRAERLTPKA*
Ga0132258_115339624	3300015371	Arabidopsis Rhizosphere	CREIRKPQLNEPPAIIVLAPEVSKMSAENSAKIGCNAWLAYPMHADDLVRTVRHVLDAQTDAPASLEEALLGSKRCPGCGSDNVRATLRVGAVQYYCCMACSFRWRSEMVKA*
Ga0132256_1008094261	3300015372	Arabidopsis Rhizosphere	VSKMCAEDSAKAGCNAWLAHPTVADDLARTVRQVLDAGTDAPASADEGLVGLKNCPACESHTVRARLRVGAVQYYCCKGCGFCWRAEVIAEKV*
Ga0132257_1001851245	3300015373	Arabidopsis Rhizosphere	APEVSKMSAENSAKIGCNAWLAYPMHADDLVRTVRHVLDAQTDAPASLEEALLGSKKCPGCGSDNVRATLRVGAVQYYCCMACSFRWRSEMVKA*
Ga0132257_1017230263	3300015373	Arabidopsis Rhizosphere	PHTNEAPPIIMLTPEVSKMCAEDSAKAGCNAWLAHPTVADDLARTVRQVLDTETGAPASADEALVGMKNCPGCESHKVRATLRVGAIQYYCCKACGFCWRAEVIAEKV*
Ga0132255_1001161991	3300015374	Arabidopsis Rhizosphere	PMHADDLVRTVRHVLDAQTDAPASLEEALLGSKRCPGCGSDNVRATLRVGAVQYYCCMACSFRWRSEMVKA*
Ga0180119_11112762	3300019228	Groundwater Sediment	AGCHAWLAHPTIAEDLATTVRQVLDYDTDAPSSTDDALLGFTTCPVCESDSVRSTLRVGVVQYYCCKACAFCWRAELLTPRP
Ga0180116_11490862	3300019229	Groundwater Sediment	PPRIIVLTPEVSKLCAADSAKAGCHAWLAHPTIAEDLATTVRQVLDYDTDAPSSTDDALLGFTTCPVCESDSVRSTLRVGVVQYYCCKACAFCWRAELLTPRP
Ga0180114_13243902	3300019232	Groundwater Sediment	TIAEDLATTVRQVLDYDTDAPSSMEDALLGFTTCPVCESDSVRSTLRVGVVQYYCCKACAFCWRAELLTPRP
Ga0184645_10201762	3300019233	Groundwater Sediment	LTPEVSKMCAADSAKVGCHAWLAHPTIAEDLGTTVRQVLDYDTDAPSSMDDALLGFTTCPVCESDSVRSTLRVGVVQYYCCKACAFCWRAERLTPKA
Ga0184645_13308161	3300019233	Groundwater Sediment	PTIAEDLATTVRHVLDYETDAPSSMEDALVGLTSCPVCESESVRSTLRVGVVQYYCCKACAFCWRAELMTPKA
Ga0184648_13499582	3300019249	Groundwater Sediment	QGDPPRIIVLTAEVSKMCAADSAKAGCHAWLAHPTIAEDLATTVRQVLDYASDAPVSMDDALLGFTTCPVCESDSVRSTLRVGVVQYYCCKACAFCWRAELLTPRP
Ga0184641_11289022	3300019254	Groundwater Sediment	PRIIVLTPEVSKMCAADSAKVGCHAWLAHPTIAEDLAITVRQVLDYDTDAPSSMDDALLGFTTCPVCESDNVRSTLRVGVVQYYCCKACAFCWRADLLTPKA
Ga0180115_11366492	3300019257	Groundwater Sediment	PRIIVLTPEVSKLCAADSAKAGCHAWLAHPTIAEDLATTVRQVLDYDTDAPSSTDDALLGFTTCPVCESDSVRSTLRVGVVQYYCCKACAFCWRAELLTPRP
Ga0184646_14289681	3300019259	Groundwater Sediment	PGQGDPPRIIVLTAEVSKMCAADSAKAGCHAWLAHPTIAEDLATTVRQVLDYDTDAPSSMDDALLGFTTCPVCESDSVRSTLRVGVVQYYCCKACAFCWRAERLTPKA
Ga0184642_10841081	3300019279	Groundwater Sediment	LVRTVRHVLDHETDATSSTEEALLGMTSCPVCGSDSVRSTLRVGPVQYYCCKACAFCWRAERLTQKA
Ga0193696_11141151	3300020016	Soil	MCAEDSAKAGCNAWLAHPTVAGDLARTVRQVLDAETDAPGSLDEALVGLKNCPGCESDTVRATLRVGAVQYYCCKACGFCWRAEVIAEKV
Ga0180113_11550441	3300020065	Groundwater Sediment	RKTGQGDPPRIIVLTAEVSKMCAADSAKAGCHAWLAHPTIAEDLATTVRQVLDYDTDAPSSTDDALLGFTTCPVCESDSVRSTLRVGVVQYYCCKACAFCWRAELLTPRP
Ga0182009_101155721	3300021445	Soil	PPPIIVLTPEVSRLCAEDSAKAGCSAWLAHPTAGDDLARTVRQVLDYETDAPASPDEALVGFKKCPVCESETVRATLRVGAIQYYCCRTCNFCWRAETMKA
Ga0182009_108008262	3300021445	Soil	REIRKPQSGDPPPIIVLTPEVSKMCAEDSAKAGCNAWLAHPTIADDLARTVRHVLDREIDAPATPDEALVGFKTCPVCEADTVRATLRVGVIQYYCCRTCSFCWRAEALKA
Ga0222622_110650782	3300022756	Groundwater Sediment	IAEDLATTVRQVLDYDTDAPSSMDDALMGFTTCPVCGSESVRSTLRVGVIQYYCCKACAFCWRAEMLAPKA
Ga0207645_106627672	3300025907	Miscanthus Rhizosphere	SGWDLCREIRKPQPGEPPAIIMLTPEVSKICAENSAKVGCNAWLAHPMHADDLAHTVRQVLNAETDAPASLDEALLGSKRCPGCESDNVRATLRIGAVQYYTCNACSLCWRAEVAKA
Ga0207684_105866272	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MCAADSAKAGCHAWLAHPTIAEDLATTVRQVLDYDTDAPSSMDDALLGFTTCPVCESDSVRSTLRVGVVQYYCCNACAFCWRAERLTPKA
Ga0207681_109223301	3300025923	Switchgrass Rhizosphere	IIVLTPEVSKICAENSAKAGCDAWLAHPMHADDLARTVRHVLSSETDTPASLDEALLGLKHCPACDSETVRVALRVGSVQYYGCKTCSFSWRADMLKD
Ga0207701_113008751	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	EIRKPQPNDPPAIIVLTPEVSKICAENSAKAGCDAWLAHPMHADDLARTVRHVLSSETDTPASLDEALLGLKHCPACDSETVRVALRVGSVQYYGCKTCSFSWRADMLKD
Ga0207701_115949852	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	EIRKPQPGEPPAIIMLTPEVSKICAENSAKVGCNAWLAHPMHADDLAHTVRQVLNAETDAPASLDEALLGSKRCPGCESDNVRATLRIGAVQYYTCNACSLCWRAEVAKA
Ga0207679_116118891	3300025945	Corn Rhizosphere	GWDLCREIRKPQPGEPPAIIMLTPEVSKMCAENSAKAGCNAWLAHPMHADDLAYTVRQVLNAETDAPASLDEALLGSKRCPGCESDSVRATLRIGAVQYYYCNACSYCWRAEMVKA
Ga0207679_117250991	3300025945	Corn Rhizosphere	PEVSRMCAEDSTKAGCSAWLAHPTIADDLARTVRQVLDYETDRPSSVDEALLGFKRCPVCESDMVRATLRVGAIQYYCCKACSFCWRAETMKT
Ga0207651_102535551	3300025960	Switchgrass Rhizosphere	PPPIIVLTPEVSKMCAENSAKVGCNAWLAHPMHADDLVRTVRQVLSAETDAPASLEEALLGSKKCPGCESDSVRATLRIGPIQYYSCKACSFCWRADMVKA
Ga0207640_120674011	3300025981	Corn Rhizosphere	NSAKAGCNAWLAHPMHADDLAYTVRQVLNAETDAPASLDEALLGSKRCPGCESDSVRATLRIGAVQYYYCNACSYCWRAEMVKA
Ga0207708_110199591	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MSGWDLCREIRKPQPGEPPSIIVLTPEVSKLCAENSAKVGCNAWLAHPMHADDLVRTVRQVLNAETDAPASLDEALVGPRKCPGCGSDNVRATLRVGAVQYYCCMACSFRWRSEMVKA
Ga0207676_100619286	3300026095	Switchgrass Rhizosphere	PEVSKICAENSAKVGCNAWLAHPMHADDLAHTVRQVLNAETDAPASLDEALLGSKRCPGCESDNVRATLRIGAVQYYTCNACSLCWRAEVAKA
Ga0209686_12058991	3300026315	Soil	TKAGCNAWLTHPSLADDLARTVRQVLDYETDGPASVDEALLGFKTCPVCESDSVRPTLRVGAIQYYCCKACSFCWRAEALTKV
Ga0209577_102804371	3300026552	Soil	AGCNAWLTHPSLADDLARTVRQVLDYETDGPASVDEALLGFKTCPVCESDSVRPTLRVGAIQYYCCKACSFCWRAEALTKV
Ga0209074_105658112	3300027787	Agricultural Soil	IRKPQPAEPPPIIVLTPEVSKMCAENSAKVGCNAWLAHPMHADDLVRTVRQVLNAETDAPASLEEALLGSKKCPGCESDSVRATLRIGPIQYYSCKACSFCWRADMVKA
Ga0209811_102474841	3300027821	Surface Soil	GPPIIVLTPEVSKMCAEDSTKSGCSAWLAHPTVAEDLARTVRQVLDYETGAPASADEALLGFKTCPGCESDTVRATLRVGGIQYYCCKACGFCWRAETLTKV
Ga0209814_103433613	3300027873	Populus Rhizosphere	QVLDYDTDAPSSMDDALLGFTTCPVCESDNVRSTLRVGVIQYYCCRACAFCWRAELLTPKAERPEPE
Ga0209814_104951472	3300027873	Populus Rhizosphere	NSAKAGCNAWIAHPMHADDLVRTVRQVLNAETDAPASLDEALLGSKRCPGCESDSVRATLRVGAIQYYRCKACGFCWRAEMVKA
Ga0307300_102567963	3300028880	Soil	NAWLAHPTLADDLARTVRQVLDYETDAPASPDEALLGLKTCPVCESSSIRPTLRVGAIQYYCCKACSFCWRAEALTRV
Ga0308189_102225112	3300031058	Soil	SKMCAEDSTKAGCSAWLAHPTVAEDLARTVRQVLDYETGAPASADEALLGFKTCPGCESDTVRATLRVGGIQYYCCKTCSFCWRAETLTKV
Ga0308197_101547491	3300031093	Soil	REIRKPKANDGDGPPIIVLTPEVSRMCAEDSTKAGCNAWLAHPTLADDLARTVRQVLDYETDAPASPDEALLGLKTCPVCESNSIRPTLRVGAVQYYCCKECSFCWRAEALAKV
Ga0308187_104977682	3300031114	Soil	TLADDLARTVRQVLDYETDAPASPDEALLGLKTCPVCESSSIRPTLRVGAIQYYCCKACSFCWRAEALTRV
Ga0307497_103504313	3300031226	Soil	EDSAKAGCNAWLARPTVADDLARTVRQVLDYETDAPASAQDALVGLKTCPVCESPTIRATLRVGLVQYYCCKACSFCWRAELLAEKA
Ga0170824_1088541111	3300031231	Forest Soil	EELARTVRQVLDYESGAPASADEALLGFKTCPGCESGTVRATLRVGAIQYYCCKTCGFCWRAETLTKV
Ga0307469_111898331	3300031720	Hardwood Forest Soil	ADDLARTVRQVLNAETDAPASVDEALLGFKRCPGCESDSVRATLRVGSVQYYCCKACSFCWRAEMIKP
Ga0307468_1018711892	3300031740	Hardwood Forest Soil	RHVLDYDTDAPESTDDALMGFTTCPVCGSESVRSTLRVGVVQYYCCKACAFCWRAELLTPKA
Ga0307473_115425112	3300031820	Hardwood Forest Soil	APPIIMLTPEVSKMCAEDSAKAGCNAWLAHPTVADDLARTVRQVLDAETDAPASADEALVGLKNCPACESHNLRATLRVGAIQYYCCKGCGFCWRAEVIAEKV
Ga0310904_101751023	3300031854	Soil	AIIVLAPEVSKMSAENSAKIGCNAWLAYPMHADDLVRTVRHVLDAQTDAPASLEEALLGSKRCPGCGSDNVRATLRVGAVQYYCCMACSFRWRSEMVKA
Ga0310884_107480431	3300031944	Soil	LAHPMHADDLAYTVRQVLNAETDAPASLDEALLGSKRCPGCESDSVRATLRIGAVQYYYCNACSYCWRAEMVKA
Ga0310902_112815922	3300032012	Soil	AGCNAWLAHPTIADDLATTVRQVLDYDTDAPSSMDDALLGFTTCPVCESDSVRSTLRVGVIQYYCCKACAFCWRAELLTPKA
Ga0310906_101356504	3300032013	Soil	AHPMHADDLAYTVRQVLNAETDAPASLDEALLGSKRCPGCESDSVRATLRIGAVQYYYCNACSYCWRAEMVKA
Ga0307471_1006562013	3300032180	Hardwood Forest Soil	AWLAHPMHADDLVRTVRQVLNADTDAPASLDEALLGSKRCPGCESDSVRATLRVGAVQYYCCKACGFCWRAEMVKA
Ga0307471_1034060412	3300032180	Hardwood Forest Soil	AHPTVADDLARTVRRVLDAESAAPASADEALLGLRACPVCESPSIRAALRVGAIQYYCCKACSFCWRAETLAGKM
Ga0310812_104824952	3300032421	Soil	AHPMHADDLVRTVRQVLNAETDAPASPEEALLGSKKCPGCESDSVRATLRIGPIQYYSCNVCRFCWRADMVKA
Ga0326726_101653202	3300033433	Peat Soil	MCAEDSTKTGCSAWLAHPTVAEDLARTVRQVLDYDTGAPASADEALLGFKTCPGCESDTVRATLRVGAIQYYCCETCSFCWRAETLTKV
Ga0364925_0066817_26_388	3300034147	Sediment	MSGWDLCREIRKPGQADPPRIIVLTPEVSKLCAADSTKAGCHAWLAHPTIAEDLATTVRQVLDYDTDAPSSTDDALLGFTTCPVCESDSVRSTLRVGVVQYYCCKACAFCWRAELLTPRP
Ga0364931_0060058_948_1151	3300034176	Sediment	LATTVRQVLDYDTDAPSSMDDALLGFTTCPVCESDSVRSTLRVGVVQYYCCKACAFCWRAELLTPRP
Ga0370545_116781_46_342	3300034643	Soil	VLTPEVSKMCAADSAKAGCHAWLAHPTIAEDLATTVRQVLDYDADAPSSMDDALMGFTTCPGCGSESVRSTLRVGLIQYYCCKACAFCWRAELLAPKA
Ga0314796_089433_447_650	3300034671	Soil	GDLVRTVRHVLDAETDAPASLEEALLGSKRCPGCGSDNVRATLRVGAVQYYCCMACSFRWRSEMVKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063790

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences