Metagenome Family F063789

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063789
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	104 residues
Representative Sequence	VVRRLVIAAILAISLGAPIVELFDSWDQTLQTGSDTEANVAVVALCIGVAFAIGTIVVVNRIRALASASARRVVLPLASPRPIASLLTPAPTVSPPAILRV
Number of Associated Samples	81
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.95 %
% of genes near scaffold ends (potentially truncated)	27.13 %
% of genes from short scaffolds (< 2000 bps)	84.50 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.946 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (20.155 % of family members)
Environment Ontology (ENVO)	Unclassified (36.434 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.814 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 59.69% β-sheet: 0.00% Coil/Unstructured: 40.31%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF13620	CarboxypepD_reg	26.36
PF01569	PAP2	4.65
PF07715	Plug	2.33
PF01451	LMWPc	1.55
PF03551	PadR	1.55
PF08281	Sigma70_r4_2	1.55
PF00903	Glyoxalase	1.55
PF00561	Abhydrolase_1	1.55
PF12833	HTH_18	0.78
PF00069	Pkinase	0.78
PF12695	Abhydrolase_5	0.78
PF10136	SpecificRecomb	0.78
PF00886	Ribosomal_S16	0.78
PF00171	Aldedh	0.78
PF10009	DUF2252	0.78
PF00291	PALP	0.78
PF12697	Abhydrolase_6	0.78
PF00106	adh_short	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.10
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.55
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.55
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.55
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.78
COG0228	Ribosomal protein S16	Translation, ribosomal structure and biogenesis [J]	0.78
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.78
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.95 %
Unclassified	root	N/A	17.05 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.95 %
Unclassified	root	N/A	17.05 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.95 %
Unclassified	root	N/A	17.05 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	59.69 %
Unclassified	root	N/A	17.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.43 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.43 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	55.04 %
Unclassified	root	N/A	17.05 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5.43 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.26 %
Unclassified	root	N/A	17.05 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.33 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.55 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.78 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.26 %
Unclassified	root	N/A	17.05 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.33 %
alpha proteobacterium U9-1i	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium U9-1i	0.78 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.78 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.78 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.26 %
Unclassified	root	N/A	17.05 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	2.33 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %
alpha proteobacterium U9-1i	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium U9-1i	0.78 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.26 %
Unclassified	root	N/A	17.05 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2.33 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.78 %
Salinispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora	0.78 %
alpha proteobacterium U9-1i	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium U9-1i	0.78 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	54.26 %
Unclassified	root	N/A	17.05 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	2.33 %
Bradyrhizobium sp. 6(2017)	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 6(2017)	0.78 %
Salinispora vitiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora vitiensis	0.78 %
alpha proteobacterium U9-1i	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium U9-1i	0.78 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10641143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300002568\|C688J35102_119152130	Not Available	646	Open in IMG/M
3300002568\|C688J35102_120913645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2268	Open in IMG/M
3300004081\|Ga0063454_100536475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300004081\|Ga0063454_100540792	Not Available	832	Open in IMG/M
3300004114\|Ga0062593_101086634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	829	Open in IMG/M
3300004156\|Ga0062589_101656641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora vitiensis	636	Open in IMG/M
3300004157\|Ga0062590_100038579	All Organisms → cellular organisms → Bacteria	2520	Open in IMG/M
3300004479\|Ga0062595_101921825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	568	Open in IMG/M
3300004633\|Ga0066395_10213953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1016	Open in IMG/M
3300004633\|Ga0066395_10423564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300004643\|Ga0062591_100103628	All Organisms → cellular organisms → Bacteria	1848	Open in IMG/M
3300005288\|Ga0065714_10468291	Not Available	542	Open in IMG/M
3300005332\|Ga0066388_100198437	All Organisms → cellular organisms → Bacteria	2626	Open in IMG/M
3300005332\|Ga0066388_100404476	All Organisms → cellular organisms → Bacteria	2010	Open in IMG/M
3300005332\|Ga0066388_101163842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1314	Open in IMG/M
3300005332\|Ga0066388_101225978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1285	Open in IMG/M
3300005332\|Ga0066388_101887997	Not Available	1066	Open in IMG/M
3300005332\|Ga0066388_105300317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300005343\|Ga0070687_101150229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300005356\|Ga0070674_100735637	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300005518\|Ga0070699_100067026	All Organisms → cellular organisms → Bacteria → Proteobacteria	3117	Open in IMG/M
3300005536\|Ga0070697_100789529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 6(2017)	840	Open in IMG/M
3300005713\|Ga0066905_100151431	All Organisms → cellular organisms → Bacteria → Acidobacteria	1671	Open in IMG/M
3300005764\|Ga0066903_100052006	All Organisms → cellular organisms → Bacteria → Proteobacteria	5003	Open in IMG/M
3300005764\|Ga0066903_100060886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4717	Open in IMG/M
3300005764\|Ga0066903_100204010	All Organisms → cellular organisms → Bacteria → Acidobacteria	2964	Open in IMG/M
3300005764\|Ga0066903_100271479	All Organisms → cellular organisms → Bacteria	2646	Open in IMG/M
3300005764\|Ga0066903_104820377	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300005985\|Ga0081539_10369024	Not Available	600	Open in IMG/M
3300006046\|Ga0066652_101221752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300006237\|Ga0097621_100507257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1093	Open in IMG/M
3300006844\|Ga0075428_102110659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300006845\|Ga0075421_100453327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1532	Open in IMG/M
3300006852\|Ga0075433_10021969	All Organisms → cellular organisms → Bacteria → Proteobacteria	5354	Open in IMG/M
3300006852\|Ga0075433_10158617	All Organisms → cellular organisms → Bacteria → Proteobacteria	2013	Open in IMG/M
3300006852\|Ga0075433_10339224	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300006852\|Ga0075433_10918137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	763	Open in IMG/M
3300006852\|Ga0075433_11279686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300006854\|Ga0075425_100886374	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300006854\|Ga0075425_101686943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300006880\|Ga0075429_101466731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	594	Open in IMG/M
3300006904\|Ga0075424_101362834	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300006904\|Ga0075424_102314258	Not Available	564	Open in IMG/M
3300006914\|Ga0075436_101209803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300006969\|Ga0075419_11498174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	506	Open in IMG/M
3300007076\|Ga0075435_101097686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	695	Open in IMG/M
3300009094\|Ga0111539_10124854	All Organisms → cellular organisms → Bacteria	3016	Open in IMG/M
3300009100\|Ga0075418_10371731	All Organisms → cellular organisms → Bacteria → Acidobacteria	1527	Open in IMG/M
3300009137\|Ga0066709_102903774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300009147\|Ga0114129_10028606	All Organisms → cellular organisms → Bacteria	7896	Open in IMG/M
3300009147\|Ga0114129_10525836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1542	Open in IMG/M
3300009147\|Ga0114129_10547205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1506	Open in IMG/M
3300009147\|Ga0114129_11353142	Not Available	880	Open in IMG/M
3300009147\|Ga0114129_11392015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	866	Open in IMG/M
3300009147\|Ga0114129_11505210	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300009156\|Ga0111538_10300143	All Organisms → cellular organisms → Bacteria	2032	Open in IMG/M
3300009162\|Ga0075423_10422111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1400	Open in IMG/M
3300009177\|Ga0105248_10069271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3961	Open in IMG/M
3300010043\|Ga0126380_11310476	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300010046\|Ga0126384_10025580	All Organisms → cellular organisms → Bacteria → Proteobacteria	3858	Open in IMG/M
3300010047\|Ga0126382_10168051	All Organisms → cellular organisms → Bacteria → Acidobacteria	1524	Open in IMG/M
3300010336\|Ga0134071_10717181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300010359\|Ga0126376_10888777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300010362\|Ga0126377_10248232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1731	Open in IMG/M
3300010362\|Ga0126377_11336869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300010362\|Ga0126377_13513538	Not Available	507	Open in IMG/M
3300010362\|Ga0126377_13601009	Not Available	501	Open in IMG/M
3300010398\|Ga0126383_13153180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300010400\|Ga0134122_11899063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300010401\|Ga0134121_10667413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982	Open in IMG/M
3300012203\|Ga0137399_10670827	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872	Open in IMG/M
3300012212\|Ga0150985_101935206	Not Available	515	Open in IMG/M
3300012212\|Ga0150985_107702228	Not Available	786	Open in IMG/M
3300012212\|Ga0150985_107977270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300012212\|Ga0150985_113195398	Not Available	814	Open in IMG/M
3300012212\|Ga0150985_116975891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300012212\|Ga0150985_119876019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1823	Open in IMG/M
3300012212\|Ga0150985_120107428	Not Available	670	Open in IMG/M
3300012362\|Ga0137361_10425286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1220	Open in IMG/M
3300012469\|Ga0150984_108140446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
3300012469\|Ga0150984_109864949	Not Available	621	Open in IMG/M
3300012469\|Ga0150984_110857312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1155	Open in IMG/M
3300012469\|Ga0150984_112737027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300012469\|Ga0150984_113166066	Not Available	546	Open in IMG/M
3300012922\|Ga0137394_10123276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2195	Open in IMG/M
3300012922\|Ga0137394_10887074	Not Available	745	Open in IMG/M
3300012923\|Ga0137359_11602073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300012925\|Ga0137419_10692789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300012929\|Ga0137404_10565731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1019	Open in IMG/M
3300012930\|Ga0137407_10753290	Not Available	919	Open in IMG/M
3300012944\|Ga0137410_11844628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300012948\|Ga0126375_10482837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300012948\|Ga0126375_11608829	Not Available	560	Open in IMG/M
3300012955\|Ga0164298_10135936	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300012955\|Ga0164298_11331886	Not Available	551	Open in IMG/M
3300012957\|Ga0164303_11288523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300012960\|Ga0164301_10110564	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300012971\|Ga0126369_12948634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300012977\|Ga0134087_10340601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300012984\|Ga0164309_10273443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1204	Open in IMG/M
3300013297\|Ga0157378_12349248	Not Available	585	Open in IMG/M
3300013308\|Ga0157375_13184317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300015242\|Ga0137412_10793112	Not Available	696	Open in IMG/M
3300015371\|Ga0132258_10738120	All Organisms → cellular organisms → Bacteria	2480	Open in IMG/M
3300015371\|Ga0132258_10842173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2314	Open in IMG/M
3300015371\|Ga0132258_12221828	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1377	Open in IMG/M
3300015371\|Ga0132258_13579004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1063	Open in IMG/M
3300015372\|Ga0132256_100976338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium U9-1i	963	Open in IMG/M
3300015372\|Ga0132256_101533518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	777	Open in IMG/M
3300015372\|Ga0132256_103092896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300015373\|Ga0132257_102599942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300015374\|Ga0132255_100152580	All Organisms → cellular organisms → Bacteria	3221	Open in IMG/M
3300015374\|Ga0132255_100681311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1525	Open in IMG/M
3300015374\|Ga0132255_105239447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300015374\|Ga0132255_106144602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300018431\|Ga0066655_10628642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300018468\|Ga0066662_12244807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300018482\|Ga0066669_10757867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300025926\|Ga0207659_11606736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300025960\|Ga0207651_10213893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1554	Open in IMG/M
3300027874\|Ga0209465_10120721	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300027874\|Ga0209465_10403103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300027909\|Ga0209382_10513810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1317	Open in IMG/M
3300031199\|Ga0307495_10151664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300031716\|Ga0310813_10817933	All Organisms → cellular organisms → Bacteria → Acidobacteria	840	Open in IMG/M
3300031858\|Ga0310892_10858471	Not Available	633	Open in IMG/M
3300031908\|Ga0310900_10471327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300032017\|Ga0310899_10279369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	54.26%
Host-Associated	Host-Associated	45.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.26%
Plants	Host-Associated → Plants	45.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.01%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.95%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.48%
Loam	Environmental → Terrestrial → Soil → Loam	18.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	13.18%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	13.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.53%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	20.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	6.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.43%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	5.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.88%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.33%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_106411432	3300001686	Soil	SSRRNDPVATSNPSNSTVVAEHIAFKFSRAVPSYTRVRLQTVLRRLAIAAILAVSIGAPIAELFDGWDQTLQTGNDTEANVAVVALCIGVAFAIGTIVVINRIRVLASASARRVVLSLAPPRRIASFLTPAPTVSPPATLRV*
C688J35102_1191521301	3300002568	Soil	MPSIASPTLQFLSSTRPDTGVTLRVVVRRLAIAAILAISLGAPIAELFDTWDQTLPTGSDTEANMVVVVLCVGVAFAIGTIVVLDRIRALASSFARRLIVVLAPLRNNASFLKPVPTASPPLALRV*
C688J35102_1209136453	3300002568	Soil	VLRRLAIAAILAVSIGAPIAELFDGWDQTLQTGNDTEANVAVVALCIGVAFAIGTIVVINRIRVLASASARRVVLSLAPPRRIASFLTPAPTVSPPATLRV*
Ga0063454_1005364751	3300004081	Soil	DGDIKCLHSIMVPERIALKRSRALDEYARVRLRTVLRRLAIAAILAISIGAPIAELFDSWDQTLQTGNDTEANVAVVALCIGVAFAIGTIVVINRIRVLASASARRVVLSLAPPRQRASFLTPAPTVSPPATLRV*
Ga0063454_1005407922	3300004081	Soil	SSLPWRSWTARNAKALPARLVSCCVLSSTRPDTRVTLRVVVRRLAVAAILAISLGAPIAELFDTWDQTLPTGSDTEANMVVVVLCVGIAFAIGTIVVLDRIRALASSFARRLIVVLAPLRNNASFLKPVPTASPPLALRV*
Ga0062593_1010866341	3300004114	Soil	LIHACYTREVVRRLAIAAILAIALGAPVAELFDSWDQALPTGSDTEANMVVVVLCVGVAFAIGTIVIISRIRALASSSRQRVVVRSAPREIASLLRPAPTVSPPAVLRV*
Ga0062589_1016566411	3300004156	Soil	ERAAELPRLFKVVREARHLIHACYTREAVRRLAIAAILAIALGAPVAELFDSWDQALPTGSDTEANMVVVVLCVGVAFAIGTIVIISRIRALASSSRQRVVVRSAPREIASLLRPAPTVSPPAVLRV*
Ga0062590_1000385794	3300004157	Soil	LIHACYTREAVRRLAIAAILAIALGAPVAELFDSWDQALPTGSDTEANMVVVVLCVGVAFAIGTIVIISRIRALASSSRQRVVVRSAPREIASLLRPAPTVSPPAVLRV*
Ga0062595_1019218251	3300004479	Soil	VVRRLVIAAILAISLGAPIVELFDSWDQTLQTGSDTEANVAVVALCIGVAFAIGTIVVVNRIRALASASARRVVLPLASPRPIASLLTPAPTVSPPAILRV*
Ga0066395_102139532	3300004633	Tropical Forest Soil	VTRRLAIAAIIAISLGGPIVEMFDQWDQTLQDGNDTEANAVVVALCVGVAFAIGTIVVVNRIRALSSTSARHVVVPRAASRDVASFLGPSPTSSPPTILRV*
Ga0066395_104235642	3300004633	Tropical Forest Soil	VRRLTIAAILAISLGAPIAELFDTWDQTLQTGNDTEATMVVVALCVGVAFAISTIAIVSRIRASASASATGLVVLAAVCEITLLLRPAPTVSPPAILRV*
Ga0062591_1001036283	3300004643	Soil	VRRLAIAAILAIALGAPVAELFDSWDQALPTGSDTEANMVVVVLCVGVAFAIGTIVIISRIRALASSSRQRVVVRSAPREIASLLRPAPTVSPPAVLRV*
Ga0065714_104682911	3300005288	Miscanthus Rhizosphere	GRPEAEQRRRYTRVTLGEVLRRLAIAAILVLSLGAPIAELFDSWDQAVEVGNDTEANVVVVALCVGVAFAIGTIVIVNRIRGLASASVRRVVLSRTIRREIASLLAPSPTVSPPAILRV*
Ga0066388_1001984373	3300005332	Tropical Forest Soil	LAITAILAVCLGAQLVEMFDRWDPSVQDGHDTEANLVVVALCVGVAFAIGTIVVVTRIRALASASAMRDVASRVVIREIASPLIPIPTSSPPAILRV*
Ga0066388_1004044762	3300005332	Tropical Forest Soil	VVRRLAIAAILAISLGAPIAELFDSWDRTLETGNDTEANVVVAALCIGVAFAIGTLVIVSRIRSLASASVRRVVRSLSAAREIASFLTPAPTVSPPAILRV*
Ga0066388_1011638421	3300005332	Tropical Forest Soil	VVRRLAIAAILAVSLGAPIAELFDSWDQTLQTGSDTEANAVVVALCVGVAFAIGTIVVVSCMRAVASRSARRVVLSLAPAREIASLLTPAPTVNPPAILRV*
Ga0066388_1012259781	3300005332	Tropical Forest Soil	YTRVTLRIVVRRLAIAAILAISLGAPVAELFDSWDQNLQDGSDTEANVAVVVLCVGVAFAIGTIIVVDHIRALASSSAGRVAVPLEAPREIASLLRPAPTVSPPAILRV*
Ga0066388_1018879972	3300005332	Tropical Forest Soil	VVRRLIIVAILAVSFSAPIAELVDSWDQTLQTGSDTEANAVVVALCVGVAFAIGTIVVVTRIRALASTSARRVVLSLTTAREIASLLTTAPTVSPPPILRV*
Ga0066388_1053003171	3300005332	Tropical Forest Soil	VLHSGLVVRRLAIATILAISLGGPIAELFDSWDQQLQAGSDTEANVVVVALCVGVAFAIGTIVTVNRIRALASSSASRVLVLAPLREIASLLTPAPTVSPPFALRV*
Ga0070687_1011502292	3300005343	Switchgrass Rhizosphere	VLRRLAIAAVLSLGAPIAELFDTWDQTLQTGSDTEANVAVVALCIGVAFAIGTIVIVKRIRAFASASATRVGVLSRSAPREIASLLAPAPTVS
Ga0070674_1007356372	3300005356	Miscanthus Rhizosphere	VLRRLAIAAVLVLSLGAPIAELFDSWDQALEAGNDTEANVVVVALCIGIAFAIGTIVVVNRIRALASASVRRVVLSRTIQREIASLLAPSPTVSPPAILRV*
Ga0070699_1000670265	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VLRRLAIAAILAVSLGAPIAELFDSWDQTLQTGSDTEANAVVVALCIGVAFAIGTIVVVNRLRALASVSARRIILSRAAPRDTAFYLAPAPTARPPAILRV*
Ga0070697_1007895291	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VLRRLAIAAILAVSLGAPIAELFDSWDQTLQTGSDTEANAVVVALCIGVAFAIGTIVVVNRLRALASVSARRIILSRAAPRDTA
Ga0066905_1001514312	3300005713	Tropical Forest Soil	VRRLAIAAILAICLGAPIAELFDSWDQDLQAGNDTEANVVVVVLCVGVAFAIGTIVVINRIRGLASSSAGRVVAPVAAPQAIVSLLRPAPTVSPPAILRV*
Ga0066903_1000520065	3300005764	Tropical Forest Soil	VRRLAIAAILTISLGAPVAELFDSWDQNLQDGSDTEANVAVVVLCVGVAFAIGTIVVVDHIRALASSSAGRVAVPLEAPREIASLLRPAPTVSPPAILRV*
Ga0066903_1000608863	3300005764	Tropical Forest Soil	VLQCVYVTRRLAIAAIIAISLGGPIVEMFDQWDQTLQDGNDTEANAVVVALCVGVAFAIGTIVVVNRIRALSSTSARHVVVPRAASRDVASFLGPSPTSSPPTILRV*
Ga0066903_1002040102	3300005764	Tropical Forest Soil	VVRRLAIAAILAISLGAPIAELFDSWDPPLQTGSDTEANMVVVALCVGVAFAVGTIVVVNRIRALASSSAGRVVSARAAPREIASLLRPEPTISPPPLLRV*
Ga0066903_1002714792	3300005764	Tropical Forest Soil	VKALPIRLVSGLYYAELNRVLDTRVLHFAIVVRRLAIAATLAISLGAPIAELFDSWDQHLQASSDTEANMVVVALCVGVAFAIGTIVVVSRIRALASSSARRVVVVLARPQEIASLLTPAPTVSPPLALRV*
Ga0066903_1048203772	3300005764	Tropical Forest Soil	AVVRRLTIAAILAISLGAPIAELFDTWDQTLQTGNDTEATMVVVALCVGVAFAISTIAIVSRIRASASASATGLVVLAAVCEITLLLRPAPTVSPPAILRV*
Ga0081539_103690241	3300005985	Tabebuia Heterophylla Rhizosphere	VVRRLAIAAILAISLGAPIAELFDTWDQTLATGSDTEANMVVVVLCVGLAFAIGTVVIINRIRSLASSSARRVIAVASAPRGIASFLEPSPTVSPPAILRV*
Ga0066652_1012217521	3300006046	Soil	VLRRLAIAAILAISIGAPIVELFDSWDQTLQTGSDTEANVVVVALCIGVALAIGTIGVVKRIRALASASTTRIALLRAAPRQLAFLLLLTPAPTVSPPAILRV*
Ga0097621_1005072572	3300006237	Miscanthus Rhizosphere	VKLSRDARYTHVTLRIVLRRLAIVAVLAISLGAPIAELFDTWDQTLQTGSDTEANAVVVALCIGVAFAIGTIVVVNRIRSLASASHTRVVLSRAAPREIASLLRPAPTVSPPAILRV*
Ga0075428_1021106591	3300006844	Populus Rhizosphere	VLRRLAAAAILAISIGAPIAELFDSWDQTLQTGSDTEANVAVVALCVGVAFAIGTIVVVNRIRALASTSARGGVLSRAAPREIASLLRPAPTVSPPAILRV*
Ga0075421_1004533273	3300006845	Populus Rhizosphere	VKLSRGARYTRVTLRTVLRRLAIAAILAVSLGAPIAELFDSWDQTLQTGSDTEANAVVVALCIGVAFAIGTIVVVNRLRALASVSERRIILSRAAPRETASFLAPAPTASPPAILRV*
Ga0075433_100219693	3300006852	Populus Rhizosphere	VVRRLAIAAILAIALGAPVAELFDSWDQALPTGSDTEANMVVVVLCVGVAFAIGTIVIINRIRALASSSTKRVVVVAALREIASLLRPAPTVSPPAVLRV*
Ga0075433_101586174	3300006852	Populus Rhizosphere	VKLSRGARYTRVTLRTVLRRLAIAAILAVSLGAPIAELFDSWDQTLQTGSDTEANAVVVALCIGVAFAIGTIVVVNRLRALASVSERRIILPRAAPRETASFLAPAPTASPPAILRV*
Ga0075433_103392242	3300006852	Populus Rhizosphere	VVRRLVIVAILAISLGAPIVELFDSWDQTLQTGSDTEANVAVVALCIGVAFAIGTIVVVNRIRALASASARRMALPLASPRPIASLLTPAPTVSPPAILRV*
Ga0075433_109181372	3300006852	Populus Rhizosphere	VVRRLVIAAILAISLGAPIVELVDSWDQTLQTGSDTEANVAVVALCIGVAFAIGTIVVVNRIRALASASARRVALPLASPRPIASLLTPAPTVSPPAILRV*
Ga0075433_112796862	3300006852	Populus Rhizosphere	VQRRLAIAAIIAIALGAPIAELFDSWDQTLETGSDTEANVAVVALCIGVAFAIGTIVIVNRLRALASVSARRVVLSRAAPREIASFLAPAPTVSPPAILRV*
Ga0075425_1008863741	3300006854	Populus Rhizosphere	MAAQPGARYTRVTLRSVVRRLVIAAILAISLGAPIVELVDSWDQTLQTGSDTEANVAVVALCIGVAFAIGTIVVVNRIRALASASARRVALPLASPRPIASLLTPAPTVSPPAILRV*
Ga0075425_1016869431	3300006854	Populus Rhizosphere	VNVSRGARYTRVTLRKVQRRLAIAAIIAITLGAPIAELFDRWDQTLQTGSDTEASVAVVALCIGVAFALGTIVVVNRLRALASVSARRVVLPRAVPRELASLLTPAPTVSPPAILRV*
Ga0075429_1014667311	3300006880	Populus Rhizosphere	VVRRLVIAAILAVSLGAPIVELFDSWDQTLQTGSDTEANVAVVAMCIGVAFAIGTIVVVNRIRALASASARRVALPLASPRPIASLLIPAPTVSPPATLRV*
Ga0075424_1013628342	3300006904	Populus Rhizosphere	VKLSRGARYTRVTLRTVLRRLAIAAILAVSLGAPVAELFDSWDQTLQTGSDTEANAVVVALCIGVAFAIGTIVVVNRLRALASVSERRIILSRAAPRETASFLAPAPTASPPAILRV*
Ga0075424_1023142581	3300006904	Populus Rhizosphere	ERAAKLPRLFKVVREARHLIHACYTREVVRRLAIAAILAIALGAPVAELFDSWDQALPTGSDTEANMVVVVLCVGVAFAIGTIVIINRIRALASSSTKRVVVLSAPREIASLLRPAPTVSPPAVLRV*
Ga0075436_1012098032	3300006914	Populus Rhizosphere	TRVTLRKVQRRLAIAAIIAITLGAPIAELFDRWDQTLQTGSDTEASVAVVALCIGVAFALGTIVVVNRLRALASVSARRVVLPRAVPRELASLLTPAPTVSPPAILRV*
Ga0075419_114981741	3300006969	Populus Rhizosphere	VVRRLVIAAILAISLGAPIVELFDSWDETLQTGSDTEANVAVVALCIGVAFAIGTIVVVNRIRALASASARRVALPLASPRPIASRLVPAPTVSPPAILRV*
Ga0075435_1010976862	3300007076	Populus Rhizosphere	VVRRLVIVAILAISLGAPIVELFDSWDQTLQTGSDTEANVAVVALCIGVAFAIGTIVVVNRIRALASASARRVALPLASPRPIASLLTPAPTVSPPAILRV*
Ga0111539_101248543	3300009094	Populus Rhizosphere	VVRRLAIAAILAIALGAPVAELFNRWDQALPTGSDTEANMVVVVLCVGVAFAIGTIVIINRIRALASSSRQRVVVRSAPREIASLLRPAPTVSPPAVLRV*
Ga0075418_103717312	3300009100	Populus Rhizosphere	VVRRLAIAAILAIALGAPVAELFDSWDQSLPTGSDTEANMVVVVLCVGVAFAIGTIIIVNRIRTLASSSTKRVVVLAAPREIASLLRPAPTVSPPAVLRV*
Ga0066709_1029037741	3300009137	Grasslands Soil	VLRRLAIAAILAISIGAPTVELFDSWDQTLQTGSDTEANVAVVALCIGVAFAIGTIVVVNRIRALASASARRVVLSRATPRQIAFLLRPAPTVSPPAILRV*
Ga0114129_1002860612	3300009147	Populus Rhizosphere	VARRLAIAAIIAITIGGPIVEMFDRWDQTLQDGNDTEANVVVVALCVGVTFAIGPIVVVNRIRALSSTSVMRVVVSHVAPREIASFLGPLPTSSPPTILRV*
Ga0114129_105258362	3300009147	Populus Rhizosphere	VLRRLAIAAILAVSLGAPIAELFDSWDQTLQTGSDTEANAVVVALCIGVAFAIGTIVVVNRLRALASVSERRIILSRAAPRETASFLAPAPTASPPAILRV*
Ga0114129_105472052	3300009147	Populus Rhizosphere	VVRRLAIAAILAIAFGAPVAELFDRWDQALPTGSDTEANMVVVVLCVGIAFAIGTIVIINRIRALASSSRQRVVVRSAPREIASLLRPAPTVSPPAVLRV*
Ga0114129_113531421	3300009147	Populus Rhizosphere	VVRRLAIAAILAIALGAPVAELFDSWDQSLPTGSDTEANMVVVVLCVGVAFAIGTIIIVNRIRTLASSSTKRVVVLAAPREIASLFRPAPTVSPPAVLRV*
Ga0114129_113920152	3300009147	Populus Rhizosphere	VLRRLAIAAILAISIGAPIAELFDSWDQTLQTGSDTEANVAVVALCVGVAFAIGTIVVVNRIRALASASARVVLSSAAPRKIASLLRPAPTVSPPAILRV*
Ga0114129_115052101	3300009147	Populus Rhizosphere	VLRRLATAVILAVSLGAPIVELFDGWDQTLQTGSDTEANVAVVALCIGVAFAVGTIVIVNRIRALASLSARRVVLSRPAPRGITSVLRPAPTVSPPAILRV*
Ga0111538_103001432	3300009156	Populus Rhizosphere	VVRRLAIAAILAIALGAPVAELFDSWDQALPTGSDTEANMVVVVLCVGVAFAIGTIVIINRIRALASSSRQRVVVRSAPREIASLLRPAPTVSPPAVLRV*
Ga0075423_104221112	3300009162	Populus Rhizosphere	VLRRLAIAAILAVSLGAPVAELFDSWDQTLQTGSDTEANAVVVALCIGVAFAIGTIVVVNRLRALASVSERRIILPRAAPRETASFVAPAPTASPPTILRV*
Ga0105248_100692713	3300009177	Switchgrass Rhizosphere	VSRRLVIVAVIAIALGAPIAELFDSWDETLQSGSDTEANVAVVALCIGVAFAIGTIVIVSRIHALASAPAGRVVQFRAAKREIAAFLAPAPTVSPPAILRV*
Ga0126380_113104761	3300010043	Tropical Forest Soil	VVRRLAIAAILAISLGAPVAELFDSWDQNLQDGSDTEANVAVVVLCVGVAFAIGTIIVVDHIRALASSSAGRVAVPLEAPREIA
Ga0126384_100255802	3300010046	Tropical Forest Soil	VRRLAIAAILAISLGAPVAELFDSWDQNLQDGSDTEANVAVVVLCVGVAFAIGTIIVVDHIRALASSSAGRVAVPLEAPREIASLLRPAPTVSPPAILRV*
Ga0126382_101680513	3300010047	Tropical Forest Soil	VVRRLAIAAILAISLGAPIAELFDSWDQDLQAGNDTEANVVVVVLCVGVAFAIGTIVVINRIRGLASSSAGRVVEPVAEPQAIVSLLRPAPTVSPPAILRV*
Ga0134071_107171811	3300010336	Grasslands Soil	VAIAAILAISIGAPIVELFDSWDQTLQTGSDTEANVAVVALCIGVAFAIGAIVVVNRLRALASASTRRVVLSRAVPRQIASLLTPAPTVSPPAILRV*
Ga0126376_108887772	3300010359	Tropical Forest Soil	VLHSEIVVRRLVIAAILAVSLGAPIAELFDTWDQTLQTGSDTEANVAVVALCIGVAFAIGTIVVVNRIRTLGSSSGRCVVVSLAPAREMTSFLRPAPTVSPPAILRV*
Ga0126377_102482323	3300010362	Tropical Forest Soil	VVRRLVIAAILAISLGAPIAELFDSWDQALQTGNDTEANMVVVALCVGVAFAIGTIVVVNRIRALASSYAGRIVSALAAAGETESLLRPAPTISPPAVLRV*
Ga0126377_113368691	3300010362	Tropical Forest Soil	VVRRLAIAAILAICLGAPIAELFDSWDQDLQAGNDTEANVVVVVLCVGVAFAIGTIVVINRIRGLASSSAGRVVAPVAAPQAIVSLLRPAPTVSPPAILRV*
Ga0126377_135135381	3300010362	Tropical Forest Soil	NVVRRLAIAAILAVSLGAPIAELFDSWDQRLQTGSDTEANAVVVALCVGVVFAIGTIVVVTCMRAVASRSARRVVLSLAPAREIASLLTPAPTVSPPAILRV*
Ga0126377_136010091	3300010362	Tropical Forest Soil	VVRRLAVAAILAISLGAPIAELFDTWDQTLPTGSDTEANMVVVVLCVGVAFAIGTIVVTNRIRDLASRSARRVVVVLSAPREIASFLEPSPTVSPPAILRV*
Ga0126383_131531801	3300010398	Tropical Forest Soil	VTRRLAIAAIIAISLGGPIVEMFDQWDQTLQDGNDTEANAVVVALCVGVAFAIGTIVVVNRIRALSSTSARHVVVPRAASRDVASFL
Ga0134122_118990631	3300010400	Terrestrial Soil	VVRRLIIAAILAISLGAPIVELFDSWDQTLQTGSDTEANVAVVALCIGVAFAIGTIVVVNRIRALASTSASRAVLSRAAPREIASLLRPAPTVSPPAILRV*
Ga0134121_106674132	3300010401	Terrestrial Soil	VLRRLAIVAVLAISLGAPITELFDTWDQTLQTGSDTEANAVVVALCIGVAFAIGTIVVVNRIRSLASASHTRVVLSRAAPREIASLLRPAPTVSPPAILRV*
Ga0137399_106708272	3300012203	Vadose Zone Soil	VLRRLAIAAILAISIGAPIVELFDSWDQTLQTGSDTEADVAVVALCVGAAFAIGTIVVVNRIRALASASARRVVLSRAAPRQIAFLLIPAPTVSPPAILRV*
Ga0150985_1019352061	3300012212	Avena Fatua Rhizosphere	RLAIAAVLAVSLGAPIAELFDSWDQALQIGNDSEANVTVVALCIGVAFAIGTIVDVDRIRAFASASARRMVLSVATAHRMESLLPPAPTVSPPAILRV*
Ga0150985_1077022281	3300012212	Avena Fatua Rhizosphere	MARRLFIAAILAIAIGAPIVELFDSWDQSIDAGSDTEANVAVVALCVGVAFAIGTIVIDSRIRALSSTSAGRFVGTRVAVRDVASVLVPVPTVSPPAVLRV*
Ga0150985_1079772701	3300012212	Avena Fatua Rhizosphere	VVRRLAIAAILAVSLGAPIAELFDSWDQTLQTGSDTEANAVVVVLCVGVAFAIGTIVVVNRIRALASASARRVVLSLAAPRKIASLLGPAPTVSPPPILRV*
Ga0150985_1131953982	3300012212	Avena Fatua Rhizosphere	VAILAISIGAPIAELFDSWDQALPAGSDTEANVAVVALCLGVAFAIGTIVLVDRLHALAPASLSRIVLSRTAPRELVSFLRPAPTVSPPAILRV*
Ga0150985_1169758912	3300012212	Avena Fatua Rhizosphere	LAIAAILAISIGAPIAELFDSWDQTLQTGNDTEANVAVVALCIGVAFAIGTIVVINRIRVLASASARRVVLSLAPPRRIASFLTPAPTVSPPATLRV*
Ga0150985_1198760191	3300012212	Avena Fatua Rhizosphere	FAIVAILAISLGAPIAELFDTWDQTLQTGDDTEANVAVVALCIGVAFAIGTIVVVNRIRALASTSARRIVRSRAAPREIAALLSPAPTVSPPAILRV*
Ga0150985_1201074281	3300012212	Avena Fatua Rhizosphere	VVRRLAVAAILAISLGAPIAELFDTWDQTLPTGSDTEANMVVVVLCVGIAFAIGTIVVLDRIRALASSSARRLIVVLAPLRDNASFLKPVPTASPPLALRV*
Ga0137361_104252862	3300012362	Vadose Zone Soil	VLRRLAIAAILAIGIGAPIVELFDSWDQTLQTGSDTEANVAVVALCVGVAFAIGTIVVVNRIRAFASTSARRVVLSRAASRQIASLLTPAPTVSPPAILRV*
Ga0150984_1081404462	3300012469	Avena Fatua Rhizosphere	RRFAIMAILAISLGAPIAELFDTWDQTLQTGDDTEANVAVVALCIGVAFAIGTIVVVNRIRALASTSARRIVRSRAAPREIAALLSPAPTVSPPAILRV*
Ga0150984_1098649491	3300012469	Avena Fatua Rhizosphere	VLRRLAIAAVLAVSLGAPIAELFDSWDQALQIGNDSEANVTVVALCIGVAFAIGTIVVVDRIRAFASASARRMVLSVATAHRMESLLPPAPTVSPPAILRV*
Ga0150984_1108573122	3300012469	Avena Fatua Rhizosphere	VLRRLAIAAILAISIGAPIAELFDSWDQTLQTGNDTEANVALVALCIGVAFAIGTIVVINRIRVLASASARRVVLSLAPPRRIASFLTPAPTVSPPATLRV*
Ga0150984_1127370271	3300012469	Avena Fatua Rhizosphere	RLAIAAILAISIGAPIVELFDSWDQTLQTGSDTEANVAVVALCVGIAFAIGTIAVVNRIRALASASFTRVVLSRAAPRQIASLLTPAPTVSPPAILRV*
Ga0150984_1131660661	3300012469	Avena Fatua Rhizosphere	RLFIAAILAIAIGAPIVELFDSWDQSIDAGSDTEANVAVVALCVGVAFAIGTIVIDSRIRALSSTSAGRFVGTRVAVRDVASVLAPVPTVSPPAVLRV*
Ga0137394_101232762	3300012922	Vadose Zone Soil	VLRRLAIAAILAISIGAPIAELFDSWDQTIETGSDTEANLAVVALCIGVAFAIGTIVVVNRIRALASASARRVVLSRAAPRQIASFLTPAPTVSPPAILRV*
Ga0137394_108870741	3300012922	Vadose Zone Soil	VVRRLVIAVILAISLGAPIAELFDSWDQALPAGSDTEANVAVVALCIGVAFAIGTIVLVDRLRALASASLSRVVLSRAAPRELASLRPAPTVSPPAILRV*
Ga0137359_116020732	3300012923	Vadose Zone Soil	AAILAISIGAPIVELFDSWDQTLQTGSDTEANVAVVALCVGVAFAIGTIVVVNRIRAFASTSARRVVLPRATPRQIAFLLIPAPTVSPPAILRV*
Ga0137419_106927891	3300012925	Vadose Zone Soil	VRRRLAIAAILVISIGAPIVEVFDSWDQTLQTGSDTEANVAVVALCIGVAFAIGTIVVNRIRALASASARRVVLSRAAPRQIAFLLIPAPTVSPPAILRV*
Ga0137404_105657312	3300012929	Vadose Zone Soil	SIGAPIAELFDSWDQTLQTGSDTEANVAVVALCIGVAFAIGTIVVVNRIRAFASTSARRVVLPRATPRQIAFLLIPAPTVSPPAILRV*
Ga0137407_107532901	3300012930	Vadose Zone Soil	VVRRLAIAAILAISLGAPIAELFDSWDQALPAGSDTEANVAVVALCIGVAFAIGTIVLVDRLSAFASASLSRIVLSRAAPRELASLLRPAPTVSLPAILRV*
Ga0137410_118446281	3300012944	Vadose Zone Soil	VLRRLAIAAILAISIGAPIVELFDSWDQTLQTGSDTEANVAVVALCIGVAFAIGTMVVVNRIRALASASARRVVLSRAAPRQIASLLTPAPTVSPPAILRV*
Ga0126375_104828372	3300012948	Tropical Forest Soil	VVRRLAIAAILAISLGAPVAELFDSWDQNLQDGSDTEANVAVVVLCVGVAFAIGTIVVVDHIRALASSSAGRVAVPLEAPREIASLLRPAPTVSPPAILRV*
Ga0126375_116088292	3300012948	Tropical Forest Soil	IAELFDSWDQTLQTGSDTEANAVVVALCVGVVFAIGTIVVVTCMRAVASRSARRVVLSLAPAREIASLLTPAPTVNPPAILRV*
Ga0164298_101359362	3300012955	Soil	MWDVIALRNVTSQLSLAGRYTRVTLGSVVRRLVIAAILAISLGAPIVELFDSWDQTLQTGSDTEANVAVVALCIGVAFAIGTIVVVNRIRALASASARRVALPLASPRPIASLLIPAPTVSPPAILRV*
Ga0164298_113318861	3300012955	Soil	VVRRLAIAAILAIALGAPVAELFDSWDQALPTGSDTEANMVVVVLCVGVAFAIGTIIIVNRIRALASSSTKRVVVLAAPREIASLLRPAPTVSPPAVLRV*
Ga0164303_112885231	3300012957	Soil	VVRRLVIAAILAISLGAPIVELFDSWDQTLQTGSDTEANVAVVALCIGVAFAIGTIVVVNRIRALASASARRVALPLASPRPIASLLIPAPTVSPPAILRV*
Ga0164301_101105642	3300012960	Soil	VVRRLVIAAILAISLGAPIVELFDSWDQTLQTGSDTEANVAVVALCSGVAFAIVTSVVGNRIRALASASARRVALPLASPRPIASLLIPAPTVSPPAILRV*
Ga0126369_129486341	3300012971	Tropical Forest Soil	VVRRLAIAAILTISLGAPVAELFDSWDQNLQDGSDTEANVAVVVLCVGVAFAIGTIVVVDHIRALASSSAGRVAVPLEAPREIASLLRPAPTVSPPAILRV*
Ga0134087_103406011	3300012977	Grasslands Soil	VAIAAILAISIGAPIVELFDSWDQTLQTGSDTEANAAVVALCIGVAFAIGTIVVVNRIRALASASARRVVLSRAAPRQIASLLTPEPTVSPPAILRV*
Ga0164309_102734432	3300012984	Soil	CYSRSVLSRLAITAILVVSLGAPIAELFDSWDHGLDAGSDTEANAVVVALCIGVAFAIGTIVIVDRLRALASASVSRVILSRAVQHELVLLPAPAATISPPAILRV*
Ga0157378_123492481	3300013297	Miscanthus Rhizosphere	VIVAILAIALGAPVVELFDSWDQAPQSGSDTEANMVVVVLCAGIAFAIGTIAIIDRIRALASSSNKRVVVLGASREIASLLKPAPTVSPPAVLRV*
Ga0157375_131843171	3300013308	Miscanthus Rhizosphere	AAILAITLGAPIVELFDSWDQTLPTGSDTEANVAVVALCIGVAFAIGTIVIVNRIRALASASVSRVALSRAAPREIAFLLAPAPTVSPPAILRV*
Ga0137412_107931122	3300015242	Vadose Zone Soil	VVRRLAIAAILAISLGAPIAELFDSWDQALPAGSDTEANVAVVALCIGVAFAIGTIVLVDRLRALGSASHTRAVLSRTAPFELASLLRPAPTVSPPAILRV*
Ga0132258_107381203	3300015371	Arabidopsis Rhizosphere	VVRRFAIAAILAIALGAPVAELFDSWDQTLQTGSDTEANMVVVVLCVGVAFAIGTIVIINRIRALASSSTTRVVVLAAPREIASLLRPAPTVSPPAVLRA*
Ga0132258_108421733	3300015371	Arabidopsis Rhizosphere	VVRRLAIAAILAISLGAPIVELFDSWDQALPTGSDTEANVAVVALCVGVAFAIGTIVLVDRLRALASASLSRIVLSRAAPRELASLLRPAPTVSPPAILRV*
Ga0132258_122218281	3300015371	Arabidopsis Rhizosphere	AISLGAPIVELFDSWDQTLQTGSDTEANVAVVALCIGVAFAIGTIVVVNRIRALASASARRVALPLASPRPIASLLIPAPTVSPPAILRV*
Ga0132258_135790041	3300015371	Arabidopsis Rhizosphere	VVRRLIIAAILAVSLGAPIVELFDSWDQTLQTGSDTEANVAVVALCIGVAFAIGTIVVVNRIRALASASARRVALPLASPRPIASLLLPAPTVSPPAILRV*
Ga0132256_1009763381	3300015372	Arabidopsis Rhizosphere	VVRRLAIAAILAIALGAPVAELFDSWDQALPTGSDTEANMVVVVLCVGVAFALGTIVIISRIRALASSSRQRVVVRSAPREIASLLRPAPTVSPPAVLRV*
Ga0132256_1015335182	3300015372	Arabidopsis Rhizosphere	VVRRLAIAAILAISLGAPIVELFDSWDQALPTGSDTEANVAVVALCVGVAFAIGTIVLVDRLRALASASLSRIVLSRAAPRELASLLRPTPTVSPPAILRV*
Ga0132256_1030928962	3300015372	Arabidopsis Rhizosphere	VVRRLIIAAILTISLGAPILELFDSWDQTLQTGSDTEANVAVVALCIGVAFAIGTIVVVNRIRALASASARRVALPLASPRPIASLLIPAPTVSPPAILRV*
Ga0132257_1025999421	3300015373	Arabidopsis Rhizosphere	LPRLFKVVREARHLIHRCYTREVVRRLAIAAILAIALGAPVAELFDSWDQTLQTGSDTEANMVVVVLCVGVAFAIGTIVIINRIRALASSSTTRVVVLAAPREIASLLRPAPTVSPPAVLRA*
Ga0132255_1001525803	3300015374	Arabidopsis Rhizosphere	VVRRLAIAAILAIALGAPVAELFDSWDQVLPAGSDTEANMVVVVLCVGVAFAIGTIVIINHIRALASSSAKRVVVVSAPREIAFLLRPAPTVSPPAVLRV*
Ga0132255_1006813112	3300015374	Arabidopsis Rhizosphere	VVRRLAIAAILAISLGAPIVELFDSWDQALPTGSDTEANVAVVALCVGVAFAIGTIVLVDRLHALASASLSRIVLSRAAPRELASLLRPAPTVSPPAILRV*
Ga0132255_1052394471	3300015374	Arabidopsis Rhizosphere	VLRRLAIAAILAISLGAPIAELFDSWDETLQTGSDTEANVAVVALCIGVAFAIGTIVVVNRIRALASASARRVALPLASPRPIASLLLPAPTVSPPAILRV*
Ga0132255_1061446021	3300015374	Arabidopsis Rhizosphere	AISLGAPIVELFDSWDQTLQTGSDTEANVAVVALCIGVAFAIGTIVVVNRIRALASASARRVALPLASPRAIASFLVPAPTVSPPAILRV*
Ga0066655_106286421	3300018431	Grasslands Soil	VAIAAILAISISAPIAEPFDSWDQTLQTGSDTEANVVVVALCVGVAFAIGTIVVVNRLRALASVSTRRVVLSRAAPRQIAFFLTPAPTVSPPAILRV
Ga0066662_122448072	3300018468	Grasslands Soil	LAISIGAPIAELFDSWDQTLQTGNDTEANVALVALSIGVAFAIGTIVVINRIRVLTSASARRVVLSRAAPRQIASLLTPEPTVSPPAILRV
Ga0066669_107578672	3300018482	Grasslands Soil	VAIAAILAISIGAPIVELFDSWDPTLQTGSDTEANVAVVALCIGVAFAIGTIVVVNRIRALASASARRVVLSLAPPRHIASFHIPAPTVSPPATLRV
Ga0207659_116067361	3300025926	Miscanthus Rhizosphere	LRRLAIAAVLVLSLGAPIAELFDSWDQALEAGNDTEANVVVVALCIGIAFAIGTIVVVNRIRALASASVRRVVLSRTIQREIASLLAPSPTVSPPAILRV
Ga0207651_102138932	3300025960	Switchgrass Rhizosphere	ILVLSLGAPIAELFDSWDQAVEVGNDTEANVVVVALCVGVAFAIGTIVIVNRIRGLASASVRRVVLSRTIRREIASLLAPSPTVSPPAILRV
Ga0209465_101207212	3300027874	Tropical Forest Soil	VLQCVYVTRRLAIAAIIAISLGGPIVEMFDQWDQTLQDGNDTEANAVVVALCVGVAFAIGTIVVVNRIRALSSTSARHVVVPRAASRDVASFLGPSPTSSPPTILRV
Ga0209465_104031032	3300027874	Tropical Forest Soil	VRRLTIAAILAISLGAPIAELFDTWDQTLQTGNDTEATMVVVALCVGVAFAISTIAIVSRIRASASASATGLVVLAAVCEITLLLRPAPTVSPPAILRV
Ga0209382_105138102	3300027909	Populus Rhizosphere	VKLSRGARYTRVTLRTVLRRLAIAAILAVSLGAPIAELFDSWDQTLQTGSDTEANAVVVALCIGVAFAIGTIVVVNRLRALASVSERRIILSRAAPRETASFLAPAPTASPPAILRV
Ga0307495_101516641	3300031199	Soil	VKLSRAARYTRVTLRTVPRRLVIAAIIAITLGAPIAELFDTWDQTLQTGSDTEANVAVVALCIGVAFAIGTIVIVKRIHACASASTRRVVLSRSVPREIASLLAPAPTVSPPAILRV
Ga0310813_108179332	3300031716	Soil	RDRRRHPRCRSGKRSHPSACYTRSVVRRLAIAAILAISLGAPIAELFDTWDQTLPAGDDTEANMVVVALCAGVAFAIGTVVVIDRIRNLASCSAERVVAVLASRREVASFLRPAPTVSPPTILRV
Ga0310892_108584712	3300031858	Soil	VVRRLAIAAILAIALGAPVAELFDSWDQALPTGSDTEANMVVVVLCVGVAFAIGTIVMISRIRALASSSRQRVVVRSAPREIASLLRPAPTVSPPAVLRV
Ga0310900_104713271	3300031908	Soil	IHACYTREVVRRLAIAAILAIALGAPVAELFDSWDQALPTGSDTEANMVVVVLCVGVAFAIGTIVIISRIRALASSSRQRVVVRSAPREIASLLRPAPTVSPPAVLRV
Ga0310899_102793691	3300032017	Soil	VVRRLIIAAILAISLGAPIVELFDSWDQTLQTGSDTEANVAVVALCIGVAFAIGTIVVVNRIRALASASARRVALPLASPRPIASLLIPAPTVSPPAILRV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063789

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences