Metagenome / Metatranscriptome Family F063748

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063748
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	93 residues
Representative Sequence	MPGGDIFGQILRDVLGGAVGGPTQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHLDNIQSVFDRFFGAQQR
Number of Associated Samples	87
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.73 %
% of genes near scaffold ends (potentially truncated)	79.07 %
% of genes from short scaffolds (< 2000 bps)	91.47 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.116 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.008 % of family members)
Environment Ontology (ENVO)	Unclassified (55.814 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.465 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.83% β-sheet: 0.00% Coil/Unstructured: 55.17%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF04228	Zn_peptidase	24.81
PF04226	Transgly_assoc	20.93
PF04011	LemA	8.53
PF06078	DUF937	3.88
PF01758	SBF	3.10
PF16868	NMT1_3	1.55
PF00912	Transgly	0.78
PF08734	GYD	0.78
PF04279	IspA	0.78
PF13548	DUF4126	0.78
PF12002	MgsA_C	0.78
PF02357	NusG	0.78
PF00437	T2SSE	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG2321	Predicted metalloprotease	General function prediction only [R]	24.81
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	20.93
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	8.53
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	3.88
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	0.78
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG2917	Intracellular septation protein A	Cell cycle control, cell division, chromosome partitioning [D]	0.78
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.78
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	0.78
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.12 %
Unclassified	root	N/A	34.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.12 %
Unclassified	root	N/A	34.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.12 %
Unclassified	root	N/A	34.88 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	49.61 %
Unclassified	root	N/A	34.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.78 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	36.43 %
Unclassified	root	N/A	34.88 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	28.68 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.78 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.88 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	10.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.33 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.78 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.78 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.88 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	10.85 %
Aquamicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquamicrobium	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.78 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.88 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	10.85 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.78 %
Aquamicrobium defluvii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquamicrobium → Aquamicrobium defluvii	0.78 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.78 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.88 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	10.85 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.78 %
Aquamicrobium defluvii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquamicrobium → Aquamicrobium defluvii	0.78 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.78 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y02FO01S	Not Available	511	Open in IMG/M
3300004114\|Ga0062593_100019743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3522	Open in IMG/M
3300005332\|Ga0066388_100025827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	5343	Open in IMG/M
3300005332\|Ga0066388_102907737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	875	Open in IMG/M
3300005332\|Ga0066388_104729637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquamicrobium → Aquamicrobium defluvii	693	Open in IMG/M
3300005332\|Ga0066388_108400709	Not Available	514	Open in IMG/M
3300005471\|Ga0070698_100395046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1316	Open in IMG/M
3300005518\|Ga0070699_100339685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1351	Open in IMG/M
3300005614\|Ga0068856_100729877	All Organisms → cellular organisms → Bacteria → Proteobacteria	1011	Open in IMG/M
3300005764\|Ga0066903_102119534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1083	Open in IMG/M
3300005764\|Ga0066903_102293693	All Organisms → cellular organisms → Bacteria → Proteobacteria	1042	Open in IMG/M
3300005764\|Ga0066903_104501454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	743	Open in IMG/M
3300005764\|Ga0066903_104632417	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300005843\|Ga0068860_102709760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	514	Open in IMG/M
3300005983\|Ga0081540_1064662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1725	Open in IMG/M
3300006354\|Ga0075021_10376424	All Organisms → cellular organisms → Bacteria → Proteobacteria	888	Open in IMG/M
3300006606\|Ga0074062_10572507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	515	Open in IMG/M
3300006847\|Ga0075431_101783063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	572	Open in IMG/M
3300006871\|Ga0075434_101143441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	791	Open in IMG/M
3300009792\|Ga0126374_10322338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1046	Open in IMG/M
3300010046\|Ga0126384_10568128	Not Available	988	Open in IMG/M
3300010046\|Ga0126384_11286513	Not Available	678	Open in IMG/M
3300010047\|Ga0126382_11672970	Not Available	593	Open in IMG/M
3300010048\|Ga0126373_11868993	All Organisms → cellular organisms → Bacteria → Proteobacteria	664	Open in IMG/M
3300010359\|Ga0126376_10501952	All Organisms → cellular organisms → Bacteria → Proteobacteria	1123	Open in IMG/M
3300010361\|Ga0126378_11297012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	823	Open in IMG/M
3300010361\|Ga0126378_11754167	All Organisms → cellular organisms → Bacteria → Proteobacteria	706	Open in IMG/M
3300010376\|Ga0126381_101012387	All Organisms → cellular organisms → Bacteria → Proteobacteria	1199	Open in IMG/M
3300010376\|Ga0126381_102322306	All Organisms → cellular organisms → Bacteria → Proteobacteria	770	Open in IMG/M
3300010398\|Ga0126383_10750623	Not Available	1056	Open in IMG/M
3300010398\|Ga0126383_11531967	All Organisms → cellular organisms → Bacteria → Proteobacteria	756	Open in IMG/M
3300010398\|Ga0126383_13622568	Not Available	505	Open in IMG/M
3300010401\|Ga0134121_10163725	All Organisms → cellular organisms → Bacteria	1904	Open in IMG/M
3300012202\|Ga0137363_11059647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	689	Open in IMG/M
3300012361\|Ga0137360_10277773	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300012948\|Ga0126375_10406346	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300012948\|Ga0126375_10490869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	913	Open in IMG/M
3300012957\|Ga0164303_11288910	Not Available	540	Open in IMG/M
3300012958\|Ga0164299_10406527	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300012958\|Ga0164299_10563301	Not Available	771	Open in IMG/M
3300012971\|Ga0126369_10757597	All Organisms → cellular organisms → Bacteria → Proteobacteria	1051	Open in IMG/M
3300012971\|Ga0126369_13567373	Not Available	510	Open in IMG/M
3300012984\|Ga0164309_10179355	Not Available	1438	Open in IMG/M
3300014296\|Ga0075344_1095601	Not Available	600	Open in IMG/M
3300014297\|Ga0075306_1105357	Not Available	544	Open in IMG/M
3300015371\|Ga0132258_13975059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1004	Open in IMG/M
3300015372\|Ga0132256_101948861	Not Available	694	Open in IMG/M
3300015373\|Ga0132257_100955335	Not Available	1077	Open in IMG/M
3300015373\|Ga0132257_101842875	All Organisms → cellular organisms → Bacteria → Proteobacteria	778	Open in IMG/M
3300015374\|Ga0132255_100824843	Not Available	1383	Open in IMG/M
3300016270\|Ga0182036_10153246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1644	Open in IMG/M
3300016294\|Ga0182041_11260408	Not Available	675	Open in IMG/M
3300016294\|Ga0182041_11439792	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300016294\|Ga0182041_11481989	Not Available	624	Open in IMG/M
3300016294\|Ga0182041_11671651	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300016319\|Ga0182033_11115571	Not Available	705	Open in IMG/M
3300016319\|Ga0182033_11657077	Not Available	579	Open in IMG/M
3300016319\|Ga0182033_12052462	Not Available	521	Open in IMG/M
3300016341\|Ga0182035_11989400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	528	Open in IMG/M
3300016357\|Ga0182032_10015402	All Organisms → cellular organisms → Bacteria	4300	Open in IMG/M
3300016371\|Ga0182034_10022179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3819	Open in IMG/M
3300016371\|Ga0182034_10522498	Not Available	993	Open in IMG/M
3300016387\|Ga0182040_10269448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1288	Open in IMG/M
3300016404\|Ga0182037_11438212	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	610	Open in IMG/M
3300016404\|Ga0182037_11702129	Not Available	562	Open in IMG/M
3300016422\|Ga0182039_10092865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2205	Open in IMG/M
3300016422\|Ga0182039_11749195	Not Available	569	Open in IMG/M
3300016445\|Ga0182038_10189626	Not Available	1608	Open in IMG/M
3300016445\|Ga0182038_10538159	Not Available	1001	Open in IMG/M
3300016445\|Ga0182038_10763950	Not Available	845	Open in IMG/M
3300017792\|Ga0163161_11377214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	615	Open in IMG/M
3300017970\|Ga0187783_10092262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2231	Open in IMG/M
3300021560\|Ga0126371_10409713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1498	Open in IMG/M
3300026551\|Ga0209648_10433814	Not Available	831	Open in IMG/M
3300026817\|Ga0207775_120000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	502	Open in IMG/M
3300027680\|Ga0207826_1166154	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300031545\|Ga0318541_10158021	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M
3300031572\|Ga0318515_10127578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1348	Open in IMG/M
3300031573\|Ga0310915_11118054	Not Available	547	Open in IMG/M
3300031682\|Ga0318560_10059249	All Organisms → cellular organisms → Bacteria → Proteobacteria	1906	Open in IMG/M
3300031736\|Ga0318501_10786137	Not Available	527	Open in IMG/M
3300031744\|Ga0306918_11089286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	619	Open in IMG/M
3300031744\|Ga0306918_11163646	All Organisms → cellular organisms → Bacteria → Proteobacteria	596	Open in IMG/M
3300031770\|Ga0318521_10311305	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300031770\|Ga0318521_10901899	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300031770\|Ga0318521_11041265	Not Available	502	Open in IMG/M
3300031781\|Ga0318547_10793812	All Organisms → cellular organisms → Bacteria → Proteobacteria	590	Open in IMG/M
3300031805\|Ga0318497_10832809	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300031821\|Ga0318567_10075995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1782	Open in IMG/M
3300031833\|Ga0310917_10890895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	599	Open in IMG/M
3300031879\|Ga0306919_10868294	Not Available	692	Open in IMG/M
3300031890\|Ga0306925_10452977	All Organisms → cellular organisms → Bacteria → Proteobacteria	1371	Open in IMG/M
3300031890\|Ga0306925_10482152	Not Available	1323	Open in IMG/M
3300031890\|Ga0306925_10846082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	945	Open in IMG/M
3300031893\|Ga0318536_10131632	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300031897\|Ga0318520_10793824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	594	Open in IMG/M
3300031910\|Ga0306923_10037718	All Organisms → cellular organisms → Bacteria	5257	Open in IMG/M
3300031910\|Ga0306923_10201876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2273	Open in IMG/M
3300031910\|Ga0306923_11819124	Not Available	625	Open in IMG/M
3300031910\|Ga0306923_12044162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	580	Open in IMG/M
3300031912\|Ga0306921_10192127	All Organisms → cellular organisms → Bacteria	2393	Open in IMG/M
3300031912\|Ga0306921_11543722	Not Available	724	Open in IMG/M
3300031912\|Ga0306921_12449154	Not Available	543	Open in IMG/M
3300031941\|Ga0310912_10428787	Not Available	1030	Open in IMG/M
3300031941\|Ga0310912_11252130	All Organisms → cellular organisms → Bacteria → Proteobacteria	563	Open in IMG/M
3300031942\|Ga0310916_10078514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2604	Open in IMG/M
3300031945\|Ga0310913_10262501	Not Available	1215	Open in IMG/M
3300031946\|Ga0310910_11251968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	574	Open in IMG/M
3300031947\|Ga0310909_10709287	Not Available	835	Open in IMG/M
3300031954\|Ga0306926_10227025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2317	Open in IMG/M
3300031954\|Ga0306926_10713337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1215	Open in IMG/M
3300031954\|Ga0306926_11950499	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300031959\|Ga0318530_10069277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1362	Open in IMG/M
3300031981\|Ga0318531_10100894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1271	Open in IMG/M
3300032041\|Ga0318549_10123054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1144	Open in IMG/M
3300032044\|Ga0318558_10597039	Not Available	552	Open in IMG/M
3300032052\|Ga0318506_10265315	Not Available	761	Open in IMG/M
3300032054\|Ga0318570_10314614	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300032059\|Ga0318533_10253352	Not Available	1271	Open in IMG/M
3300032059\|Ga0318533_10356157	Not Available	1066	Open in IMG/M
3300032068\|Ga0318553_10153688	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300032076\|Ga0306924_11088744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	872	Open in IMG/M
3300032076\|Ga0306924_12347179	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300032205\|Ga0307472_100839963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	844	Open in IMG/M
3300032261\|Ga0306920_101794415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	866	Open in IMG/M
3300032261\|Ga0306920_101935011	Not Available	828	Open in IMG/M
3300033289\|Ga0310914_10208302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1747	Open in IMG/M
3300033289\|Ga0310914_11523900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	572	Open in IMG/M
3300033290\|Ga0318519_11023820	Not Available	513	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.70%
Host-Associated	Host-Associated	8.53%
Engineered	Engineered	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.92%
Plants	Host-Associated → Plants	8.53%
Aquatic	Environmental → Aquatic	0.78%
Solid Waste	Engineered → Solid Waste	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.33%
Sediment	Environmental → Aquatic → Sediment	0.78%
Grass	Engineered → Solid Waste → Grass	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.29%
Loam	Environmental → Terrestrial → Soil → Loam	9.30%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.10%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.10%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%
Composting	Engineered → Solid Waste → Grass → Composting	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	56.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.10%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.10%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.10%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.55%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.55%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014296	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D1	Environmental	Open in IMG/M
3300014297	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLC_D1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026817	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 17 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_03519930	2170459017	Switchgrass, Maize And Mischanthus Litter	GQHGPVPSGPDAPRVPGGDIFGQILRDVLGGAVGGPAQMPQGRLGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKGHVDNIESVFDRFFGAQRHE
Ga0062593_1000197436	3300004114	Soil	FGGAVGGGGPARMPQGGQRPSPQMKDLSDLTRQLGVMGGAGAAMFGDHLEPGGDVEKAHVQNLQNVFEQFAGGDHVDLLAGLKE*
Ga0066388_1000258276	3300005332	Tropical Forest Soil	LGQILRDVLGGAVGGPTQMPQGRQAQSPQVKDLSDLSRQLGVMGGAGAAVFGDHFEAGRDVNQNHIDNIQGVFDRFFGAQRR*
Ga0066388_1029077373	3300005332	Tropical Forest Soil	MPSGPEGQMPGGDIFGQILRDVLGGAVGGPTQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHLDNIQSVFDRFFGAQQR*
Ga0066388_1047296371	3300005332	Tropical Forest Soil	MPGGDIFGQILRDVLGGAVGGPTQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHVDSIQSVFDRFFGAQRRE*
Ga0066388_1084007092	3300005332	Tropical Forest Soil	PGDIFGQILRDVLGGAVGGPAQMPQGPQGQSPQMKDLSDLSRQLGVICGAGAAVFGDHFKPGREVEKKHLDNIQNVFDRFFGAETR*
Ga0070698_1003950461	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPSGPDVTGAPGDIFGQILRDILGGAVGGPAQIPQGRQGQSPQMKDLSDLSKQLGVMGGAGAAVFGDHFEAGQDVEQKHIDNIQNVFDRFFGAQGR*
Ga0070699_1003396853	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPSSPDVPRAPGGDILGQILRDVFGGAVGGPAQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFEAGRDVEKEHIDNIQSVFDRFFGAQRRE*
Ga0068856_1007298771	3300005614	Corn Rhizosphere	ARQMPGGDIFGQVLRDIFGGAVGGGDPARMPQGGQRSSPQMKDLSDLTKQLGVMGGAGAAMFGDHLEPGGDVEKAHIQNLQNVFEQFAAGRSR*
Ga0066903_1021195342	3300005764	Tropical Forest Soil	PLPGGQRRPMPSDPDAPQMPGGDIFGQVLRDIFGGAAGGPSGMPQGGGRQSPQMKDLSDLTRQLGVMGGAGAAVFGDNFEVGRDVEKGHLERFQTVFDQFQAGRSR*
Ga0066903_1022936932	3300005764	Tropical Forest Soil	MPGGDIFGQILRDILGGAAGGPAQMPQGRPGGSPQLKDLSDLSRQLGVMGGAGAAVFGDHFEAGHDVDQSHVDNIQNVFDSFFGRQKL*
Ga0066903_1045014541	3300005764	Tropical Forest Soil	APGDIFGQILRDVLGGAVGSPAQMPQGPQGQSPQMKDLSDLSRQLSVMGGAGAAVFGEHFEPGRNVEKEHLDNIQSVFDRFFGSQRR*
Ga0066903_1046324171	3300005764	Tropical Forest Soil	GPVQIPMPGGQKGPMPSGPEGQMPGGDIFGQILRDVLGGAVAGPTQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRAVEKEHLDSIQSVFDRFFGAQQR*
Ga0068860_1027097601	3300005843	Switchgrass Rhizosphere	VLRDIFGGAVGGGDPARMPQGGQRSSPQMKDLSDLTKQLGVMGGAGAAMFGDHLEPGGDVEKAHIQNLQNVFEQFAAGRSR*
Ga0081540_10646621	3300005983	Tabebuia Heterophylla Rhizosphere	PSSPDAPRAPGDIFGQILRDVLGGAAGGPAQMPQGRQGQSPQTKDLSDLSRQLGVMGGAGTAVFGDHFETGRDVEKEHLDNIQTVFDRFFGAQQRE*
Ga0075021_103764242	3300006354	Watersheds	MPSGPDAPQMPGGDIFGQILRDLLGGAVAGGGVQMPQGRQGPSPEIKDLSDLSRKLGLMGGAGAALFGDQLEHGQDVEQSHLDNIQSVLDRFLGAQRR*
Ga0074062_105725071	3300006606	Soil	LGGAVGGPAQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKGHVDNIESVFDRFFGAQRRE*
Ga0075431_1017830632	3300006847	Populus Rhizosphere	GDIFGQILRDILGGAVGGPAQMPQGRQGQSPRTKDLSDLSKQLGVMGGAGAAVFGDHFEAGQDVEQKHIDNIQNVFDRFFGAQRR*
Ga0075434_1011434412	3300006871	Populus Rhizosphere	MQIPGGQQRPMPSDSDARQMPGGDIFGQVLRDIFGGAVGGGDPARMPQGGQRSSPQMKDLSDLTKQLGVMGGAGAAMFGDHLEPGGDVEKAHVQNLQNVFEQFAGGRSR*
Ga0126374_103223383	3300009792	Tropical Forest Soil	VLGGAVGGPAQMPQGRQGQSPHTKDLSDLSKQLGVTGGAGAAVFGDHFETGRDVEKGHVDNIESVFDRFFGAQRRE*
Ga0126384_105681282	3300010046	Tropical Forest Soil	GQILRDVLGGAVSGPTQMPQGRQGQSPQMKDLSDLSRQLGVMGGAGAAVFGDHFEPGREVEKNHLDNIQNVFDRFFGAETR*
Ga0126384_112865132	3300010046	Tropical Forest Soil	GGDIFGQILRDIFGGAVGGPGQMPQGQRGQSPDLKDLSDMTKKLGVMGGAGAAVFGDHFEVGRDVDKSHAANIKSVFDRFMGAQRR*
Ga0126382_116729701	3300010047	Tropical Forest Soil	MPGGDILGQILRDMLGGAGGAAPVPPRSGPSPQMKDLSDLSKQLGVMGGAGAAVFGDRFEVGREVEQDHLDNIQGVFANFLGARRR*
Ga0126373_118689931	3300010048	Tropical Forest Soil	PEGQMPGGDIFGQILRDVLGGAVAGPTQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRAVEKEHLDSIQSVFDRFFGAQQR*
Ga0126376_105019522	3300010359	Tropical Forest Soil	VPGGDIFGQILRDVLGGAVGGPAQTPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKGHVDNIESVFDRFFGAQRRE*
Ga0126378_112970122	3300010361	Tropical Forest Soil	IPSGTDAPRAPGDIFGQILRDVLGGAVSGPTQMPQGRQGQSPQMKDLSDLSRQLGVMGGAGAAVFGDHFEPGREVEKKHLDNIQNVFDRFFGAETR*
Ga0126378_117541671	3300010361	Tropical Forest Soil	GPMPSGPEGQMPGGDIFGQILRDVLGGAVGGPTQMPQGQQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHLDNIQSVFDRFFGAQQRR*
Ga0126381_1010123873	3300010376	Tropical Forest Soil	GPNAPQAPGDIFGQILRDVLGGALGGPAQMPQGRQAQSRHTKDLSDVSKQLGVMGGAGAAVFGDHFETGRDVEKGHVDNIESVFDRFFGAQRRE*
Ga0126381_1023223061	3300010376	Tropical Forest Soil	QIPMPGGQKGPMPSGPEGQMPGGDTFGQILRDVLGGAVGGPTQMPQGQQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHLDNIQSVFDRFFGAQQRR*
Ga0126383_107506232	3300010398	Tropical Forest Soil	MPSGTDAPRAPGDIFGQILRDVLGGAVGGPTQMPQGRQGQSPQMKDLSDLSRQLGVMGGAGAAVFGDHFEPGREVEKNHLDNIQNVFDRFFGAETR*
Ga0126383_115319671	3300010398	Tropical Forest Soil	SGSDAPQMPGGDIFGQILRDILGGAAGGPAQMPQGRQGQPPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVERGHVDNIESVFDRFFGAQRRE*
Ga0126383_136225681	3300010398	Tropical Forest Soil	QSPMPSGTDAPRVPGGDIFGQILRDIFGGAVGGPAQMPQGRKGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDNIQSVFDRFFGAQRRE*
Ga0134121_101637254	3300010401	Terrestrial Soil	MPGGDIFGQVLRDIFGGAVGGGDPARMPQGGQRSSPQMKDLSDLTKQLGVMGGAGAAMFGDHLEPGGDVEKAHIQNLQNVFEQFAAGRSR*
Ga0137363_110596472	3300012202	Vadose Zone Soil	SSPDVPRAPGGDILGQILRDIFGGAVGGPAQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHVDNIQSVFDRFFGAQRRE*
Ga0137360_102777733	3300012361	Vadose Zone Soil	GDIFGQILRDVLGGAVGGPAQMPQGRGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKGHVDNIESVFDRFFGAQRRE*
Ga0126375_104063461	3300012948	Tropical Forest Soil	PGDIFGQILRDVLGGAVGGPAQMPQGRQGQSPHTKDLSDLSKQLGVTGGAGAAVFGDHFETGRDVEKGHVDNIESVFDRFFGAQRRE*
Ga0126375_104908691	3300012948	Tropical Forest Soil	MPGGQGGPVQIPMPGGQAGPVPQMPGGDILGQILRDMLGGAGGAAPAPRSGPSPQMKDLSDLSRQLGVMGGAGAAVFGDRFEVGRKVEQGHLDNIQSVFANFLGAQRR*
Ga0164303_112889102	3300012957	Soil	DVLGGLVGGSGQMPQGRQGQSPQMKELSDRSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDNIQSVFDRVFGAQRRE*
Ga0164299_104065273	3300012958	Soil	GDVFGQILRDILGGAVGGPAQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKGHVDNIESVFDRFFGAQRCE*
Ga0164299_105633011	3300012958	Soil	MPGGDIFGQILRDILGGAAGGPAQMPQGRQGQSPQLKDLSDLTKQLGAKGGAGAAVFGDHFEAGRDVEQSHVDSIQNVFDRLFGTQNR*
Ga0126369_107575972	3300012971	Tropical Forest Soil	MPGGDILGQILRDLLGGAGGAAPVPPRSGQSPQLKDLSDLSKQLGVMGGAGAAVFGDRFEVGRDVEQGHLDNIQGLFANFFGAQRR*
Ga0126369_135673731	3300012971	Tropical Forest Soil	MPGGDIFGQILRDVLGGAVGGSVQTPQGRQGPSPQMKDLSDLSKQLGVVGGAGAAVFGDHLEAGRDVDRSHVDNIQRVLDRFFGPQGA*
Ga0164309_101793553	3300012984	Soil	VPGGDIFGQILRDVLGGAVGGPAQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDNIQSVFDRFFGAQRPE*
Ga0075344_10956012	3300014296	Natural And Restored Wetlands	PQAPGGDILGQILRDLLGGGGPGRAPQPRGSGPSPQMKDLSDMSKQLGVMGGAGQAVFGERFEVGRDVEQEHLESIQSVFDRFFGEQRR*
Ga0075306_11053572	3300014297	Natural And Restored Wetlands	APMPRQAPAPTPQHMPQAPGGDILGQILRDLLGGGGPGRAPQQRGPSPQAPSPQMKDLSDLSKQLGFMGGAGQAVFGERFEVGRDVEQEHLQSIQSVFDRFFGPQQR*
Ga0132258_139750591	3300015371	Arabidopsis Rhizosphere	LRDMLGGAGGAAPVPPRSGPSPQIKDLSDLSRQLGVMGGAGAAVFGDRFEVGRKVEQGHLDNIQSVFANFLGAQRR*
Ga0132256_1019488611	3300015372	Arabidopsis Rhizosphere	MPSGDIFGQVLRDIFGGAVGGPPRMPQGGQRQSPQTKDLSDLTRQLGVMGGAGAAVFGDHFEVGRNVAQGHIDNIQNVFDQFRVDRPR*
Ga0132257_1009553351	3300015373	Arabidopsis Rhizosphere	QMPGGDVFGQILRDIFGGAVGGPTQMPQGRPGPAPELKDLSDRSKQLGAMGSAGAAVFGDHFEVGRDVDKSHADSLESVFNRFFGAQRR*
Ga0132257_1018428751	3300015373	Arabidopsis Rhizosphere	PAPQMPGGDILGQILRDLLGGAGGAAPVPPRSGQSPQLKDLSDLSKQLGVMGGAGAAVFGDRFEVGRDVEQGHLDNIQGLFANFFGAQRR*
Ga0132255_1008248431	3300015374	Arabidopsis Rhizosphere	QRPMPSDSDAPQMPGGDIFGQVLRDIFGGAVGGGGPARMPRGGQRPSPQMKDLSDLTRQLGVMGGAGAAMFGDHLEPGGDVEKAHVQNLQNVFEQFAGGRSR*
Ga0182036_101532462	3300016270	Soil	MPSGTDAPRAPGDIFGQILRDVLGGAVSGPTQTPQGRQGQSPQMKDLSDLTRQLGVMGGAGAAVFGDHFEPGREVEKKHLDNIQNVFDRFFGAETR
Ga0182041_112604082	3300016294	Soil	QGPSSPDAPQMPGGDIFGQILRDILGGAAGGPAQMPQGRPGGSPQLQALSDLSRHLGVMGGAGAAVFGDHFDAGQDVEQSHVDNIQNVFDSFFGRQKL
Ga0182041_114397921	3300016294	Soil	QVPGGDILGQILRDVLGGAIGSSGGLQMPQGRQAPSPPLKDLSDLSKQLNRMGGAGAALFGDRFEHGQDVEQDHLDNIQGVFDRFFGAPRR
Ga0182041_114819893	3300016294	Soil	QILRDVLGGAIGRSGPTAPRQQAPSPPMKDLSDLSKTLGVMGGAGAAVFGDHFEVGQDVDKGHVANIRSVFERFMSAQRR
Ga0182041_116716512	3300016294	Soil	MPGGQQGPIPSGPDAPPVPGGDIFGQILRDILGGGVGGPTQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDNIQSVFDRFFGAQRRE
Ga0182033_111155711	3300016319	Soil	GPMPSGPDAPRVPGGDIFGQILRDILGGAVGGPAQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDNIQSVFDRFFGAQRRE
Ga0182033_116570772	3300016319	Soil	GMQEGRINPQGGSVQMPLPGGQRRSSDPESPQMPGGDIFGQILRDVFGGAAGGPSGMPQGGGRQSPQMKDLSDLTRQMGGAGAAVFGDQFEVGRDVEKSQLERFRTVFDQFQAGRSR
Ga0182033_120524621	3300016319	Soil	SPGGQQMPGGDIFGQILRDVLGGALGRSGPAAPRQQTPSPQMKDLSDLSKTLGVMGGAGAAVFGDHFEVGQDVDKSHVANIQNVFERFMSAQRR
Ga0182035_119894002	3300016341	Soil	MPGGDIFGQILRDVFGGAVGGPARMPQGQSPELKDLSDLSKKLGVMGGAGAAVFGDHLEVGRDVDKSHLDNLQSVFRQFTGAQRR
Ga0182032_100154023	3300016357	Soil	MPSGTDAPRAPGDIFGQILRDVLGGAVSGPTQMPQGRQGQSPQMKDLSDLTRQLGVMGGAGAAVFGDHFEIGREVEKKHLDNIQNVFDRFFGVQGR
Ga0182034_100221793	3300016371	Soil	MPSGPDAPQIPGGDIFGQILRDILGGGVGGPGQMPQGQQGQSPQTKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDNIQSVFDRFFGAQRR
Ga0182034_105224983	3300016371	Soil	SPDAPQMPGGDIFGQILRDILGGAAGGPAQMPQGRPGGSPQLKDLSDLSRQLGVMGGAGAAVFGDHFDAGQDVEQSHVDNIQNVFDSFFGRQKL
Ga0182040_102694482	3300016387	Soil	MPSGPAAPQVPGGDILGQILRDVLGGLAGGQAQTSPGQQGPSPPMKDLSDRSKHLGLMGGVGAAVFGDHFEAGRDVDQSHVDSIQRVLDRYFGAQQC
Ga0182037_114382121	3300016404	Soil	ILRDILGGAAGGPAQMPQGRPGGSPQLKDLSDLTRQLGVMGGAGAAVFGDHFEAGQDVEQSHVDNIQNVFDRFFGTQKR
Ga0182037_117021291	3300016404	Soil	PGGDIFGQILRDILGGGVGGPAQMPQGRQGQSPQTKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDNIQGVFERFFGAQRR
Ga0182039_100928653	3300016422	Soil	DILGQILRDVLGGAFGGGSVQMPQGRQSPQMKDLSDRTKQLGLMEGVGQAVFGEQIEHGQDVEQGHLDNIQSVFDHFVTRR
Ga0182039_117491951	3300016422	Soil	RPAPSDSEAPQMPGGDIFGQVLRDIFGGAVGRPSQMPQGPQGGSPQMKDLSDRTKQLGLMGGAGTAVFGDHFEVGRDVEQRHVDDLQRVFERFFSAGAR
Ga0182038_101896261	3300016445	Soil	MPGGDIFGQILRDILGGAAGGPAQMPQGRPGGSPQLKDLSDLSRQLGVMGGAGAAVFGDHFEAGQDVEQSHVDNIQNVFDSFFGRQKR
Ga0182038_105381592	3300016445	Soil	QILRDVFGGAVGGPARMPQGQSPELKDLSDLSKKLGVMGGAGAAVFGDHLEVGRDVDKSHLDNLQSVFGQFTGAQRR
Ga0182038_107639503	3300016445	Soil	LRDILGGGVGGPTQMPQGRQGQSPQTKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDNIQSVFDRFFGAQRR
Ga0163161_113772141	3300017792	Switchgrass Rhizosphere	GQQRPMPSDSDARQMPGGDIFGQVLRDIFGGAVGGGDPARMPQGGQRSSPQMKDLSDLTKQLGVMGGAGAAMFGDHLEPGGDVEKAHIQNLQNVFEQFAAGRSR
Ga0187783_100922622	3300017970	Tropical Peatland	MPSGSDAPQMPGGDIFGQILRDILGGAGGGPTQVPQGQPGQSPQLKDLSDLSRQLGGGAGAAVFGDHFETGQDIDQRHIDNIQSVFDRFFGAQRS
Ga0126371_104097131	3300021560	Tropical Forest Soil	RDMLGGAVGGPAQMPQGRQGQSPQTKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVETEHLDNIQSVFDRFFGAQRR
Ga0209648_104338141	3300026551	Grasslands Soil	GGQKGPMPSTPDVPRAPGGDILGQILRDVFGGAVGGPAQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFEAGRDVEKEHIDNIQSVFDRFFGAQRRE
Ga0207775_1200001	3300026817	Tropical Forest Soil	APQMPGGDIFGQILRDVFGGAVGGPARMPQGQSPELKDLSDLSKKLGVMGGAGAAVFGDHLEVGRDVDKSHLDKLQSLFGQFTGAQRR
Ga0207826_11661541	3300027680	Tropical Forest Soil	FGQILRDVLGGLVGGGGPGQMPQGRQAPSPPMKDLSDLSKQLNRMGGAGAALFGDQFEHGRNVEQSHLDNIQSLFDRYLGAQGR
Ga0318541_101580212	3300031545	Soil	MPSQPDAPQMPGQVPGGDIFGQILRDVFGGAIGSGGQLQMPQGRQASPPAKDLSDLSKQLGLMGGAGAALFGGRLDHGQDVDRSHLDNIQSVFDRFFTAQQ
Ga0318515_101275781	3300031572	Soil	PQMPGQVPGQVPGGDIFGQILRDVLGGAIGGGGGVQMPQGRQAPSPPMKDLSDLSKQLNRMGGAGAALFGDQFEHGQDVEQDHLDNIQGVFDRFFGAPRR
Ga0310915_111180542	3300031573	Soil	IPGGQQGPMPSGPDAPQIPGGDIFGQILRDILGGGVGGPAQMPQGRQGQSPQTKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDNIQGVFERFFGAQRR
Ga0318560_100592494	3300031682	Soil	MPGGDIFGQILRDVLGGAVGGPTQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHLDNIQSVFDRFFGAQQR
Ga0318501_107861371	3300031736	Soil	PQIPGGDIFGQILRDILGGGVGGPAQMPQGRQGQSPQTKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDNIQGVFERFFGAQRR
Ga0306918_110892862	3300031744	Soil	QQIPGGDIFGQILRDVLGGAMGRSGPTPQRQQAPSPPMKDLSDLSKTLGVMGGAGAAVFGDHFEVGQDVDKGHVANIRSVFERFMSAQRR
Ga0306918_111636461	3300031744	Soil	GQILRDVLGGAVGGPAQMPQGRQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDNIESVFDRFFGARRHE
Ga0318521_103113052	3300031770	Soil	PMPSQPDAPQMPGQVPGGDIFGQILRDVFGGAIGSGGQLQMPQGRQASPPAKDLSDLSKQLGLMGGAGAALFGGRLDHGQDVDRSHLDNIQSVFDRFFTAQQ
Ga0318521_109018991	3300031770	Soil	PRVPGGDIFGQILRDILGGGVGGPAQMPQGRQGQSPQTKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDNIESVFDRFFGARRHE
Ga0318521_110412651	3300031770	Soil	PVQIPIPGGQQGPVPSGPDAPRVPGGDIFGQILRDVLGGAVGGPAQMPQGRQGQSPQTKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKGHVDNIESVFDRFFGAQRRE
Ga0318547_107938121	3300031781	Soil	PVQIPMPGGQKGPMPSGPEGQMPGGDIFGQILRDVLGGAVGGPTQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHLDNIQSVFDRFFGAQQR
Ga0318497_108328091	3300031805	Soil	SGPDAPQMPNQVPGGDILGQILRDVLGGAIGGGGGVQMPQQRQAPSPPMKDLSDLSKQLNRMGGAGAALFGDQFEHGQDVEQDHLDNIQGVFDRFFGAPRR
Ga0318567_100759951	3300031821	Soil	SGPGAPQVPGGDILGQILRDVLGGLVGGQAQTSPGQQRPSPPMKDLSDRSKHLGLMGGVGAAVFGDHFEAGRDVDQSHVDSIQRVLDRYFGAQQR
Ga0310917_108908951	3300031833	Soil	GGPVQIPMPGGQQGPTPSAPEAPQMPGGDIFGQILRDVFGGAVGGPARMPQGQSPELKDLSDLSKKLGVMGGAGAAVFGDHLEVGRDVDKSHLDNLQSVFGQFTGAQRR
Ga0306919_108682942	3300031879	Soil	MPSGPDAPQIPGGDIFGQILRDILGGGVGGPGQMPQGQQGQSPQTKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDN
Ga0306925_104529774	3300031890	Soil	GQILRDILGGGVGGPGQMPQGQQGQSPQTKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDNIQSVFDRFFDAQRR
Ga0306925_104821523	3300031890	Soil	GTDAPRAPGDIFGQILRDVLGGAVSGPTQMPQGRQGQSPQMKDLSDLSRQLGVMGGAGAAVFGDHFEPGREVEKKHLDNIQNVFDRFFGVQGR
Ga0306925_108460821	3300031890	Soil	GPGNPQVPGGDILGQILRDVLGGAFGGGSVQMPQGRQSPQMKDLSDRTKQLGLMEGVGQAVFGEQIEHGQDVEQGHLDNIQSVFDHFVTRR
Ga0318536_101316323	3300031893	Soil	ILRDVLGGAIGGGGGVQMPQGRQAPSPPMKDLSDLSKQLNRMGGAGAALFGDQFEHGQDVEQDHLDNIQGVFDRFFGAPRR
Ga0318520_107938242	3300031897	Soil	VQMPLPGGQRRPMPPDPESPQMPGGDIFGQILRDVFGGAAGGPSGMPQGGGRQSPQMKDLSDLTKQLGVMGGAGAAVFGDHFEVGRDVEKSHLESIQTVLDQFQAGRPR
Ga0306923_100377183	3300031910	Soil	MPSGTDAPRAPGDIFGQILRDVLGGAVSGPTQTPQGRQGQSPQMKDLSDLTRQLGVMGGAGAAVFGDHFEPGREVEKKHLDNIQNVFDRFFGVQGR
Ga0306923_102018761	3300031910	Soil	DAPRVPGGDIFGQILRDILGGGVGGPAQMPQGRQGQSPQTKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDNIQGVFERFFGAQRR
Ga0306923_118191242	3300031910	Soil	RPMPSDPESPQMPGGDIFGQILRDVFGGAAGGPSGMPQGGGRQSPQMKDLSDLTKQLGVMGGAGAAVFGDHFEVGRDVEKSHLESIQTVLDQFQAGRPR
Ga0306923_120441621	3300031910	Soil	PGDIFGQILRDVLGGAVSGPTQMPQGRQGQSPQMKDLSDLSRQLGVMGGAGAAVFGDHFEPGREVEKKHLDNIQNVFDRFFGAETR
Ga0306921_101921271	3300031912	Soil	PGGQQSPMPSGTDAPRAPGDIFGQILRDVLGGAVSGPTQTPQGRQGQSPQMKDLSDLTRQLGVMGGAGAAVFGDHFEIGREVEKKHLDNIQNVFDRFFGVQGR
Ga0306921_115437221	3300031912	Soil	DAPQIPGGDIFGQILRDILGGGVGGPGQMPQGQQGQSPQTKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDNIQSVFDRFFDAQRR
Ga0306921_124491542	3300031912	Soil	QILRDMLGGAGGPARGPQQSGQSPQMKDLSNLTKQLGVMDHAGSAVFGDRLEVGRDVEQNQLDNIQDVFDRFFGAQRR
Ga0310912_104287871	3300031941	Soil	MPGGDIFGQILRDVLGGAIGRSGPTAPRQQAPSPPMKDLSDLSKTLGVMGGAGAAVFGDHFEVGQDVDKSHVANIQSVFERFLSAQRR
Ga0310912_112521302	3300031941	Soil	QIPMPGGQKGPMPSGPEGQMPGGDIFGQILRDVLGGAVGGPTQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHLDNIQSVFDRFFGAQQR
Ga0310916_100785141	3300031942	Soil	IPGGDIFGQILRDILGGGVGGPAQMPQGRQGQSPQTKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDNIQGVFERFFGAQRR
Ga0310913_102625012	3300031945	Soil	MPSGPDAPQIPGGDIFGQILRDILGGGVGGPAQMPQGRQGQSPQTKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDNIQSVFDRFFGAQRR
Ga0310910_112519681	3300031946	Soil	QQMPGGDIFGQILRDVLGGALGRSGPAAPRQQTPSPQMKDLSDLSKTLGVMGGAGAAVFGDHFEVGQDVDKSHVANIQNVFERFMSAQRR
Ga0310909_107092871	3300031947	Soil	PGGQQGPMPSGPDAPQIPGGDIFGQILRDILGGGVGGPAQMPQGRQGQSPQTKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDNIQGVFERFFGAQRR
Ga0306926_102270255	3300031954	Soil	DIFGQILRDVLGGAVGGPAQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKGHVDKIESVFDRFFGAQRRE
Ga0306926_107133371	3300031954	Soil	VIIGGGPVQIPMPGGQQSPMPSGTDAPRAPGDIFGQILRDVLGGAVSGPTQTPQGRQGQSPQMKDLSDLTRQLGVMGGAGAAVFGDHFEPGREVEKK
Ga0306926_119504992	3300031954	Soil	PGGDVLGQILRDIFGGALGGPGQMPQGRQGSSPELKDLSDRTKQISLMGGAGAAVFGDQFEHGQDVDQSHLDNIQSILDRFLGVQRR
Ga0318530_100692771	3300031959	Soil	DAPQMPGQVPGQVPGGDIFGQILRDVLGGAIGGGGGVQMPQGRQAPSPPMKDLSDLSKQLNRMGGAGAALFGDQFEHGQDVEQDHLDNIQGVFDRFFGAPRR
Ga0318531_101008943	3300031981	Soil	DIFGQILRDVLGGAVGGPTQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHLDNIQSVFDRFFGAQQR
Ga0318549_101230541	3300032041	Soil	VQIPMPGGQKGPMPSGPEGQMPGGDIFGQILRDVLGGAVGGPTQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHLDNIQSVFDRFFGAQQR
Ga0318558_105970392	3300032044	Soil	GGPVQIPLPSGQEDQTPSSPSGQEIPGGDIFGQILRDVLGGAMNRSGSAPSREQIPSPPMKDLSDLTKKLGVMGGAGAAVFGDHFEVGQDVDKGHVANIQGVFERFMSAQRR
Ga0318506_102653151	3300032052	Soil	MPSGPDAPRVPGGDIFGQILRDILGGAVGGPGQMPQGRQGQSPQTKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVETEHLDNIQSVFDRFLGAQRR
Ga0318570_103146142	3300032054	Soil	MPSGPDAPQMPNQVPGGDILGQILRDVLGGAIGGGGGVQMPQQRQAPSPPMKDLSDLSKQLNRMGGAGAALFGDQFEHGQDVEQDHLDNIQGVFDRFFGAPRR
Ga0318533_102533523	3300032059	Soil	PMPGGQQSPMPSGTDAPRAPGDIFGQILRDVLGGAVSGPTQMPQGRQGQSPQMKDLSDLTRQLGVMGGAGAAVFGNHFEPGREVEKKHLDNIQNVFDRFFGVQGR
Ga0318533_103561572	3300032059	Soil	PQAPQMPGGDIFGQFLRDVFGGAAGGPSGMPQGGGRQSPQMKDLSDLTRQMGGAGAAVFGDQFEVGRDVEKSQLERFRTVFDQFQAGRSR
Ga0318553_101536881	3300032068	Soil	PSGPDAPQMPGQVPGQVPGGDIFGQILRDVLGGAIGGGGGVQMPQGRQAPSPPMKDLSDLSKQLNRMGGAGAALFGDQFEHGQDVEQDHLDNIQGVFDRFFGAPRR
Ga0306924_110887442	3300032076	Soil	PVQIPMPGQQRPAPSDSEAPQMPGGDIFGQVLRDIFGGAVGRPSPMPQGPQGGSPQMKDLSDRTKQLGVMGGAGAAVFGDHFEVGQDVEQRHVDDLQRVFARFFDAGSR
Ga0306924_123471791	3300032076	Soil	SGPDAPGVPGGDIFGQILRDVLGGAVGGPAQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKGHVDNIESVFDRFFGAQRRE
Ga0307472_1008399633	3300032205	Hardwood Forest Soil	GDIFGQILRDVLGGALGGPAQMPQGRQAPSPQIKDLSDLSKQLGVMGGAGAAVFGEHFEPGRDAGQKHLDNIQNVFDRFFGAEGR
Ga0306920_1017944153	3300032261	Soil	MPGGDIFGQILRDVLGGAVGGPTQMPQGRQGQSPQIKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHLHNIQAVFDRFFGARRE
Ga0306920_1019350111	3300032261	Soil	MPSGPDAPQIPGGDIFGQILRDILGGGVGGPGQMPQGQQGQSPQTKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDNIQSVFDRFFDAQRR
Ga0310914_102083021	3300033289	Soil	QGPMPSGPDAPQIPGGDIFGQILRDILGGGVGGPAQMPQGRQGQSPQTKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVEKEHIDNIQGVFERFFGAQRR
Ga0310914_115239002	3300033289	Soil	RDVLGGAMGRSGPTPQRQQAPSPPMKDLSDLSKTLGVMGGAGAAVFGDHFEVGQDVDKGHVANIRSVFERFMSAQRR
Ga0318519_110238202	3300033290	Soil	QILRDILGGAVGGPGQMPQGRQGQSPQTKDLSDLSKQLGVMGGAGAAVFGDHFETGRDVETEHLDNIQSVFDRFLGAQRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063748

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences