Metagenome Family F063730

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063730
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	79 residues
Representative Sequence	MKGMWDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDEEIEIENSRIPAAVYELE
Number of Associated Samples	71
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	59.69 %
% of genes near scaffold ends (potentially truncated)	48.84 %
% of genes from short scaffolds (< 2000 bps)	100.00 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (94.574 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere (81.395 % of family members)
Environment Ontology (ENVO)	Unclassified (83.721 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (82.171 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.56% β-sheet: 0.00% Coil/Unstructured: 79.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF03732	Retrotrans_gag	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
All Organisms	root	All Organisms	5.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Viruses	superkingdom	All Organisms → Viruses	3.10 %
cellular organisms	root	All Organisms → cellular organisms	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
Andropogonodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
Andropogoneae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
Sorghinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
Sorghum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	94.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.10 %
Sorghum bicolor	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	2.33 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005290\|Ga0065712_10673765	Not Available	557	Open in IMG/M
3300005459\|Ga0068867_102129330	Not Available	531	Open in IMG/M
3300005718\|Ga0068866_10502412	Not Available	802	Open in IMG/M
3300005718\|Ga0068866_11459851	Not Available	502	Open in IMG/M
3300005840\|Ga0068870_11078225	Not Available	576	Open in IMG/M
3300005840\|Ga0068870_11174853	Not Available	555	Open in IMG/M
3300006358\|Ga0068871_102111836	Not Available	536	Open in IMG/M
3300009036\|Ga0105244_10212052	Not Available	911	Open in IMG/M
3300009148\|Ga0105243_11253295	Not Available	757	Open in IMG/M
3300009148\|Ga0105243_11750681	Not Available	651	Open in IMG/M
3300009176\|Ga0105242_11697936	Not Available	668	Open in IMG/M
3300013296\|Ga0157374_11503400	Not Available	697	Open in IMG/M
3300013297\|Ga0157378_12026407	Not Available	626	Open in IMG/M
3300014745\|Ga0157377_11348240	Not Available	560	Open in IMG/M
3300014969\|Ga0157376_10826305	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	941	Open in IMG/M
3300014969\|Ga0157376_11775480	Not Available	653	Open in IMG/M
3300014969\|Ga0157376_12587341	Not Available	547	Open in IMG/M
3300015267\|Ga0182122_1023089	Not Available	689	Open in IMG/M
3300015269\|Ga0182113_1016614	Not Available	841	Open in IMG/M
3300015274\|Ga0182188_1043943	Not Available	553	Open in IMG/M
3300015276\|Ga0182170_1057789	Not Available	549	Open in IMG/M
3300015276\|Ga0182170_1065749	Not Available	528	Open in IMG/M
3300015276\|Ga0182170_1078181	Not Available	500	Open in IMG/M
3300015277\|Ga0182128_1006915	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	982	Open in IMG/M
3300015277\|Ga0182128_1020393	Not Available	737	Open in IMG/M
3300015281\|Ga0182160_1071623	Not Available	527	Open in IMG/M
3300015282\|Ga0182124_1066979	Not Available	535	Open in IMG/M
3300015283\|Ga0182156_1086618	Not Available	504	Open in IMG/M
3300015285\|Ga0182186_1039735	Not Available	624	Open in IMG/M
3300015286\|Ga0182176_1050924	Not Available	593	Open in IMG/M
3300015287\|Ga0182171_1006426	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	1039	Open in IMG/M
3300015287\|Ga0182171_1029206	Not Available	692	Open in IMG/M
3300015287\|Ga0182171_1042194	Not Available	625	Open in IMG/M
3300015287\|Ga0182171_1066072	Not Available	549	Open in IMG/M
3300015289\|Ga0182138_1027772	Not Available	703	Open in IMG/M
3300015289\|Ga0182138_1052575	Not Available	588	Open in IMG/M
3300015291\|Ga0182125_1086155	Not Available	517	Open in IMG/M
3300015296\|Ga0182157_1027110	Not Available	744	Open in IMG/M
3300015298\|Ga0182106_1080751	Not Available	542	Open in IMG/M
3300015299\|Ga0182107_1035919	Not Available	693	Open in IMG/M
3300015300\|Ga0182108_1069089	Not Available	576	Open in IMG/M
3300015300\|Ga0182108_1092558	Not Available	526	Open in IMG/M
3300015302\|Ga0182143_1014376	Not Available	891	Open in IMG/M
3300015302\|Ga0182143_1080980	Not Available	544	Open in IMG/M
3300015302\|Ga0182143_1102749	Not Available	505	Open in IMG/M
3300015307\|Ga0182144_1078453	Not Available	557	Open in IMG/M
3300015307\|Ga0182144_1096109	Not Available	522	Open in IMG/M
3300015308\|Ga0182142_1079902	Not Available	564	Open in IMG/M
3300015308\|Ga0182142_1085646	Not Available	552	Open in IMG/M
3300015314\|Ga0182140_1071377	Not Available	586	Open in IMG/M
3300015321\|Ga0182127_1030851	Not Available	771	Open in IMG/M
3300015321\|Ga0182127_1097936	Not Available	544	Open in IMG/M
3300015321\|Ga0182127_1099008	Not Available	542	Open in IMG/M
3300015321\|Ga0182127_1121773	Not Available	506	Open in IMG/M
3300015341\|Ga0182187_1090572	Not Available	668	Open in IMG/M
3300015341\|Ga0182187_1150168	Not Available	559	Open in IMG/M
3300015341\|Ga0182187_1162690	Not Available	543	Open in IMG/M
3300015342\|Ga0182109_1092688	Not Available	699	Open in IMG/M
3300015342\|Ga0182109_1189777	Not Available	535	Open in IMG/M
3300015342\|Ga0182109_1221769	Not Available	503	Open in IMG/M
3300015343\|Ga0182155_1196027	Not Available	529	Open in IMG/M
3300015343\|Ga0182155_1206240	Not Available	519	Open in IMG/M
3300015343\|Ga0182155_1226193	Not Available	501	Open in IMG/M
3300015344\|Ga0182189_1177185	Not Available	555	Open in IMG/M
3300015345\|Ga0182111_1065291	Not Available	826	Open in IMG/M
3300015345\|Ga0182111_1205046	Not Available	539	Open in IMG/M
3300015345\|Ga0182111_1209040	Not Available	535	Open in IMG/M
3300015346\|Ga0182139_1075359	Not Available	786	Open in IMG/M
3300015347\|Ga0182177_1198314	Not Available	549	Open in IMG/M
3300015347\|Ga0182177_1239368	Not Available	510	Open in IMG/M
3300015351\|Ga0182161_1147680	Not Available	638	Open in IMG/M
3300015351\|Ga0182161_1182387	Not Available	587	Open in IMG/M
3300015351\|Ga0182161_1187177	Not Available	581	Open in IMG/M
3300015351\|Ga0182161_1214224	Not Available	550	Open in IMG/M
3300015351\|Ga0182161_1235248	Not Available	529	Open in IMG/M
3300015355\|Ga0182159_1264882	Not Available	569	Open in IMG/M
3300015355\|Ga0182159_1282803	Not Available	553	Open in IMG/M
3300015361\|Ga0182145_1092364	Not Available	646	Open in IMG/M
3300015361\|Ga0182145_1107849	Not Available	613	Open in IMG/M
3300015361\|Ga0182145_1156735	Not Available	541	Open in IMG/M
3300017404\|Ga0182203_1067488	Not Available	671	Open in IMG/M
3300017407\|Ga0182220_1079009	Not Available	551	Open in IMG/M
3300017407\|Ga0182220_1091456	Not Available	528	Open in IMG/M
3300017409\|Ga0182204_1029568	Not Available	764	Open in IMG/M
3300017409\|Ga0182204_1075453	Not Available	580	Open in IMG/M
3300017409\|Ga0182204_1079932	Not Available	570	Open in IMG/M
3300017409\|Ga0182204_1096488	Not Available	538	Open in IMG/M
3300017409\|Ga0182204_1108528	Not Available	518	Open in IMG/M
3300017410\|Ga0182207_1128074	Not Available	561	Open in IMG/M
3300017411\|Ga0182208_1086373	Not Available	572	Open in IMG/M
3300017415\|Ga0182202_1117040	Not Available	532	Open in IMG/M
3300017415\|Ga0182202_1128124	Not Available	516	Open in IMG/M
3300017417\|Ga0182230_1034205	Not Available	888	Open in IMG/M
3300017417\|Ga0182230_1102480	Not Available	530	Open in IMG/M
3300017420\|Ga0182228_1015534	All Organisms → Viruses → Predicted Viral	1152	Open in IMG/M
3300017420\|Ga0182228_1032051	Not Available	853	Open in IMG/M
3300017420\|Ga0182228_1125316	Not Available	508	Open in IMG/M
3300017424\|Ga0182219_1031643	Not Available	799	Open in IMG/M
3300017424\|Ga0182219_1067543	Not Available	631	Open in IMG/M
3300017425\|Ga0182224_1032002	Not Available	838	Open in IMG/M
3300017425\|Ga0182224_1073927	Not Available	651	Open in IMG/M
3300017425\|Ga0182224_1095641	Not Available	601	Open in IMG/M
3300017430\|Ga0182192_1165389	Not Available	510	Open in IMG/M
3300017438\|Ga0182191_1105448	Not Available	606	Open in IMG/M
3300017438\|Ga0182191_1118535	Not Available	583	Open in IMG/M
3300017442\|Ga0182221_1055099	Not Available	713	Open in IMG/M
3300017442\|Ga0182221_1148681	Not Available	525	Open in IMG/M
3300017442\|Ga0182221_1168656	Not Available	504	Open in IMG/M
3300017443\|Ga0182193_1144360	Not Available	561	Open in IMG/M
3300017680\|Ga0182233_1040957	Not Available	815	Open in IMG/M
3300017680\|Ga0182233_1055215	Not Available	703	Open in IMG/M
3300017680\|Ga0182233_1071091	Not Available	625	Open in IMG/M
3300017681\|Ga0182226_1080661	Not Available	604	Open in IMG/M
3300017682\|Ga0182229_1050256	Not Available	707	Open in IMG/M
3300017682\|Ga0182229_1068975	Not Available	607	Open in IMG/M
3300017682\|Ga0182229_1088619	Not Available	542	Open in IMG/M
3300017683\|Ga0182218_1096104	Not Available	582	Open in IMG/M
3300017684\|Ga0182225_1054576	Not Available	679	Open in IMG/M
3300017684\|Ga0182225_1114198	Not Available	541	Open in IMG/M
3300017684\|Ga0182225_1126992	Not Available	524	Open in IMG/M
3300017685\|Ga0182227_1054887	Not Available	714	Open in IMG/M
3300017685\|Ga0182227_1061868	Not Available	680	Open in IMG/M
3300021060\|Ga0182232_1082516	Not Available	522	Open in IMG/M
3300025901\|Ga0207688_10243271	All Organisms → Viruses → Predicted Viral	1088	Open in IMG/M
3300025927\|Ga0207687_11565145	Not Available	566	Open in IMG/M
3300025934\|Ga0207686_11621233	Not Available	534	Open in IMG/M
3300025935\|Ga0207709_10301783	All Organisms → Viruses → Predicted Viral	1191	Open in IMG/M
3300025937\|Ga0207669_10394159	All Organisms → Viruses → Predicted Viral	1083	Open in IMG/M
3300026078\|Ga0207702_11128080	Not Available	778	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	82.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.20%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	82.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	82.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Miscanthus Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere	81.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015267	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015269	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015274	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015276	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015277	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015281	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015282	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015283	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015285	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015286	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015287	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015289	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015291	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015296	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015298	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015299	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015300	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015302	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015307	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015308	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015314	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015321	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015341	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015342	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015343	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015344	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015345	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015346	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015347	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015351	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015355	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015361	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300017404	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017407	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017409	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017410	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017411	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017415	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017417	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017420	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017424	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017425	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017430	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017438	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017442	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017443	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017680	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017681	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017682	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017683	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017684	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017685	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300021060	Phyllosphere microbial comminities from miscanthus, Michigan, USA - G6R3_NF_07NOV2016_LD2 MG	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0065712_106737651	3300005290	Miscanthus Rhizosphere	RSKTRPRMEEFELAPTCLNLDACSTLPGAKPTEELAEALKYVSRLHKSNEEIEIENSRIPAAVYELE*
Ga0068867_1021293301	3300005459	Miscanthus Rhizosphere	RLREMKGMWDQLPKEIRSKTKPRIEEFELALTHLNLDACPTLPRAKPTKELAEALKYVSRLHKSDEEIEIENSHIPAVVYELE*
Ga0068866_105024122	3300005718	Miscanthus Rhizosphere	MWDQLPKEIRSKTKPRIEEFELAPTRLNLDTCPTLPRAKPTKELAEALKYVSRLHKSDEEIEIKNSRIPA
Ga0068866_114598512	3300005718	Miscanthus Rhizosphere	MWDQLPKEVRSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDEEIEIKNSHIPAAVYELE*
Ga0068870_110782251	3300005840	Miscanthus Rhizosphere	MKGMWDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDEEIEIENSRIPAAVYELE*
Ga0068870_111748532	3300005840	Miscanthus Rhizosphere	MWDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELTEALKYVSRLHNSNEEIEIENSRIPAAVYELE*
Ga0068871_1021118361	3300006358	Miscanthus Rhizosphere	SDKKRLREMKGMWDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDKEIEIENSRIPAAVYELE*
Ga0105244_102120522	3300009036	Miscanthus Rhizosphere	MKGMWDQLPKEIHSKTKPRIEEFELAPTRLNLDACPTLPRAKPTEELAEALKYVSRLHKSDEEIKIENSRIPAAVYELE*
Ga0105243_112532952	3300009148	Miscanthus Rhizosphere	MKGMWDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPRAKPTEELAEALKYVSRLHKSDEEIEIENSRIPATVYELE*
Ga0105243_117506811	3300009148	Miscanthus Rhizosphere	MKGMWDQLPKEIRSKTKPRIEEFELAPTRLNLDTCPTLPRAKPTEELAEALKYVSRLHKSDEEIEIKNSHIPAVVYELE*
Ga0105242_116979361	3300009176	Miscanthus Rhizosphere	MWDQLPKEIRSKMKPRIEEFELAPTRLNLDACPTLPGAKHTEELAEALKYMSRLHKTDEEIEIENSRIPAAVYELE*
Ga0157374_115034001	3300013296	Miscanthus Rhizosphere	MKGMWDQLPKEIHSKTKPRIEEFELAPTRLNLDACPTLPRAKPTEELAEALKYVSRLHKSDKEIEIENSRIPAVVYELE*
Ga0157378_120264071	3300013297	Miscanthus Rhizosphere	MNGMWDQLPKEVRSKTKPRIEEFELALTRLNLYAFPTLPGAKPTEELTEALKYVSRLHKFDEEIEIENSRILAAVYELE*
Ga0157377_113482402	3300014745	Miscanthus Rhizosphere	WQKSDRKRLREMKGMWDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDGEIEIENSRIPAAVYELE*
Ga0157376_108263051	3300014969	Miscanthus Rhizosphere	QKSYRKRLREMKGMWDQLPKEIRSKTKPRLEEFELAPTRLNLDACTTLPGAKPTEGLAEALKYVSRLHKSDEEIEIENSRIPAVVYELE*
Ga0157376_117754801	3300014969	Miscanthus Rhizosphere	RTWQAWQKSDKKRLREMKGMWDQLPKEIRSKMKPRIEEFELAPTHLNLDACPTLPGAKPTEELAKVLKYVSQLHKSDEEIEIEIENSRIPAMVYELE*
Ga0157376_125873411	3300014969	Miscanthus Rhizosphere	KMKPRIEEFELALTRLNLDACPTLPGAKPTEELAEALKYVSQLHKSDEEIEIENSRIPAAVYELE*
Ga0182122_10230891	3300015267	Miscanthus Phyllosphere	MKGIWDQLPKEIRSKTKPKIEEFDLAPTRLNLDACPTLPGAKPTEELIEALKYVSRLHKSDEEIENSRIPAAVYELE*
Ga0182113_10166141	3300015269	Miscanthus Phyllosphere	MKSMWDQLPKEIHSKTKPRIEEFELALTRLNLDACPTLLGAKPTKELVEALKYMSRLHKSDEEIEIENSRIPGAVYELE*
Ga0182188_10439431	3300015274	Miscanthus Phyllosphere	MKGMWDQLPKEIRSKTKPRIEEFELAPTRLNLDAYPTLPRAKPTEELAEALKYVSRLHKSDEEIEIENSRIPPAVYELE*
Ga0182170_10577892	3300015276	Miscanthus Phyllosphere	MSDKKRLREMKGMWDQLPKEIRSKTKPRIKEFELALTCLNLDACPTLPGAKPTEELAEALKYVSQLHKSDEEIEIENSRIPAAVYEL
Ga0182170_10657492	3300015276	Miscanthus Phyllosphere	MKGMWDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAVALKYVSRLHKSDEEIEIENSRIPAAVYELE*
Ga0182170_10781811	3300015276	Miscanthus Phyllosphere	KSDRKRLREMKGMWDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDEEIEIENSRIPAAVYELE*
Ga0182128_10069151	3300015277	Miscanthus Phyllosphere	MWDQLPKEIRGKTKPRIEEFELDSTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDEEIEIENSRILAAVYELE*
Ga0182128_10203931	3300015277	Miscanthus Phyllosphere	MKGMWDQLPKEIRSKTKPRIEEFELAPTRLYLDACPTLPGAKPTEELAEALKYVSRLHKSDKEIEIENSHILAAVYELE*
Ga0182160_10716231	3300015281	Miscanthus Phyllosphere	MKGMWDQLPKEIRIKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDEEIEIENSRILAAVYELE*
Ga0182124_10669791	3300015282	Miscanthus Phyllosphere	MKGMLDQLPREIRSKMKPRIEDFVLAPTRLNLDACPTLPGAKPTEELTEALNYVSRLHKSDEEIEIENSRIPAAVYELE*
Ga0182156_10866181	3300015283	Miscanthus Phyllosphere	MKGMWDQLPKEIRSKTKPRIEEFELASTRLNLDACPTLLGAKPTEELTEALKYVSRLHKSDEEIEIENSRIPAAVYELE*
Ga0182186_10397351	3300015285	Miscanthus Phyllosphere	MKPRIDEFELAPTRLNLDACPTLLGAKPTEELTEALKYVCRLHKFDKEIEIENSRIPATVYELE*
Ga0182176_10509241	3300015286	Miscanthus Phyllosphere	MKGMWDQLPKEIHSKTKPRIEGFELDPTRLNLDAWPTLPGAKPTDELAEALKYVSRLHKSDEEIEIENSRIPAAVYELE*
Ga0182171_10064261	3300015287	Miscanthus Phyllosphere	KSNKKRLKEMKGMWDQLPKEIHSKMKPRIEEFELALTRLNLDACPTLLGAKPTEELTEALKYVSRLHKSDEEIEIENSRIPAAVYELE*
Ga0182171_10292061	3300015287	Miscanthus Phyllosphere	MKGMWDQLPKEVRSKTKPRIEEFELALTRLNLDAYPTLSRAKPTEELAEALKYVFRLHKSDEEIEIENSRILAAVYELE*
Ga0182171_10421941	3300015287	Miscanthus Phyllosphere	MKGMWDQLPKEIRSKTKPWIEEFELASTHLNLDACPTLPRAKPTKELAEALKYVSRLHKSDEEIEIENSRILAAVYELE*
Ga0182171_10660721	3300015287	Miscanthus Phyllosphere	DKCERTWQAWQKSDKKRLREMKGMWDQLPKEIRSKTKPRIEEFELAPTHLNLDACPTLPRAKPTEELAEVLKYVSRLYKSDEEIKIENSRIPATVYELE*
Ga0182138_10277721	3300015289	Miscanthus Phyllosphere	MKGMSDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELVEALKYVSQLHKSNEEIEIENSRIPAMVYELE*
Ga0182138_10525752	3300015289	Miscanthus Phyllosphere	MKGMWDQLPKEICSKTKPRIEEFELAPTRLNLDACPTLPRAKPTEELAEALKYVSRLHKSNKEIEIENSRIPAAVYELE*
Ga0182125_10861551	3300015291	Miscanthus Phyllosphere	MKGMWDQLPKETRSKTKPRIEEFELALTRLNLDAYPTLPGAKPTEELAEALKYVSRLHKSDEEIEIENSRIPAAVYELE*
Ga0182157_10271101	3300015296	Miscanthus Phyllosphere	SKTKPRIEEFKLAPTRLNLDVCPTLPRAKPTEELTEALKYVSRLHKSDEEIEIENSRIPVAVYELE*
Ga0182106_10807512	3300015298	Miscanthus Phyllosphere	MKGMWDQLPKEIRSKTKPRIEEFELAPTCLNLDACPTLPGAKPTKELTEALKYMSRLHKSDEEIEIENSRIPA
Ga0182107_10359192	3300015299	Miscanthus Phyllosphere	MKGMWDQLPKEIRSKTKPRIEEFELAPTHLNLDTFPTLPRAKPTEELAEALKYVSRLHKSDKEIEIENSHIPAAVYELE*
Ga0182108_10690891	3300015300	Miscanthus Phyllosphere	MKGMWDQLPKEVHSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALRYVSRLHKSDEEIEIENSRIPTAVYELE*
Ga0182108_10925581	3300015300	Miscanthus Phyllosphere	MKGMWDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPGAKPIEELTEALKYMSQLHKSDEEIEIENSRIPAAVYELE*
Ga0182143_10143763	3300015302	Miscanthus Phyllosphere	DRKRLREMKGMWDQLPKEIRSKTKPRIEEFELALTRLNLDAYPTLPGAKPTEELAEALKYVSRLHKSDEEIEIKNSRIPAAVYELE*
Ga0182143_10809802	3300015302	Miscanthus Phyllosphere	MKGMWDQLPKEIRSKTKPRIEEFELAPTRFNLDACPTLPGAKPTEELVEALKYVSRLHKSDEEIEIENSRIPAAVY
Ga0182143_11027492	3300015302	Miscanthus Phyllosphere	MKGMWDQLPKEIHSKTKPRIEKFELALTRLNLDTCPTLPRAKPTEELAKALKYVSRLHKSNEEIEIENSRIPAAVYKLE*
Ga0182144_10784531	3300015307	Miscanthus Phyllosphere	EMKGMWDQLPKEIRSKTKPRIEEFELAPTRLNLDACHTLPGAKPTEELAEALKYVSRLHKYDEEIEIENSHIPAAVYELE*
Ga0182144_10961091	3300015307	Miscanthus Phyllosphere	MKGMWDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDEEIEIENSRIPAVVYELE*
Ga0182142_10799021	3300015308	Miscanthus Phyllosphere	DKCERTWQAWQKSDKKRLREIKGMWDQLPKEIHSKMKPRIGEFEVAPTRLNLDTYPTLPGAKPTEELAEALKYVSRLHMSDEEIEIENSRILATVYELE*
Ga0182142_10856461	3300015308	Miscanthus Phyllosphere	CERTWQAWQKSDKKCLREMKGMWDQLPKEIHSKTRPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDEEIEIENSRIPAAVYELE*
Ga0182140_10713771	3300015314	Miscanthus Phyllosphere	MKGMWDQLPKEICSKTKPRIEEFELALTRLKLDACPTLPRAKPTEELAEALKYVSRLHKSYEEIDIENSRIPVVVYELE*
Ga0182127_10308512	3300015321	Miscanthus Phyllosphere	SKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSQLHKSDEDIKIKNSRIPAKVYELE*
Ga0182127_10979361	3300015321	Miscanthus Phyllosphere	QDKCERTWQAWQKSDRKHLREMKGIWDQLPKEIHSKTKPRIEEFELALTRLNLDTCPALPRAKTTEELAEALKYVSRLHKSDEEIEIENSRILAAVYELE*
Ga0182127_10990081	3300015321	Miscanthus Phyllosphere	MKGMWDQLSKEIHSKMKPRIEEFELALTRLNLDACPTLHGAKPTEELAEALKYVSRLHKSDEAIEIENSRILATVYE*
Ga0182127_11217731	3300015321	Miscanthus Phyllosphere	KKRLREMKGMWDQLPKEIRSKMKPSIEEFELALTCLNLDACPMLPGAKPTEELAEALKYVSRLYKSDEEIKIENSRILAAVYELE*
Ga0182187_10905721	3300015341	Miscanthus Phyllosphere	MKGMWDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPRAKPIEELAEALKYVPRLHKFDEEIEIENSRIPA
Ga0182187_11501682	3300015341	Miscanthus Phyllosphere	MKGMWDQLPKEIRSKTKPRIEEFELAPTHLNLDACPTLPRAKPTEELAEALKYVSRLHKSNEEIEIENSRIPAA
Ga0182187_11626901	3300015341	Miscanthus Phyllosphere	MKGMWDQLPKEVCSKTKPRIEEFELALTRLNLDACPTLPRAKPTKELAEALKYVSRLHKSDEEIEIENS
Ga0182109_10926881	3300015342	Miscanthus Phyllosphere	WQKSDRKRLREMKGMWDQLPKEIRSKTKPRIEEFELAPTHLNLDAYPTLPGAKPTEELAEALKYVSRLHKSDEEIEIENSRILAAVYELE*
Ga0182109_11897771	3300015342	Miscanthus Phyllosphere	MKGMWDQLPKEIRSKTRPKMEEFELAPTRLNLDACPTLPGVKPTEELAEALKYVSRLHKSDEEIEIENSRITAVVYELE*
Ga0182109_12217691	3300015342	Miscanthus Phyllosphere	QDKCERTWQAWQKSDKKCLREMKGMWDQLPKDIRSKTKPRIEEFELAPTRLNLDACPTLPGSKPTEELVEALKYVSRLHKSDKEIEIENSRIPAMVYELE*
Ga0182155_11960272	3300015343	Miscanthus Phyllosphere	MKPRIEEFELALTRLNLDTCPTLPGAKPTEELTEALKYVSRLHKSDEEIEIENSRIPAAVYELE*
Ga0182155_12062401	3300015343	Miscanthus Phyllosphere	MKGMWDQLPKEIRSKTKPRIEEFELALTRLNLDVCPTLPRAKPTKELAKALKYVSRLHKSDEEIEIENSRIPVAVYELE*
Ga0182155_12261932	3300015343	Miscanthus Phyllosphere	MEGMWDQLPKEVCSKTKPRIEEFELALTRLNLDACPTLPRAKPTEELAEALKYVSQLHKSDEEIEIENSRIPAAVYELE*
Ga0182189_11771851	3300015344	Miscanthus Phyllosphere	MKGMWHQLPKEIHSKTKPRIEEFKLAPTHLNLDAYPTLPGAKPTEELAEALTYVSQLHKSDEEIEIENSRIPAVVYELE
Ga0182111_10652911	3300015345	Miscanthus Phyllosphere	TWQAWQKSDRKRLREMKGMWDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDGEIEIENSRIPAAVYELE*
Ga0182111_12050461	3300015345	Miscanthus Phyllosphere	MKGMWDQQSKEIRSKTKPRIEEFELALTRLNLDACPTLPGAKPTEELIVALKYVSRLHKSDEEIEIKNSRILAAVYELE*
Ga0182111_12090401	3300015345	Miscanthus Phyllosphere	AWQKSDRKRLREMKGMWDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDEEIEIENSRIPAAVYELE*
Ga0182139_10753592	3300015346	Miscanthus Phyllosphere	AWQKSDRKRLREMKGMWDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDGEIEIENSRIPAAVYELE*
Ga0182177_11983142	3300015347	Miscanthus Phyllosphere	MNGMWDQLPKEIHSKMKPRIEEFELALTRLNLYAFPTLPGAKPTEELAEALKYVSRLHKFDEEIEIENSHIPAAVYELE*
Ga0182177_12393681	3300015347	Miscanthus Phyllosphere	MKGMWDQLPKEIRSKTKPRIEEFELAPTCLNLDAFPTLPGAKPTEELAEALKYMSRLHKSDEEIEIENSRIPAAVYELE*
Ga0182161_11476803	3300015351	Miscanthus Phyllosphere	MKGMWDQLSKEIHSKMKPRIEEFELALTRLNLDAYPTLPGAEPTEELTEALKYVSRLHKSDEEIEIKNSRSQL
Ga0182161_11823871	3300015351	Miscanthus Phyllosphere	MWDQLPKEVRSKTKPRIEEFELAPTRLNLDACPTLPRAKPTEELAEALKYMSRLHKSDEEIEIENSHIPAAVYELE*
Ga0182161_11871772	3300015351	Miscanthus Phyllosphere	MKGMWDQLPKEIRSKTKLRIEEFELAPTRLNLDAYPTLPRAKPTEELVEALKYVSRLHKSDEEIKIENSRILATVYELE*
Ga0182161_12142241	3300015351	Miscanthus Phyllosphere	MKGMWDQLPKEIHSKMKPRIEEFVLAPAHLNLDAYPTLPGAKPTKELTEALKYVSRLHKSDKEIEIEIENSRIPALVYELE*
Ga0182161_12352482	3300015351	Miscanthus Phyllosphere	KGMWDQLPKEIRSKTKPRIEEFELAPTCLNLDACPTLPGAKPTEEIAEALKYVSRLHKFDEEIKIENSRILAAVYELE*
Ga0182159_12648822	3300015355	Miscanthus Phyllosphere	MKGIWDQLPKEIRSKTKPRIEEFKLAPSHLNLDACPTLPGAKPTEELAEALKYVSRLHKSDEEIEIKNSRIPATVYELE*
Ga0182159_12828032	3300015355	Miscanthus Phyllosphere	MKGMWDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELTEALKYVSRLHKSDEEIEIENSRI
Ga0182145_10923641	3300015361	Miscanthus Phyllosphere	LREMKGMWDQLPKEIRSKTRPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDEEIEIENSRIPAAVYELE*
Ga0182145_11078493	3300015361	Miscanthus Phyllosphere	MKGMLDQLPKEIRSKTKPRIKEFELAQTRLNLDAYPTPRAKPTEELAKALKYVSRLHKSDEEIKIENSRIPAAV
Ga0182145_11567352	3300015361	Miscanthus Phyllosphere	MKGMLDQLPKEIRSKTKPRVAEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDEEIEIENSRIPAAVYELE*
Ga0182203_10674882	3300017404	Miscanthus Phyllosphere	MWDQLPKEIRSKTKPRIEEFELALTRLNLDACPTLPRAKPTEELTEALKYVSRLHKSDEEIKIKNSRILAAVYELE
Ga0182220_10790092	3300017407	Miscanthus Phyllosphere	MWDQLPKEIRSKMRPRMEEFELVPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDEEIEIENSRIPAAVYELE
Ga0182220_10914561	3300017407	Miscanthus Phyllosphere	KPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVFRLHKSDEEIEIENSRIPAAVYELE
Ga0182204_10295682	3300017409	Miscanthus Phyllosphere	MKGMWDQLPKEIRNKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSQLHKSDGEIEIENSRILAAVYELE
Ga0182204_10754531	3300017409	Miscanthus Phyllosphere	MWDQLPKEIRSKKRPRMEEFELAPTRLNLDAYPTLPGAKPTEELAEALKYVSRLHKSDEEIEIENSRIPA
Ga0182204_10799321	3300017409	Miscanthus Phyllosphere	MWDQLPKEIRSKTRPRMEEFELALTRLNLDACPTLPGAKPTKELAEALKYVSRLHKSDEEIEIENSRIPAAVYELE
Ga0182204_10964881	3300017409	Miscanthus Phyllosphere	MWDQLPKEIHSKTKPRIEEFELAPTRLNLDAYPTLPGAKPTEELAEALKYVSRLHKSDEEIEIEISLIPVAVYELE
Ga0182204_11085281	3300017409	Miscanthus Phyllosphere	IRSKTKPRIEEFELALTRLNLDACPTLPRAKPTEDLAEALKYVSRLHKSDEEIEIENSRIPAAVYELE
Ga0182207_11280741	3300017410	Miscanthus Phyllosphere	MKPRIEEFELALTRLNLDACPTLPRAKPTEELAEALKYVSRLHKSDEEIEIENSRIPTA
Ga0182208_10863731	3300017411	Miscanthus Phyllosphere	LQDKCERTWQAWQKSDKKRLREMKGMWDQLPKEIRSKMKPRIEEFELALTRLNLDACPTLPRAKPTEELTEALKYVSRLHKSDEEIEIENSCIPAAVYELE
Ga0182202_11170402	3300017415	Miscanthus Phyllosphere	WQKSNRKRLKEMKGMWDQLPKEIRSRTKPRVEEFELAPTRLNLDACPTLPRAKPIEELTEALKYVSRLHKSDEEIEIKNSRIPVVVYELE
Ga0182202_11281241	3300017415	Miscanthus Phyllosphere	MWDQLPKEVRSKTKPRIEEFELAPTCLNLDACPTLPGAKPTEELAEALKYVSRLYKLDEEIEIKNSRIPAAVYELE
Ga0182230_10342052	3300017417	Miscanthus Phyllosphere	MWDQLPKEIRSKTKPRIEEFEFAPTRLNLDACPTLPGAKPTEELAEALKYVSQLHKSDEEIEIENSRIPAAVYKLE
Ga0182230_11024801	3300017417	Miscanthus Phyllosphere	MWDQLPKEVRSKMKPRIEEFELAPTCLNLDACPTLPGAKPTEELAEALKYVSQLHKSDEEIEIENSRILAAVYELE
Ga0182228_10155341	3300017420	Miscanthus Phyllosphere	IRSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDGEIEIENSRIPAAVYELE
Ga0182228_10320511	3300017420	Miscanthus Phyllosphere	QAWQKSDKKCLREMKGMWDQLPKEIHSKTKPRIEEFELAPTRLNQDACPTLPRAKPTEELAEALKYVSRLHKSDEEIEIENSRIPAVVYELE
Ga0182228_11253162	3300017420	Miscanthus Phyllosphere	MWDQLPKEIHSKMKPRIEEFELAPTRLNLDACPTLPGAKPTEELTEASKYVSRLHKSDEEIEIENSRIPATVYELE
Ga0182219_10316431	3300017424	Miscanthus Phyllosphere	REMKGMWDQLPKEIRSKMKPRIEEFELAPTCLNLDACPTLPGAKPTEELAEALKYVSQLHKSDEEIEIENSRILAAVYELE
Ga0182219_10675432	3300017424	Miscanthus Phyllosphere	RLREMKGMWDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELTEALKYVSRLHKSDEEIEIKNSRILAAVYELE
Ga0182224_10320022	3300017425	Miscanthus Phyllosphere	WDQLPKEICSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSNGEIEIENSRIPAAVYELE
Ga0182224_10739271	3300017425	Miscanthus Phyllosphere	MKGMWDQLPKEIRSKTKPRLEEFELAPTRLNLDACPTLPRAKPTEELVEALKYVSRLHKSDEEIEIENSRIPAVVYELE
Ga0182224_10956411	3300017425	Miscanthus Phyllosphere	MWDQLPKEIRSKMKPRIEEFELAPTCLNLDAYPTLPGAKPTEELTEALKYMSQIHKSDEEIEIKNNRIQATVYELE
Ga0182192_11653891	3300017430	Miscanthus Phyllosphere	AWQKSDKKRLREMKGMWDQLPKEIRSKTKPRIDEFELAPTHLNLDACHTLPGAKPTDELAEALKYVSWLHKSDEEIKIENSRIPAVVYELE
Ga0182191_11054482	3300017438	Miscanthus Phyllosphere	MWDQLPKEICSKTKPRIEEFELAPTRLNLDACPTLPRAKLTEELAEALKYVSRLHKSNEEIEIENSRILAVVYELE
Ga0182191_11185351	3300017438	Miscanthus Phyllosphere	MWDQLPKEIHSKMKPRIEEFKLAPTRLNLDAYPTLPRAKPTEELAEALKYVSRLHKSDEEIEIENSRIPAAVYELE
Ga0182221_10550991	3300017442	Miscanthus Phyllosphere	TWQAWQKSDRKRLREMKGMWDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDGEIEIENSRIPAAVYELE
Ga0182221_11486811	3300017442	Miscanthus Phyllosphere	KKRLREMKGMWDQLPKEIHSKTKPRIEGLELALTHLNLDAYPTLPRAKPTKELAEALKYVSQLYKSDEEIEIENSRIPAVVYELE
Ga0182221_11686561	3300017442	Miscanthus Phyllosphere	KEIRSKMKPRIEEFELAPTRLNLDACPTLPGAKPTKELAEALKYVSXLHKSDEEIKIENSRIPAAVYELE
Ga0182193_11443601	3300017443	Miscanthus Phyllosphere	HSKTRPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDEEIEIENSRIPAAVYELE
Ga0182233_10409572	3300017680	Miscanthus Phyllosphere	MKGMWDQLPKEICSKMKPRIEEFELALTRLNLDAYPTLPRAKPTEELVEALMYVSRLHKSNEEIEIENSRSPVVVYELE
Ga0182233_10552152	3300017680	Miscanthus Phyllosphere	LPKEIRSKMKPRIEEFELAPTRLNLDAYPTLPRAKPTKELAEALKYVSRLHKLDEEIEIENGRIPAAVYELE
Ga0182233_10710911	3300017680	Miscanthus Phyllosphere	MWDQLPKEIRSKTKPRVEEFELAPTCLNLDACPTLPRANPTEELAEALKYVSXLHKFDEKIEIENSRIPATVDELE
Ga0182226_10806611	3300017681	Miscanthus Phyllosphere	NKKRLREMKSMWDQLPKEIHSKTKPRIEEFELALTRLNLDACPTLPRAKPTEELAEALKYVSRLHKSDEEIEIENSRILAAVYELE
Ga0182229_10502562	3300017682	Miscanthus Phyllosphere	MWDQLPKEIRSKTKPRIEEFELAPTCLNLDACPTLPRAKPIEELAEALKYVSRLHKSDEETEIENNRIPAAVYELE
Ga0182229_10689752	3300017682	Miscanthus Phyllosphere	MWDQLPKEVRSKTKPRIEEFELAPTRLNLDTCPTLPRAKPTEELTEALKYVSRLHNSNEEIEIENSRIPAAVYELE
Ga0182229_10886191	3300017682	Miscanthus Phyllosphere	KTKPRIEEFELALTHLNLDACPTLPRAKPTEELAEALKYVYQLHKSDEEIEIENSRIPAAVYELE
Ga0182218_10961041	3300017683	Miscanthus Phyllosphere	MWDQLPKEIHSKTKPRIEEFELAPTHLNLDACPTLPRAKPTEELAEALKYVSRLHKSDEEIEIENSRIPAAVYELE
Ga0182225_10545761	3300017684	Miscanthus Phyllosphere	MWDQLPKEIHSKTKPRIEESELAPTRLNLDACPTLPGAKPTKELAEALKYMSRLHKSDEEIEIENSRIPAVVYGLE
Ga0182225_11141981	3300017684	Miscanthus Phyllosphere	GKGCQRRKKIRSKRTPRXELFGVAPTRHTLDACPTLPRAKPTEELAESLKYMSRLHKSDEEIKIENSHIPAAVYELE
Ga0182225_11269921	3300017684	Miscanthus Phyllosphere	MWDQLPKEIRSKTRPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDEEIEIENSRIPAAVYELE
Ga0182227_10548871	3300017685	Miscanthus Phyllosphere	EMKGMWDQLPKEVRSKTKPRIEEFELAPTRLNLDACPTLPRAKPTEELAEALKYVSRLHKSDEEIEIENSHIPAAVYELE
Ga0182227_10618681	3300017685	Miscanthus Phyllosphere	MWDQLPKEIRSKTKPRIEEFELAPSRLNLDACPTLPGAKPTEELTEALKYVSRLHKSDKEIEIENSRILAVVYELE
Ga0182232_10825161	3300021060	Phyllosphere	MWDQLPKEIHSKTKHRIEEFELAPTCLNLDACPTLPGAKPTEELVEDLKYVSRLHKSNEEIEIENSRILAAVYELE
Ga0207688_102432712	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MWDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDEEIEIKNSRIPAAVYELE
Ga0207687_115651452	3300025927	Miscanthus Rhizosphere	MWDQLPKEIHSKTKPRIEEFELALTRLNLDACPTLPGAKPTEELAEALKYVSQLHKSDEEIEIENSRIPAAVYELE
Ga0207686_116212331	3300025934	Miscanthus Rhizosphere	MWDQLPKEIRSKTRPRIEEFELALTRLNLDACPTLPEAKPTEELAEALKYVSRLHKSDEEIEIENSRIPAAVYELD
Ga0207709_103017833	3300025935	Miscanthus Rhizosphere	MWDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSDEEIEIENSRIPAAVYELE
Ga0207669_103941592	3300025937	Miscanthus Rhizosphere	MWDQLPKEIRSKTKPRIEEFELAPTHLNLDACPTLPGAKPTEELAEALKYVSRLHKSDEEIEIENSRIPAAVYELE
Ga0207702_111280802	3300026078	Corn Rhizosphere	MWDQLPKEIRSKTKPRIEEFELAPTRLNLDACPTLPGAKPTEELAEALKYVSRLHKSNEEIEIENSRIPAAVYELE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063730

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences