Metagenome / Metatranscriptome Family F063685

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F063685
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	46 residues
Representative Sequence	MTIELDNYGFMLDTEWCYVALSWQLLITTALLVTAYKIYKRKKNK
Number of Associated Samples	99
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.38 %
% of genes near scaffold ends (potentially truncated)	20.16 %
% of genes from short scaffolds (< 2000 bps)	73.64 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (40.310 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (24.806 % of family members)
Environment Ontology (ENVO)	Unclassified (59.690 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (70.543 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.53% β-sheet: 0.00% Coil/Unstructured: 42.47%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF06067	DUF932	3.88
PF01844	HNH	2.33
PF13640	2OG-FeII_Oxy_3	1.55
PF01464	SLT	1.55
PF02867	Ribonuc_red_lgC	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0209	Ribonucleotide reductase alpha subunit	Nucleotide transport and metabolism [F]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.69 %
Unclassified	root	N/A	40.31 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	59.69 %
Unclassified	root	N/A	40.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.33 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	26.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.33 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	26.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.33 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	26.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.33 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	26.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.33 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	23.26 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.31 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	33.33 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	23.26 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000206\|M3P_c10028971	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	815	Open in IMG/M
3300001282\|B570J14230_10061203	All Organisms → Viruses → Predicted Viral	1216	Open in IMG/M
3300002408\|B570J29032_109631346	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	963	Open in IMG/M
3300002835\|B570J40625_100322827	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1548	Open in IMG/M
3300002835\|B570J40625_101295957	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	605	Open in IMG/M
3300003429\|JGI25914J50564_10056890	All Organisms → Viruses → Predicted Viral	1039	Open in IMG/M
3300003430\|JGI25921J50272_10017231	All Organisms → Viruses → Predicted Viral	2005	Open in IMG/M
3300003491\|JGI25924J51412_1078179	Not Available	501	Open in IMG/M
3300003497\|JGI25925J51416_10145468	Not Available	540	Open in IMG/M
3300004795\|Ga0007756_11638133	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	534	Open in IMG/M
3300005069\|Ga0071350_1000039	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	18683	Open in IMG/M
3300005517\|Ga0070374_10098984	All Organisms → Viruses → Predicted Viral	1519	Open in IMG/M
3300005517\|Ga0070374_10252330	Not Available	902	Open in IMG/M
3300005517\|Ga0070374_10343507	Not Available	754	Open in IMG/M
3300005517\|Ga0070374_10505680	Not Available	603	Open in IMG/M
3300005517\|Ga0070374_10518275	Not Available	594	Open in IMG/M
3300005528\|Ga0068872_10378234	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	773	Open in IMG/M
3300005580\|Ga0049083_10086196	All Organisms → Viruses → Predicted Viral	1093	Open in IMG/M
3300005583\|Ga0049085_10076889	All Organisms → Viruses → Predicted Viral	1169	Open in IMG/M
3300005583\|Ga0049085_10168953	Not Available	733	Open in IMG/M
3300005662\|Ga0078894_10932599	Not Available	751	Open in IMG/M
3300005662\|Ga0078894_11554637	Not Available	547	Open in IMG/M
3300005662\|Ga0078894_11563869	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	545	Open in IMG/M
3300005662\|Ga0078894_11566857	Not Available	545	Open in IMG/M
3300005940\|Ga0073913_10007645	Not Available	1434	Open in IMG/M
3300006484\|Ga0070744_10212965	Not Available	549	Open in IMG/M
3300006484\|Ga0070744_10230069	Not Available	525	Open in IMG/M
3300006639\|Ga0079301_1008078	All Organisms → Viruses → Predicted Viral	4055	Open in IMG/M
3300007545\|Ga0102873_1119120	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	797	Open in IMG/M
3300007600\|Ga0102920_1063527	All Organisms → Viruses → Predicted Viral	1159	Open in IMG/M
3300007621\|Ga0102872_1144095	Not Available	632	Open in IMG/M
3300007624\|Ga0102878_1173169	Not Available	623	Open in IMG/M
3300007634\|Ga0102901_1114500	Not Available	769	Open in IMG/M
3300007639\|Ga0102865_1107028	Not Available	836	Open in IMG/M
3300007644\|Ga0102902_1206383	Not Available	579	Open in IMG/M
3300007653\|Ga0102868_1016965	All Organisms → Viruses → Predicted Viral	1520	Open in IMG/M
3300007706\|Ga0102899_1194863	Not Available	511	Open in IMG/M
3300007992\|Ga0105748_10444556	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	563	Open in IMG/M
3300008021\|Ga0102922_1055144	All Organisms → Viruses → Predicted Viral	1240	Open in IMG/M
3300008107\|Ga0114340_1006151	Not Available	6321	Open in IMG/M
3300008107\|Ga0114340_1054437	All Organisms → Viruses → Predicted Viral	1740	Open in IMG/M
3300008107\|Ga0114340_1075211	Not Available	2420	Open in IMG/M
3300008107\|Ga0114340_1267471	Not Available	510	Open in IMG/M
3300008113\|Ga0114346_1066746	Not Available	1737	Open in IMG/M
3300008261\|Ga0114336_1047133	All Organisms → Viruses → Predicted Viral	3189	Open in IMG/M
3300008261\|Ga0114336_1235777	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1607	Open in IMG/M
3300009026\|Ga0102829_1329070	Not Available	512	Open in IMG/M
3300009056\|Ga0102860_1031883	All Organisms → Viruses → Predicted Viral	1386	Open in IMG/M
3300009068\|Ga0114973_10036456	All Organisms → Viruses → Predicted Viral	2951	Open in IMG/M
3300009068\|Ga0114973_10054981	All Organisms → Viruses → Predicted Viral	2341	Open in IMG/M
3300009152\|Ga0114980_10216460	All Organisms → Viruses → Predicted Viral	1124	Open in IMG/M
3300009155\|Ga0114968_10005401	Not Available	9486	Open in IMG/M
3300009158\|Ga0114977_10705350	Not Available	537	Open in IMG/M
3300009159\|Ga0114978_10744492	Not Available	556	Open in IMG/M
3300009161\|Ga0114966_10008135	Not Available	8556	Open in IMG/M
3300009161\|Ga0114966_10098304	All Organisms → Viruses → Predicted Viral	1972	Open in IMG/M
3300009161\|Ga0114966_10251577	All Organisms → Viruses → Predicted Viral	1091	Open in IMG/M
3300009163\|Ga0114970_10373283	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	798	Open in IMG/M
3300009164\|Ga0114975_10610130	Not Available	581	Open in IMG/M
3300009164\|Ga0114975_10729210	Not Available	522	Open in IMG/M
3300009180\|Ga0114979_10049099	All Organisms → Viruses → Predicted Viral	2647	Open in IMG/M
3300009181\|Ga0114969_10602074	Not Available	602	Open in IMG/M
3300009184\|Ga0114976_10121355	Not Available	1479	Open in IMG/M
3300009184\|Ga0114976_10124632	All Organisms → Viruses → Predicted Viral	1456	Open in IMG/M
3300009194\|Ga0114983_1010575	All Organisms → Viruses → Predicted Viral	2716	Open in IMG/M
3300010160\|Ga0114967_10650101	Not Available	503	Open in IMG/M
3300010388\|Ga0136551_1000342	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	13666	Open in IMG/M
3300010388\|Ga0136551_1034794	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	942	Open in IMG/M
3300010885\|Ga0133913_11399032	All Organisms → Viruses → Predicted Viral	1779	Open in IMG/M
3300010885\|Ga0133913_13078768	All Organisms → Viruses → Predicted Viral	1108	Open in IMG/M
3300012286\|Ga0157137_105327	Not Available	842	Open in IMG/M
3300012665\|Ga0157210_1005903	All Organisms → Viruses → Predicted Viral	2427	Open in IMG/M
3300012766\|Ga0138282_1181201	Not Available	501	Open in IMG/M
3300013004\|Ga0164293_10850797	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	576	Open in IMG/M
3300013295\|Ga0170791_15498473	Not Available	740	Open in IMG/M
3300020141\|Ga0211732_1175929	Not Available	9869	Open in IMG/M
3300020151\|Ga0211736_10320388	Not Available	517	Open in IMG/M
3300020498\|Ga0208050_1027233	Not Available	575	Open in IMG/M
3300020531\|Ga0208487_1013759	All Organisms → Viruses → Predicted Viral	1027	Open in IMG/M
3300020549\|Ga0207942_1000383	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	11521	Open in IMG/M
3300020560\|Ga0208852_1050071	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	697	Open in IMG/M
3300020562\|Ga0208597_1025310	All Organisms → Viruses → Predicted Viral	1305	Open in IMG/M
3300021602\|Ga0194060_10146008	All Organisms → Viruses → Predicted Viral	1258	Open in IMG/M
3300021961\|Ga0222714_10121677	All Organisms → Viruses → Predicted Viral	1610	Open in IMG/M
3300021962\|Ga0222713_10098711	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2097	Open in IMG/M
3300023174\|Ga0214921_10311759	Not Available	867	Open in IMG/M
3300023184\|Ga0214919_10596967	Not Available	652	Open in IMG/M
3300024343\|Ga0244777_10022378	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3998	Open in IMG/M
3300024346\|Ga0244775_10042034	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4020	Open in IMG/M
3300024348\|Ga0244776_10239167	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1269	Open in IMG/M
3300027114\|Ga0208009_1004072	All Organisms → Viruses → Predicted Viral	3941	Open in IMG/M
3300027141\|Ga0255076_1080997	Not Available	531	Open in IMG/M
3300027365\|Ga0209300_1010403	All Organisms → Viruses → Predicted Viral	2530	Open in IMG/M
3300027531\|Ga0208682_1019419	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1859	Open in IMG/M
3300027597\|Ga0255088_1071916	Not Available	655	Open in IMG/M
3300027627\|Ga0208942_1003166	Not Available	5758	Open in IMG/M
3300027627\|Ga0208942_1068101	All Organisms → Viruses → Predicted Viral	1060	Open in IMG/M
3300027631\|Ga0208133_1027062	All Organisms → Viruses → Predicted Viral	1450	Open in IMG/M
3300027644\|Ga0209356_1001711	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8530	Open in IMG/M
3300027656\|Ga0209357_1083191	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	934	Open in IMG/M
3300027689\|Ga0209551_1018533	All Organisms → Viruses → Predicted Viral	2368	Open in IMG/M
3300027710\|Ga0209599_10002377	Not Available	7815	Open in IMG/M
3300027710\|Ga0209599_10009316	All Organisms → Viruses → Predicted Viral	3078	Open in IMG/M
3300027734\|Ga0209087_1082481	All Organisms → Viruses → Predicted Viral	1395	Open in IMG/M
3300027736\|Ga0209190_1245771	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	710	Open in IMG/M
3300027754\|Ga0209596_1001217	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	22549	Open in IMG/M
3300027754\|Ga0209596_1005319	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9543	Open in IMG/M
3300027754\|Ga0209596_1037737	All Organisms → Viruses → Predicted Viral	2647	Open in IMG/M
3300027756\|Ga0209444_10156397	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	867	Open in IMG/M
3300027759\|Ga0209296_1084302	All Organisms → Viruses → Predicted Viral	1557	Open in IMG/M
3300027760\|Ga0209598_10144793	All Organisms → Viruses → Predicted Viral	1061	Open in IMG/M
3300027769\|Ga0209770_10388925	Not Available	517	Open in IMG/M
3300027770\|Ga0209086_10168885	All Organisms → Viruses → Predicted Viral	1038	Open in IMG/M
3300027782\|Ga0209500_10041994	All Organisms → Viruses → Predicted Viral	2500	Open in IMG/M
3300027782\|Ga0209500_10064492	All Organisms → Viruses → Predicted Viral	1905	Open in IMG/M
3300027892\|Ga0209550_10395470	Not Available	857	Open in IMG/M
3300027892\|Ga0209550_10409924	Not Available	836	Open in IMG/M
3300027963\|Ga0209400_1191660	Not Available	854	Open in IMG/M
3300027969\|Ga0209191_1198481	Not Available	791	Open in IMG/M
3300028025\|Ga0247723_1008491	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4229	Open in IMG/M
3300028025\|Ga0247723_1029474	All Organisms → Viruses → Predicted Viral	1747	Open in IMG/M
3300031784\|Ga0315899_11318532	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	617	Open in IMG/M
3300034050\|Ga0335023_0420109	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	704	Open in IMG/M
3300034066\|Ga0335019_0509697	Not Available	717	Open in IMG/M
3300034101\|Ga0335027_0003920	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13087	Open in IMG/M
3300034101\|Ga0335027_0337047	All Organisms → Viruses → Predicted Viral	1003	Open in IMG/M
3300034102\|Ga0335029_0147469	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1613	Open in IMG/M
3300034168\|Ga0335061_0020810	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3483	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	93.02%
Terrestrial	Environmental → Terrestrial	6.98%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	75.97%
Marine	Environmental → Aquatic → Marine	17.05%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	6.20%
Soil	Environmental → Terrestrial → Soil	0.78%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	40.31%
Lentic	Environmental → Aquatic → Freshwater → Lentic	29.46%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	11.63%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	6.20%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.65%
Lotic	Environmental → Aquatic → Freshwater → Lotic	2.33%
River	Environmental → Aquatic → Freshwater → River	1.55%
Pond	Environmental → Aquatic → Freshwater → Pond	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.78%
Coastal	Environmental → Aquatic → Marine → Coastal	0.78%
Sand	Environmental → Terrestrial → Soil → Sand	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	40.31%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	23.26%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	11.63%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	6.20%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	6.20%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.65%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	24.81%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	17.83%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	11.63%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.98%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	6.20%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	5.43%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	4.65%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	3.10%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	3.88%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.33%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.55%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.55%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.55%
Pond Fresh Water	Environmental → Aquatic → Freshwater → Pond → Unclassified → Pond Fresh Water	1.55%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.55%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.55%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.78%
Lotic	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Lotic	0.78%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.78%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	0.78%
Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000206	Lotic microbial communities from Mississippi River at two locations in the state of Minnesota, sample from River Site 1, Mississippi Headwaters	Environmental	Open in IMG/M
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003429	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN	Environmental	Open in IMG/M
3300003430	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD	Environmental	Open in IMG/M
3300003491	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD	Environmental	Open in IMG/M
3300003497	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN	Environmental	Open in IMG/M
3300004795	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005069	Metagenomes from Harmful Algal Blooms in Lake Erie, HABS-E2014-0024	Environmental	Open in IMG/M
3300005517	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005580	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRF	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005940	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006639	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11	Environmental	Open in IMG/M
3300007545	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3	Environmental	Open in IMG/M
3300007600	Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3	Environmental	Open in IMG/M
3300007621	Estuarine microbial communities from the Columbia River estuary - metaG 1547A-3	Environmental	Open in IMG/M
3300007624	Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02	Environmental	Open in IMG/M
3300007634	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02	Environmental	Open in IMG/M
3300007639	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02	Environmental	Open in IMG/M
3300007644	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-02	Environmental	Open in IMG/M
3300007653	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-3	Environmental	Open in IMG/M
3300007706	Estuarine microbial communities from the Columbia River estuary - metaG 1555B-3	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008021	Estuarine microbial communities from the Columbia River estuary - metaG 1569A-3	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009056	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300009194	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 RT	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010388	Freshwater microbial communities from the surface of the forest pond in Jussy, Geneva, Switzerland - JEBV, may 2015	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012286	Freshwater microbial communities from Ausable River, Ontario, Canada - S47	Environmental	Open in IMG/M
3300012665	Freshwater microbial communities from Talbot River, Ontario, Canada - S11	Environmental	Open in IMG/M
3300012766	Freshwater microbial communities from Lake Montjoie, Canada - M_140807_M_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020498	Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020531	Freshwater microbial communities from Lake Mendota, WI - 21SEP2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020549	Freshwater microbial communities from Lake Mendota, WI - 12OCT2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020560	Freshwater microbial communities from Lake Mendota, WI - 18JUN2009 deep hole epilimnion ns (SPAdes)	Environmental	Open in IMG/M
3300020562	Freshwater microbial communities from Lake Mendota, WI - 05MAY2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021602	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5m	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300027114	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_16 (SPAdes)	Environmental	Open in IMG/M
3300027141	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Law_RepB_8h	Environmental	Open in IMG/M
3300027365	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 RT (SPAdes)	Environmental	Open in IMG/M
3300027531	Estuarine microbial communities from the Columbia River estuary - metaG 1568-02 (SPAdes)	Environmental	Open in IMG/M
3300027597	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepB_8d	Environmental	Open in IMG/M
3300027627	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF (SPAdes)	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027644	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027656	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (SPAdes)	Environmental	Open in IMG/M
3300027689	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027756	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027760	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027769	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027892	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental	Open in IMG/M
3300034066	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Jul2017-rr0087	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034168	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME06Apr2016-rr0183	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
M3P_100289713	3300000206	Lotic	MTIELDNYGLMLDTEWCYIALSWQLLITTALVAVGYKVYKKWKTKNDK*
B570J14230_100612035	3300001282	Freshwater	MTIELDNYGFMLDTEWCYVALSWQLLITTTLLVTAYKIYKRKKNK*
B570J29032_1096313463	3300002408	Freshwater	DTYGFMLDTEWAYVALSWQLLITSALLITAYKIYKIYLKRNGLVGWNY*
B570J40625_1003228274	3300002835	Freshwater	MSEGFFTIELGRYGFMFDTEWCYVAISWQLIITSALVFAGYKFYKRKKITK*
B570J40625_1012959572	3300002835	Freshwater	MTIEIDTYGFMLDTEWAYVALSWQLLITSALLITAYKIYKIYLKRNGLVGWNY*
JGI25914J50564_100568901	3300003429	Freshwater Lake	MTIELDNYGFMLDTEWCYIALSWQLLITTALLAVGYKYYKKWKTKNVK*
JGI25921J50272_100172313	3300003430	Freshwater Lake	MLSIELDNYGFMLDTEWCYIALSWQLLATAVLLGVGYKYYKKWKNTNDK*
JGI25924J51412_10781792	3300003491	Freshwater Lake	MIIELDTYGFMFDTEWAYVSLSWQLLITSALLGIAYKFYLVRKAK*
JGI25925J51416_101454682	3300003497	Freshwater Lake	MKIELDXFGFMFNTEWAYVSLSWELLIASVLLGVAYKFYKIRKGK*
Ga0007756_116381331	3300004795	Freshwater Lake	MTIEIDTYGFMLDTEWAYVALSWQLLITTALLITAYKIYKRKKNK*
Ga0071350_100003912	3300005069	Freshwater	MTIELDNYGFMLDTEWCYIALSWQLLITAGVIFAGYKAYKKWKTTNDN*
Ga0070374_100989843	3300005517	Freshwater Lake	MKIELDNYGFMLETEWCYVALSWQLLITTALLLTAYKVYKRMRVK*
Ga0070374_102523304	3300005517	Freshwater Lake	MTIELDNYGFMLDTEWCYVALSWQLLITTALLVTAYKIYKRKKNK*
Ga0070374_103435074	3300005517	Freshwater Lake	ELDNYGFMLDTEWCYVALSWQLLITTALLVTAYKIYKRKKNK*
Ga0070374_105056801	3300005517	Freshwater Lake	MTIELDQYGLMIDTELFYIALTWQIMITTALVITAYKIYKRKKNK*
Ga0070374_105182751	3300005517	Freshwater Lake	MTIELDNYGFMLDTEWCYIALSWQLLITAGVIFAGYKAYKKWKTNNDK*
Ga0068872_103782344	3300005528	Freshwater Lake	MTIEIDTYGFMLDTEWAYVALSWQLLITSALLGIAYKIYKRKKNK*
Ga0049083_100861964	3300005580	Freshwater Lentic	MSEGFFTIEVDTYGFMLDSAWCYVALSWQLLITTTLLITAYKIYKRKKNK*
Ga0049085_100768891	3300005583	Freshwater Lentic	MKIELDSFGFMFNTEWAYVSLSWELLIVSVLLGVAYKFYKVRK
Ga0049085_101689532	3300005583	Freshwater Lentic	MTIELDTYGFMFDTEWAYVSLSWQLLITSALLGIVYKFYKVRKGK*
Ga0078894_109325993	3300005662	Freshwater Lake	MTIEIDTYGFMLDTEWAYVALSWQLLITSALLGIAYKFYLVRKAK*
Ga0078894_115546372	3300005662	Freshwater Lake	MKIELDNYGFMLETEWCYVALSWQLLITTALLLTAYKIYKRKKNK*
Ga0078894_115638693	3300005662	Freshwater Lake	MTIELDNYGFMLDTEWCYIALSWQLLITTALLAVGYKYY
Ga0078894_115668572	3300005662	Freshwater Lake	LQCKRGRGKVMKIELDNYGFMLETEWCYVALSWQLLITSALLLTAYKVYKRMRVK*
Ga0073913_100076453	3300005940	Sand	MNEGFFTIEIGSYGFMLDTKWCYIALSWQLIITATLLTIAYKIYKRKKNK*
Ga0070744_102129652	3300006484	Estuarine	MKIELDSFGFMFNTEWAYVSLSWELLIVSVLLGVAYKFYKIRKGK*
Ga0070744_102300693	3300006484	Estuarine	MTIELDNYGFMLDTEWAYVALSWQLLITTALVITAYKIYKIKRGK*
Ga0079301_10080785	3300006639	Deep Subsurface	MSEGFFTIEVDTYGFMLDSAWCYVALSWQLLITTTLLITAYKIYKIRKNK*
Ga0102873_11191201	3300007545	Estuarine	YGFMLDTEWCYIALSWQLLITTALLAVGYKYYKKWKTKNVK*
Ga0102920_10635273	3300007600	Estuarine	MTIELDNYGFMLDTEWCYIALSWQLLITTALLAVGYKYYKKWKTK
Ga0102872_11440952	3300007621	Estuarine	MTIELDTYGFMFDTEWAYVALSWQLLITTALVVVAYKAYKKWGNRK*
Ga0102878_11731691	3300007624	Estuarine	MTIELDNYGFMLDTEWAYVALSWQLLITTALVAVAYKAYKKWGNRK*
Ga0102901_11145002	3300007634	Estuarine	MKIELDSYGFMFNTEWAYVSLSWELLIVSVLLGVAYKFYKIRKGK*
Ga0102865_11070282	3300007639	Estuarine	MTIELDTYGFMFDTEWAYVALSWQLLITTALVITAYKIYKIKRGK*
Ga0102902_12063831	3300007644	Estuarine	IELDNYGFMLDTEWCYIALSWQLLITAGVIFAGYKAYKKWKTTNDN*
Ga0102868_10169652	3300007653	Estuarine	MTIELDNYGFMLDTEWCYIALSWQLLITTALVAVGYKYYKKWKTKNVK*
Ga0102899_11948632	3300007706	Estuarine	NYGFMLDTEWCYIALSWQLLITAGVIFAGYKAYKKWKTTNDN*
Ga0105748_104445563	3300007992	Estuary Water	MTIELDNYGFMLDTEWAYVALSWQLLITSALLGIAYKFYLVRRAK*
Ga0102922_10551444	3300008021	Estuarine	MTIELENYGFMLDTEWCYIALSWQLLITTALLAVGYKYYKKWKTKNVK*
Ga0114340_10061511	3300008107	Freshwater, Plankton	MSEGFFTIELGRYGFMFDTNWSYVAISWELIIISALVFAGYKFYKRKKITK*
Ga0114340_10544371	3300008107	Freshwater, Plankton	MTIEIDTYGFMLDTEWAYVALSWQLLITTALLITAYKIYKRKKITK*
Ga0114340_10752117	3300008107	Freshwater, Plankton	MSEGILTIELDSYGFLFDTQWCYVALSWQLLAITALVVIGYKIYKRRKGK*
Ga0114340_12674711	3300008107	Freshwater, Plankton	LTIELDSYGFMLDTELCYVALSWGLIIPAVILVVAYKIYKRRKGK*
Ga0114346_10667466	3300008113	Freshwater, Plankton	TELMTIELDNYGFMLDTEWCYIALSWQLLITAGVIFAGYKAYKKWKIKNDN*
Ga0114336_10471332	3300008261	Freshwater, Plankton	MTLELDNYGLMLDTEWAYIALSWPLLITAGVIFAGYKAYKKWKTTNDK*
Ga0114336_12357773	3300008261	Freshwater, Plankton	MTIELDNYGFMLDTEWCYIALSWQLLITAGVIFAGYKAYKKWKIKNDN*
Ga0102829_13290701	3300009026	Estuarine	MKIELDSFGFMFNTEWAYVSLSWELLIVSVLLGVAYKFYKVRKAK*
Ga0102860_10318835	3300009056	Estuarine	MTIEIDTYGFMLDTEWAYVALSWQLLITSALLGIAYKFYKIRKAK*
Ga0114973_100364562	3300009068	Freshwater Lake	MTIEIDTYGFMLDTEWAYVALSWQLLITSALLITAYKIYKIKRGK*
Ga0114973_100549813	3300009068	Freshwater Lake	MTIELGDYGFMLDTEWAYVALSWQLLITSALLGIAYKFYLIRKAK*
Ga0114980_102164604	3300009152	Freshwater Lake	MTIEIDNYGFMLDTEWAYVALSWQLLISTALLITAYKIYKIKRGK*
Ga0114968_1000540125	3300009155	Freshwater Lake	MKIELDSFGFMFNTEWAYVSLSWELLIASVLLGVAYKFYKIRKAK*
Ga0114977_107053503	3300009158	Freshwater Lake	MTIELDTYGFMLDTEWAYVALSWQLLITSALLGIAYKFYLVRKAK*
Ga0114978_107444922	3300009159	Freshwater Lake	DTYGFMLDTEWAYVALSWQLLITSALLGIAYKFYLVRKAK*
Ga0114966_1000813514	3300009161	Freshwater Lake	MTIELDDYGFMFDTEWCYVALSWQLLIITALLAVAYKAYKKWGNRK*
Ga0114966_100983041	3300009161	Freshwater Lake	YGFMLDTEWAYVALSWQLLITSALLGIAYKFYLIRKAK*
Ga0114966_102515772	3300009161	Freshwater Lake	MTIELDNYGFMLDTEWCYVALSWQLLITTALLITAYKIYKIKRGK*
Ga0114970_103732831	3300009163	Freshwater Lake	RLELMKIELDSFGFMFNTEWAYVSLSWELLIASVLLGVAYKFYKIRKAK
Ga0114975_106101302	3300009164	Freshwater Lake	DTYGFMLDTEWAYVALSWQLLITTALLITAYKIYKRKKNK*
Ga0114975_107292101	3300009164	Freshwater Lake	TYGFMLDTEWAYVALSWQLLITTALLITAYKIYKIKRGK*
Ga0114979_100490998	3300009180	Freshwater Lake	MTIEIDNYGFMLDTEWAYVALSWQLLITTALLITAYKIYKRKKNK*
Ga0114969_106020742	3300009181	Freshwater Lake	MTIELDTYGFMFDTEWAYIALSWQLLITTALVAVAYKAYKKWGNRK*
Ga0114976_101213551	3300009184	Freshwater Lake	TYGFMLDTEWAYVALSWQLLITTALLITAYKIYKRKKNK*
Ga0114976_101246321	3300009184	Freshwater Lake	MTIEIDTYGFMLDTEWAYVALSWQLLITTALLITAYKIYKIKRGK*
Ga0114983_10105751	3300009194	Deep Subsurface	MSEGILTIELGRYGFMLDTEWCYIALSWELLAATTLLTIAYKIYKRKKNK*
Ga0114967_106501012	3300010160	Freshwater Lake	MTIEIDTYGFMLDTEWAYVALSWQLLITTALLGIAYKFYLVRKAK*
Ga0136551_100034232	3300010388	Pond Fresh Water	MSEGFFTIEIDNYGFMLDTEWAYIALSWQLLTLTALVVIGYKIYKRKKNK*
Ga0136551_10347942	3300010388	Pond Fresh Water	MSEGILTIELGRYGFMLDTEWCYVALSWELLATTTLLLIAYKIYKRKKNK*
Ga0133913_113990322	3300010885	Freshwater Lake	MTIELDDYGFMLDTEWCYVALSWQLLITATLLTIGYLVYKRKKNK*
Ga0133913_130787684	3300010885	Freshwater Lake	MTIEIDTYGFMLDTEWAYVAISWQLLITTALLVVAYKVYKWKRGK*
Ga0157137_1053271	3300012286	Freshwater	MSEGILTIELGRYGFMLDTEWCYVALSWELLFTTTLLTIAYKIYKRKKNK*
Ga0157210_10059035	3300012665	Freshwater	MLTIELDSYGFMLDTNWAYIALSWQLLATAVILGVGYKYFKKWKNTNDK*
Ga0138282_11812012	3300012766	Freshwater Lake	MTIELDNYGFMLDTEWAYVALSWQLLITTALLGIAYKFYLVRKAK*
Ga0164293_108507971	3300013004	Freshwater	MSEGFFVIELGRYGFMLDTEWCYVAISWQLIITSALVFAGYKFYKRKKITK*
Ga0170791_154984733	3300013295	Freshwater	TIEIDTYGFMLDTEWAYVALSWQLLITSALLGIAYKFYLVRKAK*
Ga0211732_11759292	3300020141	Freshwater	MTIELDQYGFMLDTEWAYVALSWQLLITTALLVTAYKIYKRKKNK
Ga0211736_103203882	3300020151	Freshwater	MTIELDEYGFMLDTEWAYVALSWQLLITTALLLTAYKIYKRKKNK
Ga0208050_10272331	3300020498	Freshwater	MNEGIFTIEIGSYGFMLDTNWCYIALSWQLIITLSLLTIAYKVY
Ga0208487_10137591	3300020531	Freshwater	MTIEIDTYGFMLDTEWAYVALSWQLLITSALLITAYKIYKIYLKRNGLVGWNY
Ga0207942_100038330	3300020549	Freshwater	MTIELDNYGFMLDTEWCYVALSWQLLITTTLLVTAYKIYKRKKNK
Ga0208852_10500712	3300020560	Freshwater	MSEGFFTIELGRYGFMFDTEWCYVAISWQLIITSALVFAGYKFYKRKKITK
Ga0208597_10253104	3300020562	Freshwater	MKIELDNYGFMLETEWCYVALSWQLLITTALLLTAYKIYKRKKNK
Ga0194060_101460083	3300021602	Anoxic Zone Freshwater	MTLELNGYGLELDTNWCYVALSWQLLITTALLITAYKIYKIKRGK
Ga0222714_101216771	3300021961	Estuarine Water	MSEGIFTIELGRYGFMLDTEWAYVSLSWELLTISALLTIAYKIYKRKKNK
Ga0222713_100987115	3300021962	Estuarine Water	MNEGLLTIELGRYGFMLDTEWCYIALSWELITTSALLTIAYKIYKRKKNK
Ga0214921_103117592	3300023174	Freshwater	MTLELNGYGLELDTNWCYVALSWQLLITSALLITAYKIYKIKRGK
Ga0214919_105969672	3300023184	Freshwater	MTIEIDTYGFMLDTEWAYVALSWQLLITSALLITAYKIYKIKRGK
Ga0244777_100223785	3300024343	Estuarine	MTIELDNYGFMLDTEWCYIALSWQLLITTALLAVGYKYYKKWKTKNVK
Ga0244775_100420347	3300024346	Estuarine	MNEGFFTIEIGSYGFMLDTKWCYIALSWQLIITATLLTIAYKIYKRKKNK
Ga0244776_102391675	3300024348	Estuarine	MKIELDSYGFMFNTEWAYVSLSWELLIVSVLLGVAYKFYKIRKGK
Ga0208009_100407213	3300027114	Deep Subsurface	MSEGFFTIEVDTYGFMLDSAWCYVALSWQLLITTTLLITAYKIYKIRKNK
Ga0255076_10809971	3300027141	Freshwater	FGFMFNTEWAYVSLSWELLIVSVLLGVAYKFYKVRKAK
Ga0209300_10104032	3300027365	Deep Subsurface	MSEGILTIELGRYGFMLDTEWCYIALSWELLAATTLLTIAYKIYKRKKNK
Ga0208682_10194191	3300027531	Estuarine	MTIELDNYGFMLDTEWCYIALSWQLLITAGVIFAGYKAYK
Ga0255088_10719161	3300027597	Freshwater	MKIELDSFGFMFNTEWAYVSLSWELLIVSVLLGVAYKIYK
Ga0208942_10031662	3300027627	Freshwater Lentic	MTIELDTYGFMFDTEWAYVSLSWQLLITSALLGIVYKFYKVRKGK
Ga0208942_10681011	3300027627	Freshwater Lentic	MKIELDSFGFMFNTEWAYVSLSWELLIVSVLLGVAYKFYKVRKGK
Ga0208133_10270622	3300027631	Estuarine	MTIELDNYGFMLDTEWAYVALSWQLLITTALVITAYKIYKIKRGK
Ga0209356_10017112	3300027644	Freshwater Lake	MIIELDTYGFMFDTEWAYVSLSWQLLITSALLGIAYKFYLVRKAK
Ga0209357_10831914	3300027656	Freshwater Lake	MTIEIDTYGFMLDTEWAYVALSWQLLITSALLGIAYKFYLVRKAK
Ga0209551_10185335	3300027689	Freshwater Lake	MKIELDNYGFMLETEWCYVALSWQLLITTALLLTAYKVYKRMRVK
Ga0209599_100023777	3300027710	Deep Subsurface	MSEGFFTIELGRYGFMFDTNWSYVAISWELIIISALVFAGYKFYKRKKITK
Ga0209599_100093164	3300027710	Deep Subsurface	MTIELDDYGFMLDTEWCYVALSWQLLITATLLTIGYLVYKRKKNK
Ga0209087_10824812	3300027734	Freshwater Lake	MTIELDTYGFMLDTEWAYVALSWQLLITSALLGIAYKFYLVRKAK
Ga0209190_12457711	3300027736	Freshwater Lake	XLMKIELDSFGFMFNTEWAYVSLSWELLIASVLLGVAYKFYKIRKAK
Ga0209596_100121731	3300027754	Freshwater Lake	MKIELDSFGFMFNTEWAYVSLSWELLIASVLLGVAYKFYKIRKAK
Ga0209596_100531918	3300027754	Freshwater Lake	MTIELDTYGFMFDTEWAYIALSWQLLITTALVAVAYKAYKKWGNRK
Ga0209596_10377375	3300027754	Freshwater Lake	MTIELDNYGFMLDTEWCYVALSWQLLITTALLITAYKIYKIKRGK
Ga0209444_101563972	3300027756	Freshwater Lake	MKIELDGFGFMFNTEWAYVSLSWELLIASVLLGVAYKFYKIRKGK
Ga0209296_10843022	3300027759	Freshwater Lake	MTIEIDTYGFMLDTEWAYVALSWQLLITTALLITAYKIYKIKRGK
Ga0209598_101447932	3300027760	Freshwater Lake	MTIELGDYGFMLDTEWAYVALSWQLLITSALLGIAYKFYLIRKAK
Ga0209770_103889252	3300027769	Freshwater Lake	MTIELDNYGFMLDTEWCYIALSWQLLATTVLLGVGYKYYKKWKNTNDK
Ga0209086_101688855	3300027770	Freshwater Lake	MTIELDDYGFMFDTEWCYVALSWQLLIITALLAVAYKAYKKWGNRK
Ga0209500_100419944	3300027782	Freshwater Lake	MTIEIDTYGFMLDTEWAYVALSWQLLITTALLITAYKIYKRKKNK
Ga0209500_100644929	3300027782	Freshwater Lake	MTIEIDTYGFMLDTEWAYVALSWQLLITSALLGIAYKVYLVRKAK
Ga0209550_101047481	3300027892	Freshwater Lake	MNEGIFTIELGSYGFMLDTKWCYIALSWQLIITATLLTIGYK
Ga0209550_103954702	3300027892	Freshwater Lake	MTIELDNYGFMLDTEWCYIALSWQLLITAGVIFAGYKAYKKWKTNNDK
Ga0209550_104099242	3300027892	Freshwater Lake	MLSIELDNYGFMLDTEWCYIALSWQLLATAVLLGVGYKYYKKWKNTNDK
Ga0209400_11916603	3300027963	Freshwater Lake	MTIEIDTYGFMLDTEWAYVALSWQLLITTALLGIAYKFYLVRKAK
Ga0209191_11984811	3300027969	Freshwater Lake	DTYGFMLDTEWAYVALSWQLLITSALLITAYKIYKIKRGK
Ga0247723_100849110	3300028025	Deep Subsurface Sediment	MSEGFFTIELGRYGFMLDTEWCYVAISWQLIITSALVFAGYKFYKRKKITK
Ga0247723_10294742	3300028025	Deep Subsurface Sediment	MTIELDTYGFMFDTEWAYIALSWELLITSAVIATAYLAFKKWSNRK
Ga0315899_113185322	3300031784	Freshwater	MSEGILTIELDSYGFMLDTELCYVALSWGLIIPAVILVVAYKIYKRRKGK
Ga0335023_0420109_3_146	3300034050	Freshwater	MTIEIDTYGFMLDTEWAYVALSWQLLITSALLITAYKIYKIYLKRNGL
Ga0335019_0509697_494_631	3300034066	Freshwater	MTIELDNYGFMLDTEWCYVALSWQLLITTALLVTAYKIYKRKKNK
Ga0335027_0003920_1105_1245	3300034101	Freshwater	MIIELDNYGFMLETEWCYVALSWQLLLTTALLITAYKIYKRKKITK
Ga0335027_0337047_782_916	3300034101	Freshwater	MTIEIDTYGFMLDTEWAYVALSWQLLITTALLITAYKIYKRFYK
Ga0335029_0147469_388_543	3300034102	Freshwater	MSEGFFTIELGRYGFMLDTEWCYVAISWQLIITSALVFAGYKFYKRKKISK
Ga0335061_0020810_2280_2417	3300034168	Freshwater	MKIELDNYGFMLETEWCYVALSWQLLITTALLVTAYKIYKRKKNK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063685

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences