Metagenome / Metatranscriptome Family F063674

Basic Information
Family ID	F063674
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	40 residues
Representative Sequence	TQEAAEIAGVGQAAFKSRLHQARLRVRAAIGDEALVTSGG
Number of Associated Samples	110
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.78 %
% of genes near scaffold ends (potentially truncated)	96.90 %
% of genes from short scaffolds (< 2000 bps)	94.57 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Most Common Taxonomy
Group	Bacteria (75.194 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.333 % of family members)
Environment Ontology (ENVO)	Unclassified (38.760 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.961 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.41% β-sheet: 0.00% Coil/Unstructured: 45.59%
Feature Viewer

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Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00903	Glyoxalase	7.75
PF06736	TMEM175	6.20
PF00498	FHA	3.10
PF00106	adh_short	2.33
PF00440	TetR_N	2.33
PF08327	AHSA1	2.33
PF01641	SelR	1.55
PF02922	CBM_48	1.55
PF04229	GrpB	1.55
PF03352	Adenine_glyco	1.55
PF01726	LexA_DNA_bind	1.55
PF12697	Abhydrolase_6	1.55
PF01408	GFO_IDH_MocA	0.78
PF01625	PMSR	0.78
PF12840	HTH_20	0.78
PF09594	GT87	0.78
PF00487	FA_desaturase	0.78
PF07883	Cupin_2	0.78
PF08386	Abhydrolase_4	0.78
PF08734	GYD	0.78
PF13193	AMP-binding_C	0.78
PF03625	DUF302	0.78
PF13490	zf-HC2	0.78
PF00561	Abhydrolase_1	0.78
PF00067	p450	0.78
PF03992	ABM	0.78
PF00378	ECH_1	0.78
PF05015	HigB-like_toxin	0.78
PF13602	ADH_zinc_N_2	0.78
PF00578	AhpC-TSA	0.78
PF08281	Sigma70_r4_2	0.78
PF00583	Acetyltransf_1	0.78
PF00581	Rhodanese	0.78
PF00023	Ank	0.78
PF00196	GerE	0.78
PF13561	adh_short_C2	0.78
PF04248	NTP_transf_9	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG3548	Uncharacterized membrane protein	Function unknown [S]	6.20
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	1.55
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	1.55
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	1.55
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.78
COG2124	Cytochrome P450	Defense mechanisms [V]	0.78
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	0.78
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.78
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	0.78
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.78
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.19 %
Unclassified	root	N/A	24.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.19 %
Unclassified	root	N/A	24.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.19 %
Unclassified	root	N/A	24.81 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	65.12 %
Unclassified	root	N/A	24.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.33 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.78 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.78 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	56.59 %
Unclassified	root	N/A	24.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	37.98 %
Unclassified	root	N/A	24.81 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.78 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.78 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.78 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.81 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	8.53 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	3.88 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.10 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.55 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.55 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.55 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Cryptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales	0.78 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.78 %
Kineosporiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales	0.78 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.78 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.78 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.78 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.81 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	8.53 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3.88 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.55 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.55 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	1.55 %
unclassified Acidimicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales	0.78 %
Cryptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae	0.78 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.78 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.78 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.78 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.78 %
Asticcacaulis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Asticcacaulis	0.78 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	0.78 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.78 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.81 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	8.53 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1.55 %
Catellatospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora	1.55 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1.55 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.55 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.78 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	0.78 %
unclassified Asticcacaulis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Asticcacaulis → unclassified Asticcacaulis	0.78 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.78 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.78 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.78 %
Thermomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	0.78 %
Dactylosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium	0.78 %
Cryptosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium	0.78 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	0.78 %
Quadrisphaera	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Quadrisphaera	0.78 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.78 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.81 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	8.53 %
Nocardia stercoris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia stercoris	1.55 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.55 %
Asticcacaulis sp. AC402	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Asticcacaulis → unclassified Asticcacaulis → Asticcacaulis sp. AC402	0.78 %
Micromonospora ureilytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	0.78 %
Nonomuraea maritima	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea maritima	0.78 %
Desulfobacteraceae bacterium 4484_190.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium 4484_190.3	0.78 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.78 %
unclassified Kribbella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella	0.78 %
unclassified Catellatospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora → unclassified Catellatospora	0.78 %
unclassified Quadrisphaera	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Quadrisphaera → unclassified Quadrisphaera	0.78 %
Cryptosporangium arvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium → Cryptosporangium arvum	0.78 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	0.78 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.78 %
Thermomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	0.78 %
Dactylosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium	0.78 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.78 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.81 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	8.53 %
Nocardia stercoris	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia stercoris	1.55 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.55 %
Kribbella sp. VKM Ac-2571	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2571	0.78 %
Quadrisphaera sp. INWT6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Quadrisphaera → unclassified Quadrisphaera → Quadrisphaera sp. INWT6	0.78 %
Catellatospora sp. TT07R-123	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora → unclassified Catellatospora → Catellatospora sp. TT07R-123	0.78 %
Asticcacaulis sp. AC402	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Asticcacaulis → unclassified Asticcacaulis → Asticcacaulis sp. AC402	0.78 %
Micromonospora ureilytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	0.78 %
Nonomuraea maritima	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea maritima	0.78 %
Desulfobacteraceae bacterium 4484_190.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium 4484_190.3	0.78 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.78 %
Cryptosporangium arvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium → Cryptosporangium arvum	0.78 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	0.78 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.78 %
Thermomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	0.78 %
Dactylosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium	0.78 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.78 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101884051	Not Available	500	Open in IMG/M
3300004080\|Ga0062385_10788551	Not Available	621	Open in IMG/M
3300004479\|Ga0062595_100923698	All Organisms → cellular organisms → Bacteria	739	Open in IMG/M
3300005610\|Ga0070763_10031901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2415	Open in IMG/M
3300005616\|Ga0068852_100517039	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
3300005764\|Ga0066903_107606257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	558	Open in IMG/M
3300005764\|Ga0066903_107970359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300005921\|Ga0070766_10232788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora → unclassified Catellatospora → Catellatospora sp. TT07R-123	1163	Open in IMG/M
3300006028\|Ga0070717_10635622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	969	Open in IMG/M
3300006575\|Ga0074053_11541233	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300006854\|Ga0075425_100405553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1571	Open in IMG/M
3300006893\|Ga0073928_11151687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300009137\|Ga0066709_101296376	Not Available	1068	Open in IMG/M
3300009174\|Ga0105241_12001020	Not Available	570	Open in IMG/M
3300009553\|Ga0105249_11785480	Not Available	688	Open in IMG/M
3300010043\|Ga0126380_10132786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1561	Open in IMG/M
3300010043\|Ga0126380_10141413	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1525	Open in IMG/M
3300010043\|Ga0126380_10595357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	869	Open in IMG/M
3300010047\|Ga0126382_10847959	All Organisms → cellular organisms → Bacteria → Terrabacteria group	784	Open in IMG/M
3300010048\|Ga0126373_11139022	Not Available	846	Open in IMG/M
3300010361\|Ga0126378_12238158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300010361\|Ga0126378_12673824	Not Available	570	Open in IMG/M
3300010366\|Ga0126379_13859918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia stercoris	502	Open in IMG/M
3300010376\|Ga0126381_101170148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1111	Open in IMG/M
3300010396\|Ga0134126_11164328	Not Available	858	Open in IMG/M
3300010864\|Ga0126357_1153896	Not Available	647	Open in IMG/M
3300012200\|Ga0137382_10738370	All Organisms → cellular organisms → Bacteria → Terrabacteria group	706	Open in IMG/M
3300012200\|Ga0137382_11238934	Not Available	529	Open in IMG/M
3300012208\|Ga0137376_11380073	Not Available	595	Open in IMG/M
3300012349\|Ga0137387_10874490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	650	Open in IMG/M
3300012351\|Ga0137386_10348290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Quadrisphaera → unclassified Quadrisphaera → Quadrisphaera sp. INWT6	1066	Open in IMG/M
3300012948\|Ga0126375_11975209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	515	Open in IMG/M
3300012957\|Ga0164303_11400748	Not Available	523	Open in IMG/M
3300012977\|Ga0134087_10658239	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	550	Open in IMG/M
3300013296\|Ga0157374_11869089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → unclassified Kribbella → Kribbella sp. VKM Ac-2571	626	Open in IMG/M
3300014654\|Ga0181525_10134151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea maritima	1360	Open in IMG/M
3300014745\|Ga0157377_10351265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	989	Open in IMG/M
3300016319\|Ga0182033_10734033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	866	Open in IMG/M
3300016357\|Ga0182032_10787956	Not Available	803	Open in IMG/M
3300016371\|Ga0182034_11302963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	634	Open in IMG/M
3300016387\|Ga0182040_11696724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300016404\|Ga0182037_10286220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1319	Open in IMG/M
3300016404\|Ga0182037_10413373	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300016422\|Ga0182039_10274485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1385	Open in IMG/M
3300016422\|Ga0182039_11222896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	679	Open in IMG/M
3300017928\|Ga0187806_1126149	Not Available	832	Open in IMG/M
3300018060\|Ga0187765_10877363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	605	Open in IMG/M
3300020582\|Ga0210395_10207714	Not Available	1469	Open in IMG/M
3300021088\|Ga0210404_10912754	Not Available	502	Open in IMG/M
3300021171\|Ga0210405_11192257	Not Available	564	Open in IMG/M
3300021377\|Ga0213874_10376892	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300021402\|Ga0210385_10175716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1546	Open in IMG/M
3300021403\|Ga0210397_10816980	Not Available	720	Open in IMG/M
3300021432\|Ga0210384_10122036	All Organisms → cellular organisms → Bacteria	2337	Open in IMG/M
3300021474\|Ga0210390_10382578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1190	Open in IMG/M
3300021479\|Ga0210410_10942645	All Organisms → cellular organisms → Bacteria → Terrabacteria group	751	Open in IMG/M
3300021560\|Ga0126371_10732961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1136	Open in IMG/M
3300025905\|Ga0207685_10137647	Not Available	1091	Open in IMG/M
3300025910\|Ga0207684_10454786	Not Available	1099	Open in IMG/M
3300025916\|Ga0207663_10105644	Not Available	1901	Open in IMG/M
3300025939\|Ga0207665_11286171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	583	Open in IMG/M
3300025986\|Ga0207658_12126521	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	510	Open in IMG/M
3300026095\|Ga0207676_12463064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300027787\|Ga0209074_10126308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	895	Open in IMG/M
3300027795\|Ga0209139_10058226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1356	Open in IMG/M
3300027874\|Ga0209465_10690151	Not Available	501	Open in IMG/M
3300028715\|Ga0307313_10173219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	668	Open in IMG/M
3300028781\|Ga0302223_10064987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1222	Open in IMG/M
3300028807\|Ga0307305_10018144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3148	Open in IMG/M
3300030007\|Ga0311338_10440729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	1385	Open in IMG/M
3300030007\|Ga0311338_11036770	Not Available	793	Open in IMG/M
3300030053\|Ga0302177_10103180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Cryptosporangiales → Cryptosporangiaceae → Cryptosporangium → Cryptosporangium arvum	1649	Open in IMG/M
3300030618\|Ga0311354_10224225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1992	Open in IMG/M
3300030706\|Ga0310039_10235054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	711	Open in IMG/M
3300031231\|Ga0170824_111087877	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium 4484_190.3	595	Open in IMG/M
3300031233\|Ga0302307_10215299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	990	Open in IMG/M
3300031234\|Ga0302325_10741636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1402	Open in IMG/M
3300031564\|Ga0318573_10368677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	771	Open in IMG/M
3300031564\|Ga0318573_10780711	All Organisms → cellular organisms → Bacteria → Terrabacteria group	513	Open in IMG/M
3300031679\|Ga0318561_10108986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1462	Open in IMG/M
3300031679\|Ga0318561_10413177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	742	Open in IMG/M
3300031708\|Ga0310686_113899582	Not Available	1026	Open in IMG/M
3300031708\|Ga0310686_119164918	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300031719\|Ga0306917_10668177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	817	Open in IMG/M
3300031744\|Ga0306918_11370563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia stercoris	543	Open in IMG/M
3300031748\|Ga0318492_10255082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	906	Open in IMG/M
3300031764\|Ga0318535_10016223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2783	Open in IMG/M
3300031764\|Ga0318535_10113883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1191	Open in IMG/M
3300031765\|Ga0318554_10171357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1234	Open in IMG/M
3300031765\|Ga0318554_10261155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	986	Open in IMG/M
3300031765\|Ga0318554_10365455	Not Available	820	Open in IMG/M
3300031769\|Ga0318526_10297596	Not Available	660	Open in IMG/M
3300031770\|Ga0318521_10801481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	574	Open in IMG/M
3300031778\|Ga0318498_10336136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	675	Open in IMG/M
3300031779\|Ga0318566_10453645	Not Available	629	Open in IMG/M
3300031795\|Ga0318557_10259513	Not Available	796	Open in IMG/M
3300031799\|Ga0318565_10048725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1961	Open in IMG/M
3300031799\|Ga0318565_10206978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	954	Open in IMG/M
3300031823\|Ga0307478_10223152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1523	Open in IMG/M
3300031835\|Ga0318517_10429114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	597	Open in IMG/M
3300031859\|Ga0318527_10522649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Asticcacaulis → unclassified Asticcacaulis → Asticcacaulis sp. AC402	506	Open in IMG/M
3300031860\|Ga0318495_10104443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1275	Open in IMG/M
3300031890\|Ga0306925_10428492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1415	Open in IMG/M
3300031893\|Ga0318536_10140523	Not Available	1225	Open in IMG/M
3300031893\|Ga0318536_10595214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300031896\|Ga0318551_10127681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium	1375	Open in IMG/M
3300031897\|Ga0318520_10161773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora	1304	Open in IMG/M
3300031897\|Ga0318520_10374404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	867	Open in IMG/M
3300031912\|Ga0306921_11252274	All Organisms → cellular organisms → Bacteria → Terrabacteria group	823	Open in IMG/M
3300031941\|Ga0310912_10632564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	832	Open in IMG/M
3300031945\|Ga0310913_10577257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	798	Open in IMG/M
3300031954\|Ga0306926_10738662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1191	Open in IMG/M
3300032001\|Ga0306922_10972426	All Organisms → cellular organisms → Bacteria → Terrabacteria group	878	Open in IMG/M
3300032039\|Ga0318559_10130664	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1132	Open in IMG/M
3300032039\|Ga0318559_10204895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	907	Open in IMG/M
3300032041\|Ga0318549_10278492	All Organisms → cellular organisms → Bacteria → Terrabacteria group	753	Open in IMG/M
3300032043\|Ga0318556_10546474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	605	Open in IMG/M
3300032044\|Ga0318558_10579659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	561	Open in IMG/M
3300032064\|Ga0318510_10076569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1236	Open in IMG/M
3300032065\|Ga0318513_10531990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	575	Open in IMG/M
3300032067\|Ga0318524_10014550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3408	Open in IMG/M
3300032180\|Ga0307471_102729860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	627	Open in IMG/M
3300032180\|Ga0307471_103646047	Not Available	545	Open in IMG/M
3300032261\|Ga0306920_103628947	Not Available	568	Open in IMG/M
3300032770\|Ga0335085_10593790	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300032828\|Ga0335080_10308283	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300032892\|Ga0335081_10264245	Not Available	2310	Open in IMG/M
3300032895\|Ga0335074_10819783	All Organisms → cellular organisms → Bacteria → Terrabacteria group	864	Open in IMG/M
3300032896\|Ga0335075_10062391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5110	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.02%
Host-Associated	Host-Associated	6.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.15%
Plants	Host-Associated → Plants	6.98%
Aquatic	Environmental → Aquatic	3.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.72%
Peat	Environmental → Terrestrial → Peat	5.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.65%
Freshwater	Environmental → Aquatic → Freshwater	3.10%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.55%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.54%
Loam	Environmental → Terrestrial → Soil → Loam	8.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.55%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.06%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.16%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.43%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.78%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.53%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.33%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.78%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010864	Boreal forest soil eukaryotic communities from Alaska, USA - W3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028781	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063674

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1018840511	3300002245	Forest Soil	AAEIAGVSQAAFKSRLHQARLQVRAAIGDDALATAGG*
Ga0062385_107885511	3300004080	Bog Forest Soil	AAKISGVGEAAFKSRLHHARFKLRASLGDAALTGAAGLR*
Ga0062595_1009236981	3300004479	Soil	EDAAEIAGLGQAAFKSRLHKARLRMREAIGDDALLASGG*
Ga0070763_100319011	3300005610	Soil	VEGLSTQQAAEIVGVGGAAFKSRLHQARLRVRAAIGDGALIDAGR*
Ga0068852_1005170391	3300005616	Corn Rhizosphere	REAAEITGVSEAAFKSRLHQARLKVRAAVGDAALLGIT*
Ga0066903_1076062571	3300005764	Tropical Forest Soil	EIAGVSQAAFKSRLHQARLRVRAAIGDETLVTTGG*
Ga0066903_1079703592	3300005764	Tropical Forest Soil	AAEIAGVSQAAFKSRLHQARLRVRAAIGDEALVTAGG*
Ga0070766_102327881	3300005921	Soil	IAGVGQAAFKSRLHQARLRVRAAIGDQVLATAGG*
Ga0070717_106356221	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	TQEAAEIAGVGQAAFKSRLHQARLRVRAVIGDEVLAASGG*
Ga0074053_115412331	3300006575	Soil	LSTQEAAEIAGVSQAAFKSRLHQARLRVRAAIGDEALVTAGG*
Ga0075425_1004055531	3300006854	Populus Rhizosphere	EAAEITGVSQAAFKSRLHQARLKVRAAVGDAALLGAG*
Ga0073928_111516871	3300006893	Iron-Sulfur Acid Spring	AEIVGVGEAAFKSRLHQARLRVRAAIGDEALIDAGR*
Ga0066709_1012963761	3300009137	Grasslands Soil	AEIAGVGQAAFKSRLHQARLRVRAAIGDDALVTAGG*
Ga0105241_120010201	3300009174	Corn Rhizosphere	EIAGISQAAFKSRLHQARLRVRVAIGDQALVTAGG*
Ga0105249_117854801	3300009553	Switchgrass Rhizosphere	EAAEIAGISQAAFKSRLHQARLRVRVAIGDQALVTAGG*
Ga0126380_101327861	3300010043	Tropical Forest Soil	AAEIAGVSKAAFKSRLHQARLSVRAAVGDEALVTSSG*
Ga0126380_101414134	3300010043	Tropical Forest Soil	EAAEIAGVGQAAFKSRLHQARLRVRAAIGDDALLASGG*
Ga0126380_105953571	3300010043	Tropical Forest Soil	IVGISQAAFKTRLHQARLRARAAIGDQALVTAGG*
Ga0126382_108479592	3300010047	Tropical Forest Soil	IAGVSKAAFKSRLHQARLSVRAAVGDEALVTSSG*
Ga0126373_111390223	3300010048	Tropical Forest Soil	LSTQEAAGIAGISHAAFKSRLHQARLRVRVVIGDQALVTAGG*
Ga0126378_122381582	3300010361	Tropical Forest Soil	AAEIAGISQAAFKTRLHQARLRVRAAIGDEALVSAGA*
Ga0126378_126738241	3300010361	Tropical Forest Soil	LSTQEAAGIAGISHAAFKSRLHQARLRVRVVIGAQALVTSGR*
Ga0126379_138599181	3300010366	Tropical Forest Soil	TQEAAEIAGVGEAAFKSRLHQARLRVRAAIGDEALASTEGEV*
Ga0126381_1011701481	3300010376	Tropical Forest Soil	AEIAGVSQAAFKSRLHQARLRVRAAIGDEALVTAGG*
Ga0134126_111643281	3300010396	Terrestrial Soil	AAEIAGISQAAFKSRLHQARLRVRVAIGDQALVTAGG*
Ga0126357_11538962	3300010864	Boreal Forest Soil	STRESAAIAGVGEAAFKSRLHEARMKVRSALSDAALIAPAG*
Ga0137382_107383702	3300012200	Vadose Zone Soil	EGLSTREAAEIAGVGEAAFKSRLHQARLRVRALVGDAALVASAG*
Ga0137382_112389341	3300012200	Vadose Zone Soil	IAGVGEAAFKSRLHQARLRVRALVGDSALVASAG*
Ga0137376_113800731	3300012208	Vadose Zone Soil	EITGVGQAAFKSRLHQARLRVRAAIGDEALVSSGG*
Ga0137387_108744902	3300012349	Vadose Zone Soil	PQQAAEIAGVSQSAFKSRLHQARLRVRATIGDEMLEHAG*
Ga0137386_103482904	3300012351	Vadose Zone Soil	EGLPTRDAAEIAGIGQAAFKSRLHEARRKLRAALGDKALLSGA*
Ga0126375_119752091	3300012948	Tropical Forest Soil	QEAAEIAGVSQAAFKSRLHQARLRVRAAIGDETLVTTGG*
Ga0164303_114007481	3300012957	Soil	STQEAAEIAGISQAAFKSRLHQARLRVRVAIGDQALVTAGG*
Ga0134087_106582391	3300012977	Grasslands Soil	IAGVGEAAFKSRLHQARLRVRALVGDAALVANAGRAPDPSA*
Ga0157374_118690891	3300013296	Miscanthus Rhizosphere	TQEAAEIVGIGQAALKSRLHQARLRVRAAIGDETLTAIGG*
Ga0181525_101341513	3300014654	Bog	AAVPLTDGGLSTQQAAEIAGVGEAAFKSRLHQARLRVRAAIGDEALIDAGR*
Ga0157377_103512651	3300014745	Miscanthus Rhizosphere	TREAAEITGVSEAAFKSRLHQARLKVRAAVGDAALLGIT*
Ga0182033_107340331	3300016319	Soil	QEAAEIADVGQAAFKSRLHQARLRVRAAIGDEALVTSGG
Ga0182032_107879561	3300016357	Soil	EIAGVGEAAFKSRLHQARLRVRAAIGDEALASTGG
Ga0182034_113029631	3300016371	Soil	QEAAEIAGIGQAAFKSRLHQARLRVRAAVGDQALVSSGG
Ga0182040_116967242	3300016387	Soil	QQAAEIADVGQAAFKSRLHQARHRLRVAIGDEALTGSGW
Ga0182037_102862203	3300016404	Soil	STQEAAEIAGIGQAAFKSRLHQARLRVRAVIGDEALVASGG
Ga0182037_104133731	3300016404	Soil	EAAEAAGIGEAAFKSRLHQARLRVRAAIGDEALASTGG
Ga0182039_102744851	3300016422	Soil	STQEAAEIAGVSQAAFKSRLHQARLRVRAAIGDEVLVTAGG
Ga0182039_112228961	3300016422	Soil	DVEGFSTQEAAEIAGIGQAAFKSRLHQARLRVRAAVTDQALVSSGG
Ga0187806_11261492	3300017928	Freshwater Sediment	DVEGLSTQEAAEIAGVGQAAFKSRLHQARLRVRAAIGDQALVTAR
Ga0187765_108773632	3300018060	Tropical Peatland	LSTQEAAEIAGISQAAFKSRLHQARLRVRAAIGDQALVTAGG
Ga0210395_102077141	3300020582	Soil	EGLSTQEAAEIAGVGQAAFKSRLHQARLRVRAAIGDEALAGSGG
Ga0210404_109127541	3300021088	Soil	TQEAAEIAGISQAAFKSRLHQARLRVRVAIGDQALVTAGG
Ga0210405_111922571	3300021171	Soil	STQEAAEIAGISQAAFKSRLHQARLRVRVAIGDQALVTAGG
Ga0213874_103768921	3300021377	Plant Roots	EAAKIAGLGEAAFKSRLHEARLKVRAALGDDTLIAEERPARG
Ga0210385_101757161	3300021402	Soil	TQQAAEIAGVSQAAFKSRLHQARLQVRAAIGDDALTAVGG
Ga0210397_108169802	3300021403	Soil	DVEGLSTQEAAEIAGVGQAAFKSRLHQARLRVRAAIGDEALAGSGG
Ga0210384_101220364	3300021432	Soil	LSTQEAAEIAGISQAAFKSRLHQARLHVRVAIGDQALVTAGG
Ga0210390_103825781	3300021474	Soil	QAAEIAGVSQAAFKSRLHQARLQVRAAIGDDALTSVGG
Ga0210410_109426451	3300021479	Soil	REAAEIVGVGEAAFKSRLHQARLRVRALVGDSALVASTS
Ga0126371_107329611	3300021560	Tropical Forest Soil	EAAEIAGVGQAAFKSRLHQARLRVRAAIGDQALVASPG
Ga0207685_101376471	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	EIAGISQAAFKSRLHQARLRVRVAIGDQALVTAGG
Ga0207684_104547861	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	EITGVGEAAFKSRLHQARLRVRAAIGDEALASTGG
Ga0207663_101056441	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	GLSTQEAAEIAGVSQAALKSRLHQARLRVRAAIGDEALVTSGG
Ga0207665_112861712	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LSTQEAAEIAGISQAAFKSRLHQARLRVRVAIGDQALVTAGG
Ga0207658_121265212	3300025986	Switchgrass Rhizosphere	REAAEITGVSQAAFKSRLHQARLKVRAAVGDAALLGAG
Ga0207676_124630642	3300026095	Switchgrass Rhizosphere	STREAAEITGVSQAAFKSRLHQARLKVRAAVGDAALLGAG
Ga0209074_101263082	3300027787	Agricultural Soil	AAEITGVSQAAFKSRLHQARLKVRAAVGDAALLGAG
Ga0209139_100582263	3300027795	Bog Forest Soil	STREAAEIAGVGEAAFKSRLHQARLKVRASLGDAALVAAG
Ga0209465_106901511	3300027874	Tropical Forest Soil	AEIAGVSQAAFKSRLHQARLRVRAAVGDEALVTAGG
Ga0307313_101732191	3300028715	Soil	QEAAEIVGIGQAAFKSRLHQARLRVRAAIGDETLTAIGG
Ga0302223_100649871	3300028781	Palsa	VEGLSTQQAAEIAGVGEAAFKSRLHQARLRVRAAIGDEALIDAGR
Ga0307305_100181441	3300028807	Soil	QEAAEIAGISQAAFKSRLHQARLRVRVAIGDQALVTAGG
Ga0311338_104407291	3300030007	Palsa	STREAAKIAGVGEAAFKSRLHQARLKVRAALGDAALIAAPI
Ga0311338_110367702	3300030007	Palsa	KREAANISGVGEAAFKSRLHHARFKVRASLGDAALAGARERR
Ga0302177_101031803	3300030053	Palsa	FSTQEAAEIAGVTPAAFKSRLHQARLQVRAAIGDDALIAVGG
Ga0311354_102242251	3300030618	Palsa	TQEAAEIAGVTPAAFKSRLHQARLQVRAAIGDDALIAVGG
Ga0310039_102350541	3300030706	Peatlands Soil	GLSTQQAAEIVGVGEAAFKSRLHQARLRVRAAIGDEALIDAGR
Ga0170824_1110878772	3300031231	Forest Soil	STQEAAEITGVGEAAFKSRLHQARLRVRAAIGDEALASTGG
Ga0302307_102152991	3300031233	Palsa	TQEAAEIAGVSQAAFKSRLHQARLRVRAAVGDQTLVTTGG
Ga0302325_107416361	3300031234	Palsa	EGLSTREAAKIAGVGEAAFKSRLHQARLKVRAALGDAALIAAAI
Ga0318573_103686772	3300031564	Soil	AAEIAGISQAAFKSRLHQARLRVRVAIGDQALVTAGG
Ga0318573_107807111	3300031564	Soil	EAAEIAGVSQAAFKSRLHQARLRVRAAIGDEALVTAGG
Ga0318561_101089863	3300031679	Soil	LSTQEAAEVTALGQAAFKSRLHQARLRVRAAIGDQALVTAR
Ga0318561_104131771	3300031679	Soil	EAAEIAGIGQAAFKSRLHQARLRVRAAIGDQALVPTG
Ga0310686_1138995821	3300031708	Soil	QAAEIAGVGQAAFKSRLHQARLRVRAAIGDQALIDAGR
Ga0310686_1191649181	3300031708	Soil	TQEAAEIAGVSQAAFKSRLHQARLRVRAAIGDQTLVSTGG
Ga0306917_106681771	3300031719	Soil	EAAEIAGIRQAAFKSRLHQARLRVRAAIGDQTLASTGG
Ga0306918_113705632	3300031744	Soil	LSTQDAAEIAGVGEAAFKSRLHQARLRVRAAIGDEALASTGG
Ga0318492_102550822	3300031748	Soil	TQEAAEVAGIGEAAFKSRLHQARLRVRAAIGDEALASTGG
Ga0318535_100162231	3300031764	Soil	GESLDVTQEAAEIAGISQAAFKSRLHQARLRVRVAIGDQALVTVGG
Ga0318535_101138831	3300031764	Soil	TQEAAEIAGVSQAAFKSRLHQARLRVRAAVGDEALVSSGG
Ga0318554_101713571	3300031765	Soil	TQEAAEIAGLSQAAFKSRLHQARLRVRAAIGDEALVTAGG
Ga0318554_102611551	3300031765	Soil	VEGLSTQEAAEIAGIGQAAFKSRLHQARLRVRAAIGDQALVPTG
Ga0318554_103654551	3300031765	Soil	TQQAAEIAGISQAAFKSRLHQARQRARAAIGDQALVTAGA
Ga0318526_102975962	3300031769	Soil	STQEAAEVTALGQAAFKSRLHQARLRVRAAIGDQALVTAR
Ga0318521_108014811	3300031770	Soil	STQEAAEIAGIGQAAFKSRLHQARLRVRAAIGDQVLASTGG
Ga0318498_103361361	3300031778	Soil	EIAGIRQAAFKSRLHQARLRVRAAIGDQTLASTGG
Ga0318566_104536451	3300031779	Soil	VEGLSTQEAAEIAGIGQAAFKSRLHQARLRVRAAIGDQALVASPG
Ga0318557_102595131	3300031795	Soil	EIAGISQAAFKTRLHQARLRVRVAIGDQALVTAGG
Ga0318565_100487251	3300031799	Soil	VEGLSTQEAAEIAGIGQAAFKSRLHQARLRVRAVIGDEALVASGG
Ga0318565_102069783	3300031799	Soil	AAEIAGIGQAAFKSRLHQARLRVRAAIGDQALVPTG
Ga0307478_102231521	3300031823	Hardwood Forest Soil	EAAEIAGVSQAAFKSRLHQARLRVRAAIGDQALVSTGG
Ga0318517_104291141	3300031835	Soil	STQEAAEIAGIGQAAFKSRLHQARLRVRAAVGDQALVSSGG
Ga0318527_105226492	3300031859	Soil	LSTQEAAEIAGISQAAFKSRLHQARLRARVAIGDQALVTAGG
Ga0318495_101044431	3300031860	Soil	LSTQEAAEIAGVGQAAFKSRLHQARLRVRAAIGDEALVTSGG
Ga0306925_104284921	3300031890	Soil	EAAEVAGIGEAAFKSRLHQARLRVRAAIGDEALASTGG
Ga0318536_101405231	3300031893	Soil	AAEIAGVGEAAFKSRLHQARLRVRAAIGDEALASTGG
Ga0318536_105952141	3300031893	Soil	TQEAAEIAGVGQAAFKSRLHQARLRVRAAIGDEALVTSGG
Ga0318551_101276813	3300031896	Soil	STQEAAEIAGVSQAAFKSRLHQARLRVRATIGDEALVTTGG
Ga0318520_101617732	3300031897	Soil	VEGLSTQQAAEIAGVGLAAFKSRLHQARLRVRAAIGDQALVDASR
Ga0318520_103744041	3300031897	Soil	LSTQEAAQIAGVGEAAFKSRLHQARLRVRAAIGDEALASTGG
Ga0306921_112522742	3300031912	Soil	STQEAAEIAGVSQAAFKSRLHQARLRVRAAIGDETLVTTGG
Ga0310912_106325642	3300031941	Soil	EGLSTQDAAEIAGVGEAAFKSRLHQARLRVRAAIGDEALASTGG
Ga0310913_105772572	3300031945	Soil	AEIAGVGQAAFKSRLHQARLRVRAAIGDEALVTSGG
Ga0306926_107386621	3300031954	Soil	LSTQEAAEIAGIRQAAFKSRLHQARLRVRAAIGDQTLASTGG
Ga0306922_109724262	3300032001	Soil	AEIAGVSQAAFKSRLHQARLRVRAAIGDETLVTTGG
Ga0318559_101306641	3300032039	Soil	TQEAAEIAGVSQAAFKSRLHQARLRVRAAVGDEALVTAGG
Ga0318559_102048952	3300032039	Soil	VEGLSTQEAAEAAGIGEAAFKSRLHQARLRVRAAIGDEALASTGG
Ga0318549_102784922	3300032041	Soil	GFSTQEAAEIAGVSQAAFKSRLHQARLRVRAAVGDEALVTAGG
Ga0318556_105464741	3300032043	Soil	TQEAAEIAGIRQAAFKSRLHQARLRVRAAIGDQTLASTGG
Ga0318558_105796592	3300032044	Soil	TQEAAEIAGVSQAAFKSRLHQARLRVRTAIGDEALVTAGG
Ga0318510_100765691	3300032064	Soil	GLSTQEAAEIAGVGQAAFKSRLHQARLRVRAAIGDEALVTSGG
Ga0318513_105319901	3300032065	Soil	AAEIAGVSQAAFKSRLHQARLRVRTAIGDEALVTAGG
Ga0318524_100145501	3300032067	Soil	VEGLSTQEAAEIAGVGQAAFKSRLHQARLRVRAAIGDEALVTSGG
Ga0307471_1027298602	3300032180	Hardwood Forest Soil	TREAAEIAGVGEAAFKSRLHQARLTVRALVGDAALAASAG
Ga0307471_1036460471	3300032180	Hardwood Forest Soil	VEGLSTQEAAEVAGVGQAAFKSRLHQARLRVRAAVGDEALVSSGG
Ga0306920_1036289472	3300032261	Soil	EAAEVTALGQAAFKSRLHQARLRVRAAIGDQALVTAR
Ga0335085_105937902	3300032770	Soil	MPRACGDVEGLSTHEPAEITGIGQAAFKSRRHQARLRVRAVIGDQALGTASG
Ga0335080_103082831	3300032828	Soil	GLSTQEAAEIAGVSQAAFKSRLHQARLRARAAIGDETLVTSGG
Ga0335081_102642451	3300032892	Soil	QEAAEIVGISQAAFKSRLHQARLRVRAAIGDAALITAGA
Ga0335074_108197831	3300032895	Soil	AEIAGVSPAAFKSRLHQARLQVRAAIGDDALVPAGR
Ga0335075_100623915	3300032896	Soil	VKAGIGHAAFKSRLQQARLLIRAAAGDQALINVGQLY

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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