Metagenome / Metatranscriptome Family F063664

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063664
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	91 residues
Representative Sequence	RYVPSEQVDEITEGTVRLSLTPAQVERLVEYLEPATSAQIEPDSKGGVGESLGAEARELEGKAFAPTQRHEHSMNIWRRIAFFFRRLFS
Number of Associated Samples	114
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.55 %
% of genes near scaffold ends (potentially truncated)	98.45 %
% of genes from short scaffolds (< 2000 bps)	93.02 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.798 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (21.705 % of family members)
Environment Ontology (ENVO)	Unclassified (35.659 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.690 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.95% β-sheet: 7.69% Coil/Unstructured: 74.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00221	Lyase_aromatic	29.46
PF02575	YbaB_DNA_bd	6.98
PF04545	Sigma70_r4	6.20
PF13517	FG-GAP_3	2.33
PF00903	Glyoxalase	1.55
PF00664	ABC_membrane	1.55
PF13673	Acetyltransf_10	0.78
PF13365	Trypsin_2	0.78
PF01175	Urocanase	0.78
PF12169	DNA_pol3_gamma3	0.78
PF07676	PD40	0.78
PF12681	Glyoxalase_2	0.78
PF00246	Peptidase_M14	0.78
PF07726	AAA_3	0.78
PF01139	RtcB	0.78
PF02146	SIR2	0.78
PF00476	DNA_pol_A	0.78
PF01551	Peptidase_M23	0.78
PF02782	FGGY_C	0.78
PF11941	DUF3459	0.78
PF06348	DUF1059	0.78
PF01850	PIN	0.78
PF13177	DNA_pol3_delta2	0.78
PF01609	DDE_Tnp_1	0.78
PF02311	AraC_binding	0.78
PF01522	Polysacc_deac_1	0.78
PF13489	Methyltransf_23	0.78
PF00196	GerE	0.78
PF12847	Methyltransf_18	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG2986	Histidine ammonia-lyase	Amino acid transport and metabolism [E]	29.46
COG0718	DNA-binding nucleoid-associated protein YbaB/EfbC	Transcription [K]	6.98
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.78
COG0846	NAD-dependent protein deacetylase, SIR2 family	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	0.78
COG2987	Urocanate hydratase	Amino acid transport and metabolism [E]	0.78
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.78
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.78
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.78
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.78
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.78
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.80 %
Unclassified	root	N/A	6.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.80 %
Unclassified	root	N/A	6.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.80 %
Unclassified	root	N/A	6.20 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	89.92 %
Unclassified	root	N/A	6.20 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	89.15 %
Unclassified	root	N/A	6.20 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	36.43 %
Unclassified	root	N/A	6.20 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	34.11 %
Unclassified	root	N/A	6.20 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	34.11 %
Unclassified	root	N/A	6.20 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000837\|AP72_2010_repI_A100DRAFT_1029335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
3300002568\|C688J35102_117728112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300004480\|Ga0062592_100217447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1366	Open in IMG/M
3300004480\|Ga0062592_102043951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300005165\|Ga0066869_10021689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	974	Open in IMG/M
3300005175\|Ga0066673_10329147	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300005178\|Ga0066688_10055191	All Organisms → cellular organisms → Bacteria	2312	Open in IMG/M
3300005178\|Ga0066688_10842834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	570	Open in IMG/M
3300005187\|Ga0066675_11147407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300005446\|Ga0066686_10467863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	860	Open in IMG/M
3300005450\|Ga0066682_10366992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	926	Open in IMG/M
3300005451\|Ga0066681_10622563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	663	Open in IMG/M
3300005454\|Ga0066687_10311042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	895	Open in IMG/M
3300005467\|Ga0070706_100716428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	928	Open in IMG/M
3300005471\|Ga0070698_100320911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1479	Open in IMG/M
3300005471\|Ga0070698_101254157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	691	Open in IMG/M
3300005540\|Ga0066697_10159270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1335	Open in IMG/M
3300005542\|Ga0070732_10030571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3064	Open in IMG/M
3300005552\|Ga0066701_10539035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300005553\|Ga0066695_10233591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1159	Open in IMG/M
3300005556\|Ga0066707_10306561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1039	Open in IMG/M
3300005559\|Ga0066700_10731167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	675	Open in IMG/M
3300005560\|Ga0066670_10044649	All Organisms → cellular organisms → Bacteria	2262	Open in IMG/M
3300005560\|Ga0066670_10166122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1302	Open in IMG/M
3300005560\|Ga0066670_10860368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300005575\|Ga0066702_10276794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1024	Open in IMG/M
3300005576\|Ga0066708_10147606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1443	Open in IMG/M
3300005598\|Ga0066706_11190370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300005901\|Ga0075274_1031535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	760	Open in IMG/M
3300006031\|Ga0066651_10442933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300006032\|Ga0066696_10079739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1919	Open in IMG/M
3300006032\|Ga0066696_10388236	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300006034\|Ga0066656_10802883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	603	Open in IMG/M
3300006034\|Ga0066656_10994472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300006057\|Ga0075026_100301657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300006605\|Ga0074057_11761833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	530	Open in IMG/M
3300006794\|Ga0066658_10521452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300006845\|Ga0075421_100002166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23300	Open in IMG/M
3300006854\|Ga0075425_100422978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1534	Open in IMG/M
3300006871\|Ga0075434_100320158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1571	Open in IMG/M
3300006903\|Ga0075426_10157084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1641	Open in IMG/M
3300006953\|Ga0074063_13889434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	523	Open in IMG/M
3300009012\|Ga0066710_100342869	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2206	Open in IMG/M
3300009012\|Ga0066710_100559528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1731	Open in IMG/M
3300009012\|Ga0066710_102366938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
3300009137\|Ga0066709_102778482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300009162\|Ga0075423_10460155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1337	Open in IMG/M
3300009662\|Ga0105856_1101507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	840	Open in IMG/M
3300010043\|Ga0126380_10111864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1665	Open in IMG/M
3300010303\|Ga0134082_10346499	Not Available	629	Open in IMG/M
3300010323\|Ga0134086_10220306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	714	Open in IMG/M
3300010326\|Ga0134065_10031386	Not Available	1560	Open in IMG/M
3300010326\|Ga0134065_10192891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	734	Open in IMG/M
3300010336\|Ga0134071_10698373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300010337\|Ga0134062_10365685	Not Available	698	Open in IMG/M
3300010359\|Ga0126376_13170325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300010360\|Ga0126372_11914586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300010398\|Ga0126383_13338097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300011106\|Ga0151489_1250532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	638	Open in IMG/M
3300011119\|Ga0105246_11724354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300012198\|Ga0137364_10972772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	642	Open in IMG/M
3300012204\|Ga0137374_10465042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	990	Open in IMG/M
3300012349\|Ga0137387_10978894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300012350\|Ga0137372_10269230	Not Available	1332	Open in IMG/M
3300012350\|Ga0137372_10490626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	915	Open in IMG/M
3300012353\|Ga0137367_10900816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	609	Open in IMG/M
3300012355\|Ga0137369_10148201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1866	Open in IMG/M
3300012355\|Ga0137369_10755687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	665	Open in IMG/M
3300012357\|Ga0137384_11284870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300012357\|Ga0137384_11350903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300012360\|Ga0137375_10791912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	763	Open in IMG/M
3300012361\|Ga0137360_10611852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	933	Open in IMG/M
3300012683\|Ga0137398_11075465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300012896\|Ga0157303_10233926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	551	Open in IMG/M
3300012922\|Ga0137394_10281390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1422	Open in IMG/M
3300012930\|Ga0137407_12322674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300012960\|Ga0164301_10212745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1242	Open in IMG/M
3300012977\|Ga0134087_10154732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1000	Open in IMG/M
3300013832\|Ga0120132_1096920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	616	Open in IMG/M
3300014058\|Ga0120149_1206134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	550	Open in IMG/M
3300014150\|Ga0134081_10106338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	888	Open in IMG/M
3300014498\|Ga0182019_10385683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	952	Open in IMG/M
3300015077\|Ga0173483_11003730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500	Open in IMG/M
3300015358\|Ga0134089_10404551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	584	Open in IMG/M
3300015359\|Ga0134085_10549445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300015374\|Ga0132255_104672005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300017944\|Ga0187786_10298627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	660	Open in IMG/M
3300017994\|Ga0187822_10360464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300018061\|Ga0184619_10127873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1153	Open in IMG/M
3300018431\|Ga0066655_10370416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	943	Open in IMG/M
3300018433\|Ga0066667_12306596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300019362\|Ga0173479_10248940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	780	Open in IMG/M
3300019887\|Ga0193729_1261845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300020081\|Ga0206354_10273801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	834	Open in IMG/M
3300025910\|Ga0207684_11562334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300025916\|Ga0207663_10194961	Not Available	1457	Open in IMG/M
3300025922\|Ga0207646_11936616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300026022\|Ga0208649_1008517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	829	Open in IMG/M
3300026300\|Ga0209027_1109063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	981	Open in IMG/M
3300026312\|Ga0209153_1001140	All Organisms → cellular organisms → Bacteria	9651	Open in IMG/M
3300026312\|Ga0209153_1304087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511	Open in IMG/M
3300026342\|Ga0209057_1156508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300026450\|Ga0247847_1025407	Not Available	788	Open in IMG/M
3300026475\|Ga0257147_1047908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300026548\|Ga0209161_10127265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1498	Open in IMG/M
3300027562\|Ga0209735_1138653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300027882\|Ga0209590_11037151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300028577\|Ga0265318_10049999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1572	Open in IMG/M
3300028654\|Ga0265322_10033282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1470	Open in IMG/M
3300028666\|Ga0265336_10004119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5538	Open in IMG/M
3300028718\|Ga0307307_10212008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	614	Open in IMG/M
3300028719\|Ga0307301_10061895	Not Available	1161	Open in IMG/M
3300028784\|Ga0307282_10229574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	890	Open in IMG/M
3300028791\|Ga0307290_10016604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2533	Open in IMG/M
3300028799\|Ga0307284_10064045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1319	Open in IMG/M
3300028875\|Ga0307289_10127088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1045	Open in IMG/M
3300031231\|Ga0170824_111756523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	731	Open in IMG/M
3300031241\|Ga0265325_10504269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300031251\|Ga0265327_10222826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	848	Open in IMG/M
3300031562\|Ga0310886_10129973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1299	Open in IMG/M
3300031564\|Ga0318573_10778733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	514	Open in IMG/M
3300031595\|Ga0265313_10341753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	594	Open in IMG/M
3300031805\|Ga0318497_10814352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300031896\|Ga0318551_10079476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1715	Open in IMG/M
3300032068\|Ga0318553_10366907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	754	Open in IMG/M
3300032829\|Ga0335070_10857260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	843	Open in IMG/M
3300032829\|Ga0335070_11747869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300032893\|Ga0335069_10125266	Not Available	3212	Open in IMG/M
3300034268\|Ga0372943_1148266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.92%
Host-Associated	Host-Associated	10.08%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.60%
Plants	Host-Associated → Plants	10.08%
Aquatic	Environmental → Aquatic	2.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.30%
Sediment	Environmental → Aquatic → Sediment	1.55%
Freshwater	Environmental → Aquatic → Freshwater	0.78%
Peat	Environmental → Terrestrial → Peat	0.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.64%
Loam	Environmental → Terrestrial → Soil → Loam	6.98%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	27.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.55%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.55%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	21.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.53%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	4.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.10%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.55%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.55%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.78%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005901	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_201	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026022	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_201 (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026450	Peat soil microbial communities from Stordalen Mire, Sweden - P.F.S.T25	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027562	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300028654	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG	Host-Associated	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A100DRAFT_10293351	3300000837	Forest Soil	KPRYVPAEQVAEITEGTVRLALTREQVEQLGEYREPATTARIEPDSHXGAGEAVAAEARELEGKVVAPTQRHEHSMNIWRRIAFFFRRLFR*
C688J35102_1177281122	3300002568	Soil	QVAEITEGVVRLSLSAEQSAALGEYREPATSLSVEPDSKGGAREAVSAEARELESDVVAPIQSHEHSMNIFRRIAFWFRRRRGR*
Ga0062592_1002174474	3300004480	Soil	FLEPATTAQIEADSRGGFGAELGADVRELEGKAVAPIQRHEHRMNIWRRTALFFRRLFS*
Ga0062592_1020439511	3300004480	Soil	IFDGLAIATSRFGKPRYVPSEQVDEITEGTVRLSLTPAQVERLVEYLEPATSAQIEPDSKGGVGATLGADARELEGKAFAPTQRHEHSMNIWRRIAFFFRRLFS*
Ga0066869_100216894	3300005165	Soil	AKPKYVPAEKVTTITDGHVNLSLTREEVESAGEFLEPATSAEIEPSDHHGIGESIGAETRKLEGKAFAPTQRHEHSMNIWRRIAFYFRRLFS*
Ga0066673_103291471	3300005175	Soil	AERVARITDGTVHLALTHDAFAALGEYLEPATSSEIEPDDRGGLGESIGAEAREIEGRALTPTQRREHSMNVWRRIYFFVRRLLARE*
Ga0066688_100551911	3300005178	Soil	GISEGVVRLSLTRVQVMQLGEYLEPATSAEIEPDSKGGLGETLAADAREVEAKVLAPIQRHEHPMNVWRRIAFFFRRLAG*
Ga0066688_108428341	3300005178	Soil	IFDGLAIATSSFGRPRYVPAEQVAGISQGVVRLSLTGEQVAGLGEYLEPATSAEIEPESKGGLGETLAADVREVEARVLAPTQRHEHSMNIWRRIAFFFRRLAG*
Ga0066675_111474071	3300005187	Soil	EGTVRLSLTLAQVDQLGEYLEPATSAQIEPNSKGGIGESLSSEARELEGKAFAPTQDQEHSMNIWRRIAFFFRRLFS*
Ga0066686_104678632	3300005446	Soil	TEGTVRLSLTTAQVEQLGQYLEPATSAQIEPNSKGSIGESLSADARELEGKVLAPTQRHEHSMNLWRRIAFFFRRLFG*
Ga0066682_103669921	3300005450	Soil	SEQVAEITEGTVRLALTREQVEQLGEYREPATSARIEPDSRGGAGEALSAEARELEGKVVAPTQRHEHSMNIWRRIAFFFRRLFR*
Ga0066681_106225631	3300005451	Soil	SEQVAEITEGTVRLALTREQVEHLGEYREPATSARIEPDSRGGAGEAVSGEVRELEGKVVAPTQRQEHSMNIWRRIAFFFRRLFR*
Ga0066687_103110422	3300005454	Soil	VPSEQVAEITEGTVALSLTPAQVEQLREYLEPATSAQIEPNSKGGIGESLSADARELEGKVFAPTQRQQHSMNLWRRIAYFFRRLFR*
Ga0070706_1007164282	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	DEITEGTVRLSLTPAQVDQLGEYLEPATSAQIEPNSKGGMGESVRAEARELEGKAFAPTQRQEHSMNIWRRIAFFFRRLFS*
Ga0070698_1003209112	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	SEQVDEIIDGTVRLSLTAAQVEQLGEYLEPATSAQIEPNSKGGIGESLSADARELEGKVLAPTQRHEHSMSIWRRIAFFFRRLFG*
Ga0070698_1012541571	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	EGTIRLSLTPEQVEQLSEYLEPATSAEIEPDSKGGIGESIGSELRHVEGELFAPTQRHEHPMNMWRRIAFFFRRLRR*
Ga0066697_101592701	3300005540	Soil	AIATTRFGKPRYVPSEQVAEITEGTVRLSLTTAQVEQLGQYLEPATSAQIEPNSKGSIGESLSADARELEGKVLAPTQRHEHSMNLWRRIAFFFRRLFG*
Ga0070732_100305711	3300005542	Surface Soil	IATSAFGKPRYVPSEQVGQIFEGEVHLTLSREQAEKLDEYLEPATSAEIEPDSRNRLSADVRELEAKAFAPIETREHSMNIYRRIAFFFRRLFK*
Ga0066701_105390351	3300005552	Soil	PRYVPAEQVAGISQGLVRLSLTREQVAQLGEYLEPATSAEIEPDSKGGLSETLAADARELEAKVLAPTQRHEHSMNIWRRIAFFVRRLAG*
Ga0066695_102335911	3300005553	Soil	IFDGLAIATSRFGKPRYVPSEQVDEITEGTVRLSLTLAQVDQLGEYLEPATSAQIEPNSKGGIGESLSSEARELEGKAFAPTQDQEHSMNIWRRIAFFFRRLFS*
Ga0066707_103065611	3300005556	Soil	DDTQDVFDGLAVATSAFGKPRYVLSEQVGLITQGVVHLTIDRTQVEQLGEYLEPATSAEIQADSKGGPGETIGADIREIEAKEFAPIQRHEHSMNIWRRIAFFFRRKRG*
Ga0066700_107311671	3300005559	Soil	VPAEQVGEITEGTVRLDLTREQVDQLSEYLEPATTAEIESDGKGGFGETVRADARELEGKVFAPTQKREHSMNIWRRIAFFFRRFFRR*
Ga0066670_100446491	3300005560	Soil	PSEQVAEITEGTVALSLTPAQVEQLREYLEPATSAQIEPNSKGGIGESLSADARELEGKVFAPTQRQQHSMNLWRRIAYFFRRLFR*
Ga0066670_101661224	3300005560	Soil	DGTVHLALTHDAFAALGEYLEPATSSEIEPDDRGGLGESIGAEAREIEGRVLAPTQHREHSMNVWRRIYFFVRRLLARE*
Ga0066670_108603681	3300005560	Soil	GKPRYVPAEQVAEITEGTVRLKLTKEQVDQLGEYLEPATSAEIEGDNRAGLGASVGAEARELEGKVFAPTQKREHSMNLWRRIAFFFRRLFSR*
Ga0066702_102767944	3300005575	Soil	ITEGRVNLSLTRDEVEASDEFLEPATTAEIEPDSRGGLGEQLGADVRELEGKAVAPVQRHEHRMNVWRRIAFFFRRLFARD*
Ga0066708_101476061	3300005576	Soil	SEQVAEITEGTVALSLTPAQVEQLREYLEPATSAQIEPNSKGGIGESLSADARELEGKVFAPTQRQQHSMNLWRRIAYFFRRLFG*
Ga0066706_111903702	3300005598	Soil	AFGKPRYVPAEQVGQITDGVVHLTLTPAEVEQLGEYLEPATSAEIEPESKGGVGETLAAEARELEGEAFAPIQRHEHSMNVWRRIAFFFRRRVR*
Ga0075274_10315351	3300005901	Rice Paddy Soil	EQVGRIEEGAVRLTITREQAEALGEYREPATSAEIEPDSKGGAGEAIASDVREVEAKAFAPIERHEHPMNVWRRIAFFFRRMVR*
Ga0066651_104429331	3300006031	Soil	SMFGKPRYVPSEQVAEITEGTVRLALTREQVEQLGEYREPATSARIEPDSRGGAGEALSAEARELEGKVVAPTQRHEHSMNIWRRIAFFFRRLLR*
Ga0066696_100797391	3300006032	Soil	TRGEVEASDEFLEPATTAEIEPDSRGGLGEQFGADIRELEGKAAAPVQRHEHRMNVWRRVAFFFRRFFARD*
Ga0066696_103882363	3300006032	Soil	KPRYVPAEQVAEITDGAVRLSLTREQVESLPEYLEPATTLEVEPDSKGGFGERLAADVREVESDVFAPVQRHEHPMNFWRRLAFFFRRLVK*
Ga0066656_108028832	3300006034	Soil	HGVVRLSLTREQVAKLDEYLEPPTSAQIEPESESGFGERLASDAREVEGKLVAPTQRHEHSMNVWRRLAFFFRRLRR*
Ga0066656_109944721	3300006034	Soil	GKPRYVPSEQVAEITEGAVRLSLTRAQIEQLSEYREPATSAQIEPDSKGGIGESLSADARELEGKALAPTQRREHSMNIWRRIAFFFRRLFG*
Ga0075026_1003016571	3300006057	Watersheds	PRYVLSEQVGTITDGVVHLTIRKAQFDQLGEYLEPATSAEIEPGKGGLGATLGADVREIESNVAAPIQRHEHSMGLGERISLFFARRKR*
Ga0074057_117618331	3300006605	Soil	AIATSALGKPRYVAAEQVAEIKDGAVRLSLTREQVGQLGEYLEPAMSAEIEPDSKSGIGESVGAEIRKVEGEVFAPTQRHEHSMSIWRRIGFFFRRRGARPRGLM*
Ga0066658_105214521	3300006794	Soil	GKPRYRPAEQVAEITEGTVRLSLTPAQVEQLREYLEPATSAQIEPNNKGSIGESLSADARELEGKALAPTQRHEHSMNIWRRIAFFFRRLFG*
Ga0075421_10000216627	3300006845	Populus Rhizosphere	GLAIATSMLGKPRYVPSEQVAEIVEGTVRLALTREQVEHLGEYREPATSARIEPDSRAGAGEAISAEARKLEGKAVAPTQRHEHSMNIWRRIAFFFRRLFR*
Ga0075425_1004229782	3300006854	Populus Rhizosphere	LGKPRYVPAEQVGEMTEGTVWLNLTPTQVEQLGEYLEPATSAEIEADNKGGMAESVRAEARELEGKALAPTQKREHSMNIWRRTAFFFRRLFRR*
Ga0075434_1003201582	3300006871	Populus Rhizosphere	AIATSRFGKPRYVPSEQVDEITEGTVRLSLTPAQVERLVEYLEPATSAQIEPDSKGGVGETLGAEARELEGKAFAPTQRHEHSMNIWRRIAFFFRRLFS*
Ga0075426_101570842	3300006903	Populus Rhizosphere	ATSRFGKPRYVPSEQVDEITEGTVRLSLTPAQVERLVEYLEPATSAQIEPDSKGGVGETLGAEARELEGKAFAPTQRHEHSMNIWRRIAFFFRRLFS*
Ga0074063_138894341	3300006953	Soil	IATSALGKPRYVSAEQVAEITDGSVRLSLTPDQVAELGEYLEPATSAVIEPDSKGGAGQTLRADAREVEAKVVAPIAKHEQSMSIWRRIAFFFKRL*
Ga0066710_1003428691	3300009012	Grasslands Soil	VPAEQVAGISQGLVRLSLTREQVAQLGEYVEAATSAEIEPDSKGGLSETLAADARELEAKVLAPTQRHDHSMNIWRRIAFFVRRLAG
Ga0066710_1005595284	3300009012	Grasslands Soil	IATSSFGKPRYVPAEQVAGISEGAVRLSLTRDQVMQLGEYLEPATSAEIEPDSKGGFGEALSADVREVEARVLAPTQRHEHPMNLWRRIAFFFRRLAG
Ga0066710_1023669382	3300009012	Grasslands Soil	VPAEQVAGISEGAVRLSLTRDQVVQLGEYLEPATSAEIEPDSKGGLGETLAADVREVEAKVLAPTQRHEHSMNIWRRIAFFFRRLAG
Ga0066709_1027784821	3300009137	Grasslands Soil	VPAEQVGEITEGTVRLSLTREQVGRLGEYLEPATSAEIEPDSKGGFGESVASEAREVEGKVFAPTQRHEHSMNIWRRIAFVFRRLFSR*
Ga0075423_104601554	3300009162	Populus Rhizosphere	GKPRYVPAEQVGEITEGTVRLNLTPTQVEQLGEYLEPATSAEIEADNKGGMRESVRAEARELEGKALAPTQKREHSMNIWRRTAFFFRRLFRG*
Ga0105856_11015071	3300009662	Permafrost Soil	QVGVITDGVVHLTIDQAQAEQLGEYLEPATSAEIEPESKGGFGETLHGDIREVEARVVAPTEQHEHSMNAWRRIAFFFRRRMR*
Ga0126380_101118641	3300010043	Tropical Forest Soil	MFCKPRYVPSEQVAGITDGTVRLALTREQVERLGEYREPATSARIEPDSRAGAGEALSAEARELEGKVVAPTQRHEHSMNIWRRIAFFFRRLFR*
Ga0134082_103464991	3300010303	Grasslands Soil	EQVGQITDGVVHLTLTRAQAEQLGEYLEPATSAEIEPDSKGGAGEALAADARELGGKVFAPIQRHEHPMNVWRRLAFFFRRLVR*
Ga0134086_102203061	3300010323	Grasslands Soil	ATSMFGKPRYVPSEQVAEITEGTVRLALTREQVVHLGEYREPATSARIEPDSRGGAGEALCAEVRELEGKVVAPTQRQEHSMNIWRRIAFFFRRLFR*
Ga0134065_100313861	3300010326	Grasslands Soil	EGTVRLALTRKQVEQLGEYREPATSARIEPDSRGGAGEALSAEVRELEGKVVAPTQRHEHSMNIWRRIAIFFRRLFR*
Ga0134065_101928911	3300010326	Grasslands Soil	IFDGLAIATSALGKLRYVPAEQVVEITDGAVRLSLTREQVEALPEYLEPATTAEIEPDSKGGVGEALAAEARELEGKAFAPIQRHEHPMNVWRRLAFFFRRLVR*
Ga0134071_106983731	3300010336	Grasslands Soil	AGDDTQDVFDGLAVATSAFGKPRYVLSEQVGLITQGVVHLTIDRTQVEQLGEYLEPATSAEIQADSKGGLGETIGADIREIEAKEFAPIQRHEHSMNIWRRIAFFFRRKRG*
Ga0134062_103656851	3300010337	Grasslands Soil	ITDGAVRLSLTREQVEALPEYLEPATTLEVEPDSKGGFGESLAADVREVESEVVAPIQRHEHPMNLWRRLAFFFRRLVK*
Ga0126376_131703251	3300010359	Tropical Forest Soil	KYVPAERVTTITEGRINLSLTSDEVESADEFLEPATTAEIEPDSRGGVGAELGADARELEGKAVAPIQRHEHRMNIWRRTAFFFRRLFG*
Ga0126372_119145862	3300010360	Tropical Forest Soil	ATSMFGKPRYVPSEQVAEITEGRVRLALTRAQVEQLGEYREPATSARIEPDSRAGAGEAISAEARELEGKVVAPTQRHEHSMNIWRRIAFFFRRLFR*
Ga0126383_133380971	3300010398	Tropical Forest Soil	DIFDRLAVATSALGKPRYVPSEQVGEITEGIVRLKLAEADAVRLGEYLEPATSAVIEPDDKGGFGEKIGADVRDVEAKVLAPTQRHEHSMNVWRRMTFWLERTLRRS*
Ga0151489_12505322	3300011106	Soil	ATSALAKPKYVPAEKVTTITDGHVNLSLTREEVESAGEFLEPATSAEIEPSDHHGIGESIGAETRKLEGKAFAPTQRHEHSMNIWRRIAFYFRRLFS*
Ga0105246_117243541	3300011119	Miscanthus Rhizosphere	RFGKPRYVPSEQVDEITEGTVRLSLTPAQVERLVEYLEPATSAQIEPDSKGGVGESLGAEARELEGKAFAPTQRHEHSMNIWRRIAFFFRRLFS*
Ga0137364_109727722	3300012198	Vadose Zone Soil	GLAIATSRFGKPRYVPSEQVDEITEGTVRLSLTPAEVDQLGEYLEPATSAQIEPNSKGGIGESLSSEARELEGKAFAPTQPHEHSMNIWRRIAFFFRRLFS*
Ga0137374_104650421	3300012204	Vadose Zone Soil	KPRYVPAEQVAEITQGAMRLSLTREQVAQLGEYLEPATSAEIQPDSRGGIGESLGAEIREVEGDIFAQTQRHEHPMNIWRRIAFFFRRRAG*
Ga0137387_109788941	3300012349	Vadose Zone Soil	LGKPRYVPAEQIAELTQGAVRLSLTREQVAQLGEYLEPATSAEIEPDSRGGIGESLGAEIREVEGKVLAPTQRHEHSMNIWRRIAFFFRRLTG*
Ga0137372_102692301	3300012350	Vadose Zone Soil	ATWRRRTSARSQRESCVSRLSLTREQVEQLSEYREPATSAQIEPNSKGGPGESLSAEAREVEGKAVAPTQRHEHSMNVWRRIAFFFRRLFG*
Ga0137372_104906262	3300012350	Vadose Zone Soil	FGKPRYVPSERVAEITEGAVRLSLTREQVERLAEYLEPATSAEIEPDSKGGIGESLSSEGRKLEGKVLAPTQRHEHSMNVWRRIAFFFRHLFR*
Ga0137367_109008161	3300012353	Vadose Zone Soil	EETTGDSTHDIFDGISIAPGVFGTARYVPSEQVGEITDGIVHVSLTPAQVEALDEYLEPATSAEIEPDSRGGVGEAFAAELREVEGEAFAPIQRHEHSMNVWRRIAFFFRRLSR*
Ga0137369_101482011	3300012355	Vadose Zone Soil	QPRYVPAEQVAEISQGVVRLSLTREQVMQLGEYLEPATSAKIEPDSKGGVGETLAADLREVEAKVLAPTQRHEHSMNAWRRIAFFFRRLGG*
Ga0137369_107556872	3300012355	Vadose Zone Soil	FDGLAIATSALGKPRYVPAEQVAEITQGAVRLSLTEEQVRQLGEYLEPATSAEITPDTKGGIGASIGAEMREIEGEVFAPTQRHEHSMNIWRRIAFFLRRRAR*
Ga0137384_112848701	3300012357	Vadose Zone Soil	GKPRYVPSEQVAEITEEAVRLSLTPEQVEQLSEYREPATTAQIEPDSKGGMGESLRGEARELENKVLAPTQRREHSVNIWRRIAFFFRRLFG*
Ga0137384_113509031	3300012357	Vadose Zone Soil	VVRLSLTREQVVQLNEYLEPATSAEIEPDSKGGLGETLAADVREVEGKVLAPIQRHEHSMNIWRRIAFFFRRLAG*
Ga0137375_107919121	3300012360	Vadose Zone Soil	GLAIATSALGKPRYVPAEQVAEITQGAVRLSLTEEQVRQLGEYLEPATSAEITPDSKGGIGESVGAEMREIEGEVFAPTQRHEHSMNIWRRIAFFLRRRAR*
Ga0137360_106118522	3300012361	Vadose Zone Soil	EEITEGAVRLSLSREQIEQLGEFLEPATSAEIEPDSKGGIGESLSSEGRKLEGKVLAPTQRHEHSMNVWRRIAFFFRRLFR*
Ga0137398_110754652	3300012683	Vadose Zone Soil	ITDGSVRLSLTREQVEQLGEYLEPATSAEIEPDSKGGLGESLGAEVRELEGDVLAPTQRHEHSMNIWRRIAFFVRRLVS*
Ga0157303_102339261	3300012896	Soil	VVATSALGRPKYVPAERVTTITEGRVDLSLAPDQVEAADEFLEPATTAQIEADSRGGFGAELGADARELEGKAVAPIQRHEHRMNIWRRTALFFRRLFS*
Ga0137394_102813902	3300012922	Vadose Zone Soil	SEQVEEITEGAVRLSLTREQVEQLGEFLEPATSAEIEPDSKGGIGESLSSEGRKLEGKVLAPTQRHEHSMNVWRRTAFFFRRLFR*
Ga0137407_123226742	3300012930	Vadose Zone Soil	DGLAIATSRFGKPRYVPSEQVDEITEGTVRLSLTLAQVDQLGEYLEPATSAEIEPDRKGGLGESVAAEARELEGKVFAPTQKHEHSMNIWRRIAFFFRRLLRR*
Ga0164301_102127451	3300012960	Soil	GLAIATSAFGKPRYVPSEQVAEITEGVVRLSLTREQVEQLAEYLETSTSAEIEPDSKGGIGESLRSEGRELEGKVLAPTQRHEHSMNVWRRIAFFFRRLFH*
Ga0134087_101547321	3300012977	Grasslands Soil	YVPSEQVGRITEGVVHLTLTRAQVERLGEYLEPATTAEIEPDSKGGAGEALAAEARELEGRAFAPIQRHEHPMNLWRRIAFFFRRKLS*
Ga0120132_10969202	3300013832	Permafrost	PRYVAAERVARIEDGAVHLSLTSAQLTELDAYLEPATSATIEPDGKGGIGETLHADVRELEGKVFAPTQRHEHPMNIWRRIAFYFRRRAG*
Ga0120149_12061341	3300014058	Permafrost	AIATSAFGKPRYVPAEQVTEITEGAMRLSLTPEQVGQLDEYLEPATSAEIEPDSKGGIGESIGAEIRHVEGELFAPTQRHEHPMNIWRRIAFFFRRRAS*
Ga0134081_101063381	3300014150	Grasslands Soil	SMFGKPRYVPSEQVAQITEGTVRLALTREQVEHLGEYREPATSARIEPDSRGGAGEAVSGEVRELEGKVVAPTQRQEHSMNIWRRIAFFFRRLFR*
Ga0182019_103856832	3300014498	Fen	VAESALGKPRYVLAEQVVEISDGVVRLSLTREQAGQLGEFRNPATSEEIEPDSNKGIGESLDSEIREVEGKVLAPTQRHERSLSIWSRLVLFFRRRRG*
Ga0173483_110037303	3300015077	Soil	PDQVAAADEFLEPATTAQIEADSRGGFGAELGADVRELEGKAVAPIQRHEHRMNIWRRTALFFRRLFS*
Ga0134089_104045512	3300015358	Grasslands Soil	FAKPTYVPAESVGPIYEGRIELTLSTAEVDALGEYLEPATSAEIEPDSKGGAGETLAADARELEGKVFAPIQRHEHPMNVWRRIAFFFRRR*
Ga0134085_105494452	3300015359	Grasslands Soil	EQVAEITEGTVRLSLTTAQVEQLGQYLEPATSAQIEPNSKGSIGESLSADARELEGKVLAPTQRHEHSMNLWRRIAFFFRRLFG*
Ga0132255_1046720052	3300015374	Arabidopsis Rhizosphere	EITDRSVRLSLTQDQVAALGEYLEPATSAVIEPAGKGGIGETLRADTRKAEAKVAAPIAKHEQSMSIWRRIAFFFKRL*
Ga0187786_102986272	3300017944	Tropical Peatland	IATSAFGKPRYVPSEQVGQILEGEVHLTLTQSQVEALGEYLEPATSAEIEPDSKGGIGESIGAEVRELEAKAFAPIEKREHTMNVYRRIAFFFRRLFR
Ga0187822_103604641	3300017994	Freshwater Sediment	SAFGKPRYVPSEQVGEIFEGEVHLTLSRDQAETLGEYLEPATSAEIEPDSKGGLGESLGADVREIEAKAFAPIEKREHSMNVYRRIAFFFRRLFK
Ga0184619_101278734	3300018061	Groundwater Sediment	DGLAITTTSFGKPRYVPAEQVAGITDGPVRLSLTQEQVDQLGEYLEPATSAEIEPDSKGGLGETLAADVRELEAKVLAPTQRHEHSMNIWRRIAFFFRRLLAG
Ga0066655_103704161	3300018431	Grasslands Soil	LAIATSMFGKPRYVPSEQVAEITEGTVRLALTREQVEHLDEYREPATSARIEPDSHGGAGEALSAEARELEGKVVAPTQRHEHSMNIWRRIAFFFRRLFR
Ga0066667_123065962	3300018433	Grasslands Soil	EQVAEITEGTVRLKLTKDQVDQLGEYLEPATSAEIEGDNRGGLGESVGAEARELEGKVFAPTQKREHSMNVWRRIAFFFRRLFRR
Ga0173479_102489401	3300019362	Soil	YVPAERVTTITEGRVDLSLAPDQVAAADEFLEPATTAQIEADSRGGFGAELGADARELEGKAVAPIQRHEHRMNIWRRTALFFRRLFS
Ga0193729_12618451	3300019887	Soil	RYVPAEQVGEITEGTVRLKLTTQQVESLEEYLEPATSAEIEADNKGGLGDSVRAEARELEGKVFAPTQKHEHSMNISRRIAFFFRRLFRR
Ga0206354_102738011	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	IFDGLAVARSAFGSPRYVPAEQVASIVEGTVSLSLAPAEVEQLGEYAEPATSARIEADSRGGAGEAIGAELRELEGRIVAPIESHEQRMSIWRRIAFFFRRLRG
Ga0207684_115623342	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	EQVAGISQGVVRLSLSREQVAQLSEYLEPATSAKIEPDSKGGLGETLAADAREVEAKVLAPTQRHEHSMNIWRRIAFFFRRLVG
Ga0207663_101949611	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	QVDEITEGTVRLSLTPAQVDQLGEYLEPATSAQIEPNSKGGMGESVRAEARELEGKAFAPTQRQEHSMNIWRRIAFFFRRLFS
Ga0207646_119366162	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	DSNADSFDGLAIATSRFGKPRYVPSEQVDEIIDGTVRLSLTAAQVEQLGEYLEPATSAQIEPNSKGGIGESLSADARELEGKVLAPTQRRQHSMNIWRRIAFFFRRLFG
Ga0208649_10085172	3300026022	Rice Paddy Soil	RYVPAEQVGRIEEGAVRLTITREQAEALGEYREPATSAEIEPDSKGGAGEAIASDVREVEAKAFAPIERHEHPMNVWRRIAFFFRRMVR
Ga0209027_11090632	3300026300	Grasslands Soil	GKPRYVLAEHVAEITDGVVRLALSHEQCAALGEYREPATSLEVEPDSKGGAGETVAADVREVESDVVAPIQSHEHSMNIFRRIAFFIRRKRGR
Ga0209153_10011401	3300026312	Soil	TEGTVQLELTREQVEQLGEYREPATSAEIEPDSKGGIGESLGADARELEGKALAPTQRREHSMNVWRRIAFFFRRLFG
Ga0209153_13040871	3300026312	Soil	RPRYVPAEQVAGISQGVVRLSLTGEQVAGLGEYFEPATSAEIEPESKGGLGETLAADVSEVEARVLAPTQRHEHSMNIWRRIAFFFRRLAG
Ga0209057_11565082	3300026342	Soil	AEQVAEITEGTVRLKLTKDQVDQLGEYLEPATSAEIEGDNRGGLGESVGAEARELEGKVFAPTQKREHSMNVWRRIAFFFRRLFRR
Ga0247847_10254072	3300026450	Soil	QVVEISDGVVRLSLTREQAGQLGEFRNPATSEEIEPDSNKGIGESLGSEIREVEGKVLAPTQRHERSLSIWSRLVLFFRRRRG
Ga0257147_10479081	3300026475	Soil	ALGQPKYFPAEQIATITEGRIDLSLTREQVEGADAFLEPATSAVIEPDDHRGVGESIGAEARKLEGKAFAPTQRHEHPMNIWRRIAFYFRRLFS
Ga0209161_101272651	3300026548	Soil	TEGRVNLSLTRGEVEASDEFLEPATTAEIEPDSRGGLGEQFGADIRELEGKAAAPVQRHEHRMNVWRRAAFFFRRFFARD
Ga0209735_11386531	3300027562	Forest Soil	ATSAFGKPRYVPSEQVAKITEGAVRLSLTREQVEQLAEYLEPSTSAEIEPDSKGGIGESLSSEGRKLEGKVLAPTQRHEHSMNVWRRIAFFFRRLFS
Ga0209590_110371511	3300027882	Vadose Zone Soil	ALGKPRYVPAEQVAEITQGTVRLSLTREQVGQLGEYLEPATSAEIEPDSRGGIGESLSAEIRKVEGEIFAPTQRHEHSMNIWRRIAFFFRRLAG
Ga0265318_100499991	3300028577	Rhizosphere	TTALGKPRYVPAEQVTQITDGVVHLSLTPEQVSALGEYLEPATTAEIEPDSKGGLGESIGAELRELEGDVLAPTQRREHSMNIWRRIAFFFRRLR
Ga0265322_100332821	3300028654	Rhizosphere	YVPAEQVTQITDGVVHLSLTPEQVSALGEYLEPATTAEIEPASKGGLGESIRSELRELEGDVLAPTQRREHSMNIWRRIAFFFRRIR
Ga0265336_100041199	3300028666	Rhizosphere	GLAIATTALGKPRYVPAEQVTQITDGVVHLSLTPEQVSALGEYLEPATTAEIEPDSKGGLGESIRSELRELEGDVLAPTQRREHSMNIWRRIAFFFRRIR
Ga0307307_102120082	3300028718	Soil	FDGLAIATSTLGKPRYVPSEQVDEITEGTVRLSLTPAQVDQLGEYLEPATSAQIEPNSKGGIGESVRAEARELEGKAFAPTQNQEHSMNIWRRIAFFFRRLFS
Ga0307301_100618952	3300028719	Soil	TEGTVRLSLTPAQVDQLGEYLEPATSAQIEPNSKGGIGESVMAEARELEGKAFAPTQNQEHSMNIWRRIAFFFRRLFS
Ga0307282_102295741	3300028784	Soil	SLLGKPRYVPSEQVAEITEGTVRLSLSREQVEQLSEYLEPAMSAEIEPDSKGGIGESLSSEARKLEGKALAPTQRREHSMNVWRRVGFFFRRLFKRSVG
Ga0307290_100166044	3300028791	Soil	EITEGTVRLKLGPEQVERLEEYLEPATSAEIEADNKGGLGASLGAEARELEGKIFAPTQKREHSMNISRRIAFFFRRLFRR
Ga0307284_100640451	3300028799	Soil	AIATTSFGKPRYVPAEQVAGISDGTVRLSLTQEQVAQLGEYLEPATSAEIEPGSKGGLGETLAADVRELEAKVLAPTQRHEHSMNIWRRIAFFFRRLVG
Ga0307289_101270882	3300028875	Soil	AIATSRFGKPRYVPSEQVDEITEGTVRLSLSPTQVDQLGEYLEPATSAQIEPDSKGGIGESLSADARELEGKAFAPTQRQEHSMNIWRRIAFFFRRLFS
Ga0170824_1117565232	3300031231	Forest Soil	GRIEDGSVHLSLTREQLDQLDVYLEPATSATIEPNGKGGIGETLRADVRELEGKAFAPTQQHEHHMNVWRRIAFFFRRRAG
Ga0265325_105042691	3300031241	Rhizosphere	LAIATSAFGKPRYVPSEQVGQILEGEVHLTLTHAQVDALGEYLEPATTAEIEPDSKGGIVQGIESEVRELEGKAFAPIEKREHSMNIYRRIGFFFRRLFK
Ga0265327_102228261	3300031251	Rhizosphere	KYVPSEQVGQILEGEVHLTLTHAQVDALGEYLEPATSAEIEPDSKGGIVQGIESEVRELEGKAFAPIEKREHSMNIYRRIGFFFRRLFK
Ga0310886_101299731	3300031562	Soil	RYVPSEQVDEITEGTVRLSLTPAQVERLVEYLEPATSAQIEPDSKGGVGESLGAEARELEGKAFAPTQRHEHSMNIWRRIAFFFRRLFS
Ga0318573_107787332	3300031564	Soil	GKPVYVPAEQVGTITEGAVHLTLTTEQVGGLGDYLEPATSAEIEADSKGGIANSVGAELRELEGDAVAPIQKHEHSMNIWRRIAFFFRRLFS
Ga0265313_103417532	3300031595	Rhizosphere	IFDGLAIATSAFGKPRYVPSEQVGQILEGEVHLTLTHAQVDALGEYLEPATTAEIEPDSKGGIVQGIESEVRELEGKAFAPIEKREHSMNIYRRIGFFFRRLFK
Ga0318497_108143522	3300031805	Soil	FDGLAVARTALGKPVYVPAEQVGTITEGAVHLTLTTEQVGGLGDYLEPATSAEIEADSKGGIANSVGAELRELEGDAVAPIQKHEHSMNIWRRIAFFFRRLFS
Ga0318551_100794761	3300031896	Soil	ALGKPVYVPAEQVGTITEGAVHLTLTTEQVGGLGEYLEPATSAEIEADSKGGIANSVGAELRELEGDAVAPIQKHEHSMNIWRRIAFFFRRLFS
Ga0318553_103669072	3300032068	Soil	ARTALGKPVYVPAEQVGTITEGAVHLTLTTEQVGGLGDYLEPATSAEIEADSKGGIANSVGAELRELEGDAVAPIQKHEHSMNIWRRIAFFFRRLFS
Ga0335070_108572602	3300032829	Soil	LGKPRYVPAEQVREIREGEVHLSITREQAQSLGEYLEPATSAEIEADSKPGSKLAADVREVEAAAVAPIQTHEHSMNPLRRLGFFFRRLVRR
Ga0335070_117478691	3300032829	Soil	VAESPLGKPRYVPAEQVAEITQGTVRLSITSERARQLGEYLEPATSAEIEPDSKGGFSEGVRAEARELEGDVLAPTQRHEHSMNIWRRVGFAIKRRLGKP
Ga0335069_101252664	3300032893	Soil	AEQVAEITQGTVRLSITSERARQLGEYLEPATSAEIEPDSKGGFSEGVRAEARELEGDVLAPTQRHEHSMNIWRRVGFAIKRRLGKP
Ga0372943_1148266_1_264	3300034268	Soil	VPAEDIERIEQGVVRLRLSGDQAEHLGEYLEPATSAMIEPESKGGVGETLRADARELEGKAFAPTQGHEHSMNFWRRLAFFFRRRGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063664

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences