Metagenome / Metatranscriptome Family F063635

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063635
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	49 residues
Representative Sequence	SHQLYPSGWKVAFDTARPTLPVEEESVKRNRLVNLAARSFVVLSHER
Number of Associated Samples	114
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.78 %
% of genes near scaffold ends (potentially truncated)	97.67 %
% of genes from short scaffolds (< 2000 bps)	95.35 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.574 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (18.605 % of family members)
Environment Ontology (ENVO)	Unclassified (24.806 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.713 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 29.33% Coil/Unstructured: 70.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00128	Alpha-amylase	93.80
PF06315	AceK_kinase	5.43

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	93.80
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	93.80
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	93.80
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	93.80
COG4579	Isocitrate dehydrogenase kinase/phosphatase	Signal transduction mechanisms [T]	5.43

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.57 %
Unclassified	root	N/A	5.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.57 %
Unclassified	root	N/A	5.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.57 %
Unclassified	root	N/A	5.43 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	70.54 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	7.75 %
Unclassified	root	N/A	5.43 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	66.67 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	7.75 %
Unclassified	root	N/A	5.43 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	66.67 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	7.75 %
Unclassified	root	N/A	5.43 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	66.67 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	7.75 %
Unclassified	root	N/A	5.43 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	66.67 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	7.75 %
Unclassified	root	N/A	5.43 %
Thioalkalivibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio	0.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	66.67 %
unclassified Verrucomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae	7.75 %
Unclassified	root	N/A	5.43 %
Thioalkalivibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio	0.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	66.67 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	7.75 %
Unclassified	root	N/A	5.43 %
Thioalkalivibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio	0.78 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001124\|JGI12692J13336_1009486	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	534	Open in IMG/M
3300001166\|JGI12694J13545_1019957	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300001546\|JGI12659J15293_10056835	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	883	Open in IMG/M
3300001593\|JGI12635J15846_10635015	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	619	Open in IMG/M
3300004080\|Ga0062385_10466208	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	771	Open in IMG/M
3300004082\|Ga0062384_100507855	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300004092\|Ga0062389_102110362	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300005163\|Ga0066823_10056743	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	721	Open in IMG/M
3300005712\|Ga0070764_10414131	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300005994\|Ga0066789_10095246	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300005994\|Ga0066789_10284001	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300006162\|Ga0075030_101398631	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300006638\|Ga0075522_10324104	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	742	Open in IMG/M
3300007788\|Ga0099795_10466713	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	583	Open in IMG/M
3300009500\|Ga0116229_10613005	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	894	Open in IMG/M
3300009510\|Ga0116230_10061058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio	3390	Open in IMG/M
3300009633\|Ga0116129_1087336	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	912	Open in IMG/M
3300009635\|Ga0116117_1092734	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	754	Open in IMG/M
3300009701\|Ga0116228_10176801	Not Available	1538	Open in IMG/M
3300009701\|Ga0116228_11148627	Not Available	514	Open in IMG/M
3300009709\|Ga0116227_10515408	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	908	Open in IMG/M
3300010876\|Ga0126361_10353133	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	740	Open in IMG/M
3300011120\|Ga0150983_14369717	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	609	Open in IMG/M
3300011271\|Ga0137393_11652115	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	530	Open in IMG/M
3300012359\|Ga0137385_11474411	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	544	Open in IMG/M
3300012924\|Ga0137413_10196585	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1352	Open in IMG/M
3300012925\|Ga0137419_10737890	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	801	Open in IMG/M
3300012927\|Ga0137416_11375656	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	639	Open in IMG/M
3300013314\|Ga0175859_1078446	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1024	Open in IMG/M
3300013314\|Ga0175859_1111474	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1287	Open in IMG/M
3300014165\|Ga0181523_10401701	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	763	Open in IMG/M
3300014167\|Ga0181528_10538632	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300014168\|Ga0181534_10343245	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	814	Open in IMG/M
3300014490\|Ga0182010_10184653	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1088	Open in IMG/M
3300014838\|Ga0182030_11679162	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300015052\|Ga0137411_1280777	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	785	Open in IMG/M
3300015206\|Ga0167644_1032555	All Organisms → cellular organisms → Bacteria	2076	Open in IMG/M
3300015241\|Ga0137418_10612054	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	852	Open in IMG/M
3300017823\|Ga0187818_10318101	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300017948\|Ga0187847_10407580	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	748	Open in IMG/M
3300018009\|Ga0187884_10431993	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300018042\|Ga0187871_10709839	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	560	Open in IMG/M
3300018085\|Ga0187772_10800610	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300019887\|Ga0193729_1192768	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	701	Open in IMG/M
3300019890\|Ga0193728_1349674	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	531	Open in IMG/M
3300020034\|Ga0193753_10310327	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	674	Open in IMG/M
3300020140\|Ga0179590_1115734	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	726	Open in IMG/M
3300020579\|Ga0210407_10190779	Not Available	1590	Open in IMG/M
3300020583\|Ga0210401_11228231	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	608	Open in IMG/M
3300021168\|Ga0210406_10382215	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1131	Open in IMG/M
3300021168\|Ga0210406_10786829	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	725	Open in IMG/M
3300021168\|Ga0210406_11250937	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	537	Open in IMG/M
3300021180\|Ga0210396_10894345	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	757	Open in IMG/M
3300021181\|Ga0210388_10175596	All Organisms → cellular organisms → Bacteria	1868	Open in IMG/M
3300021402\|Ga0210385_10233521	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1347	Open in IMG/M
3300021403\|Ga0210397_10103258	All Organisms → cellular organisms → Bacteria	1929	Open in IMG/M
3300021404\|Ga0210389_10382893	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1106	Open in IMG/M
3300021405\|Ga0210387_11093144	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	696	Open in IMG/M
3300021406\|Ga0210386_10599229	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	952	Open in IMG/M
3300021407\|Ga0210383_11537351	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	549	Open in IMG/M
3300021432\|Ga0210384_10731785	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	884	Open in IMG/M
3300021475\|Ga0210392_11303387	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	543	Open in IMG/M
3300021477\|Ga0210398_10015331	All Organisms → cellular organisms → Bacteria → Proteobacteria	6650	Open in IMG/M
3300022557\|Ga0212123_10534606	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	753	Open in IMG/M
3300024222\|Ga0247691_1011104	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1478	Open in IMG/M
3300025463\|Ga0208193_1045071	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	996	Open in IMG/M
3300025544\|Ga0208078_1123344	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	515	Open in IMG/M
3300026215\|Ga0209849_1099965	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	512	Open in IMG/M
3300026291\|Ga0209890_10141072	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	807	Open in IMG/M
3300026291\|Ga0209890_10176647	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	696	Open in IMG/M
3300026374\|Ga0257146_1064766	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	593	Open in IMG/M
3300026446\|Ga0257178_1061347	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	501	Open in IMG/M
3300026555\|Ga0179593_1201097	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300026557\|Ga0179587_10426538	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	866	Open in IMG/M
3300026557\|Ga0179587_10962482	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	562	Open in IMG/M
3300027381\|Ga0208983_1065289	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300027432\|Ga0209421_1106439	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300027565\|Ga0209219_1098046	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	723	Open in IMG/M
3300027609\|Ga0209221_1130744	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	633	Open in IMG/M
3300027648\|Ga0209420_1088094	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	891	Open in IMG/M
3300027663\|Ga0208990_1174056	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300027860\|Ga0209611_10224839	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1134	Open in IMG/M
3300027884\|Ga0209275_10551511	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	660	Open in IMG/M
3300027895\|Ga0209624_10139646	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1598	Open in IMG/M
3300027895\|Ga0209624_10185615	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1380	Open in IMG/M
3300027908\|Ga0209006_10320433	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1319	Open in IMG/M
3300027908\|Ga0209006_10863466	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	729	Open in IMG/M
3300028565\|Ga0302145_10141277	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300028748\|Ga0302156_10166799	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1058	Open in IMG/M
3300028762\|Ga0302202_10101042	Not Available	1654	Open in IMG/M
3300028773\|Ga0302234_10024071	Not Available	2881	Open in IMG/M
3300028813\|Ga0302157_10652867	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	538	Open in IMG/M
3300028877\|Ga0302235_10398271	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	589	Open in IMG/M
3300029701\|Ga0222748_1035667	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	800	Open in IMG/M
3300029882\|Ga0311368_11064273	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	528	Open in IMG/M
3300029910\|Ga0311369_10608947	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	910	Open in IMG/M
3300029910\|Ga0311369_11136975	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	607	Open in IMG/M
3300029911\|Ga0311361_10262657	All Organisms → cellular organisms → Bacteria	2000	Open in IMG/M
3300029922\|Ga0311363_10714785	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	946	Open in IMG/M
3300029952\|Ga0311346_11080841	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	638	Open in IMG/M
3300029954\|Ga0311331_11628730	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	521	Open in IMG/M
3300029999\|Ga0311339_11601003	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	575	Open in IMG/M
3300030020\|Ga0311344_10373182	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1326	Open in IMG/M
3300030053\|Ga0302177_10162700	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1251	Open in IMG/M
3300030056\|Ga0302181_10040758	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2506	Open in IMG/M
3300030399\|Ga0311353_10526372	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1044	Open in IMG/M
3300030503\|Ga0311370_11786313	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	626	Open in IMG/M
3300030520\|Ga0311372_10874438	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1212	Open in IMG/M
3300030520\|Ga0311372_11599513	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	794	Open in IMG/M
3300030524\|Ga0311357_11457863	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	581	Open in IMG/M
3300030580\|Ga0311355_10305599	Not Available	1596	Open in IMG/M
3300030618\|Ga0311354_10318586	Not Available	1600	Open in IMG/M
3300030646\|Ga0302316_10070953	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1524	Open in IMG/M
3300030730\|Ga0307482_1084740	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300030737\|Ga0302310_10388103	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	767	Open in IMG/M
3300030737\|Ga0302310_10640260	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	558	Open in IMG/M
3300031231\|Ga0170824_107699613	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	905	Open in IMG/M
3300031234\|Ga0302325_12280714	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	655	Open in IMG/M
3300031234\|Ga0302325_13199622	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	523	Open in IMG/M
3300031236\|Ga0302324_100695010	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1437	Open in IMG/M
3300031236\|Ga0302324_100932878	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1189	Open in IMG/M
3300031249\|Ga0265339_10436246	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	609	Open in IMG/M
3300031525\|Ga0302326_11996854	All Organisms → cellular organisms → Bacteria → Proteobacteria	749	Open in IMG/M
3300031525\|Ga0302326_13451683	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	526	Open in IMG/M
3300031708\|Ga0310686_101302261	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	611	Open in IMG/M
3300031715\|Ga0307476_11148746	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	569	Open in IMG/M
3300031718\|Ga0307474_10842039	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	726	Open in IMG/M
3300031754\|Ga0307475_10386414	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1125	Open in IMG/M
3300034129\|Ga0370493_0273936	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	575	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.02%
Host-Associated	Host-Associated	6.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.40%
Aquatic	Environmental → Aquatic	11.63%
Plants	Host-Associated → Plants	6.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.81%
Peat	Environmental → Terrestrial → Peat	25.58%
Freshwater	Environmental → Aquatic → Freshwater	10.08%
Peat Moss	Host-Associated → Plants → Peat Moss	4.65%
Phyllosphere	Host-Associated → Plants → Phyllosphere	1.55%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.78%
Sediment	Environmental → Aquatic → Sediment	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	25.58%
Loam	Environmental → Terrestrial → Soil → Loam	13.18%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.08%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.98%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	4.65%
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	1.55%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	25.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.18%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.98%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.43%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	4.65%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.33%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.55%
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	1.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.78%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	18.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.30%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	6.20%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	4.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.10%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	3.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.33%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.33%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.55%
Moss Associated	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Moss Associated	1.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.78%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.78%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.78%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.78%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001124	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3	Environmental	Open in IMG/M
3300001166	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009510	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013314	Moss microbial communities from three moss species from boreal forest in Fairbanks, Alaska, USA Reanalysis	Host-Associated	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300026215	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028565	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_3	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300034129	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12692J13336_10094862	3300001124	Forest Soil	FRISHELYHGGWKIAFDTARPTLEIDKESVKRNRLVNLAARSMVLLSHER*
JGI12694J13545_10199572	3300001166	Forest Soil	PVAFRISHELYHGGWKIAFDTARPTLEIDKESVKRNRLVNLAARSMVLLSHER*
JGI12659J15293_100568351	3300001546	Forest Soil	HEPVAFRISHELYHGGWKIAFDTARPVLEIDKESVKRNRLVQLAGRSLVLLSHER*
JGI12635J15846_106350152	3300001593	Forest Soil	NAHHERVPFRISYELYHSGWKVAFDTARPDLPIEQEVVNRNRLIDLTERSFVVLSHER*
Ga0062385_104662081	3300004080	Bog Forest Soil	SHQLYPSGWKVAFDTARPTLPVEEESVKRNRLVNLAARSFVVLSHER*
Ga0062384_1005078552	3300004082	Bog Forest Soil	AHYQRVAFRISYELYHSGWKIVLDTARPDLPVEEQSVGRNRLVDLTERSFVVLSHDR*
Ga0062389_1021103621	3300004092	Bog Forest Soil	WRIAFDTARPDLEMDKESVKRNRLVNLEARSLVLLSHER*
Ga0066823_100567432	3300005163	Soil	YHGGWKLAFDTSRPMLSVDTEPVGRNRLVKLAARSLVLLSHER*
Ga0070764_104141312	3300005712	Soil	HELYHGGWKVAFDTARPELEIDKESVKRNRLVNLEARSLVLLSHER*
Ga0066789_100952462	3300005994	Soil	HEPVAFRISHELYHAGWKVAFDTARPTLEIDRESVKRNRFNLVARSMVLLSHAR*
Ga0066789_102840012	3300005994	Soil	LLNAHHEPVSFRISHQLNPAVWRVAFDTARPTLPIETEAVKRNRLVSLEARSLVVLSNARVPGHAR*
Ga0075030_1013986311	3300006162	Watersheds	LNAHHEPVPFRISFELYHGGWKVAFDTARPTLSVDTEPVGRNRLVKLAARSLVLLSHER*
Ga0075522_103241042	3300006638	Arctic Peat Soil	IAFDTARPTLEIDKESVKRNRLVNLAARSMMLLSHER*
Ga0099795_104667132	3300007788	Vadose Zone Soil	LYHSGWRVAFDTARPNLPMEREVVKRNRIVDMAPRSFVVLSHERSLSHER*
Ga0116229_106130052	3300009500	Host-Associated	SHELYPTGWKVAFDTARPALALEQEAVKRSRSVNLAPRSFVLLSRER*
Ga0116230_100610583	3300009510	Host-Associated	WKIAFDTARPELPTDDELVRRNRLVSLAARSFVLLSHER*
Ga0116129_10873362	3300009633	Peatland	LLLLNSHHEPVSFRISHELFPTGWKIAFDTARPDLETDQELVRRNRLVSLVARSFVLLSHER*
Ga0116117_10927341	3300009635	Peatland	LLLLNAYHEPVSFRISHQLHPAGWKVAFDTARPTLPVEQEAVKRNRLVSLAARSFVVLSHER*
Ga0116228_101768011	3300009701	Host-Associated	KVAFDTARPELESDRELVRRNRLVGLAARSFVLLSHER*
Ga0116228_111486272	3300009701	Host-Associated	PTGWRIAFDTARPELASDLEFVRRNRLVDLAARSFVLLGHER*
Ga0116227_105154082	3300009709	Host-Associated	WKIAFDTARPTIPIERELVKRNRIVAMAPRSFVVLSHER*
Ga0126361_103531332	3300010876	Boreal Forest Soil	GWKVALDTARPTLPVETEAVKRNRLVSLAARSFVVLSHER*
Ga0150983_143697171	3300011120	Forest Soil	EPVAFRISHELYHGGWKLAFDTARPALEIDKESVKRNRLVQLAGRSMVLLSHER*
Ga0137393_116521152	3300011271	Vadose Zone Soil	HEPVTFRISYQLYHSGWKVAFDTARPDLGVEREFVKRNRMVEMAARSFVLLSHER*
Ga0137385_114744111	3300012359	Vadose Zone Soil	LYPSGWKVAFDTARPTLPAEKEAVKRNRLVSLAARSFVVLSHER*
Ga0137413_101965851	3300012924	Vadose Zone Soil	VAFRISHELYHGGWKIAFDTARPDLEIDKESVKRNRLVQLAGRSLVLLSHER*
Ga0137419_107378902	3300012925	Vadose Zone Soil	HELYHAGWKVAFDTARPTLEIDRESVKRNRFNLAARSLVLLSHAR*
Ga0137416_113756562	3300012927	Vadose Zone Soil	AHHEPVSFRISHKLYPSGWKVAFDTARPALPVEQEAVKRNRLVSLAARSFVVLSHER*
Ga0175859_10784462	3300013314	Moss Associated	LVAFDTARPQLPVEKEPVKRNRLVSLAARSFVVLSHAR*
Ga0175859_11114742	3300013314	Moss Associated	AYHEPVAFRISHELPHAGWKIAFDTARPQLPLERESVKRNRIVDMAPRSFVVLSHEHPAGA*
Ga0181523_104017011	3300014165	Bog	AHHERVQFRISYELYHSGWRIAFDTARPELPIEEESVKRYRLVDLVPRSFVVLSHER*
Ga0181528_105386321	3300014167	Bog	GWKVAFDTARPDLPLESELVKRNRVVDMAPRSFVMLCRDR*
Ga0181534_103432451	3300014168	Bog	HHEPVAFRISYELYHAGWKVAFDTARPDLAVEEDLVKRNRLIDLAPRSFVVLSHER*
Ga0182010_101846532	3300014490	Fen	WKVAFDTARPTLPVEEEPVRRNRLVSLAARSFVVLKYGR*
Ga0182030_116791621	3300014838	Bog	FRISYQLYHAGWKVAFDTARPNLPLEQEAVKRNRIVDMAPRSFVVLSHER*
Ga0137411_12807771	3300015052	Vadose Zone Soil	TRQVGGWRVAFDTARPALPVEKEAVKRNRLVSLAARSFVVLSHER*
Ga0167644_10325551	3300015206	Glacier Forefield Soil	KIAFDTARPTLEIDKESVKRNRLVNLAARSMVLLSHER*
Ga0137418_106120542	3300015241	Vadose Zone Soil	EPVAFRISHELYHAGWKVAFDTARPTLEIDRESVKRNRFNLAARSLVLLSHAR*
Ga0187818_103181011	3300017823	Freshwater Sediment	IAFDTARPDLPIEQESVKRNRLVDLTARSLVLLSHVR
Ga0187847_104075802	3300017948	Peatland	YHSGWKFAFDTARPDLPVEEEAVKRYRYVKLAARSFVLLSHER
Ga0187884_104319931	3300018009	Peatland	HHEPVAFRISYQLYHAGWKVAFDTARPNLPLEQEAVKRNRIVDMAPRSFVVLSHER
Ga0187871_107098392	3300018042	Peatland	YHAGWKIAFDTARPDLPVEQEAVKRNRLVDLAPRSFVVLTHER
Ga0187772_108006101	3300018085	Tropical Peatland	VFDTARPDLPLEHESVKRNRLVDLAPRSFVVLTHER
Ga0193729_11927681	3300019887	Soil	WKVAFDTARPDLAQGLESVKRNRMVEMAARSFVLLSHER
Ga0193728_13496741	3300019890	Soil	AFDTARPALEIEKETVKRNRLVHLAARSLVLLSHER
Ga0193753_103103271	3300020034	Soil	KIAFDTARPGLEIDKEAVKRNRLVQLAGRSLVLLSHER
Ga0179590_11157341	3300020140	Vadose Zone Soil	FDTARPALPVEKEAVKRNRLVSLAARSFVVLSHER
Ga0210407_101907791	3300020579	Soil	ISYQLYHSGWKVAFDTARPDLAIEREFVKRNRMVEMAARSFVLLSHER
Ga0210401_112282312	3300020583	Soil	LHPSGWKVAFDTARPTLPVETESVKRNRLVSLAARSFVVLSHER
Ga0210406_103822152	3300021168	Soil	EPVAFRISHELYHGGWRIAFDTARPTLEIDKESVKRNRLVNLAARSLVLLSHER
Ga0210406_107868291	3300021168	Soil	AFDTARPTLPVEKEFVKRNRLVSLAARSFVVLSHER
Ga0210406_112509372	3300021168	Soil	VAFRISYELYHSGWKIVFDTARPDLPPEQESVKRNRLVDLAPRSFVLLCHER
Ga0210396_108943452	3300021180	Soil	HGGWKLAFDTARPALEIDKESVKRNRLVQLAGRSMVLLSHEQ
Ga0210388_101755961	3300021181	Soil	VAFDTARPTLPVETESVKRNRLVSLAARSFVVLSHER
Ga0210385_102335211	3300021402	Soil	ERVAFRISYELYHTGWKIAFDTARPDLPLEQESVQRNRLVDLAPRSFVVLCHER
Ga0210397_101032581	3300021403	Soil	NAHHEPVGFRISFELYHGGWKVAFDTSRPALSVDTESVGRNRLVKLAARSLVLLSHER
Ga0210389_103828932	3300021404	Soil	AHHESVAFRISHELYHGGWRVAFDTARPALEIDKESVKRNRLVNLEARSLVLLSHER
Ga0210387_110931441	3300021405	Soil	RISYQLYHSGWKVAFDTARPDLPIGLESVKRNRMVEMAARSFVLLSHER
Ga0210386_105992292	3300021406	Soil	QLYPTGWKVAFDTARPALPIEQESVKRNRLVSLAARSFVVLSHERPVDR
Ga0210383_115373512	3300021407	Soil	LYHGGWKVAFDTARPTLEIDKESVKRNRLVNLAARSMVLLSHER
Ga0210384_107317852	3300021432	Soil	AYHEPVSFRISHELYPSGWKVAFDTARPALPAETEAVKRNRLVSLAARSFVLLSHER
Ga0210392_113033872	3300021475	Soil	YHGGWRIAFDTARPTLEIDKESVKRNRLVNLAARSLVLLSHER
Ga0210398_100153315	3300021477	Soil	HELYHGGWKIAFDTARPTLEIDKESVKRNRLVNLAARSMVLLSHER
Ga0212123_105346061	3300022557	Iron-Sulfur Acid Spring	LLLNAYHEPVSFRISHELYPSGWKVAFDTARPELPVEKEAVKRNRLVSLAARSFVVLSHE
Ga0247691_10111041	3300024222	Soil	HHEPVAFRISHELYHGGWKIAFDTARPDLEIDKEAVKRNRLVQLAGRSLVLLSHER
Ga0208193_10450711	3300025463	Peatland	FDTARPALEIGKETVKRNRLVQLAGRSMVLLSHER
Ga0208078_11233441	3300025544	Arctic Peat Soil	GGWKIAFDTARPTLEIDKESVKRNRLVNLAARSMMLLSHER
Ga0209849_10999652	3300026215	Soil	GWKIAFDTARPTLEIDKESVKRNRLVNLLPRSMVLLSHER
Ga0209890_101410721	3300026291	Soil	AFRISHELYHAGWKVAFDTARPTLEIDRESVKRNRFNLVARSMVLLSHAR
Ga0209890_101766471	3300026291	Soil	LLNAHHEPVSFRISHQLNPAVWRVAFDTARPTLPIETEAVKRNRLVSLEARSLVVLSNARVPGHAR
Ga0257146_10647661	3300026374	Soil	NAHHESVSFRISHELYPSGWKVAFDTARPALPAEKEAVKRNRLVSLAARSFVLLSHER
Ga0257178_10613472	3300026446	Soil	QLYPSGWRVAFDTARPALPVEKEAVKRNRLVSLAARSFVVLSHER
Ga0179593_12010971	3300026555	Vadose Zone Soil	GWKIAFDTARPTLEIDKEAVKRNRLVQLAGRSLVLLSHER
Ga0179587_104265381	3300026557	Vadose Zone Soil	HELYHAGWKVAFDTARPTLEIDRESVKRNRFNLAARSLVLLSHER
Ga0179587_109624821	3300026557	Vadose Zone Soil	EPVSFRISHELYPSGWKVAFDTARPALPVEKEAVKRNRLVSLAARSFVVLSHER
Ga0208983_10652891	3300027381	Forest Soil	SFRISHQLYPSGWKVAFDTARPTLPVEKEAVKRNRLVSLAARSFVVLSHER
Ga0209421_11064391	3300027432	Forest Soil	LLNSHHEPVTFRISYQLYHSGWKVAFDTARPNLPLEREVVKRNRIVDMAPRSFVVLSHER
Ga0209219_10980461	3300027565	Forest Soil	HELYPSGWKVAFDTARPALLVENEAVKRNRLVSLAARSLVVLSHGR
Ga0209221_11307442	3300027609	Forest Soil	FVFDTARPELPLEKESVKRYRFVNLAARSFVLLSHER
Ga0209420_10880942	3300027648	Forest Soil	SHELYHGGWRIAFDTARPTLEIDKESVKRNRLVNLAARSMVLLSHER
Ga0208990_11740562	3300027663	Forest Soil	TFRISYQLYHSGWKVAFDTARPDLAVEREFVKRNRMVEMAARSFVLLSHER
Ga0209611_102248392	3300027860	Host-Associated	ISHELFPTGWKVAFDTARPELESDRELVRRNRLVGLAARSFVLLSHER
Ga0209275_105515111	3300027884	Soil	ISYELYHSGWRIAFDTARPDLPIEEESVKRYRLVDLVPRSFVVLSHER
Ga0209624_101396461	3300027895	Forest Soil	LYHGGWKIAFDTARPTLEIDKESVKRNRLVNLAARSMVLLSHER
Ga0209624_101856152	3300027895	Forest Soil	PVSFRISHELHPSGWKVAFDTARPALPVETEAVKRNRLVSLAARSFVVLSHER
Ga0209006_103204331	3300027908	Forest Soil	GWKVAFDTARPTLAVETESVKRNRLVSLAARSFVVLSHER
Ga0209006_108634662	3300027908	Forest Soil	AFRISYELYHTGWKIAFDTSRPDLPLEQESVKRNRLVDLAARSFVVLCHER
Ga0302145_101412771	3300028565	Bog	AHHEPVAFRISYQLHHTGWKVAFDTARPDLPLESELVKRNRVVDMAPRSFVMLCRDR
Ga0302156_101667992	3300028748	Bog	EDMDFLLLLNSYHEPVSFRISHELFPTGWRVAFDTARPSLETDRELVRRNRLVGLAARSFVLLSHER
Ga0302202_101010421	3300028762	Bog	VDFRLANELPHSGWKIAFETARPELAVERESVKRNRFVKLAERSFVLLSHER
Ga0302234_100240713	3300028773	Palsa	AHHEPVSFRISHQLYPSGWKVAFDTARPTLPVEQESVKRNRHVSLAARSFVLLSHERQVD
Ga0302157_106528671	3300028813	Bog	FDTARPDLAVEQESVKRNRLVDLAPRSFVVLTHER
Ga0302235_103982712	3300028877	Palsa	ILLNAHYQRVAFRISYELYHSGWKIVLDTARPDLPVEEQSVGRNRLVDLTERSFVLLSHD
Ga0222748_10356672	3300029701	Soil	LGSGWKIVLDTSRPDLPVEEQSVGRNRLVDLTERSFVVLSHDR
Ga0311368_110642731	3300029882	Palsa	SFRISHQLYPSGWKVAFDTARPTLPVEQESVKRNRHVSLAARSFVLLSHERQVDR
Ga0311369_106089471	3300029910	Palsa	LYHSGWKVAFDTARPDLPIEEESVGRNRLVDLTERSFVVLSHDR
Ga0311369_111369752	3300029910	Palsa	HELYHGGWNVAFDTARPTLGVDTEAVKRNRLVNLAARSLVLLSHER
Ga0311361_102626572	3300029911	Bog	NAYHEPVSFRISHELHPAGWKIAFDTARPTLAVEQEAVRRNRLVRLAARSFVVLSHER
Ga0311363_107147851	3300029922	Fen	WKIAFDTARPDLPFEQEEVKRNRLVDLAPRSFVVLCHER
Ga0311346_110808412	3300029952	Bog	AGWKIAFDTARPDLAVEQESVKRNRLVDLAPRSFVVLTHER
Ga0311331_116287302	3300029954	Bog	AFRISYQLYHSGWKVAFDTARPELPLEREVVKRNRIVDMAPRSFVVLSHERSFRDR
Ga0311339_116010031	3300029999	Palsa	FDTARPTLPVEQEAVKRNRLVSLAARSFVVLSHAR
Ga0311344_103731821	3300030020	Bog	AHHEPVPFRISYELYHAGWKIAFDTARPDLAVEQESVKRNRLVDLAPRSFVVLTHER
Ga0302177_101627002	3300030053	Palsa	YQRVAFRISYELYHSGWKVVLDTARPDLPVEEQSVGRNRLVDLTERSLVVLSHDR
Ga0302181_100407582	3300030056	Palsa	YELYHSGWKIVFDTARPDLPIEEESVGRNRLVDLTERSFVVLSHDR
Ga0311353_105263721	3300030399	Palsa	EDKDFLLLLNAHYQRVAFRISYELYHSGWKIVFDTARPDLPIEEESVGRNRLVDLTERSFVVLSHDR
Ga0311370_117863132	3300030503	Palsa	ELYHSGWKIVLDTARPDLPVEEQSVGRNRLVDLTERSFVVLSHDR
Ga0311372_108744381	3300030520	Palsa	YQRVAFRISYELYHSGWKIVLDTARPDLPAEEQSVGRNRLVDLTERSFVVLSHDR
Ga0311372_115995131	3300030520	Palsa	HERVPFRISYELYHSGWKVVFDTARPDLAIEQEVVSRNRLIDLSERSFVVLSHER
Ga0311357_114578632	3300030524	Palsa	HYQRVAFRISYELYHSGWKIVFDTARPDLPIEEESVGRNRLVDLTERSFVVLSHER
Ga0311355_103055992	3300030580	Palsa	ELYHSGWKVVFDTARPDLAIEQEVVSRNRLIDLSERSFVVLSHER
Ga0311354_103185862	3300030618	Palsa	AHHEPVAFRISHELYHGGWRIAFDTARPTLEIDKESVKRNRLVNLAARSMVLLSHER
Ga0302316_100709531	3300030646	Palsa	ARPTLPVEQESVKRNRHVSLAARSFVLLSHERQVDR
Ga0307482_10847402	3300030730	Hardwood Forest Soil	LLLLNAYHEPVSFRISHELHPSGWKVAFDTARPTLAVETEAVKRNRLVSLAARSFVVLSHER
Ga0302310_103881032	3300030737	Palsa	NAHHEPVSFRISHQLYPSGWKVAFDTARPTLPVEQESVKRNRHVSLAARSFVLLSHERQVDR
Ga0302310_106402601	3300030737	Palsa	GWKIVLDTARPDLPAEEQSVGRNRLVDLTERSFVVLSHDR
Ga0170824_1076996132	3300031231	Forest Soil	RISHELYALGWMVAFDTARPALPVETEAVKRNRLVSLAARSFVVLSHER
Ga0302325_122807141	3300031234	Palsa	SGWKVAFDTARPTLPLETELVKRNRLVSLAARSFVVLSHER
Ga0302325_131996221	3300031234	Palsa	HHEPVAFRISYQLYHSGWKVVFDTARPNLPLEREVVKRNRIVDMAPRSFVVLSHERQLK
Ga0302324_1006950101	3300031236	Palsa	EPVSFRISHQLYPSGWKVAFDTARPTLPLETELVKRNRLVSLAARSFVVLSHER
Ga0302324_1009328782	3300031236	Palsa	AHHERVPFRISYELYHSGWKVAFDTARPNLPIEQEVVNRNRLIDLTERSFVVLSHER
Ga0265339_104362461	3300031249	Rhizosphere	LLLNAYHEAVSFRISHELHASGWKVAFDTARPDLTVETEPVKRNRLSLAARSFVVLSHER
Ga0302326_119968542	3300031525	Palsa	VSFRISYELYHAGWKVAFDTSRPDLPLEQESVKRNRLVDLTPRSFVVLCHER
Ga0302326_134516831	3300031525	Palsa	SFRISHELHPSKWLVAFDTARPTLPVEQEAVMRNRRVSLAARSFVVLSHAR
Ga0310686_1013022612	3300031708	Soil	SYELYHSGWKIVLDTARPDLPVEDQSVGRNRLVDLTERSFVVLSHDRRPKP
Ga0307476_111487462	3300031715	Hardwood Forest Soil	EPVAFRISYELYHSGWKIVFDTARPQLPPEQESVKRNRLVDLVPRSFVLLCHDR
Ga0307474_108420391	3300031718	Hardwood Forest Soil	EIRDSAGNCAEDKDFLLLSNAHYQRVAFRISYELYHSGWKVVFDTARPDLPIEEQCVGRNRLVDLTERSFVVLSHDR
Ga0307475_103864141	3300031754	Hardwood Forest Soil	YHEPVSFRISHELHPAGWMVAFDTARPTLPVETEAVKRNRLVSLSARSFVVLSHAR
Ga0370493_0273936_23_136	3300034129	Untreated Peat Soil	VAFDTARPDLPLEREAVKRNRIVDMAPRSFVVLSHER

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063635

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences