Metagenome / Metatranscriptome Family F063619

Basic Information
Family ID	F063619
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	57 residues
Representative Sequence	LAITSSQKFLKAYNLISQGRWNTLQFKVTTDAGRLSLQSTILSGFVDSVRPQQ
Number of Associated Samples	104
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	85.27 %
% of genes from short scaffolds (< 2000 bps)	68.99 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (96.899 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (21.705 % of family members)
Environment Ontology (ENVO)	Unclassified (50.388 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (55.039 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94. 1B570J14230_101736581 2B570J29032_1090005281 3JGI25909J50240_10686773 4Ga0007756_100268145 5Ga0068877_105331271 6Ga0049081_101106873 7Ga0049081_102511943 8Ga0049080_101447241 9Ga0070743_102203182 10Ga0075471_101218093 11Ga0075471_102019013 12Ga0075471_106768351 13Ga0070749_107472461 14Ga0075464_109066841 15Ga0075473_104536542 16Ga0075458_102032852 17Ga0075458_102664732 18Ga0102862_11187473 19Ga0099850_13391931 20Ga0105745_11484713 21Ga0105747_10362101 22Ga0105748_101980961 23Ga0114341_103787631 24Ga0114343_11404703 25Ga0114841_10427064 26Ga0114337_11899121 27Ga0114363_10265651 28Ga0114363_10457931 29Ga0114363_11978123 30Ga0114363_12021293 31Ga0114364_10567361 32Ga0114876_12627981 33Ga0114880_10424201 34Ga0114880_12339941 35Ga0102831_11449933 36Ga0102860_10585183 37Ga0102815_107981502 38Ga0105098_105142732 39Ga0102812_101712643 40Ga0105104_102756891 41Ga0114979_100059017 42Ga0114976_101663361 43Ga0114972_100047081 44Ga0105082_11132252 45Ga0129333_104928451 46Ga0151620_10400651 47Ga0119931_10003851 48Ga0119931_10162483 49Ga0153799_10353142 50Ga0157498_10014516 51Ga0157600_10798497 52Ga0164293_102437281 53Ga0177922_104185113 54Ga0119946_10083523 55Ga0181363_10069324 56Ga0181363_10110811 57Ga0181363_10152751 58Ga0181350_11095111 59Ga0181362_10714733 60Ga0181362_10748691 61Ga0181365_11074801 62Ga0181352_10070411 63Ga0181352_11339821 64Ga0181352_12015932 65Ga0181356_11770023 66Ga0181358_10895951 67Ga0181358_11704071 68Ga0181349_12268052 69Ga0181346_11157963 70Ga0181348_12892731 71Ga0181355_10398074 72Ga0181355_11423233 73Ga0211726_106341501 74Ga0194116_101053473 75Ga0194125_103897563 76Ga0208235_10244191 77Ga0208359_10557912 78Ga0222714_100628211 79Ga0222713_100607601 80Ga0222713_104978211 81Ga0222713_105456803 82Ga0222712_106761282 83Ga0181353_10065024 84Ga0181354_10320921 85Ga0181351_10053961 86Ga0181351_12062181 87Ga0214919_102101263 88Ga0208160_11050022 89Ga0208783_100023029 90Ga0208783_100886303 91Ga0208644_11219293 92Ga0255170_10916901 93Ga0208897_11332481 94Ga0208974_10469283 95Ga0208974_10528261 96Ga0208942_10491333 97Ga0208975_11490802 98Ga0209297_11621913 99Ga0209134_102547652 100Ga0209107_100655913 101Ga0209107_102092871 102Ga0209985_100679541 103Ga0209990_100779723 104Ga0209668_106853352 105Ga0209400_12168093 106Ga0119944_10107813 107Ga0119945_10110813 108Ga0315291_102234933 109Ga0315907_100743501 110Ga0315288_112023621 111Ga0315285_100607611 112Ga0315285_101505783 113Ga0315904_101521344 114Ga0315904_102009214 115Ga0315904_112214511 116Ga0315294_113847571 117Ga0315274_108888731 118Ga0315289_101274964 119Ga0315905_110770901 120Ga0315903_109466992 121Ga0315277_105126101 122Ga0315295_106335511 123Ga0315276_117414123 124Ga0315275_114228083 125Ga0316617_1005710521 126Ga0334986_0215254_2_169 127Ga0334998_0536256_1_219 128Ga0335022_0130705_1_174 129Ga0335029_0336599_781_936
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94. 1B570J14230_101736581 2B570J29032_1090005281 3JGI25909J50240_10686773 4Ga0049081_101106873 5Ga0075471_106768351 6Ga0075458_102032852 7Ga0114341_103787631 8Ga0114343_11404703 9Ga0114363_10265651 10Ga0102812_101712643 11Ga0153799_10353142 12Ga0157498_10014516 13Ga0181363_10069324 14Ga0194125_103897563 15Ga0208160_11050022 16Ga0208975_11490802
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94. 1B570J14230_101736581 2B570J29032_1090005281 3JGI25909J50240_10686773 4Ga0049081_101106873 5Ga0075471_106768351 6Ga0075458_102032852 7Ga0114341_103787631 8Ga0114343_11404703 9Ga0114363_10265651 10Ga0102812_101712643 11Ga0153799_10353142 12Ga0157498_10014516 13Ga0181363_10069324 14Ga0194125_103897563 15Ga0208160_11050022 16Ga0208975_11490802
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.08% β-sheet: 3.77% Coil/Unstructured: 64.15%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF03837	RecT	0.78
PF12684	DUF3799	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG3723	Recombinational DNA repair protein RecT	Replication, recombination and repair [L]	0.78

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	3.10 %
Unclassified	root	N/A	96.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	1.55 %
Unclassified	root	N/A	96.90 %
Viruses	superkingdom	All Organisms → Viruses	1.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.55 %
Unclassified	root	N/A	96.90 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.55 %
Unclassified	root	N/A	96.90 %

Name	Rank	Taxonomy	Distribution
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	1.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.55 %
Unclassified	root	N/A	96.90 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.55 %
Unclassified	root	N/A	96.90 %
unclassified Armatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes	1.55 %

Name	Rank	Taxonomy	Distribution
Armatimonadetes bacterium Cent15-Ar3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium Cent15-Ar3	1.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.55 %
Unclassified	root	N/A	96.90 %

Scaffold	Taxonomy	Length	IMG/M Link
3300001282\|B570J14230_10173658	Not Available	605	Open in IMG/M
3300002408\|B570J29032_109000528	Not Available	563	Open in IMG/M
3300003393\|JGI25909J50240_1068677	Not Available	718	Open in IMG/M
3300004795\|Ga0007756_10026814	Not Available	2582	Open in IMG/M
3300005525\|Ga0068877_10533127	Not Available	645	Open in IMG/M
3300005581\|Ga0049081_10110687	Not Available	1020	Open in IMG/M
3300005581\|Ga0049081_10251194	Not Available	620	Open in IMG/M
3300005582\|Ga0049080_10144724	Not Available	798	Open in IMG/M
3300006641\|Ga0075471_10121809	Not Available	1391	Open in IMG/M
3300006641\|Ga0075471_10201901	Not Available	1035	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.45%
Terrestrial	Environmental → Terrestrial	1.55%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	75.97%
Marine	Environmental → Aquatic → Marine	22.48%
Soil	Environmental → Terrestrial → Soil	1.55%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	13.18%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	3.88%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.88%
Lake	Environmental → Aquatic → Freshwater → Lake	31.78%
Lentic	Environmental → Aquatic → Freshwater → Lentic	32.56%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.78%
River	Environmental → Aquatic → Freshwater → River	0.78%
Sand	Environmental → Terrestrial → Soil → Sand	0.78%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.55%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.43%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	4.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.78%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.33%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.88%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	1.55%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	8.53%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.78%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	27.91%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	23.26%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	13.18%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.43%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	4.65%
Unclassified	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic	2.33%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	10.08%
Drinking Water Treatment Plant	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Drinking Water Treatment Plant	1.55%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	3.88%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.55%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	3.88%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	2.33%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.43%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	4.65%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.33%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.33%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.78%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.78%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.78%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	1.55%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	21.71%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.88%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	3.88%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.78%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	5.43%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.55%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.78%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	6.98%
Freshwater, Surface Ice	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Surface Ice	0.78%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.78%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	8.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001282	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300004795	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005582	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF	Environmental	Open in IMG/M
3300005941	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M

Showing 1 to 10 of 104 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J14230_101736581	3300001282	Freshwater	SIGASLSYATNMSGTFTSIDPAISIPSTQKFLAAYNLISRGRWNNIQFKINTTSGSRLSLQSTILSGFVDSVRPQQ*
B570J29032_1090005281	3300002408	Freshwater	QKFLAAYNLISRGRWNNIQFKINTTSGSRLSLQSTILSGFVDSVRPQQ*
JGI25909J50240_10686773	3300003393	Freshwater Lake	ITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ*
Ga0007756_100268145	3300004795	Freshwater Lake	LSITSSQKFLKAYNLISKGRWNSIQFKVETNAGGRLSFQSAILSGFVDSVRPQQ*
Ga0068877_105331271	3300005525	Freshwater Lake	SQKFLKAYNLISKGRWNTIQFKVNTNSGGRLCLQSTILSGFVDSVRPQQ*
Ga0049081_101106873	3300005581	Freshwater Lentic	TTTAAVSLAKDMSDTFVTLDSALAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ*
Ga0049081_102511943	3300005581	Freshwater Lentic	AITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ*
Ga0049080_101447241	3300005582	Freshwater Lentic	GLSITSSQKFLKAYNLISKGRWNSVQFKVETNAGGRLSFQSAILSGFVDSVRPQQ*
Ga0070743_102203182	3300005941	Estuarine	SLAKDMSDTFVTLDSALAITSSQKFLKAYNLISQGRWNTLQFKVNADAGRLSLQSTILSGFVDSVRPQQ*
Ga0075471_101218093	3300006641	Aqueous	SRGRWNNIQFKINTTSGSRMSLQSTILSGFVDSIRPQQ*
Ga0075471_102019013	3300006641	Aqueous	ITASQKFLKAYNLISKGRWNTIQFKVNTNSGGRLCLQSTILSGFVDSVRPQQ*
Ga0075471_106768351	3300006641	Aqueous	TDYTPSVGVYYATNMSGTFTALDSSLSVSNSQKFLAAYNLISRGRWNTIQFLVQTNASTGKRMCLQSTILSGFVDSIRPQQ*
Ga0070749_107472461	3300006802	Aqueous	GTFTALDSSLSVSNSQKFLAAYNLISRGRWNTIQFLVQTNASTGKRMCLQSTILSGFVDSIRPQQ*
Ga0075464_109066841	3300006805	Aqueous	KAYNLISQGRWNTLQFKVTTDAGRLSLQSTILSGFVDSVRPQQ*
Ga0075473_104536542	3300006875	Aqueous	IDPAISIPNAQKYLTAYNLISRGRWNSIQFKINTTAGSRLSLQSTILSGFVDSVRPQQ*
Ga0075458_102032852	3300007363	Aqueous	NSQKFLAAYNLISRGRWNTIQFLVQTNASTGKRMCLQSTILSGFVDSIRPQQ*
Ga0075458_102664732	3300007363	Aqueous	GASLSYATNMSGTFTSIDPAISIPSTQKFLAAYNLISRGRWNNIQFKINTTSGSRMSLQSTILSGFVDSIRPQQ*
Ga0102862_11187473	3300007670	Estuarine	LDSALAITSSQKFLKAYNLISQGRWNTLQFKVTTDAGRLSLQSTILSGFVDSVRPQQ*
Ga0099850_13391931	3300007960	Aqueous	GTFTSIDPAISIPNAQKYLSAYNLISRGRWNSIQFKINTTAGSRLSLQSTILSGFVDSVRPQQ*
Ga0105745_11484713	3300007972	Estuary Water	MSDTFVTLDSALAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ*
Ga0105747_10362101	3300007974	Estuary Water	KAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ*
Ga0105748_101980961	3300007992	Estuary Water	TLDSALAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ*
Ga0114341_103787631	3300008108	Freshwater, Plankton	DLDSSLTITNSQKFLKAYNLISKGRWNNIQFRVQTNPNLGGRLSLQSTILSGFVDSVRPQQ*
Ga0114343_11404703	3300008110	Freshwater, Plankton	DNPYTSSNTDAAIAYSTDMSGTFTDLDSSLTITNSQKFLKAYNLISKGRWNNIQFRVQTNPNLGGRLSLQSTILSGFVDSVRPQQ*
Ga0114841_10427064	3300008259	Freshwater, Plankton	KFLKAYNLISKGRWNTIQFKVNTNSGGRLCLQSTILSGFVDSVRPQQ*
Ga0114337_11899121	3300008262	Freshwater, Plankton	ITSSQKFLKAYNLISKGRWNSIQFKVETNAGGRLSFQSAIVSGFVDSVRPQQ*
Ga0114363_10265651	3300008266	Freshwater, Plankton	RGRWNTIQFKINTTNGSRLSLQSTILSGFVDSVRPQQ*
Ga0114363_10457931	3300008266	Freshwater, Plankton	TSSQKFLKAYNLISKGRWNSVQFKVETNAGGRLSFQSAILSGFVDSVRPQQ*
Ga0114363_11978123	3300008266	Freshwater, Plankton	ITNSQKFLKAYNLISKGRWNTIQFRVQTNPNSGGRLSLQSTILSGFVDSVRPQQ*
Ga0114363_12021293	3300008266	Freshwater, Plankton	DMSGTFTDLDSSLTITNSQKFLKAYNLISKGRWNNIQFRVQTNPNSGGRLSLQSTILSGFVDSVKPQQ*
Ga0114364_10567361	3300008267	Freshwater, Plankton	LDSSLTITNSQKFLKAYNLISKGRWNNIQFRVQTNPNSGGRLSLQSTILSGFVDSVRPQQ
Ga0114876_12627981	3300008448	Freshwater Lake	GTFTDLDSSLTITNSQKFLKAYNLISKGRWNTIQFRVQTNPNSGGRLSLQSTILSGFVDSVRPQQ*
Ga0114880_10424201	3300008450	Freshwater Lake	QKYLTAYNLISRGRWNSIQFKINTTAGSRLSLQSTILSGFVDSVRPQQ*
Ga0114880_12339941	3300008450	Freshwater Lake	AISIPSTQKFLAAYNLISRGRWNNIQFKINTTSGSRMSLQSTILSGFVDSIRPQQ*
Ga0102831_11449933	3300008996	Estuarine	TSSQKFLKAYNLISQGRWNTLQFKVNADAGRLSLQSTILSGFVDSVRPQQ*
Ga0102860_10585183	3300009056	Estuarine	ATTTAAVSLAKDMSDTFVTLDSALAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ*
Ga0102815_107981502	3300009080	Estuarine	AVSLAKDMSDTFVTLDSALAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ*
Ga0105098_105142732	3300009081	Freshwater Sediment	SSIGASLSYATNMSGTFTSIDPAISIPSTQKFLAAYNLISRGRWNNIQFKINTTSGSRLSLQSTILSGFVDSVRPQQ*
Ga0102812_101712643	3300009086	Estuarine	SIPTGTFKDLKAYNLISAGRWNTMQFRIRTTAESGCRLSFQSAILSGFVDSVRPQQ*
Ga0105104_102756891	3300009168	Freshwater Sediment	GYSIQIALDNPYASSIDASLSYATNMSGTFTSIDPAISIPSTQKFLAAYNLISRGRWNNIQFKINTTSGSRLSLQSTILSGFVDSVRPQQ*
Ga0114979_100059017	3300009180	Freshwater Lake	SALAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ*
Ga0114976_101663361	3300009184	Freshwater Lake	DMSDTFVTLDSALAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ*
Ga0114972_100047081	3300009187	Freshwater Lake	TLDSALAITSSQKFLKAYNLISQGRWNTLQFKVTTDSGRLSLQSTILSGFVDSVRPQQ*
Ga0105082_11132252	3300009814	Groundwater Sand	TFVTLDSALAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ*
Ga0129333_104928451	3300010354	Freshwater To Marine Saline Gradient	ASQKFLKAYNLISKGRWNTIQFKVNTNSGGRLCLQSTILSGFVDSVRPQQ*
Ga0151620_10400651	3300011268	Freshwater	YNLISKGRWNTIQFKVNTNSGGRLCLQSTILSGFVDSVRPQQ*
Ga0119931_10003851	3300011984	Drinking Water Treatment Plant	FLKAYNLISKGRWNTIQFKVNTNSGGRMCLQSTILSGFVDSIRPQQ*
Ga0119931_10162483	3300011984	Drinking Water Treatment Plant	FLKAYNLISKGRWNTIQFKVNTNSGGRLCLQSTILSGFVDSVRPQQ*
Ga0153799_10353142	3300012012	Freshwater	VSVSYAKDMSGTFSTIDPALSITASQKFLKAYNLISKGRWNTIQFKVNTNSGGRLCLQSTILSGFVDSVRPQQ*
Ga0157498_10014516	3300012666	Freshwater, Surface Ice	ISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ*
Ga0157600_10798497	3300012719	Freshwater	VSYAKDMTGTFSTIDSGLSITSSQKFLKAYNLISKGRWNSIQFKVETNAGGRLSFQSAILSGFVDSVRPQQ*
Ga0164293_102437281	3300013004	Freshwater	TSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ*
Ga0177922_104185113	3300013372	Freshwater	ATFVTLDSALAITSSQKFLKAYNLISQGRWNTLQFKVTTDAGRLSLQSTILSGFVDSVRPQQ*
Ga0119946_10083523	3300014801	Aquatic	QNVPVSVSYAKDMSGTFSTIDPSLSITASQKFLKAYNLISKGRWNTIQFKVNTNSGGRMCLQSTILSGFVDSIRPQQ*
Ga0181363_10069324	3300017707	Freshwater Lake	WNTIQFRVQTNPNSGGRLSLQSTILSGFVDSVRPQQ
Ga0181363_10110811	3300017707	Freshwater Lake	KDMSDTFVTLDSALAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0181363_10152751	3300017707	Freshwater Lake	GTFSTIDPALNITASQKFLKAYNLISKGRWNTIQFKVNTNSGGRLCLQSTILSGFVDSVRPQQ
Ga0181350_11095111	3300017716	Freshwater Lake	LKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0181362_10714733	3300017723	Freshwater Lake	DSALAITSSQKFLKAYNLISQGRWNTLQFKVTVGAGRLSLQSTILSGFVDSVRPQQ
Ga0181362_10748691	3300017723	Freshwater Lake	RAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0181365_11074801	3300017736	Freshwater Lake	SQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0181352_10070411	3300017747	Freshwater Lake	SQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0181352_11339821	3300017747	Freshwater Lake	IDPALNITASQKFLKAYNLISKGRWNTIQFKVNTNSGGRLCLQSTILSGFVDSVRPQQ
Ga0181352_12015932	3300017747	Freshwater Lake	ISRGRWNNIQFKINTTSGSRMSLQSTILSGFVDSIRPQQ
Ga0181356_11770023	3300017761	Freshwater Lake	TLDCALAITSSQKFLNAYNLISQGRWNTLQFKVTADTGRLSLQSTILSGFVDSVRLQQ
Ga0181358_10895951	3300017774	Freshwater Lake	QGRWNTLQFKVTTDAGRLSLQSTILSGFVDSVRPQQ
Ga0181358_11704071	3300017774	Freshwater Lake	LAAYNLISRGRWNNIQFKINTTSGSRMSLQSTILSGFVDSIRPQQ
Ga0181349_12268052	3300017778	Freshwater Lake	AITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSMQSTILSGFVDSVRPQQ
Ga0181346_11157963	3300017780	Freshwater Lake	ITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0181348_12892731	3300017784	Freshwater Lake	SALAITSSQKFLKAYNLISQGRWNTLQFKVTTDAGRLSLQSTILSGFVDSVRPQQ
Ga0181355_10398074	3300017785	Freshwater Lake	LISQGRWNTLQFKVTTDAGRLSLQSTILSGFVDSVRPQQ
Ga0181355_11423233	3300017785	Freshwater Lake	FVTLDSALAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0211726_106341501	3300020161	Freshwater	NTGVTVSYAKDMSGTFSTIDPNLSITNSQKFLKAYNLISKGRWNSIQFKVETNSGGRLSFQSAILSGFVDSVRPQQ
Ga0194116_101053473	3300020204	Freshwater Lake	TTSNTTAAISLAKNMSGTFSALDSALSITNSQKFLKAYNLISQGRWNTLQFKVVTASGRLSLQSTILSGFVDSIRPQQ
Ga0194125_103897563	3300020222	Freshwater Lake	GTFSALDSALSITNSQKFLKAYNLISQGRWNTLQFKVVTASGRLSLQSTILSGFVDSIRPQQ
Ga0208235_10244191	3300020530	Freshwater	RWNNIQFKINTTSGSRLSLQSTILSGFVDSVRPQQ
Ga0208359_10557912	3300020541	Freshwater	PYASSIGASLSYATNMSGTFTSIDPAISIPSTQKFLAAYNLISRGRWNNIQFKINTTSGSRLSLQSTILSGFVDSVRPQQ
Ga0222714_100628211	3300021961	Estuarine Water	SVSNSQKFLAAYNLISRGRWNTIQFLVQTNASTGKRMCLQSTILSGFVDSIRPQQ
Ga0222713_100607601	3300021962	Estuarine Water	GRWNNIQFKINTTSGSRMSLQSTILSGFVDSIRPQQ
Ga0222713_104978211	3300021962	Estuarine Water	ITASQKFLKAYNLISKGRWNTIQFKVNTNSGGRLCLQSTILSGFVDSVRPQQ
Ga0222713_105456803	3300021962	Estuarine Water	NLSITNSQKFLKAYNLISKGRWNSIQFKVETNAGGRLSFQSAILSGFVDSVRPQQ
Ga0222712_106761282	3300021963	Estuarine Water	NLISRGRWNTIQFLVQTNASTGKRMCLQSTILSGFVDSIRPQQ
Ga0181353_10065024	3300022179	Freshwater Lake	NLISKGRWNTIQFKVNTNSGGRLCLQSTILSGFVDSVRPQQ
Ga0181354_10320921	3300022190	Freshwater Lake	ISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0181351_10053961	3300022407	Freshwater Lake	SKGRWNTIQFRVQTNPNSGGRLSLQSTILSGFVDSVRPQQ
Ga0181351_12062181	3300022407	Freshwater Lake	LDSALAITSSQKFLKAYNLISQGRWNTLQFKVTTDAGRLSLQSTILSGFVDSVRPQQ
Ga0214919_102101263	3300023184	Freshwater	DSALAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0208160_11050022	3300025647	Aqueous	IGYSIQIALDNPYTSSIGAALSFSTNMSGSFTSIDPAISIPNTQKYLAAYNLISRGRWNTIQFKINTTNGSRLSLQSTILSGFVDSVRPQQ
Ga0208783_100023029	3300025872	Aqueous	SIDPAISIPSTQKFLAAYNLISRGRWNNIQFKINTTSGSRMSLQSTILSGFVDSIRPQQ
Ga0208783_100886303	3300025872	Aqueous	ISIPSTQKFLAAYNLISRGRWNNIQFKINTTNGSRMSLQSTILSGFVDSIRPQQ
Ga0208644_11219293	3300025889	Aqueous	KYLTAYNLISRGRWNSIQFKINTTAGSRLSLQSTILSGFVDSVRPQQ
Ga0255170_10916901	3300026459	Freshwater	PYTTQNVPVSVSYAKDMSGTFSTIDPALNITASQKFLKAYNLISKGRWNTIQFKVNTNSGGRLCLQSTILSGFVDSVRPQQ
Ga0208897_11332481	3300027571	Estuarine	SLAKDMSDTFVTLDSALAITSSQKFLKAYNLISQGRWNTLQFKVNADAGRLSLQSTILSGFVDSVRPQQ
Ga0208974_10469283	3300027608	Freshwater Lentic	YTTQNVPVSVSYAKDMSGTFSTIDPALNITASQKFLKAYNLISKGRWNTIQFKVNTNSGGRLCLQSTILSGFVDSVRPQQ
Ga0208974_10528261	3300027608	Freshwater Lentic	SLAKDMSDTFVTLDSALAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0208942_10491333	3300027627	Freshwater Lentic	TSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0208975_11490802	3300027659	Freshwater Lentic	NPYTTQNTGVTVSYAKDMTGTFSTIDSGLSITSSQKFLKAYNLISKGRWNSVQFKVETNAGGRLSFQSAILSGFVDSVRPQQ
Ga0209297_11621913	3300027733	Freshwater Lake	QKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0209134_102547652	3300027764	Freshwater Lake	VSYAKDMTGTFSTIDSGLSITSSQKFLKAYNLISKGRWNSIQFKVETNAGGRLSFQSAILSGFVDSVRPQQ
Ga0209107_100655913	3300027797	Freshwater And Sediment	STTTAAVSLAKDMSDTFVTLDSALAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0209107_102092871	3300027797	Freshwater And Sediment	DTFVTLDSALAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0209985_100679541	3300027806	Freshwater Lake	TASQKFLKAYNLISKGRWNTIQFKVNTNSGGRLCLQSTILSGFVDSVRPQQ
Ga0209990_100779723	3300027816	Freshwater Lake	FSTIDPALSITASQKFLKAYNLISKGRWNTIQFKVNTNSGGRMCLQSTILSGFVDSVRPQ
Ga0209668_106853352	3300027899	Freshwater Lake Sediment	ISLAKNMSGTFSTLDSALSITNSQKFLKAYNLISQGRWNTLQFKVETTGGRLSLQSTILSGFVDSIRPQQ
Ga0209400_12168093	3300027963	Freshwater Lake	LAITSSQKFLKAYNLISQGRWNTLQFKVTTDAGRLSLQSTILSGFVDSVRPQQ
Ga0119944_10107813	3300029930	Aquatic	SSLSVTNSQKFLAAYNLISRGRWNTIQFLVQTNASTGKRMCLQSTILSGFVDSIRPQQ
Ga0119945_10110813	3300029933	Aquatic	NTIQFKVQTQENQGGRLCFQSAILSGFVDSIRPQQ
Ga0315291_102234933	3300031707	Sediment	LISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0315907_100743501	3300031758	Freshwater	MSGTFSTIDPALSITASQKFLKAYNLISKGRWNTIQFKVNTNSGGRMCLQSTILSGFVDSIRPQQ
Ga0315288_112023621	3300031772	Sediment	TTAEVSLAKDMSDTFVTLDSALAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0315285_100607611	3300031885	Sediment	FLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0315285_101505783	3300031885	Sediment	LDSALAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSMQSTILSGFVDSVRPQQ
Ga0315904_101521344	3300031951	Freshwater	NLISRGRWNNIQFKINTTSGSRMSLQSTILSGFVDSIRPQQ
Ga0315904_102009214	3300031951	Freshwater	NLISRGRWNTIQFKINTTNGSRLSLQSTILSGFVDSVRPQQ
Ga0315904_112214511	3300031951	Freshwater	DPNLSITNSQKFLKAYNLISKGRWNSIQFKVETNSGGRLSFQSAIVSGFVDSVRPQQ
Ga0315294_113847571	3300031952	Sediment	KAYNLISQGRWNTLQFKVTSDAGRLSLQSTILSGFVDSVRPQQ
Ga0315274_108888731	3300031999	Sediment	SSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0315289_101274964	3300032046	Sediment	LAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0315905_110770901	3300032092	Freshwater	RWNNIQFKINTTSGSRMSLQSTILSGFVDSIRPQQ
Ga0315903_109466992	3300032116	Freshwater	DMSGTFTDLDSSLTITNSQKFLKAYNLISKGRWNNIQFRVQTNPNSGGRLSLQSTILSGFVDSVKPQQ
Ga0315277_105126101	3300032118	Sediment	GRWNTLQFKVTADADRLSLQSTILSGFVDSVRPQQ
Ga0315295_106335511	3300032156	Sediment	VSLAKDMSDTFVTLDSALAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0315276_117414123	3300032177	Sediment	MSDTFVTLDSALAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0315275_114228083	3300032401	Sediment	LKAYNLISQGRWNTLQFKVTSDAGRLSLQSTILSGFVDSVRPQQ
Ga0316617_1005710521	3300033557	Soil	QIALDNPYATSIGASLSYATNMSGTFTSIDPAISIPSTQKFLAAYNLISRGRWNNIQFKINTTSGSRMSLQSTILSGFVDSIRPQQ
Ga0334986_0215254_2_169	3300034012	Freshwater	SALAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0334998_0536256_1_219	3300034019	Freshwater	ASISLAKNMSGTFSTLDSALSITNSQKFLKAYNLISQGRWNTMQFKVETTGGRLSLQSTILSGFVDSVRPQQ
Ga0335022_0130705_1_174	3300034095	Freshwater	LDSALAITSSQKFLKAYNLISQGRWNTLQFKVTADAGRLSLQSTILSGFVDSVRPQQ
Ga0335029_0336599_781_936	3300034102	Freshwater	TSSQKFLKAYNLISKGRWNSIQFKVETNAGGRLSFQSAILSGFVDSVRPQQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063619

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences