NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F063580

Metagenome / Metatranscriptome Family F063580

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F063580
Family Type Metagenome / Metatranscriptome
Number of Sequences 129
Average Sequence Length 52 residues
Representative Sequence LAFTVLGLVLLLAGIDEFSNPRLRAEKKPRRGWLRMLFGGRLAVREEGA
Number of Associated Samples 117
Number of Associated Scaffolds 129

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.78 %
% of genes near scaffold ends (potentially truncated) 98.45 %
% of genes from short scaffolds (< 2000 bps) 92.25 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (86.047 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(25.581 % of family members)
Environment Ontology (ENVO) Unclassified
(27.907 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(58.915 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 42.86%    β-sheet: 0.00%    Coil/Unstructured: 57.14%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 129 Family Scaffolds
PF00005ABC_tran 74.42
PF08352oligo_HPY 20.16
PF13555AAA_29 1.55
PF00044Gp_dh_N 0.78
PF00232Glyco_hydro_1 0.78
PF00266Aminotran_5 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 129 Family Scaffolds
COG0057Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenaseCarbohydrate transport and metabolism [G] 0.78
COG2723Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidaseCarbohydrate transport and metabolism [G] 0.78


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms86.82 %
UnclassifiedrootN/A13.18 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908045|KansclcFeb2_ConsensusfromContig515682All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia735Open in IMG/M
3300000363|ICChiseqgaiiFebDRAFT_10606580All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia615Open in IMG/M
3300000956|JGI10216J12902_103174896All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300000956|JGI10216J12902_106687867All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300002568|C688J35102_119649250All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia740Open in IMG/M
3300004081|Ga0063454_101003746All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia672Open in IMG/M
3300004114|Ga0062593_101579525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi711Open in IMG/M
3300004156|Ga0062589_102465247All Organisms → cellular organisms → Bacteria → Terrabacteria group538Open in IMG/M
3300004156|Ga0062589_102695680All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia517Open in IMG/M
3300004157|Ga0062590_101316455All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300004479|Ga0062595_101407112All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia636Open in IMG/M
3300004480|Ga0062592_100227891All Organisms → cellular organisms → Bacteria1343Open in IMG/M
3300004643|Ga0062591_101966817All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300005166|Ga0066674_10103388All Organisms → cellular organisms → Bacteria1324Open in IMG/M
3300005334|Ga0068869_100878844All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi775Open in IMG/M
3300005343|Ga0070687_100792625All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300005355|Ga0070671_100530945All Organisms → cellular organisms → Bacteria1014Open in IMG/M
3300005365|Ga0070688_100071942All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2215Open in IMG/M
3300005444|Ga0070694_100883577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. CNS-004737Open in IMG/M
3300005450|Ga0066682_10338245All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi970Open in IMG/M
3300005456|Ga0070678_102101714All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300005456|Ga0070678_102278365All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300005468|Ga0070707_101049119Not Available781Open in IMG/M
3300005471|Ga0070698_100436484Not Available1244Open in IMG/M
3300005535|Ga0070684_100740193All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300005549|Ga0070704_101329761All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi658Open in IMG/M
3300005554|Ga0066661_10672990All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia609Open in IMG/M
3300005560|Ga0066670_10996312All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300005576|Ga0066708_10928902All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300005578|Ga0068854_101443635All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia623Open in IMG/M
3300005614|Ga0068856_100812151All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi955Open in IMG/M
3300005713|Ga0066905_101324686All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300005897|Ga0075281_1083244All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300006755|Ga0079222_10342503All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1004Open in IMG/M
3300006796|Ga0066665_10580969All Organisms → cellular organisms → Bacteria905Open in IMG/M
3300006806|Ga0079220_11834435All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300006844|Ga0075428_101167906All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300006844|Ga0075428_101817155All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300006881|Ga0068865_101171990All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300006954|Ga0079219_10018184All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2543Open in IMG/M
3300006954|Ga0079219_12444672All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia507Open in IMG/M
3300009100|Ga0075418_12082613All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300009137|Ga0066709_102895944All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia633Open in IMG/M
3300009176|Ga0105242_11512002All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia702Open in IMG/M
3300010037|Ga0126304_10671329All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia700Open in IMG/M
3300010041|Ga0126312_10019068All Organisms → cellular organisms → Bacteria4580Open in IMG/M
3300010301|Ga0134070_10181973All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia764Open in IMG/M
3300010326|Ga0134065_10116505All Organisms → cellular organisms → Bacteria903Open in IMG/M
3300010333|Ga0134080_10155102All Organisms → cellular organisms → Bacteria973Open in IMG/M
3300010333|Ga0134080_10353487All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia670Open in IMG/M
3300010333|Ga0134080_10437092All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia611Open in IMG/M
3300010335|Ga0134063_10391967All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia680Open in IMG/M
3300010364|Ga0134066_10193893All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia669Open in IMG/M
3300010373|Ga0134128_11358175All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300010399|Ga0134127_11997737All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia658Open in IMG/M
3300010400|Ga0134122_12058614All Organisms → cellular organisms → Bacteria → Terrabacteria group611Open in IMG/M
3300012198|Ga0137364_10737733All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300012204|Ga0137374_10839142All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia679Open in IMG/M
3300012212|Ga0150985_113268360All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1298Open in IMG/M
3300012212|Ga0150985_117572367Not Available733Open in IMG/M
3300012350|Ga0137372_10622433All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia789Open in IMG/M
3300012354|Ga0137366_10254190Not Available1302Open in IMG/M
3300012510|Ga0157316_1038690Not Available612Open in IMG/M
3300012901|Ga0157288_10060832Not Available914Open in IMG/M
3300012904|Ga0157282_10278502Not Available579Open in IMG/M
3300012910|Ga0157308_10107013All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia834Open in IMG/M
3300012914|Ga0157297_10070355All Organisms → cellular organisms → Bacteria975Open in IMG/M
3300012915|Ga0157302_10214770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia699Open in IMG/M
3300012957|Ga0164303_10327634All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300012958|Ga0164299_11198967All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia574Open in IMG/M
3300012960|Ga0164301_10234999All Organisms → cellular organisms → Bacteria1193Open in IMG/M
3300012972|Ga0134077_10318091All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia657Open in IMG/M
3300012988|Ga0164306_10762256All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia775Open in IMG/M
3300013102|Ga0157371_11661633Not Available501Open in IMG/M
3300013296|Ga0157374_11796709All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300014157|Ga0134078_10293606All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia697Open in IMG/M
3300014166|Ga0134079_10078161All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1223Open in IMG/M
3300015371|Ga0132258_11308162All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1832Open in IMG/M
3300015374|Ga0132255_103046953All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia715Open in IMG/M
3300017659|Ga0134083_10177040All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Aeromonadales → Aeromonadaceae → Aeromonas → Aeromonas schubertii873Open in IMG/M
3300018028|Ga0184608_10507414All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → unclassified Nitrospinota → Nitrospinae bacterium SCGC AAA008-D05515Open in IMG/M
3300018067|Ga0184611_1059322All Organisms → cellular organisms → Bacteria1287Open in IMG/M
3300018083|Ga0184628_10468014All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia656Open in IMG/M
3300018431|Ga0066655_10720890All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia676Open in IMG/M
3300018465|Ga0190269_11811021All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria521Open in IMG/M
3300019869|Ga0193705_1009593All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum2116Open in IMG/M
3300019886|Ga0193727_1172158Not Available565Open in IMG/M
3300020082|Ga0206353_10112911Not Available568Open in IMG/M
3300021080|Ga0210382_10465620All Organisms → cellular organisms → Bacteria → Terrabacteria group560Open in IMG/M
3300021344|Ga0193719_10365361All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia599Open in IMG/M
3300025922|Ga0207646_10739530Not Available878Open in IMG/M
3300025944|Ga0207661_11411082All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia639Open in IMG/M
3300025945|Ga0207679_10976462All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300026010|Ga0207999_1010587All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia816Open in IMG/M
3300026023|Ga0207677_10810982All Organisms → cellular organisms → Bacteria838Open in IMG/M
3300026078|Ga0207702_10655201All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex → Burkholderia ambifaria → Burkholderia ambifaria MEX-51033Open in IMG/M
3300026118|Ga0207675_100105597All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi2655Open in IMG/M
3300026306|Ga0209468_1081732All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. CNS-0041076Open in IMG/M
3300026550|Ga0209474_10027538All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi4305Open in IMG/M
3300027765|Ga0209073_10450502All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300027821|Ga0209811_10043924All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1512Open in IMG/M
3300027857|Ga0209166_10624407All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia546Open in IMG/M
3300027882|Ga0209590_10094647All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1773Open in IMG/M
3300028707|Ga0307291_1003116All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum3583Open in IMG/M
3300028707|Ga0307291_1016121All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1665Open in IMG/M
3300028712|Ga0307285_10223720Not Available531Open in IMG/M
3300028716|Ga0307311_10082962Not Available882Open in IMG/M
3300028718|Ga0307307_10033350All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1470Open in IMG/M
3300028718|Ga0307307_10097035All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Coleoptera → Polyphaga → Elateriformia → Elateroidea → Lampyridae → Luciolinae → Abscondita → Abscondita terminalis896Open in IMG/M
3300028722|Ga0307319_10128474All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia818Open in IMG/M
3300028744|Ga0307318_10324135Not Available541Open in IMG/M
3300028755|Ga0307316_10125639All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia905Open in IMG/M
3300028755|Ga0307316_10402649Not Available507Open in IMG/M
3300028771|Ga0307320_10029032All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum2012Open in IMG/M
3300028791|Ga0307290_10197372All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300028799|Ga0307284_10002714All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → Thermobaculum4692Open in IMG/M
3300028802|Ga0307503_10727324All Organisms → cellular organisms → Bacteria → Terrabacteria group560Open in IMG/M
3300028810|Ga0307294_10026471All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1569Open in IMG/M
3300028828|Ga0307312_10969658All Organisms → cellular organisms → Bacteria → Terrabacteria group563Open in IMG/M
3300028875|Ga0307289_10229357All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia764Open in IMG/M
3300028878|Ga0307278_10241905All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia801Open in IMG/M
3300028881|Ga0307277_10013064All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi3210Open in IMG/M
3300028881|Ga0307277_10047208All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1750Open in IMG/M
3300032013|Ga0310906_11022709All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia595Open in IMG/M
3300032133|Ga0316583_10152867All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia803Open in IMG/M
3300032205|Ga0307472_101246563All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia713Open in IMG/M
3300032770|Ga0335085_10304338All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1888Open in IMG/M
3300032783|Ga0335079_12279456Not Available515Open in IMG/M
3300033550|Ga0247829_11790010Not Available506Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil25.58%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.30%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil8.53%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.43%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.88%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.88%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.88%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.33%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.33%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.33%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.33%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.33%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.55%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.55%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.55%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.55%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.55%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.55%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.55%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.55%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.55%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.55%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.55%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.78%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.78%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.78%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.78%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.78%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.78%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.78%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.78%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908045Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011EnvironmentalOpen in IMG/M
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005897Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_103EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012510Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.9.old.080610Host-AssociatedOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012904Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1EnvironmentalOpen in IMG/M
3300012910Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2EnvironmentalOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300019869Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026010Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_103 (SPAdes)EnvironmentalOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028707Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148EnvironmentalOpen in IMG/M
3300028712Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139EnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028810Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032133Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrAHost-AssociatedOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
KansclcFeb2_107522402124908045SoilAFTVLGLVLLLAGIDEFTNPRLRAEKKPRRGRLRMLFGGRLAVREEGA
ICChiseqgaiiFebDRAFT_1060658013300000363SoilGAALAFTVLGLVLILAGIDEVSNPRLRTEKVERGNLLRTLAGGRLAATRKKAA*
JGI10216J12902_10317489623300000956SoilWWPFFFPGAALAFTVLGLVLLLAGIDEVSNPRLRTERAGRRRLLGLRGGGRAAPQSEGSA
JGI10216J12902_10668786713300000956SoilFTVLGLVLLLAGIDEFTNPRLRSERKPRRHRLRYLLGGKLAVPEESLS*
C688J35102_11964925013300002568SoilWWPFFFPGAALAFTVLALVLVLAGIDEVSNPRLRKEKTRKRVGNRMVAALFGGRSVRSAEEAA*
Ga0063454_10100374613300004081SoilFTVLGLVLILAGIDEVSNPRLRTERVGRRRLFGMLFGGRAAARAETTS*
Ga0062593_10157952513300004114SoilGLVLLLAGIDEFTNPRLRSEKKPRRHRLRMLFGGRLAVREEGAS*
Ga0062589_10246524723300004156SoilLLLAGIDEFTNPRLRAEKKPRRHRLRFLLGGKLAVPEEGVS*
Ga0062589_10269568023300004156SoilAALAFTVLGLVLILAGIDEFSNPRLRTERAGRRRLLGMIFGSRLVAPPTETSA*
Ga0062590_10131645523300004157SoilGLVLLLAGIDEFTNPRLRAEKKPRRHRLRFLLGGKLAVPEEGVS*
Ga0062595_10140711213300004479SoilVLGLVLLLAGIDEFTNPRLRTEKKAHRSRLRTLFGGSLASRGEAA*
Ga0062592_10022789133300004480SoilLAFTVLGLVLLLAGIDEFTNPRLRSEQKPRRHRLRYLLGGKLAVREEGVS*
Ga0062591_10196681723300004643SoilGEWWPFFFPGAALAFTVLGLVLLLAGIDEFTNPRLRAEKKPRRHRLRFLLGGKLAVPEEGVS*
Ga0066674_1010338813300005166SoilLVLLLAGIDEFTNPRLRSEHKPHRSRLRMLFGGRLATREEGVS*
Ga0068869_10087884423300005334Miscanthus RhizosphereLAFTVLGLVLLLAGIDEFTNPRLRAEKKPRRHRLRFLLGGKLAVPEEGVS*
Ga0070687_10079262523300005343Switchgrass RhizosphereLAFTVLGLVLLLAGIDEFSNPRLRAEKKPRRGWLRMLFGGRLAVREEGA*
Ga0070671_10053094513300005355Switchgrass RhizosphereWWPFFFPGAALAFTVLGLVLILAGIDEVSNPRLRTEKVERENPLRTLAVGRLATARKKAA
Ga0070688_10007194213300005365Switchgrass RhizosphereLAFTVLGLVLLLAGIDEFTNPRLRAEKKPRRHRLRFLFGGKLAVPEEGVS*
Ga0070694_10088357713300005444Corn, Switchgrass And Miscanthus RhizosphereLLLAGIDEFTNPRLRAEKKPRRHRLRFLFGGKLAVPEEGVS*
Ga0066682_1033824523300005450SoilGLVLLLAGIDEFTNPRLRSEHKPHRSRLRMLFGGRLATREEGVS*
Ga0070678_10210171413300005456Miscanthus RhizospherePFFFPGAALAFTVLGLVLILAGIDEVSNPRLRTEKVERGNLLRTLAGGRLAATRKKAA*
Ga0070678_10227836523300005456Miscanthus RhizosphereFFFPGAALAFTVLGLVLLLAGIDEFTNPRLRAEKKPRRHRLRFLLGGKLAVPEEGVS*
Ga0070707_10104911923300005468Corn, Switchgrass And Miscanthus RhizosphereLAFTVLGLVLVLAGIDEFSNPRLRTERTARRRLLGTLFAGRFVARPETSS*
Ga0070698_10043648413300005471Corn, Switchgrass And Miscanthus RhizosphereFTVLGLVLVLAGIDEVSNPRLRVERAQRRRLVSLLVGGRALARAEGAV*
Ga0070684_10074019323300005535Corn RhizosphereEWWPFFFPGAALAFTVLGLVLILAGIDEVSNPRLRTEKVERENPLRTLAVGRLATARKKAA*
Ga0070704_10132976123300005549Corn, Switchgrass And Miscanthus RhizosphereVLGLVLLLAGIDEFTNPRLRAEKKPRRHRLRFLLGGKLAVPEEGVS*
Ga0066661_1067299023300005554SoilTVLGLVLVLAGIDELSNPRLRTERVRRRRLLGMLVGGRFVSRAEASA*
Ga0066670_1099631223300005560SoilWWPFFFPGAALAFTVLGLVLLLAGIDEVSNPRLRTERPPRRRLVALLIGGRA*
Ga0066708_1092890223300005576SoilFPGAALAFTVLGLVLRLAGIDEVSNPRLRTERPERRRWVAALVGGRWVARAEGAA*
Ga0068854_10144363513300005578Corn RhizosphereLLAGIDEFTNPRLRAEKKPRRHRLRFLLGGKLAVPEEGVS*
Ga0068856_10081215123300005614Corn RhizosphereLVLLLAGIDEFTNPRLRAEKKPRRHRLRFLLGGKLAVPEEGVS*
Ga0066905_10132468623300005713Tropical Forest SoilLVLLLAGIDEFTNPRLRAERKPRRRYLRTLFGGRLAEREEVKA*
Ga0075281_108324413300005897Rice Paddy SoilVLGLVLLLAGIDELSNPRLRTEGRPRRHLLALLGGRALARAGGRA*
Ga0079222_1034250323300006755Agricultural SoilDEFTNPRLRSERKPRRHRLRFLLGGKLAVPEESVS*
Ga0066665_1058096923300006796SoilAALAFTVLGLVLLLAGIDAVSNPRLRTERPERRRLLATLVGGRLVARPERAEASA*
Ga0079220_1183443513300006806Agricultural SoilFPGAALAFTVLGLVLVLTGIDEVSNPRLRTERTRRRLGSRMVAALFGGRAVRSAEEPA*
Ga0075428_10116790623300006844Populus RhizosphereLGLVLLLAGIDEFTNPRLRAERKPRRGYLRTLFGGRLAAPEERPA*
Ga0075428_10181715523300006844Populus RhizosphereFFFPGAALAFTVLGLVLLLAGIDEFTNPRLRAERKPRRGHLRTLFGGRLAEREEGRA*
Ga0068865_10117199013300006881Miscanthus RhizosphereGAALAFTVLGLVLLLAGIDELTNPRLRAEKKPRRHRLRFLLGGKLAVPEEGVS*
Ga0079219_1001818413300006954Agricultural SoilGAALAFTVLGLVLLLAGIDEFTNPRLRSEQKPRRHRNRLRMLFGGRLAVREEGVS*
Ga0079219_1244467223300006954Agricultural SoilWPFFFPGAGLAFTVLGLVLVLAGIDEVSNPRLRTEKRERRRIGRLLVGGRLAVKGGTA*
Ga0075418_1208261323300009100Populus RhizosphereWPFFFPGAALAFTVLGLVLLLAGIDEFTNPRLRAERKPRRGYLRTLFGGRLAAPEERPA*
Ga0066709_10289594413300009137Grasslands SoilGIDEFTNPRLRSEHKPHRNRLRMLFGGRLATREEGVS*
Ga0105242_1151200213300009176Miscanthus RhizosphereLAFTVLALVLVLAGIDEVSNPRLRTEKTRKHVANRMRAALFGGRSVRSAGEAA*
Ga0126304_1067132923300010037Serpentine SoilFFFPGAALAFTVLGLVLLLAGIDEFTNPRLRSERKPRRRRLRMLFGGRPMAAEDVR*
Ga0126312_1001906863300010041Serpentine SoilVLGLVLVLAGIDEVSNPRLRTERTPRRRLLRMFVGGRPIARTETPA*
Ga0134070_1018197313300010301Grasslands SoilTVLGLVLLLAGIDEVSNPRLRTERPPRRRVFATLFGGRLVARPEASA*
Ga0134065_1011650523300010326Grasslands SoilAGIDGFTNPRLRSEHKPHRSRLRMLFGGRLATREEGVS*
Ga0134080_1015510233300010333Grasslands SoilFPGAALAFTVLGLVLLLAGIDEVSNPRLRAERKERRRLLGTLFGGRLVARPEVSA*
Ga0134080_1035348723300010333Grasslands SoilLAFTVLGLVLLLAGIDEVSNPRLRTERTRRRRLLGLLVGGRFVARAEAST*
Ga0134080_1043709223300010333Grasslands SoilAALAFTVLGLVLLLAGIDEVSNPRLRTERPERRRLLATLVGGRLVARPERAEASA*
Ga0134063_1039196723300010335Grasslands SoilLGLVLLLAGIDEFSNPRLRTERTERRRLLRMLVGGRLAARAEAST*
Ga0134066_1019389323300010364Grasslands SoilVFPGAALAFTVLGLVLLLAGIDEVSNPRLRTERPPRRRVFATLFGGRLVARPEASA*
Ga0134128_1135817513300010373Terrestrial SoilFFFPGAALALTVLGLVLVLAGIDEVSNPRLRTERAPRRHRLLPLLLGGRAWVRA*
Ga0134127_1199773723300010399Terrestrial SoilAFTVLGLVLLLAGIDEVSNPRLRAEKAPRRHLIRQLFGGRLATRAEASA*
Ga0134122_1205861423300010400Terrestrial SoilAMLAFTVLGLVLLLAGIDEFSNPRLRAEKKPRRGWLRMLFGGRLAVREEGA*
Ga0137364_1073773323300012198Vadose Zone SoilFPWAALAFTVLGLVLLLAGIDEVSNPRLRTERPPRRRVFATLFGGRLVARPEASA*
Ga0137374_1083914213300012204Vadose Zone SoilEGWPFFFPGAALAFTVLGLVLLLAGIDEVSNPRLRTERTGRRRLLGMLLGGRALARPKVST*
Ga0150985_11326836033300012212Avena Fatua RhizosphereGAALAFTVLALVLVLAGIDEVSNPRLRKEKTRKRVGNRMMAALFGGRAVRSAEEAA*
Ga0150985_11757236713300012212Avena Fatua RhizosphereALAFTVLALVLVLAGIDEVSNPRLRTEKTRKRVGNRMVAALFGGRSVRSAEEAA*
Ga0137372_1062243313300012350Vadose Zone SoilEWWPFFFPGAALAFTVLGLVLVLAGIDEVSNPRLRTERVRRRRLLALFVGGRAVARAESPA*
Ga0137366_1025419013300012354Vadose Zone SoilEWWPFFFPGAALAFTVLGLVLILAGIDEVSNPRLRTEKTERRRPLRALFRGRLVTRTSP*
Ga0157316_103869013300012510Arabidopsis RhizosphereMRNAIGLVLLLAGIDEVSNPRLRTERVGRRRFRGGARSAARSGGSA*
Ga0157288_1006083223300012901SoilLLAGIDEFTNPRLRSEQKPRRHRLRYLLGGKLAVREEGVS*
Ga0157282_1027850213300012904SoilQGEWWPFFFPGAALAFTVLGLVLLLTGIDEFTNPRLRAEKKPRRGRLRMLFGGRLAVREDGA*
Ga0157308_1010701313300012910SoilTVLQGEWWPFFFPGAALAFTVLGLVLLLTGIDEFTNPRLRAEKKPRRGRLRMLFGGRLAVREDGA*
Ga0157297_1007035523300012914SoilVLGLVLLLTGIDEFTNPRLRAEKKPRRGRLRMLFGGRLAVREDGA*
Ga0157302_1021477013300012915SoilAALAFTVLGLVLLLAGIDEFTNPRLRSEKKPRRHRLRMLFGGRLAVREEGAS*
Ga0164303_1032763423300012957SoilEWWPFFFPGAMLAFTVLGLVLLLAGIDEFTNPRLRAEKKPRRGALRMLFGGRLAVREEGA
Ga0164299_1119896723300012958SoilAALAFTVLGLVLLLAGIDEFTNPRLRTEKKPRRGSLRMLFGGRLSVREDGA*
Ga0164301_1023499923300012960SoilGLVLLLAGIDEFTNPRLRAEKKPRRGGLRMLFGGRLAVREEGA*
Ga0134077_1031809113300012972Grasslands SoilGAALAFTVLGLVLLLAGIDEVSNPRLRTERTRRRRLLGLLVGGRFVARAEAST*
Ga0164306_1076225613300012988SoilLAFTVLGLVLLLAGIDEFTNPRLRAEKKPRRGALRMLFGGRLAVREDGA*
Ga0157371_1166163323300013102Corn RhizosphereGIDEFTNPRLRAEKKPRRHRLRFLLGGKLAVPEEGVS*
Ga0157374_1179670923300013296Miscanthus RhizosphereFFFPGAALAFTVLALVLVLAGIDEVSNPRLRTEKTSKRVTGRMRAALFGGRTVRSAGEAV
Ga0134078_1029360613300014157Grasslands SoilAFTVLGLVLLLAGIDEVSNPRLRTERTQRRRVFALLIGGRGVARRAEASA*
Ga0134079_1007816123300014166Grasslands SoilFVFPGAALAFTVLGLVLLLAGIDEVSNPRLRTERPPRRRVFATLFGGRLVARPEASA*
Ga0132258_1130816213300015371Arabidopsis RhizosphereFFFPGAALAFTVLGLVLILAGIDEVSNPRLRTERTQRRRLLGTLVGGRFAARPEAST*
Ga0132255_10304695323300015374Arabidopsis RhizosphereAALAFTVLGLVLLLAGIDELSNPRLRTERTRRRRLLRLVGGGRDAARAKGSA*
Ga0134083_1017704023300017659Grasslands SoilVLGLVLLLAGIDEFTNPRLRSEHKPHRSRLRMLFGGRLATREEGVS
Ga0184608_1050741413300018028Groundwater SedimentWWPFFFPGAALAFTVLGLVLLLAGIDEVSNPRLRAERKERRRLLGTLLGGRLVPRAEGAR
Ga0184611_105932233300018067Groundwater SedimentFTVLGLVLLLAGIDEFTNPRLRAEKKPRRGHLRVLFGGRAAVREEGA
Ga0184628_1046801423300018083Groundwater SedimentQGEWWPFFFPGAALAFTVLGLVLLLTGIDEFTNPRLRAEKKPRRGHLRMLFGGRAAVREEGA
Ga0066655_1072089013300018431Grasslands SoilTVLGLVLLLAGIDEVSNPRLRTERRQRRRLLLALVGGRLAARAEAAA
Ga0190269_1181102113300018465SoilLVLLLTGIDEFTNPRLRAEKKPRRGRLRMLFGGRLAVREDGA
Ga0193705_100959333300019869SoilFFFPGAALAFTVLGLVLILAGIDEVSNPRLRTEKAGRGNLLRTLAVGRLATARKKAA
Ga0193727_117215823300019886SoilVLQGEWWPFFFPGAMLAFTVLGLVLLLAGIDEFTNPRLRAEKKPRRGHLRMLFGGRAAVREEGA
Ga0206353_1011291113300020082Corn, Switchgrass And Miscanthus RhizospherePFFFPGLALALTVLGLVFLLAGIDEVSNPRLRAEVRRHWLRGLFVGHRPAWRAAEEAA
Ga0210382_1046562013300021080Groundwater SedimentFTVLGLVLVLAGIDEVSNPRLRSERTKRRRLVGMLLGGRMVARPEVSA
Ga0193719_1036536123300021344SoilPGAALAFTVLGLVLLLAGIDEVSNPRLRTERTKRRRLLTLLVGGRLVARAEGSA
Ga0207646_1073953013300025922Corn, Switchgrass And Miscanthus RhizosphereHGEREWWPFFFPGAALAFTVLGLVLVLAGIDEVSNPRLRVERAQRRRLLSLLVGGRALARAEGAV
Ga0207661_1141108223300025944Corn RhizosphereAALAFTVLGLVLVLAGIDEVSNPRLRTERTARRGAIRTLFGGRLFTRAEPST
Ga0207679_1097646213300025945Corn RhizospherePGAALAFTVLGLVLLLAGIDEFTNPRLRTQQKPRTGRLRTLFTGRLGEREESST
Ga0207999_101058713300026010Rice Paddy SoilVLGLVLLLAGIDELSNPRLRTEGRPRRHLLALLGGRALARAGGRA
Ga0207677_1081098213300026023Miscanthus RhizosphereQGEWWPFFFPGAALAFTVLGLVLLLAGIDEFTNPRLRAEKKPRRHRLRFLLGGKLAVPEEGVS
Ga0207702_1065520123300026078Corn RhizosphereFTVLGLVLLLAGIDEFTNPRLRAEKKPRRHRLRFLLGGKLAVPEEGVS
Ga0207675_10010559743300026118Switchgrass RhizosphereQGEWWPFFFPGAALAFTVLGLVLLLTGIDEFTNPRLRAEKKPRRGRLRMLFGGRLAVREDGA
Ga0209468_108173213300026306SoilFTVLGLVLLLAGIDEVSNPRLRTERPPRRRVFATLFGGRLVARPEASA
Ga0209474_1002753813300026550SoilPGAALAFTVLGLVLLLAGIDEVSNPRLRTDRAPRRRVFAALFGGRLAAEAEARA
Ga0209073_1045050223300027765Agricultural SoilFPGAALAFTVLGLVLVLTGIDEVSNPRLRTERTRRRLGSRMVAALFGGRAVRSAEEPA
Ga0209811_1004392413300027821Surface SoilMLAFTVLGLVLLLAGIDEFTNPRLRTEKKPRRGSLRMLFGGRLSVREDGA
Ga0209166_1062440713300027857Surface SoilPFFFPGAALALTVFGLVLVLAGIDEVSNPRLRSERAPRHWFRRLLELFVGGRALRRAEVQ
Ga0209590_1009464713300027882Vadose Zone SoilWWPFFFPGAALAFTVLGLVLVLAGIDEVSNPRLRTERIRRRRLLALFVGGRAVARAEASV
Ga0307291_100311643300028707SoilFFFPGAALAFTVLGLVLILAGIDEVSNPRLRTEKVERGNLLRTLAVGRLATARKKAA
Ga0307291_101612113300028707SoilPGAALAFTVLALVLVLAGIDEVSNPRLRTEKTRKRVGNRMVAALFGGRSVRSAGEAA
Ga0307285_1022372013300028712SoilFTVLGLVLLLAGIDEFTNPRLRAEKKPRRGHLRMLFGGRVAVREESA
Ga0307311_1008296223300028716SoilFPGAALAFTVLGLVLLLAGIDEVSNPRLRNERKPRRGLLRQLFGGRLATRAETST
Ga0307307_1003335013300028718SoilGLVLLLAGIDEFTNPRLRAEKKPRRGHLRMLFGGRVAVREEGA
Ga0307307_1009703523300028718SoilLLLAGIDEFTNPRLRTEKKPRRGSLRMLFGGRLSVREDGA
Ga0307319_1012847413300028722SoilLGLVLLLAGIDEVSNPRLRAERKVRRRLLGTLLGGRFAARPEAAR
Ga0307318_1032413523300028744SoilFFPGAALAFTVLGLVLLLAGIDEFTNPRLRTEHKTHRGRLRTLFGGSLASRGEAA
Ga0307316_1012563913300028755SoilFPGAALAFTVLGLVLLLAGIDEFSNPRLRAEKKPRRGRLRMLFGGRLAVREESA
Ga0307316_1040264913300028755SoilGAALAFTVLGLVLLLAGIDEFTNPRLRTEHKTHRGRLRTLFGGSLASRGEAA
Ga0307320_1002903233300028771SoilGAALAFTVLGLVLLLAGIDEVSNPRLRNERKPRRGLLRQLFGGRLATRAETST
Ga0307290_1019737213300028791SoilFTVLGLVLLLAGIDEFTNPRLRTERKTHRGRLRTLFGGSLASRGEAA
Ga0307284_1000271413300028799SoilPFFFPGAALAFTVLGLVLILAGIDEVSNPRLRTEKAGRGNLLRTLAVGRLATARKKAA
Ga0307503_1072732413300028802SoilFTVLGLVLLLAGIDEFTNPRLRAEKKPRRGHLRMLFGGRAAVREEGT
Ga0307294_1002647133300028810SoilAMLAFTVLGLVLLLAGIDEFTNPRLRAEKKPRRGHLRMLFGGRVAVREEGA
Ga0307312_1096965813300028828SoilWPFFFPGAALAFTVLGLVLVLAGIDEVSNPRLRSERTKRRRLVGMLLGGRLVARPEVSA
Ga0307289_1022935713300028875SoilFPGAALAFTVLGLTLVLAGIDEVSNPRLRTERVARRGALKTLLGGRLFTRAEPST
Ga0307278_1024190523300028878SoilFFPGAALAFTVLGLVLVLAGIDEVSNPRLRSERTKRRRLVGMLLGGRLVARPEVSA
Ga0307277_1001306443300028881SoilALAFTVLCLVLLLAGIDEVSNPRLRNERMPRRGLFRQLFGGRLATRAETSA
Ga0307277_1004720813300028881SoilPFFFPGAALAFTVLGLVLLLAGIDEVSNPRLRAERAPRRRLLRQLFGGRLAARAEASA
Ga0310906_1102270913300032013SoilGIDEFTNPRLRAEKKPRRGRLRMLFGGRLAVREDGA
Ga0316583_1015286723300032133RhizospherePFFFPSLALSFTVLGLVLVLAGIDELSNPRLRTERKKQSLVRRIGSAFVGGRMFARAAAR
Ga0307472_10124656323300032205Hardwood Forest SoilAMLAFTVLGLVLLLAGIDEFSNPRLRAEKKPRRGWLRMLFGGRLAVREEGA
Ga0335085_1030433833300032770SoilLGITVLGLVLVLAGIDEVSNPRLRTERVEKHSRLALLLGGRALARATGKAA
Ga0335079_1227945623300032783SoilALSFTVLGLVLVLAGIDEVSNPRLRSQRKPNGGLRRIALVLFGGRLLGKVEEVA
Ga0247829_1179001023300033550SoilLVLLLAGIDEFTNPRLRAQRKPRRGHLRTLFGGRLAEREEVKA


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