Metagenome / Metatranscriptome Family F063577

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063577
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	64 residues
Representative Sequence	METIRIVTDISKHVGCGGLMAMSQEAPQYIVEHEGLETRIPGAEMVCLRCGERIRSQDQVETPDE
Number of Associated Samples	71
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	59.84 %
% of genes near scaffold ends (potentially truncated)	30.23 %
% of genes from short scaffolds (< 2000 bps)	83.72 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.814 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere (10.078 % of family members)
Environment Ontology (ENVO)	Unclassified (37.984 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.860 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.23% β-sheet: 24.73% Coil/Unstructured: 72.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00072	Response_reg	4.65
PF04055	Radical_SAM	3.88
PF00665	rve	1.55
PF01695	IstB_IS21	1.55
PF00561	Abhydrolase_1	1.55
PF04295	GD_AH_C	0.78
PF13411	MerR_1	0.78
PF01370	Epimerase	0.78
PF08447	PAS_3	0.78
PF00483	NTP_transferase	0.78
PF13188	PAS_8	0.78
PF01834	XRCC1_N	0.78
PF01610	DDE_Tnp_ISL3	0.78
PF04679	DNA_ligase_A_C	0.78
PF02321	OEP	0.78
PF05728	UPF0227	0.78
PF08448	PAS_4	0.78
PF00005	ABC_tran	0.78
PF11154	DUF2934	0.78
PF08818	DUF1801	0.78
PF13207	AAA_17	0.78
PF16036	Chalcone_3	0.78
PF07635	PSCyt1	0.78
PF13561	adh_short_C2	0.78
PF14690	zf-ISL3	0.78
PF03743	TrbI	0.78
PF00989	PAS	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	1.55
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.55
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	1.55
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	1.55
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	1.55
COG4584	Transposase	Mobilome: prophages, transposons [X]	1.55
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.78
COG2721	Altronate dehydratase	Carbohydrate transport and metabolism [G]	0.78
COG2948	Type IV secretory pathway, VirB10 component	Intracellular trafficking, secretion, and vesicular transport [U]	0.78
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.78
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.78
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.81 %
All Organisms	root	All Organisms	44.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.81 %
cellular organisms	root	All Organisms → cellular organisms	44.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.81 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	17.05 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.10 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.55 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.81 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.55 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.78 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.81 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.20 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	4.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.81 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.20 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	4.65 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.78 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.78 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.81 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	4.65 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.78 %
Acidisarcina	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina	0.78 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.78 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.78 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.81 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4.65 %
Fimbriiglobus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Fimbriiglobus	0.78 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.78 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	0.78 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.78 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.81 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	4.65 %
Fimbriiglobus ruber	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Fimbriiglobus → Fimbriiglobus ruber	0.78 %
Nocardioides panacis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides panacis	0.78 %
Sphingomonas sp. RP10(2022)	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. RP10(2022)	0.78 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.78 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_118254511	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Fimbriiglobus → Fimbriiglobus ruber	542	Open in IMG/M
3300002568\|C688J35102_118312755	Not Available	548	Open in IMG/M
3300002568\|C688J35102_118570708	Not Available	573	Open in IMG/M
3300002568\|C688J35102_118676747	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300002568\|C688J35102_119985577	Not Available	836	Open in IMG/M
3300002568\|C688J35102_120381548	Not Available	1027	Open in IMG/M
3300002568\|C688J35102_120796285	Not Available	1606	Open in IMG/M
3300004643\|Ga0062591_101860022	Not Available	616	Open in IMG/M
3300004799\|Ga0058863_11926328	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300005179\|Ga0066684_11066192	Not Available	518	Open in IMG/M
3300005339\|Ga0070660_100326054	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	1262	Open in IMG/M
3300005435\|Ga0070714_100827316	Not Available	897	Open in IMG/M
3300005529\|Ga0070741_10000321	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	182557	Open in IMG/M
3300005535\|Ga0070684_100495894	Not Available	1131	Open in IMG/M
3300005563\|Ga0068855_100683180	Not Available	1100	Open in IMG/M
3300005576\|Ga0066708_10573365	Not Available	725	Open in IMG/M
3300005587\|Ga0066654_10525156	Not Available	650	Open in IMG/M
3300005614\|Ga0068856_100082432	Not Available	3192	Open in IMG/M
3300005614\|Ga0068856_100170707	All Organisms → cellular organisms → Bacteria	2187	Open in IMG/M
3300005618\|Ga0068864_102561358	Not Available	516	Open in IMG/M
3300005834\|Ga0068851_10753802	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300006056\|Ga0075163_10117805	All Organisms → cellular organisms → Bacteria	3177	Open in IMG/M
3300006058\|Ga0075432_10464305	Not Available	558	Open in IMG/M
3300006755\|Ga0079222_10495925	Not Available	892	Open in IMG/M
3300006755\|Ga0079222_11885722	Not Available	582	Open in IMG/M
3300006804\|Ga0079221_11375484	Not Available	560	Open in IMG/M
3300006806\|Ga0079220_11623260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300007004\|Ga0079218_10287419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1326	Open in IMG/M
3300010039\|Ga0126309_10945655	Not Available	574	Open in IMG/M
3300010152\|Ga0126318_10129938	Not Available	751	Open in IMG/M
3300010152\|Ga0126318_10461376	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300010152\|Ga0126318_11124578	Not Available	537	Open in IMG/M
3300010371\|Ga0134125_12885909	Not Available	522	Open in IMG/M
3300010373\|Ga0134128_12265891	Not Available	598	Open in IMG/M
3300010396\|Ga0134126_10160082	All Organisms → cellular organisms → Bacteria	2722	Open in IMG/M
3300010396\|Ga0134126_11166488	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	857	Open in IMG/M
3300012212\|Ga0150985_100062855	Not Available	632	Open in IMG/M
3300012212\|Ga0150985_102628806	Not Available	555	Open in IMG/M
3300012212\|Ga0150985_106686002	Not Available	521	Open in IMG/M
3300012212\|Ga0150985_109729383	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300012212\|Ga0150985_111973586	All Organisms → cellular organisms → Bacteria → Acidobacteria	957	Open in IMG/M
3300012212\|Ga0150985_112194786	Not Available	803	Open in IMG/M
3300012212\|Ga0150985_113217182	Not Available	775	Open in IMG/M
3300012212\|Ga0150985_113718354	All Organisms → cellular organisms → Bacteria	2005	Open in IMG/M
3300012212\|Ga0150985_116154117	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300012212\|Ga0150985_118157377	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300012212\|Ga0150985_118572672	All Organisms → cellular organisms → Bacteria	2046	Open in IMG/M
3300012212\|Ga0150985_119453629	Not Available	517	Open in IMG/M
3300012212\|Ga0150985_122411557	Not Available	756	Open in IMG/M
3300012469\|Ga0150984_103190518	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300012469\|Ga0150984_103235311	Not Available	547	Open in IMG/M
3300012469\|Ga0150984_104540086	Not Available	914	Open in IMG/M
3300012469\|Ga0150984_104870223	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300012469\|Ga0150984_109900433	Not Available	514	Open in IMG/M
3300012469\|Ga0150984_111120623	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300012469\|Ga0150984_111848628	Not Available	559	Open in IMG/M
3300012469\|Ga0150984_111852739	Not Available	939	Open in IMG/M
3300012469\|Ga0150984_113286355	Not Available	987	Open in IMG/M
3300012469\|Ga0150984_116002635	Not Available	663	Open in IMG/M
3300012469\|Ga0150984_117847245	Not Available	575	Open in IMG/M
3300012469\|Ga0150984_117899143	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300012469\|Ga0150984_119086205	All Organisms → cellular organisms → Bacteria → Proteobacteria	681	Open in IMG/M
3300013100\|Ga0157373_11251812	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	560	Open in IMG/M
3300013105\|Ga0157369_10145007	All Organisms → cellular organisms → Bacteria → Acidobacteria	2511	Open in IMG/M
3300013307\|Ga0157372_11710227	Not Available	724	Open in IMG/M
3300014487\|Ga0182000_10483493	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	571	Open in IMG/M
3300015371\|Ga0132258_10371034	All Organisms → cellular organisms → Bacteria	3546	Open in IMG/M
3300015371\|Ga0132258_13485914	Not Available	1078	Open in IMG/M
3300015372\|Ga0132256_103756821	Not Available	511	Open in IMG/M
3300018081\|Ga0184625_10167571	Not Available	1149	Open in IMG/M
3300018432\|Ga0190275_13050422	Not Available	542	Open in IMG/M
3300018465\|Ga0190269_10110420	All Organisms → cellular organisms → Bacteria	1363	Open in IMG/M
3300018468\|Ga0066662_10220405	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	1520	Open in IMG/M
3300018468\|Ga0066662_12089489	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	593	Open in IMG/M
3300018476\|Ga0190274_12948711	Not Available	571	Open in IMG/M
3300018476\|Ga0190274_13292763	Not Available	544	Open in IMG/M
3300018481\|Ga0190271_10828182	Not Available	1050	Open in IMG/M
3300020069\|Ga0197907_10671819	Not Available	562	Open in IMG/M
3300020080\|Ga0206350_10597576	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300021358\|Ga0213873_10042197	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300021358\|Ga0213873_10207358	Not Available	610	Open in IMG/M
3300021361\|Ga0213872_10000464	All Organisms → cellular organisms → Bacteria	33016	Open in IMG/M
3300021362\|Ga0213882_10014980	All Organisms → cellular organisms → Bacteria	2871	Open in IMG/M
3300021362\|Ga0213882_10044139	Not Available	1751	Open in IMG/M
3300021362\|Ga0213882_10152117	Not Available	949	Open in IMG/M
3300021362\|Ga0213882_10233298	Not Available	762	Open in IMG/M
3300021372\|Ga0213877_10126354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	795	Open in IMG/M
3300021374\|Ga0213881_10080207	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1400	Open in IMG/M
3300021374\|Ga0213881_10361734	Not Available	651	Open in IMG/M
3300021377\|Ga0213874_10251785	Not Available	651	Open in IMG/M
3300021384\|Ga0213876_10234765	Not Available	975	Open in IMG/M
3300021388\|Ga0213875_10352907	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300021388\|Ga0213875_10367978	Not Available	684	Open in IMG/M
3300021439\|Ga0213879_10161360	Not Available	654	Open in IMG/M
3300021441\|Ga0213871_10116197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. RP10(2022)	794	Open in IMG/M
3300021444\|Ga0213878_10349177	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	639	Open in IMG/M
3300021951\|Ga0222624_1449153	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	822	Open in IMG/M
3300021953\|Ga0213880_10165905	Not Available	609	Open in IMG/M
3300025929\|Ga0207664_10959979	Not Available	766	Open in IMG/M
3300025949\|Ga0207667_11118347	Not Available	770	Open in IMG/M
3300026078\|Ga0207702_10133882	All Organisms → cellular organisms → Bacteria	2234	Open in IMG/M
3300026078\|Ga0207702_10971288	Not Available	842	Open in IMG/M
3300027706\|Ga0209581_1007607	All Organisms → cellular organisms → Bacteria	7561	Open in IMG/M
3300027766\|Ga0209796_10028021	All Organisms → cellular organisms → Bacteria → Acidobacteria	1690	Open in IMG/M
3300030903\|Ga0308206_1028798	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	996	Open in IMG/M
3300030905\|Ga0308200_1028861	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	938	Open in IMG/M
3300030905\|Ga0308200_1119466	Not Available	580	Open in IMG/M
3300031091\|Ga0308201_10018457	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	1425	Open in IMG/M
3300031091\|Ga0308201_10026404	Not Available	1275	Open in IMG/M
3300031716\|Ga0310813_10129376	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	2005	Open in IMG/M
3300031726\|Ga0302321_103211228	Not Available	533	Open in IMG/M
3300031788\|Ga0302319_10559653	Not Available	1205	Open in IMG/M
3300031938\|Ga0308175_100001065	All Organisms → cellular organisms → Bacteria	18248	Open in IMG/M
3300031938\|Ga0308175_100013571	All Organisms → cellular organisms → Bacteria	6245	Open in IMG/M
3300031938\|Ga0308175_100040109	All Organisms → cellular organisms → Bacteria → Acidobacteria	3965	Open in IMG/M
3300031938\|Ga0308175_100197603	All Organisms → cellular organisms → Bacteria	1978	Open in IMG/M
3300031938\|Ga0308175_100309723	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300031938\|Ga0308175_100562222	Not Available	1222	Open in IMG/M
3300031938\|Ga0308175_100669183	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300031938\|Ga0308175_101892343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides panacis	668	Open in IMG/M
3300031996\|Ga0308176_11055550	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300031996\|Ga0308176_12441317	Not Available	557	Open in IMG/M
3300033181\|Ga0272431_10006781	All Organisms → cellular organisms → Bacteria	14058	Open in IMG/M
3300034149\|Ga0364929_0159487	Not Available	734	Open in IMG/M
3300034268\|Ga0372943_0051145	Not Available	2309	Open in IMG/M
3300034268\|Ga0372943_0149939	Not Available	1417	Open in IMG/M
3300034268\|Ga0372943_0199752	Not Available	1239	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.36%
Host-Associated	Host-Associated	41.86%
Engineered	Engineered	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.49%
Plants	Host-Associated → Plants	41.09%
Aquatic	Environmental → Aquatic	3.88%
Human	Host-Associated → Human	0.78%
Wastewater	Engineered → Wastewater	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.83%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	5.43%
Freshwater	Environmental → Aquatic → Freshwater	3.10%
Roots	Host-Associated → Plants → Roots	3.88%
Peat	Environmental → Terrestrial → Peat	1.55%
Sediment	Environmental → Aquatic → Sediment	0.78%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.78%
Floodplain	Environmental → Terrestrial → Floodplain	0.78%
Digestive System	Host-Associated → Human → Digestive System	0.78%
Phylloplane	Host-Associated → Plants → Phylloplane	0.78%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.21%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	11.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.63%
Loam	Environmental → Terrestrial → Soil → Loam	7.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.20%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	5.43%
Unclassified	Host-Associated → Plants → Roots → Unclassified	3.88%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.55%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.78%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.78%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.78%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	11.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.63%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.20%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	5.43%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	5.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.88%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.78%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.78%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.78%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	10.08%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	10.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.20%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	5.43%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	5.43%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.88%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	3.88%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.33%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.33%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.55%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.78%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.78%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.78%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.78%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.78%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006056	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 1A DNA	Engineered	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027766	Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz (SPAdes)	Host-Associated	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300033181	Rock endolithic microbial communities from Victoria Land, Antarctica - Linnaeus Terrace sud	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1182545111	3300002568	Soil	METIRIVTDISTHRECGGVMAMSQDAPEYILEHEGLETTIPGAEMICLRCGERIRSQDQVETAGE*
C688J35102_1183127551	3300002568	Soil	METIRITTDTSKHTGCGGLLAMSEDAPLYILEHEGLETRLPGVEMVCMKCGERIRSQDQVEVQESLKR*
C688J35102_1185707081	3300002568	Soil	RHAGCGGFMGMSQEAPQYIVEHEGLETRIAGSEMICLRCGERIRSQDQVETAEN*
C688J35102_1186767472	3300002568	Soil	METIRIVTDSSQHVGCGGLMAMSQEAPQYILEHEGLETKIAGAEMVCLQCGERIRSQDQVETPDE*
C688J35102_1199855771	3300002568	Soil	METIRIITETSKHAGCGGLLGMSGEAPLYIVEHEGLETRLPGVEMVCLTCGERIRSQDQVEADTQ*
C688J35102_1203815482	3300002568	Soil	MEAIRIITDISKHAGCGGFLAMSQEAPDYIIEHNGLETRIPGVEMVCLRCGERIRSQNQVEGEE*
C688J35102_1207962852	3300002568	Soil	METIRIITETSKHAGCGGLLGMSGDAPLYIVEHEGLETRLPGVEMVCLTCGERIRSQDQV
Ga0062591_1018600221	3300004643	Soil	METIRISTDRSKHAGCGGLLAMSEEAPVYIIEHEGLETELSGVEMVCGRCGERIRSQQQVQDVDQ*
Ga0058863_119263281	3300004799	Host-Associated	METIRIVTDVSKHMGCGGLMAMSQDAPQYIVEHEGLEARMPGVEMVCLRCGERIRSQDQVETAGE*
Ga0066684_110661922	3300005179	Soil	MEIIRIVTDLSKHVGCGGLMAMSQDAPEYIVEHEGLEAKMPGVEMVCLRCGERIRSQDQVETPGE*
Ga0070660_1003260541	3300005339	Corn Rhizosphere	METIRITTDKTTHAGCGGCLAMSGDAPVYIIEHEDVETRIVGVEMVCLVCGERIRSQDQVEDVEK*
Ga0070714_1008273161	3300005435	Agricultural Soil	METIRIITDVSKHAGCGGFLGMSQEAPQYILEHEGLETRIAGAEMVCLRCGERIRSQDQVEPAEQ*
Ga0070741_10000321126	3300005529	Surface Soil	METIRIVTDVSKHVGCGGLMAMSEDAPQYILEHEGLETTIPGAEMVCLRCGERIRSQDQVETPSE*
Ga0070684_1004958942	3300005535	Corn Rhizosphere	MERIRIVTDSSKHVGCGGLMAMSQDAPEYIVEHEGVETAIPGAEMVCIRCGERIRSQDQVETPGE*
Ga0068855_1006831802	3300005563	Corn Rhizosphere	METIRIVTDVSKHVGCGGLMAMSQEAPQYIVEHEGLETRIPGAEMVCLRCGERIRSQDQVETPDE*
Ga0066708_105733651	3300005576	Soil	MEIIRIVTDLSKHVGCGGLMAMSQDAPEYIVEHEGLEAKMPGVEMVCLRCGERIRSQD
Ga0068857_1008076111	3300005577	Corn Rhizosphere	MVLNMERIRIVTDSSKHVGCGGLMAMSQDAPEYTVEHEGVETTIP
Ga0066654_105251561	3300005587	Soil	MQTIRIVTDASKHVGCGGLMAMSQDAPEYILEHEGLETVIPGAEMVCLRCGERIRSQDQVETPGQ*
Ga0068856_1000824322	3300005614	Corn Rhizosphere	METIRIVTDSSKHAGCGGFLAMSEDAPVYVVEYQGLEASIPGVEMVCLRCGEKIRSQEQVETGE*
Ga0068856_1001707073	3300005614	Corn Rhizosphere	MKRIRIVTDSSKHVGCGGLMAMSQDAPEYIVEHEGVETAIPGAEMVCIRCGERIRSQDQVETPGE*
Ga0068864_1025613582	3300005618	Switchgrass Rhizosphere	DTSKHAKCGGLLGMSQEAPLYVVEHEGLETRIPGIEMVCLTCGERIRSQNQVEV*
Ga0068851_107538021	3300005834	Corn Rhizosphere	METIRIITESSKHKGCGGLMAMSQDAPEYILEHEGLETTIPGAEMICLRCGERIRSQDQVETPGE*
Ga0075163_101178053	3300006056	Wastewater Effluent	MESIRITTDTSKHAKCGGLLGMSHDAPLYIVEHNGLETKIPGVEMVCLTCGAKIRSQNEVEVVEA*
Ga0075432_104643051	3300006058	Populus Rhizosphere	METIRIVTDISKHVGCGGLMAMSQEAPQYIVEHEGLETRIPGAEMVCLRCGERIRSQDQVETPDE*
Ga0079222_104959252	3300006755	Agricultural Soil	MERIRIVTDSSKHVGCGGLMAMSQDAPEYILEHEGVETKIPGAEMVCIRCGERIRSQDQVETPGE*
Ga0079222_118857222	3300006755	Agricultural Soil	MGLNMERIRIVTDSSKHVGCGGLMAMSQDAPEYIVEHEGVETTIPGVEMVCVRCGERIRSQDQVETPAE*
Ga0079221_113754843	3300006804	Agricultural Soil	MGLNMERIRIVTDSSKHVGCGGLMAMSQDAPEYIVEHEGVETTIPGVEMVCVRCGE
Ga0079220_116232602	3300006806	Agricultural Soil	NMERIRIVTDISKHVGCGGLMAMSQEAPEYIVEHEGLETTIPGVEMVCLRCGERIRSQDQVETPGE*
Ga0079218_102874192	3300007004	Agricultural Soil	METIRITTDTSKHAGCGGLLAMSEDAPLYILEHEGLETRLPGVEMVCMTCGERIRLQDQVEVQDS*
Ga0126309_109456551	3300010039	Serpentine Soil	METIRITTDTSRHAGCGGLLGMSEEAPLYIVEHEGLETRLPGVEMVCMTCGDRIRSQDEVEIVEE*
Ga0126318_101299382	3300010152	Soil	DLSQHVGCGGLMAMSQEAPQYILEHEGLETTVAGAEMICLRCGERIRSQDQVETPDE*
Ga0126318_104613762	3300010152	Soil	VTDVSKHRGCGGLMAMSQDAPEYVLEHEGLETTIPGAEMICLRCGERIRSQEQVETPGQ*
Ga0126318_111245781	3300010152	Soil	MERIRIVTDISKHVGCGGLMAMSQEAPEYIVEHEGVETIIPGAEMVCIRCGERIRSQDQVETPSE*
Ga0134125_128859092	3300010371	Terrestrial Soil	MQRIQIVTDLSKHVGCGGRMAMSQEAPEYILEHEGLETTIPGVEMVCLRCGERIRSQDQVETPDE*
Ga0134128_122658912	3300010373	Terrestrial Soil	MQRIQIVTDLSKHVGCGGLMAMSQEAPEYILEHEGLETTIPGVEMVCLRCGERIRSQDQVETPDE*
Ga0134126_101600823	3300010396	Terrestrial Soil	METIRIVTDSSKHVGCGGFMAMSQEAPQYIVEHQGLESTIAGVEMVCLRCGERVRSQDQVETPGE*
Ga0134126_111664881	3300010396	Terrestrial Soil	MERIRIVTDISKHVGCGGLMAMSQEAPEYIVEHEGVETIIPGAEMVCVRCGERIRSQDQVETPSE*
Ga0150985_1000628552	3300012212	Avena Fatua Rhizosphere	MEIIRITTDSTQHVGCGGFLGMSQEAPEYIIEYKGLETRIPGVEMVCLRCGERIRSQDQVEGGEQ*
Ga0150985_1026288062	3300012212	Avena Fatua Rhizosphere	MATIRITTDGTKHKDCGGFLAMSEDAPIYIIEHEGLETRLTGIEMICLTCGARIRSQDQVEDVEN*
Ga0150985_1066860021	3300012212	Avena Fatua Rhizosphere	MRLRIDYCSVRIIRLGMETIRIVTDASKHAGCGGFMAMSQEAPQYVVEHEGLETRIAGAEMVCLRCGERIR
Ga0150985_1097293831	3300012212	Avena Fatua Rhizosphere	IAYIGTMETIRITTDTSRHAGCGGLLGMSEDAPLYIVEHEGLETRLPGIELVCLTCGARIRSQDEVEVINE*
Ga0150985_1119735861	3300012212	Avena Fatua Rhizosphere	METIRITADTSTHTGCGGFLAMSEEAPLYILEHEGLETSLPGVEMVCMRCGERIRSQDQVEIAENG*
Ga0150985_1121947861	3300012212	Avena Fatua Rhizosphere	ITTDTSRHAGCGGLLGMSEEAPLYIVEHEGLETRLPGVEMVCLTCGDRIRSQDEVEVVQE
Ga0150985_1132171821	3300012212	Avena Fatua Rhizosphere	IRITTDTSKHAGCGGLLGMSGEAPLYIVEHEGLETRLPGVEMVCLTCGARIRSQEEVKVVEE*
Ga0150985_1137183542	3300012212	Avena Fatua Rhizosphere	MKTIRITTDTSKHAGCGGLLGMSDDAPLYIVEHEGLETRLPGIEMVCLSCGQRIRSQDQGEVVH*
Ga0150985_1161541172	3300012212	Avena Fatua Rhizosphere	METIRITTDTSKHAGCGGLLGMSEDAPLYIVEHEGLETRLPGIEMVCLTCGARIRSQAEVDIVEE*
Ga0150985_1181573771	3300012212	Avena Fatua Rhizosphere	PMETIRITTDTSTHAGCGGLLAMSEDAPVYIIEHEGLETALSGVEMVCVRCGERIRSQNQVEVASK*
Ga0150985_1185726721	3300012212	Avena Fatua Rhizosphere	RIVTDISKHAGCGGFMAMSQEAPQYVVEHEGLETRIAGAEMVCLRFGERIRSQDQVETPDE*
Ga0150985_1194536291	3300012212	Avena Fatua Rhizosphere	TDTSRHAGCGGLLGMSEEAPLYIVEHEGLETRLPGVEMVCLTCGDRIRSQDEVEIVPE*
Ga0150985_1224115572	3300012212	Avena Fatua Rhizosphere	SSNGNMGLSMERIRIVTDSSKHVGCGGAMAMSQDAPEYIVEHEGVETLIPGAEMVCVRCGERIRSQDQVETQGE*
Ga0150984_1031905181	3300012469	Avena Fatua Rhizosphere	METIRITTDTSTHAGCGGLLAMSEDAPVYIIEHEGLETALSGVEMVCVRCGERIRSQNQVEVASK*
Ga0150984_1032353111	3300012469	Avena Fatua Rhizosphere	RIVTDISQHVGCGGLMAMSQEAPQYILEHEGLETTIAGAEMVCLQCGERIRSQDQVQTTHE*
Ga0150984_1045400862	3300012469	Avena Fatua Rhizosphere	RIVTDSSKHVGCGGAMAMSQDAPEYIVEHEGVETLIPGAEMVCVRCGERIRSQDQVETQGE*
Ga0150984_1048702232	3300012469	Avena Fatua Rhizosphere	MKTIRITTDTSKHAGCGGLLGMSDDAPLYIVEHEGLETRLPGIEMVCLSCGQRIRSQDQVEVVH*
Ga0150984_1099004331	3300012469	Avena Fatua Rhizosphere	METIRIVTESSKHKGCGGLMAMSQDAPEYILEHEGLETTIPGAEMICLRCGERIRSQDQVETPGE*
Ga0150984_1111206232	3300012469	Avena Fatua Rhizosphere	RIVTDISKHAGCGGFMAMSQEAPQYVVEHEGLETRIAGAEMVCLRCGERIRSQDQVETPDE*
Ga0150984_1118486281	3300012469	Avena Fatua Rhizosphere	TMETIRITTDTSRHAGCGGLLGMSEEAPLYIVEHEGLETRLPGVEMVCLTCGDRIRSQDEVEIVPE*
Ga0150984_1118527392	3300012469	Avena Fatua Rhizosphere	RVNYHSELNMETIRIVTDVSRHAGCGGFMGMSQEAPQYIVEHEGLETRIAGAEMICLRCGERIRSQDQVEPAEN*
Ga0150984_1132863551	3300012469	Avena Fatua Rhizosphere	METIRIITETSKHAGCGGLLGMSGDAPLYIVEHEGLETRLPGVEMVCLTCGERIRSQYQVEADTE*
Ga0150984_1160026351	3300012469	Avena Fatua Rhizosphere	TIRITTDTSRHAGCGGLLGMSEEAPLYIVEHEGLETRLPGVEMVCLTCGDRIRSQDEVEVVQE*
Ga0150984_1178472452	3300012469	Avena Fatua Rhizosphere	METIRIVTDVSRHAGCGGFMGMSQEAPQYIVEHEGLETRIAGAEMICLRCGERIRSQEQVEPAEN*
Ga0150984_1178991431	3300012469	Avena Fatua Rhizosphere	SKHVGCGGLMAMLQEAPEYILGHEGLETVIPGAEMVCLRCGERIRSQDQVETPGQ*
Ga0150984_1190862051	3300012469	Avena Fatua Rhizosphere	IRIIADISKHAGCGGFLAMSQEAPDYIIEYNGLETRIPGVEMICLRCGERIRSQNQVEGGE*
Ga0157373_112518121	3300013100	Corn Rhizosphere	MERIRIVTDISKHVGCGGLMAMSQDAPEYIVEHEGVETAIPGAEMVCIRCGERI
Ga0157369_101450071	3300013105	Corn Rhizosphere	MELNMERIRIVTDVSKHVGCGGLMAMSQEAPEYIVEHEGLETTIPGAEMVCLRCGERIRSQEQVETTGE*
Ga0157372_117102271	3300013307	Corn Rhizosphere	MGLNMERIRIVTDSSKHVGCGGVMAMSQDAPEYIVEHEGVETAIPGAEMVCVRCGERIRSQDQVETPGE*
Ga0182000_104834931	3300014487	Soil	MGLNMERIRIVTDSSKHVGCGGLMAMSQDAPEYIVEHEGVEVTIPGAEMVCLSCGERIRSQDQVETPGE*
Ga0132258_103710344	3300015371	Arabidopsis Rhizosphere	METIRIVTDVSKHVGCGGLMAMSQDAPQYILEHEGLQTTIPGMEMVCLRCGERIRSQDQVETPGE*
Ga0132258_134859142	3300015371	Arabidopsis Rhizosphere	METIRITTDTSKHAGCGGILAMSQEAPQYIIEHEGLETLIPGIEMVCLKCRERIRSQAQVEVIEE*
Ga0132256_1037568212	3300015372	Arabidopsis Rhizosphere	RITTDASKHAGCGGLLAMSGDAPLYILEHEGLETRLPGVEMVCMTCGEKIRSQDQVEVEGS*
Ga0184625_101675712	3300018081	Groundwater Sediment	ITTDTSKHAKCGGLLGMSQEAPLYVVEHEGLETRIPGIEMVCLTCGERIRSQNQVEV
Ga0190275_130504221	3300018432	Soil	METMETIRITTDTSRHAGCGGLLGMSEEAPLYIVEHEGLETRLPGVESVCLTCGDRIRSQDEVEVTGK
Ga0190269_101104202	3300018465	Soil	METIRITTDTSKHAGCGGFLGMSQDAPVYIIEHEGLETRLPGIEMICLTCGARIRSQEE
Ga0066662_102204052	3300018468	Grasslands Soil	MQTIRIVTDASKHVGCGGLMAMSQEAPEYILEHEGLETVIPGAEMVCLRCGERIRSQDQVETPGQ
Ga0066662_120894891	3300018468	Grasslands Soil	MATIRIVTDTSKHAGCGGFLGMSQEAPEYIVEHEGFESRIPGVEMVCLRCGERIRSQEQVEPREA
Ga0190274_129487111	3300018476	Soil	METIRITTDTTRHAGCGGLLGMSEEAPLYIVEHEGLETRLPGVEMVCLTCGDRIRSQNE
Ga0190274_132927631	3300018476	Soil	VNTTVETIRITTDTSKHAKCGGLLGMSQEAPLYIVEHEGLETRIPGIEMVCLTCGDRIRSQDQVEV
Ga0190271_108281823	3300018481	Soil	MQSTIRIDTQSSKHAGCGGLLAMSQDAPSYIVEHEGLETIIPGVEMVCLKCGEMIRLQEQVEAK
Ga0197907_106718192	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	METIRIVTDISKHVGCGGLMAMSQDAPQYIVEHEGLEARMPGVEMVCLRCGERIRSQDQVETAGE
Ga0206350_105975762	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	METIRIVTDVSKHTGCGGLMAMSQDAPQYIVEHEGLEARMPGVEMVCLRCGERIRSQDQVETAGE
Ga0213873_100421973	3300021358	Rhizosphere	METIRIITDMSKHVGCGGLMAMSQDAPQYILEHEGLETTVGGAEMVCLRCGERIRSQDQVETPSE
Ga0213873_102073582	3300021358	Rhizosphere	MNTIRITTDTSKHAGCGGLLAMSSEAPLYIVEHGDLETRIPGVEMVCLKCGERIRSQEQVEE
Ga0213872_100004647	3300021361	Rhizosphere	METIRIVTDISKHVGCGGLMAMSQEAPQYILEHEGLETIVAGAEMVCLRCGERIRSQDQVETPSE
Ga0213882_100149804	3300021362	Exposed Rock	METIRIVTDISKHVGCGGLMGMSQDAPQYILEHEGLETTVAGAEMICLRCGERIRSQDQVETPTE
Ga0213882_100441391	3300021362	Exposed Rock	MEIIRITTDVSKHAGCGGFLGMSQEAPDYIIEHNGLETRIPGVEMVCLRCGERIRSQEQVEGEEQ
Ga0213882_101521171	3300021362	Exposed Rock	MERIRIVTDISKHVGCGGIMAMSQEAPEYIVEHEGLETTIPGAEMICLRCGERIRSQDQVETPGQ
Ga0213882_102332981	3300021362	Exposed Rock	METIRIVTDVSQHVGCGGLMAMSQDAPQYILEHEGLETIVAGAEMVCLRCGEKIRSQDQVETPGE
Ga0213877_101263542	3300021372	Bulk Soil	METIRIITDISKHVGCGGLMAMSQDAPQYILEHEGLETTVGGAEMVCLRCGERIRSQDQVETPSE
Ga0213881_100802072	3300021374	Exposed Rock	MAIIRITTDTSQHAGCGGLLAMSQEAPEYIIEHNGLETRIPGVEMVCLRCGEKIRSQEQVEGGEQ
Ga0213881_103617341	3300021374	Exposed Rock	MAIIRITTDTSQHAGCGGLLAMSQEAPEYIIEHNGLETRIPGVEMVCLRCGERIRSQDQVEGGKE
Ga0213874_102517851	3300021377	Plant Roots	METIRIVTDISKHVGCGGLMAMSQDAPQYILEHEGLETRVAGAEMVCLRCGERIRSQDQVETTTE
Ga0213876_102347652	3300021384	Plant Roots	METIRIITEISKHAGCGGLLGMSGDAPLYIVEHEGLETRLPGVEMVCLTCGERIRSQDQVEADTE
Ga0213875_102836962	3300021388	Plant Roots	METIRIVTNISKHVGCGGLMGMSQDAPQYILEHEGLETTVAGAEMVCL
Ga0213875_103529071	3300021388	Plant Roots	METIRIITDISKHVGCGGLMAMSQDAPQYILEHEGLETTVAGAEMVCLRCGER
Ga0213875_103679781	3300021388	Plant Roots	METIRIVTDTSKHLGCGGLMAMSQDAPQYILEHEGMETTVAGVEMVCLRCGERIRSQEQVETPSE
Ga0213879_101613601	3300021439	Bulk Soil	GCGGLMAMSQDAPQYILEHEGLETTVAGAEMVCLRCGERIRSQDQVDTPSEELLQATDDVVPGTTMRGESKV
Ga0213871_101161971	3300021441	Rhizosphere	METIRIVTDISKHVGCGGLMAMSQEAPQYILEHEGLETTIAGVEMICLRCGERIRSQEQVETPDE
Ga0213878_103491771	3300021444	Bulk Soil	METIRIVTDISKHVGCGGLMAMSQDAPQYILEHEGLETTVAGAEMVCLRCGERIRSQDQVDTPSEELLQATDD
Ga0222624_14491531	3300021951	Groundwater Sediment	METIRITTDATKHKGCGGFLGMSEDAPTYIIEHEGHETRLTGIEMICLTCGERIRSQGQVEDVEN
Ga0213880_101659052	3300021953	Exposed Rock	METIRIVTDRSQHVGCGGLMAMSQEAPQYILEHEGLVTQIAGAEMVCLRCGERIRSQDQVETPDK
Ga0207664_109599791	3300025929	Agricultural Soil	METIRIITDVSKHAGCGGFLGMSQEAPQYILEHEGLETRIAGAEMVCLRCGERIRSQDQVEPAEQ
Ga0207667_111183471	3300025949	Corn Rhizosphere	METIRIVTDVSKHVGCGGLMAMSQEAPQYIVEHEGLETRIPGAEMVCLRCGERIRSQDQVETPDE
Ga0207702_101338822	3300026078	Corn Rhizosphere	MKRIRIVTDSSKHVGCGGLMAMSQDAPEYIVEHEGVETAIPGAEMVCIRCGERIRSQDQVETPGE
Ga0207702_109712882	3300026078	Corn Rhizosphere	METIRIVTDSSKHAGCGGFLAMSEDAPVYVVEYQGLEASIPGVEMVCLRCGEKIRSQEQVETGE
Ga0209581_10076074	3300027706	Surface Soil	METIRIVTDVSKHVGCGGLMAMSEDAPQYILEHEGLETTIPGAEMVCLRCGERIRSQDQVETPSE
Ga0209796_100280212	3300027766	Agave	MELNMERIRIVTDVSKHVGCGGLMAMSQEAPEYIVEHEGLETTIPGAEMVCLRCGERIRSQEQVETTGE
Ga0308206_10287981	3300030903	Soil	METIRITTDATKHKGCGGFLGMSEDAPLYIIEHGGLETRLTGIEMICLTCGERIRSQDQVEDLEN
Ga0308200_10288611	3300030905	Soil	METIRITTDATKHKGCGGFLGMSEDAPLYIIEHGGLETRLTGIEMICLTCGERIRSQDQVKMVEK
Ga0308200_11194661	3300030905	Soil	TTDSSKHSGCGGLLGMSQDAPLYIVEHEGLETRIPGIEMVCLKCGERIRSQDSVGE
Ga0308201_100184571	3300031091	Soil	HAGCGGLLGMSQDAPDYILEHQGLETKIPGIEMVCLRCEERIRSQSQVEPGEG
Ga0308201_100264042	3300031091	Soil	IRIVTDVSKHAACGGFVGMSQEAPQYILEHEGLETRIAGAEMVCLRCGEKIRSQEQIEPREG
Ga0310813_101293764	3300031716	Soil	METIRITTDKTTHAGCGGFLAMSGDAPVYIIEHEDVETRIVGVEMVCLVCGERIRSQNQVEDVEK
Ga0302321_1032112281	3300031726	Fen	METITIKTNTSKHANCGALLGISETAPLYIVEHEGLETRIPGIEMICLGCGEYIHKQDQVEA
Ga0302319_105596532	3300031788	Bog	METIKITTDSSKHAGCGGLLGMSQDAPLYIVEHEGLETRIPGIEMVCLKCGERIRSQDSVGE
Ga0308175_10000106515	3300031938	Soil	METIRIVTHISKHAGCGGFMAMSQEAPQYIVEHEGLVTRIAGAEMVCLRCGERIRSQDQVETPEE
Ga0308175_1000135715	3300031938	Soil	METIRIITDVSKHAGCGGFLGMSQDAPQYVLEHEGLETRIAGAEMVCLRCGERIRSQDQVEPAEQ
Ga0308175_1000401094	3300031938	Soil	METIRITTDTSKHAGCGGYLGMSQDAPLYIVEHEELETRIPGIEMVCLKCGERIRSQEQVESSDK
Ga0308175_1001976032	3300031938	Soil	METIRIITDVSKHAGCGGFLGMSQEAPQYVLEHEGLETRIAGAEMVCLRCGERIRSQEQVEPAEQ
Ga0308175_1003097231	3300031938	Soil	METIRIVTDVSKHVGCGGLMAMSQEAPQYILEHEGLETTIAGAEMVCLRCGERIRSQDQVETPGK
Ga0308175_1005622223	3300031938	Soil	TKHAGCGGILAMSQEAPQYIIEHEGLETIIPGIEMVCLRCGERIRSQAQVEVVGE
Ga0308175_1006691832	3300031938	Soil	METIRIITDVSKHLGCGGLMAMSQDAPQYILEHEGLETTIAGAEMVCLRCGERIRSQDQVETPGK
Ga0308175_1018923432	3300031938	Soil	METIRIVTDVSKHAGCGGFVGMSQEAPQYILEHEGLETRIAGAEMVCLRCGEKIRSQEQIEPREG
Ga0308176_110555502	3300031996	Soil	MDTIRIVTDISKHAGCGGLMAMSQDAPQYILEHEGLETTIPGAEMVCLRCGERIRSQDEVETPVE
Ga0308176_124413171	3300031996	Soil	METIRITTDTTKHAGCGGILAMSQEAPQYIIEHEGLETIIPGIEMVCLRCGERIRSQAQVEVVGE
Ga0272431_100067819	3300033181	Rock	METTIRITTDTSKHAGCGGVLGMSQEAPVYLVEHEGLETRMPGIEMVCLRCGERIRSQDQVEVVEN
Ga0364929_0159487_567_734	3300034149	Sediment	TDTSKHAKCGGLLGMSQEAPLYVVEHEGLETRIPGIEMVCLTCGERIRSQNQVEV
Ga0372943_0051145_1906_2136	3300034268	Soil	MPYTVARISSPMETIRIVTDISRHAGYGGLLGMSQEAPDDILEHEGLETKIPGNEMVCLRCGERIRSQNQVEPRES
Ga0372943_0149939_312_509	3300034268	Soil	METIRIVTDVSRHAGCGGFMGISQEAPQYIVEHEGLETRIAGAEMICLRCGERIRSQDQVEPAEN
Ga0372943_0199752_898_1119	3300034268	Soil	VDYHGELQMETIRIITDVSTHAGCGGFMGMSEEAPQYILEHEGLETRIPGAEMVCLRCGERIRSQDQVETAEK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063577

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences