Metagenome / Metatranscriptome Family F063576

Basic Information
Family ID	F063576
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	88 residues
Representative Sequence	MSTLERLLQDELNRLVDRIAARAGEDTAAGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDGAEAPARISRKAA
Number of Associated Samples	117
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.81 %
% of genes near scaffold ends (potentially truncated)	31.01 %
% of genes from short scaffolds (< 2000 bps)	68.99 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Most Common Taxonomy
Group	Bacteria (86.047 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.954 % of family members)
Environment Ontology (ENVO)	Unclassified (27.132 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (31.008 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.33% β-sheet: 0.00% Coil/Unstructured: 46.67%
Feature Viewer

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Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF09828	Chrome_Resist	13.95
PF13460	NAD_binding_10	8.53
PF07690	MFS_1	6.20
PF04134	DCC1-like	3.88
PF02417	Chromate_transp	3.88
PF00144	Beta-lactamase	3.88
PF07075	DUF1343	3.10
PF01451	LMWPc	2.33
PF01522	Polysacc_deac_1	0.78
PF12697	Abhydrolase_6	0.78
PF13193	AMP-binding_C	0.78
PF02423	OCD_Mu_crystall	0.78
PF00155	Aminotran_1_2	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	3.88
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	3.88
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	3.88
COG2367	Beta-lactamase class A	Defense mechanisms [V]	3.88
COG3011	Predicted thiol-disulfide oxidoreductase YuxK, DCC family	General function prediction only [R]	3.88
COG3876	Exo-beta-N-acetylmuramidase YbbC/NamZ, DUF1343 family	Cell wall/membrane/envelope biogenesis [M]	3.10
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.78

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.05 %
Unclassified	root	N/A	13.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.05 %
Unclassified	root	N/A	13.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.05 %
Unclassified	root	N/A	13.95 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	13.95 %
Unclassified	root	N/A	13.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.63 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	9.30 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	13.95 %
Unclassified	root	N/A	13.95 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	9.30 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	13.95 %
Unclassified	root	N/A	13.95 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	9.30 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.95 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	9.30 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	6.98 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.95 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	9.30 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	6.20 %
Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_68_19	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_68_19	0.78 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.95 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	9.30 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	6.20 %
Sphingomonas echinoides	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas echinoides	0.78 %
Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_68_19	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_68_19	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_9196812	All Organisms → cellular organisms → Bacteria → Proteobacteria	3334	Open in IMG/M
3300000574\|JGI1357J11328_10164896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	617	Open in IMG/M
3300000953\|JGI11615J12901_10030921	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300002122\|C687J26623_10014588	All Organisms → cellular organisms → Bacteria	2016	Open in IMG/M
3300002245\|JGIcombinedJ26739_100542004	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300003319\|soilL2_10209720	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1214	Open in IMG/M
3300003324\|soilH2_10006815	All Organisms → cellular organisms → Bacteria	11838	Open in IMG/M
3300003994\|Ga0055435_10005540	All Organisms → cellular organisms → Bacteria	2149	Open in IMG/M
3300004062\|Ga0055500_10178763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	514	Open in IMG/M
3300004114\|Ga0062593_100077224	All Organisms → cellular organisms → Bacteria	2236	Open in IMG/M
3300004114\|Ga0062593_101430757	Not Available	740	Open in IMG/M
3300005204\|Ga0068997_10007380	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300005293\|Ga0065715_11000414	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	545	Open in IMG/M
3300005335\|Ga0070666_10361694	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1040	Open in IMG/M
3300005434\|Ga0070709_11615813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas echinoides	528	Open in IMG/M
3300005438\|Ga0070701_10286645	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300005439\|Ga0070711_100541055	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300005440\|Ga0070705_100430495	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300005529\|Ga0070741_10000973	All Organisms → cellular organisms → Bacteria	93969	Open in IMG/M
3300005843\|Ga0068860_100741739	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300005921\|Ga0070766_10552873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	769	Open in IMG/M
3300006049\|Ga0075417_10417992	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300006049\|Ga0075417_10458189	Not Available	637	Open in IMG/M
3300006755\|Ga0079222_10505860	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	887	Open in IMG/M
3300006806\|Ga0079220_10420243	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	881	Open in IMG/M
3300006806\|Ga0079220_11626032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	561	Open in IMG/M
3300006845\|Ga0075421_101070186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	908	Open in IMG/M
3300006847\|Ga0075431_100953608	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300006852\|Ga0075433_10148507	All Organisms → cellular organisms → Bacteria	2085	Open in IMG/M
3300006852\|Ga0075433_10778047	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300006854\|Ga0075425_100151245	All Organisms → cellular organisms → Bacteria	2659	Open in IMG/M
3300006871\|Ga0075434_100033989	All Organisms → cellular organisms → Bacteria → Proteobacteria	5033	Open in IMG/M
3300009038\|Ga0099829_10006378	All Organisms → cellular organisms → Bacteria	7279	Open in IMG/M
3300009053\|Ga0105095_10440321	Not Available	721	Open in IMG/M
3300009089\|Ga0099828_10000902	All Organisms → cellular organisms → Bacteria	19030	Open in IMG/M
3300009098\|Ga0105245_12984483	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	524	Open in IMG/M
3300009147\|Ga0114129_10024834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	8495	Open in IMG/M
3300010391\|Ga0136847_10085784	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300010403\|Ga0134123_10012878	All Organisms → cellular organisms → Bacteria	5752	Open in IMG/M
3300011428\|Ga0137456_1033997	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300012174\|Ga0137338_1010538	Not Available	1708	Open in IMG/M
3300012685\|Ga0137397_10005723	All Organisms → cellular organisms → Bacteria → Proteobacteria	8609	Open in IMG/M
3300012922\|Ga0137394_10025556	All Organisms → cellular organisms → Bacteria	4764	Open in IMG/M
3300012930\|Ga0137407_10104427	All Organisms → cellular organisms → Bacteria	2435	Open in IMG/M
3300012955\|Ga0164298_10018605	All Organisms → cellular organisms → Bacteria	2911	Open in IMG/M
3300012988\|Ga0164306_11684737	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	549	Open in IMG/M
3300013308\|Ga0157375_10349940	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1643	Open in IMG/M
3300014308\|Ga0075354_1017856	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300014745\|Ga0157377_10955611	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	645	Open in IMG/M
3300014873\|Ga0180066_1000211	All Organisms → cellular organisms → Bacteria → Proteobacteria	5078	Open in IMG/M
3300014877\|Ga0180074_1010431	All Organisms → cellular organisms → Bacteria → Proteobacteria	1696	Open in IMG/M
3300014884\|Ga0180104_1009357	All Organisms → cellular organisms → Bacteria	2243	Open in IMG/M
3300015170\|Ga0120098_1027124	Not Available	737	Open in IMG/M
3300015241\|Ga0137418_10104461	All Organisms → cellular organisms → Bacteria	2545	Open in IMG/M
3300017959\|Ga0187779_10390770	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	905	Open in IMG/M
3300017961\|Ga0187778_10004100	All Organisms → cellular organisms → Bacteria	9662	Open in IMG/M
3300017973\|Ga0187780_10621456	Not Available	776	Open in IMG/M
3300017993\|Ga0187823_10182428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	679	Open in IMG/M
3300017997\|Ga0184610_1032424	All Organisms → cellular organisms → Bacteria	1473	Open in IMG/M
3300018028\|Ga0184608_10229084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	816	Open in IMG/M
3300018052\|Ga0184638_1186743	Not Available	734	Open in IMG/M
3300018054\|Ga0184621_10020275	All Organisms → cellular organisms → Bacteria	2037	Open in IMG/M
3300018058\|Ga0187766_10942923	Not Available	611	Open in IMG/M
3300018060\|Ga0187765_11062126	Not Available	559	Open in IMG/M
3300018063\|Ga0184637_10096663	All Organisms → cellular organisms → Bacteria → Proteobacteria	1817	Open in IMG/M
3300018074\|Ga0184640_10034326	Not Available	2031	Open in IMG/M
3300018084\|Ga0184629_10362651	Not Available	763	Open in IMG/M
3300018422\|Ga0190265_10023886	All Organisms → cellular organisms → Bacteria → Proteobacteria	4938	Open in IMG/M
3300018422\|Ga0190265_10035535	All Organisms → cellular organisms → Bacteria → Proteobacteria	4192	Open in IMG/M
3300018422\|Ga0190265_10044262	All Organisms → cellular organisms → Bacteria → Proteobacteria	3826	Open in IMG/M
3300018429\|Ga0190272_10155731	All Organisms → cellular organisms → Bacteria	1581	Open in IMG/M
3300019259\|Ga0184646_1055702	Not Available	604	Open in IMG/M
3300019360\|Ga0187894_10198487	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300019377\|Ga0190264_10458679	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300019487\|Ga0187893_10168605	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300019487\|Ga0187893_10236993	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300019487\|Ga0187893_10254338	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300019865\|Ga0193748_1022513	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_02_FULL_68_19	593	Open in IMG/M
3300019889\|Ga0193743_1030172	All Organisms → cellular organisms → Bacteria	2612	Open in IMG/M
3300019890\|Ga0193728_1164500	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300020001\|Ga0193731_1084129	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300020003\|Ga0193739_1005096	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3544	Open in IMG/M
3300020021\|Ga0193726_1024243	All Organisms → cellular organisms → Bacteria → Proteobacteria	3054	Open in IMG/M
3300020579\|Ga0210407_10118063	All Organisms → cellular organisms → Bacteria	2027	Open in IMG/M
3300020580\|Ga0210403_10185426	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300020581\|Ga0210399_10301737	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300021073\|Ga0210378_10013048	All Organisms → cellular organisms → Bacteria → Proteobacteria	3452	Open in IMG/M
3300021420\|Ga0210394_10827500	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300021432\|Ga0210384_10660820	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300021476\|Ga0187846_10091656	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300021478\|Ga0210402_10040638	All Organisms → cellular organisms → Bacteria	4043	Open in IMG/M
3300022694\|Ga0222623_10230200	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300025165\|Ga0209108_10377258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	699	Open in IMG/M
3300025321\|Ga0207656_10472521	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	635	Open in IMG/M
3300025324\|Ga0209640_10014474	All Organisms → cellular organisms → Bacteria	6873	Open in IMG/M
3300025324\|Ga0209640_10044147	All Organisms → cellular organisms → Bacteria	3878	Open in IMG/M
3300025535\|Ga0207423_1003962	Not Available	2143	Open in IMG/M
3300025903\|Ga0207680_10829978	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	663	Open in IMG/M
3300025910\|Ga0207684_10439399	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1121	Open in IMG/M
3300025923\|Ga0207681_10492730	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300025933\|Ga0207706_10697875	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300025936\|Ga0207670_10133969	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1819	Open in IMG/M
3300026333\|Ga0209158_1240191	All Organisms → cellular organisms → Bacteria → Proteobacteria	622	Open in IMG/M
3300026535\|Ga0256867_10024696	All Organisms → cellular organisms → Bacteria → Proteobacteria	2548	Open in IMG/M
3300027603\|Ga0209331_1101574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	702	Open in IMG/M
3300027651\|Ga0209217_1030638	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300027815\|Ga0209726_10063094	All Organisms → cellular organisms → Bacteria	2461	Open in IMG/M
3300027873\|Ga0209814_10225957	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300027873\|Ga0209814_10338719	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300027909\|Ga0209382_10942514	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300028771\|Ga0307320_10469727	Not Available	508	Open in IMG/M
3300028828\|Ga0307312_10435806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	863	Open in IMG/M
3300028906\|Ga0308309_11543653	Not Available	566	Open in IMG/M
3300029636\|Ga0222749_10468777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	677	Open in IMG/M
3300030006\|Ga0299907_10295060	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1323	Open in IMG/M
3300030336\|Ga0247826_11215016	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	605	Open in IMG/M
3300030620\|Ga0302046_10431115	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10136041	Not Available	671	Open in IMG/M
3300031740\|Ga0307468_100305914	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300031962\|Ga0307479_10097601	All Organisms → cellular organisms → Bacteria	2853	Open in IMG/M
3300032174\|Ga0307470_10046135	All Organisms → cellular organisms → Bacteria	2197	Open in IMG/M
3300032180\|Ga0307471_100505125	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300032180\|Ga0307471_101279603	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300032180\|Ga0307471_101463396	Not Available	842	Open in IMG/M
3300032205\|Ga0307472_101280667	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300033432\|Ga0326729_1068746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	540	Open in IMG/M
3300034164\|Ga0364940_0058995	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300034176\|Ga0364931_0197731	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.17%
Host-Associated	Host-Associated	17.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.57%
Aquatic	Environmental → Aquatic	18.60%
Plants	Host-Associated → Plants	17.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.50%
Sediment	Environmental → Aquatic → Sediment	10.08%
Freshwater	Environmental → Aquatic → Freshwater	5.43%
Marine	Environmental → Aquatic → Marine	3.10%
Cave	Environmental → Terrestrial → Cave	3.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.33%
Floodplain	Environmental → Terrestrial → Floodplain	1.55%
Peat	Environmental → Terrestrial → Peat	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.40%
Loam	Environmental → Terrestrial → Soil → Loam	10.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.08%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.65%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.10%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.10%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	3.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.33%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.55%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.55%
Lake	Environmental → Aquatic → Freshwater → Lake	0.78%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.78%
Sand	Environmental → Terrestrial → Soil → Sand	0.78%
Fossil	Environmental → Terrestrial → Soil → Fossil	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.08%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.43%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.65%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.88%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.33%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.33%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	1.55%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.55%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.78%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Soil → Fossil → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.30%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.43%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.43%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.65%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.10%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	3.10%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.33%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.55%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.55%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.55%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.78%
Fossill	Environmental → Terrestrial → Soil → Fossil → Unclassified → Fossill	0.78%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.78%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000574	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300002122	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005204	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011428	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT615_2	Environmental	Open in IMG/M
3300012174	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014873	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10D	Environmental	Open in IMG/M
3300014877	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT366_16_10D	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015170	Fossil microbial communities from human bone sample from Teposcolula Yucundaa, Mexico - TP48	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300019865	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s1	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025535	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033432	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fraction	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_02889900	2088090015	Soil	MSHFDRLLQDDLNRLIDRIAVRAGEGTAASLRPDLRAHIERSEERLTVLRAALQESYAEWVRSLDECEDLWAVAGLRCEAPEAVTQLRAA
JGI1357J11328_101648961	3300000574	Groundwater	MNALERLLQDELNRLVDRIAARAGDDAAGGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDSAEAPARISRKAA*
JGI11615J12901_100309212	3300000953	Soil	MSHFDRLLQDDLNRLIDRIAVRAGEGTAASLRPDLRAHIERSEERLTVLRAALQESYAEWVRSLDECEDLWAVAGLRCEAPEAVTQLR
C687J26623_100145883	3300002122	Soil	MNAFEKLLQDELHRLVDRIAARAGDDTAAGLTPDLKARIERCEGXLTELRAALLDGYXEWTRSLEECEDLWAVAGLRKDAAEAPVRISRKAA*
JGIcombinedJ26739_1005420042	3300002245	Forest Soil	MSQFERLLQDDLNRLVDRIAVRAGEGTAAGLKSDLKARIERSEERLTALRAALLDGYAEWARALDECEDLWAVAGLRSEAPEAAAELRAA*
soilL2_102097202	3300003319	Sugarcane Root And Bulk Soil	MSHFDRLLQDDLNRLIDRIAVRAGEGTAAGLKPDLKAHIERSEERLTALRAVLQDAYAEWTRALDECEDVWAVAGLRREASAPVTRLRAA*
soilH2_1000681512	3300003324	Sugarcane Root And Bulk Soil	MSHFDRLLQDDLNRLIDRIAVRAGEGTAAGLKPDLKAHIERSEERLTALRAVLQDAYAEWTXGIDECEDVWAVPASGARRPSP*
Ga0055435_100055403	3300003994	Natural And Restored Wetlands	MSTLERLLQDELNRLVDRIAARAGEDTAAGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDGAEAPARISRKAA*
Ga0055500_101787632	3300004062	Natural And Restored Wetlands	MSTLERLLQDELNRLVDRIAARAGEDTAAGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECEDLWAV
Ga0062593_1000772243	3300004114	Soil	MSHFDRLLQDDLNRLIDRIAVRAGEGTAASLRPDLRAHIERSEERLTVLRAALQESYAEWVRSLDECEDLWAVAGLRCEAPEAVTQLRAA*
Ga0062593_1014307571	3300004114	Soil	ERLLQDELNRLLDRIAVRAGDDSAGGLKSDLRAPIERCEDRLTALRGALLDGYAEWARTIEECEDLWAVAGLRKDGAESPARISRRAA*
Ga0068997_100073801	3300005204	Natural And Restored Wetlands	MSTLERLLQDELNRLVDRIAARAGEDTAAGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDGAEAPPRISRKAA*
Ga0065715_110004142	3300005293	Miscanthus Rhizosphere	MSHFDRLLQDDLNRLIDRIAVRAGEGTAASLRPDLRAHIERSEERLTVLRAALQEAYAEWVRSLDECEDLWAVAGLRCEAPEAVTQLRAA*
Ga0070666_103616942	3300005335	Switchgrass Rhizosphere	MSHFDRLLQDDLNRLIDRIAVRAGEGTAASLRPDLRAHIVRSEERLTVLRAALQESYAEWVRSLDECEDLWAVAGLRCEAPEAVTQLRAA*
Ga0070709_116158131	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSQFERLLQDDLNRLVDRIAVRAGEGTAAGLKSDLKARIERSEERLTALRAALLDGYAEWARALDECEDLWAVAGLRSEAPEAAAQLRAA*
Ga0070701_102866451	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MSHFDRLLQDDLNRLIDRIAVRAGEGTAASLRPDLRAHIERSEERLTVLRAALQESYAEWVRSLDECEDLWAVAGLR
Ga0070711_1005410553	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	QDDLNRLVDRIAVRAGEGTAAGLKSDLKARIERSEERLTALRAALLDGYAEWARALDECEDLWAVAGLRSEAPEAAAQLRAA*
Ga0070705_1004304951	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSHFERLLQDDLNRLVDRIAVRAGEGTAAGLKSDLKARIERSEERLTALRAALLDGYAEWARALDECEDLWAVAGLRSEAPEAAAQLRAA*
Ga0070741_1000097341	3300005529	Surface Soil	MSHFDRLLQDDLDRLIDRIAVRTGEGTAAGLKPDLKAHIERSEERLTALRAVLQDAYAEWTRALEECEDLWAVAGLRREAEPVARLRAA*
Ga0068860_1007417391	3300005843	Switchgrass Rhizosphere	LLQDELNRLLDRIAVRAGDDSAGGLKSDLRAPIERCEDRLTALRGALLDGYAEWARTIEECEDLWAVAGLRKDGAESPARISRRAA*
Ga0070766_105528732	3300005921	Soil	MSHFEALLQDELNRLVDRIAARAGEDTAAGLKPDLKMRIEQSEERLTGLRTVLLDGYAEWTRALGEYEDLWVLAELRRRAEAAPAEAAELRAA*
Ga0075417_104179922	3300006049	Populus Rhizosphere	MNTLETMLQDELNRLLDRIAVRAGEDTTAGLKSDLRAPIERCEDRLTALRAALLDGYAEWTRALEECEDVWAVAGLRKDGAE
Ga0075417_104581892	3300006049	Populus Rhizosphere	MSQFERLLQDDLNRLVDRIAVRAGEGTAAGLKSDLKTHIERSEERLTALRAALLDGYAEWARALDECEDLWAVAGLRSEAPEVAAQLRAA*
Ga0079222_105058603	3300006755	Agricultural Soil	MSHFDRLLQDDLNRLIDRIAVRAGEGTAAGLKPDLKAHIERSEERLTALRAVLQDAYAEWTRALDECEDVWAVAGLRREASEPVTRLRAA*
Ga0079220_104202432	3300006806	Agricultural Soil	MSHFDRLLQDDLNRLIDRIAVRAGEGTAAGLKPDLKAHIERSEERLTALRAVLQDAYAEWTRALDECEDVWAVAGLRREASEPVTQLRAA*
Ga0079220_116260322	3300006806	Agricultural Soil	MSHFERLLQDDLNRLVDRIAARAGDDAATGLKSDLRTRIERSEDRLTVLRAALLDGYAEWGRAIEECEDLWAVAGLRREA
Ga0075421_1010701862	3300006845	Populus Rhizosphere	MNALERLLQDELNRLVDRIAVGAGEDSAAALKPDLKARIERCEDRLTALRAALLDGYGEWIRTVEECEDLWAVAGLRKDGAEAPARISRKAA*
Ga0075431_1009536082	3300006847	Populus Rhizosphere	MNTLERLLQDELNRLVDRIAARAEDDTAGGLKSDLRAHIERCEDRVTALRAALLDGYAEWTRALEECEDLWAVAGL
Ga0075433_101485071	3300006852	Populus Rhizosphere	HFDRLLQDDLNRLIDRIAVRAGEGTAASLRPDLRAHIERSEERLTVLRAALQEAYAEWVRSLDECEDLWAVAGLRCEAPEAVTQLRAA*
Ga0075433_107780472	3300006852	Populus Rhizosphere	MSQFERLLQDDLNRLVDRIAVRAGEGTAAGLKSDLKTHIERSEERLTALRAALLDGYAEWARALDECEDLWAVAGLRSEAP
Ga0075425_1001512452	3300006854	Populus Rhizosphere	MSQFERLLQDDLNRLVDRIAVRAAEGTAAGLKSDLKARIERSEERLTALRAALLDGYAEWARALDECEDLWAVAGLRSEAPEAAAQLRAA*
Ga0075434_1000339894	3300006871	Populus Rhizosphere	MSQFERLLQDDLNRLVDRIAVRAAEGAAAGLKSDLKARIERSEERLTALRAALLDGYAEWARALDECEDLWAVAGLRSEAPEAAAQLRAA*
Ga0099829_100063782	3300009038	Vadose Zone Soil	MNGLERLLQDELNRLVDRIAARAGDDAAAGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALDECEDLWAVAGLRKDSAEAPARISRKAA*
Ga0105095_104403212	3300009053	Freshwater Sediment	MNALERLLQDELNRLVDRIAVRAGEDTAAGLKSDLRAPIERCEERLTALRAALLDGYDEWARTLEECEDLWAVAGLRKDGAEAPARISRKAA*
Ga0099828_100009024	3300009089	Vadose Zone Soil	MNGLERLLQDELNRLVDRIAARAGDDAAAGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDSAEAPARISRKAA*
Ga0105245_129844831	3300009098	Miscanthus Rhizosphere	RLIDRIAVRAGEGTAASLRPDLRAHIERSEERLTVLRAALQESYAEWVRSLDECEDLWAVAGLRCEAPEAVTQLRAA*
Ga0114129_100248346	3300009147	Populus Rhizosphere	MNTLETMLQDELNRLLDRIAVRAGEDTTAGLKSDLRAPIERCEDRLTALRAALLDGYAEWTRALEECEDVWAVAGLRKDGAEAPARISRKAA*
Ga0105238_103153241	3300009551	Corn Rhizosphere	MSHFDRLLQDDLNRLIDRIAVRAGEGTAASLRPDLRAHIERSEERLTVLRAALQESYAEWVRSLDECEDLWA
Ga0136847_100857843	3300010391	Freshwater Sediment	DELNRLLDRIAVRAGEDTAAGLKSDLRAPIERCEERLTALRAALLDGYAEWARTLEECEDLWAVAGLRKDGAAAPARISRIAA*
Ga0134123_100128784	3300010403	Terrestrial Soil	MSHFDRLLQDDLNRLIDRIAVRAGEGTAASLRPDLRAHIERSEERLTVLRAALQESYAEWVRSLDECEDLWAVAGLRCEVPEAVTQLRAA*
Ga0137456_10339971	3300011428	Soil	MNALERLLQDELNRLVDRIAARAGDDAAAGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDSAEAPARISRKAA*
Ga0137338_10105383	3300012174	Soil	MNALERLLQDELNRLVDRIAARAGDDTAGGLKSDLRAHIERGEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDSAEAPARISRKAA*
Ga0137397_100057236	3300012685	Vadose Zone Soil	MNTLETMLQDELNRLLDRIAVRAGEDTSAGLKSDLRAPIERCEDRLTALRAALLDGYAEWTRALEECEDVWAVAGLRKDGAEAPARISRKAA*
Ga0137394_100255565	3300012922	Vadose Zone Soil	MNTLETMLQDELNRLLDRIAVRAGEGTSAGLKSDLRAPIERCEDRLTVLRAALLDGYAEWTRALEECEDVWAVAGLRKDGAEAPARISRKAA*
Ga0137407_101044271	3300012930	Vadose Zone Soil	MNTLETMLQDELNRLLDRIAVRAGEDTSAGLKSDLRAPIERCEDRLTVLRAALLDGYAEWTRALEECEDVWAVAGLRKDGAEAPARISRKAA*
Ga0164298_100186055	3300012955	Soil	MSHFDRLLQDDLNRLIDRIAVRAGEGTAASLRPDLRAHIERSEERLTVLRAALQEAYAEWVRSLDECEDLWAVA
Ga0164306_116847372	3300012988	Soil	MSHFDRLLQDDLNRLIDRIAVRAGEGTAASLRPDLQAHIERSEERLTVLRAALQESYAEWVRSLDECEDLWAVAGLRCEAPEAVTQL
Ga0157375_103499403	3300013308	Miscanthus Rhizosphere	FDRLLQDDLNRLIDRIAARAGEGTAASLRPDLRAHIERSEERLTVLRAALQESYAEWVRSLDECEDLWAVAGLRCEAPEAVTQLRAA*
Ga0075354_10178562	3300014308	Natural And Restored Wetlands	MSTLERLLQDELNRLVDRIAARAGEDTAAGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDGAEAPPRISRTAA*
Ga0157377_109556112	3300014745	Miscanthus Rhizosphere	QDDLNRLIDRIAVRAGEGTAASLRPDLRAHIERSEERLTVLRAALQESYAEWVRSLDECEDLWAVAGLRCEAPEAVTQLRAA*
Ga0180066_10002111	3300014873	Soil	MNALERLLQDELNRLVDRIAARAGDDAAAGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEESEDLWAVAGLRKDSAEAPARISRKAA
Ga0180074_10104311	3300014877	Soil	MNGLERLLQDELNRLVDRIAARAGDDTAGGLKSDLRAHIERGEDRLTALRGALLDGYAEWTRALEECEDLWAVAGLRKDSAEAPARISRKAA*
Ga0180104_10093572	3300014884	Soil	MGGAEMNALERLLQDELNRLVDRIAARAGDDTAGGLKSDLRAHIERGEDRLTALRGALLDGYAEWTRALEECEDLWAVAGLRKDSAEAPARISRKAA*
Ga0120098_10271241	3300015170	Fossill	MSALDRLLQDELNRLVDRIAARVEYDTTAGLKSDLKSRIERCEDRLTALRGALLDGYAEWTRTLEECEDLWAVAGLRKDGAEAPARISRRAA*
Ga0137418_101044613	3300015241	Vadose Zone Soil	MNTLDTMLQDELNRLLDRIAVRAGEDTSAGLKSDLRAPIERCEDRLTVLRAALLDECEDVGAVAGLRKDGAEAPARISRKAA*
Ga0187779_103907702	3300017959	Tropical Peatland	MNPFERLLQDELNRLIDRVAARTGSEGVVDVKPDLKLRIDRSEERLTSLRSALLDGYAVWTRALGEYEDLWLLADLRWQIEAGPAEPGELRAA
Ga0187778_100041004	3300017961	Tropical Peatland	MNPFERLLQDELNRLIDRVAARAGAEGVAGLKADLKLRLDRSEERLTSLRSALLDGYAAWTRALGEYEDLWLLADLRRQIEAGPAEPAELRAA
Ga0187780_106214562	3300017973	Tropical Peatland	MNPFEMLLQDELNRLIDRVAARAGAEGVAGLKADLKLRLDRSEERLTSLRSALLDGYAAWTRALGEYEDLWLLADLRRQIEAGPAEPAELRAA
Ga0187823_101824282	3300017993	Freshwater Sediment	MSHFERLLQDDLNRLVDRIAARAGDDAATGLKSDLRTRIERSEDRLTVLRAALLDGYAEWGRAIEECEDLWAVAGLRREAPAAELRAA
Ga0184610_10324243	3300017997	Groundwater Sediment	MNALERLLQDELNRLVDRIAARAGDDAAAGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDSAEAPARISRKAA
Ga0184608_102290842	3300018028	Groundwater Sediment	MNALERLLQDELNRLVDRIAARAGDDAAAGLKSDLRAHIERGEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDSAEAPARISRKAA
Ga0184638_11867431	3300018052	Groundwater Sediment	MNGLERLLQDELNRLVDRIAARAGDDAAAGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDSAEAPARISRKAA
Ga0184621_100202754	3300018054	Groundwater Sediment	MNALERLLQDELNRLVDRIAARAGDDAAAGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDSAEAPARINRKAA
Ga0187766_109429231	3300018058	Tropical Peatland	MNSFESLLQDELNRLIDRVAVRAGAEGAAGLKADLRLRLDRSEDRLTGLRSALLDGYAAWTRALGEYEDLWVLAELRRQIEAGPAEPAELRAA
Ga0187765_110621262	3300018060	Tropical Peatland	NSFESLLQDELNRLIDRVAVRAGAEGAVGLKADLRLRLDRSEDRLTGLRSALLDGYAAWTRALGEYEDLWVLAELRRQIEAGPAEPAELRAA
Ga0184637_100966631	3300018063	Groundwater Sediment	MNALERLLQDELNRLVDRIAARAGDDAAAGLKSDLRAHIERGEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDSAE
Ga0184640_100343262	3300018074	Groundwater Sediment	MNGLERLLQDELNRLVDRIAARAGDDAAAGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALDECEDLWAVAGLRKDSAEAPARISRKAA
Ga0184629_103626512	3300018084	Groundwater Sediment	MNALERLLQDELNRLVDRIAARAGDDAAAGLKPDLRAHIERCEDRLTALRAALLDGYTEWTRALEECEDLWAVAGLRKDSAEAPDRISRIAA
Ga0190265_100238864	3300018422	Soil	MNALEKLLQDELNRLLDRIAVRVGEDITPGLKSDLRAPIERCEDRLTALRAALLDGYAEWTRTLEECDDLWAVAGLRKDATEAPARFSRKAA
Ga0190265_100355356	3300018422	Soil	MSALDRLLQDELNRLVDRIAARVEDDTTAGLNSDLKSRIERCEDRLTALRGALLDGYAEWTRTLEECEDLWAVAGLRKDGAEAPARISRRAA
Ga0190265_100442623	3300018422	Soil	MNAFEKLLQDELNRLVDRIAAQAGDDAAAGLTPDLKARIDRCEGRLTELRAALLDGYLEWSRTLDECEDLWAVAGLRKDGAEAPARVSRRAA
Ga0190272_101557312	3300018429	Soil	MSALERLLQDELNRLVDRIAARAGDDAAAGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDSAEAPARISRKAA
Ga0184646_10557021	3300019259	Groundwater Sediment	MCQADSRAVDLVDRIAARAGDDAAAGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECDDLWAVAGLRKDSAEAPARISRKAA
Ga0187894_101984872	3300019360	Microbial Mat On Rocks	MNTLERLLQDELNRLVDRIAARAEDDTASGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDNAEAPRISRKAA
Ga0190264_104586793	3300019377	Soil	MSALDRLLQDELNRLVDRIAARVEDDTTAGLNSDLKSRIERCEDRLTALRGALLDCYAEWTRTLEECEDLWAVAGLRKDGAEAPARISRRAA
Ga0187893_101686053	3300019487	Microbial Mat On Rocks	MNTLERLLQDELNRLVDRIAARAEDDTAGGLKSDLRVRIERCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDNAEAPARISRRAA
Ga0187893_102369932	3300019487	Microbial Mat On Rocks	MNTLERLLQDELNRLVDRIAARAEDDTAGGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDNAEAPRISRKAA
Ga0187893_102543382	3300019487	Microbial Mat On Rocks	MNALERLLQDELNRLVDRIAARAGADAAAALRPELRASIDRCEDRLTDLRAALLDGYAEWTRVLEECDDLWVVADLRRDAPEEPARISRRAA
Ga0193748_10225132	3300019865	Soil	MSHFERLLQDDLNRLIDRIAVRAGEGTAAGLKSDLKAHIERAEERLTALRAALLDGYAEWERTMDQCEDLWTLAGLRREAPDEAAQLRAA
Ga0193743_10301723	3300019889	Soil	MNALERLLQDELNRLVDRIAARAGDDAAAGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDSAEAPARISRRAA
Ga0193728_11645002	3300019890	Soil	MSHFERLLQDDLNRLIDRIAVRAGEGTAAGLKSDLKAHIERAEERLTVLRAALLDGYAEWERTMDQCEDLWAL
Ga0193731_10841291	3300020001	Soil	MNTLETMLQDELNRLLDRIAVRAGEDTTAGLKSDLRAPIERCEDRLTALRAALLDGYAEWTRALEECEDVWAVAGLRKDGAEAPARISRKAA
Ga0193739_10050961	3300020003	Soil	RIAARAGDDAAAGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDSAEAPARISRRAA
Ga0193726_10242433	3300020021	Soil	MSHFERLLQDDLNRLIDRIAVRAGEGTAAAGLKSDLKAHIERAEERLTVLRAALLDGYAEWERAMDQCEDLWTLAGLRREAPEEAAQLRAA
Ga0210407_101180633	3300020579	Soil	MSHFEGLLQDELNRLVDRIAARAGEDTAAGLKPDLKMRIEQSEERLTGLRTVLLDGYAEWTRALGEYEDLWVLAELRRRAEAAPAEAAELRAA
Ga0210403_101854262	3300020580	Soil	MSHFEALLQDELNRLVDRIAARAGEDSAAGLKPDLKMRIEQSEERLTGLRTVLLDGYAEWMRALGEYEDLWVLAELRRRAEAAPAEAAELRAA
Ga0210399_103017372	3300020581	Soil	MSHFEALLQDELNRLVDRIAARAGEDTAAGLKPDLKMRIEQSEERLTGLRTVLLDGYAEWMRALGEYEDLWVLAELRRRAEAAPAEAAELRAA
Ga0210378_100130481	3300021073	Groundwater Sediment	MNGLERLLQDELNRLVDRIAARAGDDAAAGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDNAEAPARISRKAA
Ga0210394_108275001	3300021420	Soil	DRIAARAGEDSAAGLKPDLKMRIEQSEERLTGLRTVLLDGYAEWMRALGEYEDLWVLAELRRRAEAAPAEAAELRAA
Ga0210384_106608202	3300021432	Soil	MSQFERLLQDDLNRLVDRIAVRAGEGTAAGLKSDLRTRIERSEERLTALRTALLDGYVEWARALDECEDLWAVAGLRSEAPEVAAQLRAA
Ga0187846_100916562	3300021476	Biofilm	MNPFERLLQDELNRLIDRVAARAGAEGAAGLRADLKLRLDCSEEHLTNLRSALLDGYAAWTRALGEYEDLWLLAELRRQIEAGPAEPAELRAA
Ga0210402_100406383	3300021478	Soil	MSQFERLLQDDLNRLVDRIAVRVGEGTTAGLNSDLKTRIERSEERLTALRAALLDGYAEWARALDECEDLWAVAGLRSEAPEVAAQLRAA
Ga0222623_102302002	3300022694	Groundwater Sediment	MNAFERLLQDELNRLVDRIAARAEDDAAAGLKSDLRAHIERGEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDGAEAP
Ga0209108_103772582	3300025165	Soil	MNAFEKLLQDELHRLVDRIAARAGDDTAAGLTPDLKARIERCEGHLTELRAALLDGYVEWTRSLEECEDLWAVAGLRKD
Ga0207656_104725212	3300025321	Corn Rhizosphere	SHFDRLLQDDLNRLIDRIAVRAGEGTAASLRPDLRAHIERSEERLTVLRAALQESYAEWVRSLDECEDLWAVAGLRCEAPEAVTQLRAA
Ga0209640_100144744	3300025324	Soil	MNAFEKLLQDELHRLVDRIAARAGDDTAAGLTPDLKARIERCEGHLTELRAALLDGYVEWTRSLEECEDLWAVAGLRKDAAEAPVRISRKAA
Ga0209640_100441474	3300025324	Soil	MNALERLLQDELNRLVDRIAARAGDDTAGGLKSDLRAHIERCEDRLTALRVALLDGYAEWTRALEGCEDLWAVAGLRKDSAEAPARISRKAA
Ga0207423_10039622	3300025535	Natural And Restored Wetlands	MSTLERLLQDELNRLVDRIAARAGEDTAAGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDGAEAPARISRKAA
Ga0207680_108299782	3300025903	Switchgrass Rhizosphere	MSHFDRLLQDDLNRLIDRIAVRAGEGTAASLRPDLRAHIVRSEERLTVLRAALQESYAEWVRSLDECEDLWAVAGLRCEAPEAVTQLRAA
Ga0207684_104393992	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSHFDRLLQDDLNRLIDRIAVRAGEGTAASLRPDLRAHIERSEERLTVLRAALQEAYAEWVRSLDECEDLWAVAGLRCEAPEAVTQLRAA
Ga0207681_104927302	3300025923	Switchgrass Rhizosphere	MSHFDRLLQDDLNRLIDRIAVRAGEGTAASLRPDLGAHIERSEERLTVLRAALQESYAEWVRSLDECEDLWAVAGLRCEAPEAVTQLRAA
Ga0207706_106978752	3300025933	Corn Rhizosphere	MSHFDRLLQDDLNRLIDRIAVRAGEGTAASLRPDLRAHIERSEERLTVLRAALQESYAEWVRSLDECEDLWAVAGLRCEAPEAVDQDRR
Ga0207670_101339694	3300025936	Switchgrass Rhizosphere	LIDRIAVRAGEGTAASLRPDLRAHIERSEERLTVLRAALQESYAEWVRSLDECEDLWAVAGLRCEAPEAVTQLRAA
Ga0209158_12401911	3300026333	Soil	FERLLQDDLNRLVDRIAVRVGEGTAAGLKSDLKTRIERSEERLTALRAALLDGYAEWARALDECEDLWAVAGLRSEAPEVAAQLRAA
Ga0256867_100246963	3300026535	Soil	MNMLERLLQDELNHMIDRIATRAGEDTAADLRSDLKAHIERTEDRLTALRTALLDGYAEWTRTLDECEDLWAVAGLRKDGAEAPGRISRRAA
Ga0209331_11015742	3300027603	Forest Soil	MSHFERLLQDDLNRLVDRIAVRAGEGTAAGLKSDLKARIERSEERLTALRAALLDGYAEWARALDECEDLWAVAGLRSEAPEAA
Ga0209217_10306382	3300027651	Forest Soil	MSQFERLLQDDLNRLVDRIAVRAGEGTAAGLKSDLKARIERSEERLTALRAALLDGYAEWARALDECEDLWAVAGLRSEAPEAAAELRAA
Ga0209726_100630942	3300027815	Groundwater	MNALERLLQDELNRLVDRIAARAGDDAAGGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDSAEAPARISRKAA
Ga0209814_102259572	3300027873	Populus Rhizosphere	MSQFERLLQDDLNRLVDRIAVRAGEGTAAGLKSDLKTHIERSEERLTALRAALLDGYAEWARALDECEDLWAVAGLRSEAPEVAAQLRAA
Ga0209814_103387191	3300027873	Populus Rhizosphere	MNTLETMLQDELNRLLDRIAVRAGEDTTAGLKSDLRAPIERCEDRLTALRAALLDGYAEWTRALEECEDVWAVAGLRKD
Ga0209382_109425141	3300027909	Populus Rhizosphere	MSHFDRLLQDDLNRLIDRIAVRAGEGTAASLRPDLRAHIERSEERLTVLRAALQEAYAEWVRSLDECEDLWAVAGLRCEAP
Ga0307320_104697271	3300028771	Soil	LQDELNRLLDRIAVRAGEDTTAGLKSDLRAPIERCEDRLTALRAALLDGYAEWTRALEECEDVWAVAGLRKDGAEAPARISRKAA
Ga0307312_104358062	3300028828	Soil	MSHFERLLQDDLNRLIDRIAVRAGEGTAAGLKSDLKAHIERAEERLTVLRAALLDGYAEWERTMDQCEDLWTLAGLRREAPDEAAQLRAA
Ga0308309_115436532	3300028906	Soil	MSHFEALLQDELNRLVDRIAARAGEDTAAGLKPDLKMRIEQSEERLTGLRTVLLDGYAEWTRALGEYEDLWVLAELRRRAEAAPAEAAELRAA
Ga0222749_104687772	3300029636	Soil	MSHFEALLQDELNRLVDRIAARAGEDSAAGLKPDLKMRIEQSEERLTGLRTVLLDGYAEWTRALGEYEDLWVLAELRRRAEAAPAEAAELRAA
Ga0299907_102950602	3300030006	Soil	MNMLERLLQDELNHMIDRIATRAGEDTAAGLRSDLKAHIEGTEDRLTALRTVLLDGYAEWTRALDECEDLWAVAGLRKDGAEAPGRISRRAA
Ga0247826_112150161	3300030336	Soil	LLQDDLNRLIDRIAVRAGEGTAASLRPDLRAHIERSEERLTVLRAALQESYAEWVRSLDECEDLWAVAGLRCEAPEAVTQLRAA
Ga0302046_104311151	3300030620	Soil	HMIDRIATRAGEDTAAGLRSDLKAHIEGTEDRLTALRTALLDGYAEWTRTLDECEDLWAVAGLRKDGAEAPGRISRRAA
(restricted) Ga0255310_101360412	3300031197	Sandy Soil	MNTFEKLLQDELHRLVDRIAARAGDDTAAGLTPDLKARIERCEGRLTELRAALLDGYVEWTRSLEECEDLWAVAGLRKDAAEAPVRISRKAA
Ga0307468_1003059142	3300031740	Hardwood Forest Soil	MSQFERLLQDDLNRLVDRIAVRAGEGTAAGLKSDLRTRIERSEERLTALRAALLDGYAEWARALDECEDLWAVAGLRSEAPEAAAQLRAA
Ga0307479_100976013	3300031962	Hardwood Forest Soil	MSQFERVLQDDLNRLVDRIAVRAGEGTAAGLKSDLKARIERSEERLTALRAALLDGYAEWARALDECEDLWAVAGLRSEAPEAAAQLRAA
Ga0307470_100461352	3300032174	Hardwood Forest Soil	MSQFERLLQDDLNRLVDRIAVRAGEGTAAGLKSDLKTRIERSEERLTALRAALLDGYAEWARALDECEDLWAVAGLRSEAPEAAAQLRAA
Ga0307471_1005051252	3300032180	Hardwood Forest Soil	MSQFERLLQDDLNRLVDRIAVRAGEGTAAGLKSDLKTRIERSEERLTALRAALLDGYAEWARALDECEDLWAVAGLRSEAPEVAAQLRAA
Ga0307471_1012796032	3300032180	Hardwood Forest Soil	MSHFERLLQDELNRLVDRIAARAGEDTAAGLKPDLKMRIEQSEERLTGLRTALLDGYAEWTRALGEYEDLWVLA
Ga0307471_1014633962	3300032180	Hardwood Forest Soil	MSHFEALLQDELNRLVDRIAARTGEDTAAGLKPDLKMRIEQSEERLTGLRTVLLDGYAEWTRALGEYEDLWVLAELRRRAEAAPAEAAELRAA
Ga0307472_1012806671	3300032205	Hardwood Forest Soil	MSQFERLLQDDLNRLVDRIAVRVGEGTAAGLKSDLKTRIERSEERLTALRAALLDGYAEWARALDECEDLWAVAGLRS
Ga0326729_10687462	3300033432	Peat Soil	MNHFERLLQDDLNRMVDRIAVRAGEGTAAGLKSDLKTRIERAEDRLTVLRAALLDGYAEWAQAIGECEDLWAL
Ga0364940_0058995_146_424	3300034164	Sediment	MNGLERLLQDELNRLVDRIAARSGDDAAAGLKSDLRVHIEGCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRKDSAEAPARISRKAA
Ga0364931_0197731_3_236	3300034176	Sediment	MNGLERLLQDELNRLVDRIAARAGDDAAAGLKSDLRAHIERCEDRLTALRAALLDGYAEWTRALEECEDLWAVAGLRK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters