Metagenome / Metatranscriptome Family F063574

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063574
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	96 residues
Representative Sequence	VSLHGNPIVETAHLPDGRNAHIRVGIAEDPYIADRDSNTVVLEVRIGHAVVAVIDTVLDAQQVDEARHLANRVREGLSSGSLEPTVHSLEPLADAVL
Number of Associated Samples	93
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	27.13 %
% of genes near scaffold ends (potentially truncated)	25.58 %
% of genes from short scaffolds (< 2000 bps)	88.37 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.566 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.178 % of family members)
Environment Ontology (ENVO)	Unclassified (20.155 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.837 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.60% β-sheet: 29.60% Coil/Unstructured: 44.80%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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SCOP family	SCOP domain	Representative PDB	TM-score
e.29.1.1: beta and beta-prime subunits of DNA dependent RNA-polymerase	d4c2mb_	4c2m	0.65
e.29.1.1: beta and beta-prime subunits of DNA dependent RNA-polymerase	d4c2mb_	4c2m	0.65
b.69.4.3: WD40 repeat-like	d2b5la1	2b5l	0.62
b.69.4.3: WD40 repeat-like	d2b5la1	2b5l	0.62
b.68.1.1: Sialidases	d1nsca_	1nsc	0.61
b.69.12.1: Sema domain	d1olza2	1olz	0.61
b.69.4.3: WD40 repeat-like	d2b5la4	2b5l	0.61
b.68.1.1: Sialidases	d1nsca_	1nsc	0.61
b.69.12.1: Sema domain	d1olza2	1olz	0.61
b.69.4.3: WD40 repeat-like	d2b5la4	2b5l	0.61

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00248	Aldo_ket_red	9.30
PF00300	His_Phos_1	4.65
PF13462	Thioredoxin_4	3.10
PF13180	PDZ_2	2.33
PF03176	MMPL	2.33
PF13671	AAA_33	2.33
PF04679	DNA_ligase_A_C	2.33
PF01019	G_glu_transpept	1.55
PF00903	Glyoxalase	1.55
PF01625	PMSR	1.55
PF00291	PALP	1.55
PF02597	ThiS	1.55
PF12464	Mac	0.78
PF01638	HxlR	0.78
PF00296	Bac_luciferase	0.78
PF00210	Ferritin	0.78
PF13520	AA_permease_2	0.78
PF00881	Nitroreductase	0.78
PF01810	LysE	0.78
PF03006	HlyIII	0.78
PF02148	zf-UBP	0.78
PF13577	SnoaL_4	0.78
PF13419	HAD_2	0.78
PF13796	Sensor	0.78
PF05974	DUF892	0.78
PF03992	ABM	0.78
PF01323	DSBA	0.78
PF08327	AHSA1	0.78
PF09335	SNARE_assoc	0.78
PF11154	DUF2934	0.78
PF08818	DUF1801	0.78
PF01828	Peptidase_A4	0.78
PF07099	DUF1361	0.78
PF04675	DNA_ligase_A_N	0.78
PF05362	Lon_C	0.78
PF01434	Peptidase_M41	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	3.10
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	2.33
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	2.33
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	1.55
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	1.55
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	1.55
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	1.55
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.78
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG5207	Uncharacterized Zn-finger protein, UBP-type	General function prediction only [R]	0.78
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.78
COG4330	Uncharacterized membrane protein, DUF1361 domain	Function unknown [S]	0.78
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.78
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	0.78
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.78
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	0.78
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.78
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	0.78
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.78
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.57 %
Unclassified	root	N/A	36.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.57 %
Unclassified	root	N/A	36.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.57 %
Unclassified	root	N/A	36.43 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	40.31 %
Unclassified	root	N/A	36.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.58 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12.40 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.30 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.33 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.78 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.78 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.78 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.78 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.30 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.33 %
Pararhodospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Pararhodospirillum	0.78 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.78 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.78 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.78 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.30 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.33 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.78 %
Pararhodospirillum photometricum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Pararhodospirillum → Pararhodospirillum photometricum	0.78 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.78 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.30 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.33 %
Actinomadura montaniterrae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura montaniterrae	0.78 %
Streptomyces tendae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces tendae	0.78 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.78 %
Pararhodospirillum photometricum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Pararhodospirillum → Pararhodospirillum photometricum	0.78 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459013\|GO6OHWN02FSAK4	Not Available	511	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105021753	Not Available	883	Open in IMG/M
3300000956\|JGI10216J12902_100357991	All Organisms → cellular organisms → Bacteria → Terrabacteria group	538	Open in IMG/M
3300000956\|JGI10216J12902_109036694	All Organisms → cellular organisms → Bacteria → Terrabacteria group	980	Open in IMG/M
3300000956\|JGI10216J12902_111412135	All Organisms → cellular organisms → Bacteria → Terrabacteria group	800	Open in IMG/M
3300004080\|Ga0062385_10728405	Not Available	642	Open in IMG/M
3300004081\|Ga0063454_100012045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Pararhodospirillum → Pararhodospirillum photometricum	2387	Open in IMG/M
3300004114\|Ga0062593_100141379	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1804	Open in IMG/M
3300004114\|Ga0062593_103515296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	503	Open in IMG/M
3300004153\|Ga0063455_100068188	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1315	Open in IMG/M
3300004479\|Ga0062595_100089330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1593	Open in IMG/M
3300004479\|Ga0062595_100957113	Not Available	729	Open in IMG/M
3300004479\|Ga0062595_102101028	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300004479\|Ga0062595_102662597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	503	Open in IMG/M
3300004643\|Ga0062591_100399754	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300005093\|Ga0062594_101748838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	652	Open in IMG/M
3300005093\|Ga0062594_103009046	Not Available	526	Open in IMG/M
3300005184\|Ga0066671_10489299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	789	Open in IMG/M
3300005332\|Ga0066388_100113023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3216	Open in IMG/M
3300005332\|Ga0066388_102669817	All Organisms → cellular organisms → Bacteria → Terrabacteria group	911	Open in IMG/M
3300005332\|Ga0066388_102707064	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300005332\|Ga0066388_105640384	All Organisms → cellular organisms → Bacteria → Terrabacteria group	633	Open in IMG/M
3300005435\|Ga0070714_100146471	All Organisms → cellular organisms → Bacteria	2125	Open in IMG/M
3300005435\|Ga0070714_101265018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	720	Open in IMG/M
3300005439\|Ga0070711_100575644	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300005450\|Ga0066682_10728179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces tendae	606	Open in IMG/M
3300005468\|Ga0070707_101612211	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300005529\|Ga0070741_10016395	All Organisms → cellular organisms → Bacteria	12361	Open in IMG/M
3300005529\|Ga0070741_10031183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7428	Open in IMG/M
3300005529\|Ga0070741_11669391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300005533\|Ga0070734_10294732	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300005534\|Ga0070735_10802632	Not Available	554	Open in IMG/M
3300005546\|Ga0070696_100725285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	812	Open in IMG/M
3300005610\|Ga0070763_10605960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	635	Open in IMG/M
3300005713\|Ga0066905_100400027	Not Available	1114	Open in IMG/M
3300005764\|Ga0066903_100042893	All Organisms → cellular organisms → Bacteria	5371	Open in IMG/M
3300005764\|Ga0066903_100155616	All Organisms → cellular organisms → Bacteria	3298	Open in IMG/M
3300005764\|Ga0066903_100503673	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2053	Open in IMG/M
3300005764\|Ga0066903_100656676	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1835	Open in IMG/M
3300005764\|Ga0066903_101515488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1267	Open in IMG/M
3300005764\|Ga0066903_101641943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1221	Open in IMG/M
3300005764\|Ga0066903_102512854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	997	Open in IMG/M
3300005764\|Ga0066903_103232182	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300005764\|Ga0066903_104168360	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300005764\|Ga0066903_107154125	All Organisms → cellular organisms → Bacteria → Terrabacteria group	578	Open in IMG/M
3300006031\|Ga0066651_10360156	All Organisms → cellular organisms → Bacteria → Terrabacteria group	779	Open in IMG/M
3300006034\|Ga0066656_10491577	All Organisms → cellular organisms → Bacteria → Terrabacteria group	800	Open in IMG/M
3300006034\|Ga0066656_11036414	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300006046\|Ga0066652_101437383	Not Available	643	Open in IMG/M
3300006755\|Ga0079222_10977602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura montaniterrae	724	Open in IMG/M
3300006804\|Ga0079221_10953158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300006852\|Ga0075433_10231232	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300006854\|Ga0075425_101152832	All Organisms → cellular organisms → Bacteria → Terrabacteria group	882	Open in IMG/M
3300006854\|Ga0075425_102554732	Not Available	565	Open in IMG/M
3300006871\|Ga0075434_102503433	Not Available	517	Open in IMG/M
3300006871\|Ga0075434_102508728	Not Available	517	Open in IMG/M
3300006871\|Ga0075434_102569315	Not Available	510	Open in IMG/M
3300009137\|Ga0066709_101061061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1189	Open in IMG/M
3300009147\|Ga0114129_11425977	All Organisms → cellular organisms → Bacteria → Terrabacteria group	854	Open in IMG/M
3300009162\|Ga0075423_10056451	All Organisms → cellular organisms → Bacteria	4054	Open in IMG/M
3300010047\|Ga0126382_11639985	Not Available	598	Open in IMG/M
3300010362\|Ga0126377_11737162	All Organisms → cellular organisms → Bacteria → Terrabacteria group	699	Open in IMG/M
3300010366\|Ga0126379_13016587	All Organisms → cellular organisms → Bacteria → Terrabacteria group	563	Open in IMG/M
3300010373\|Ga0134128_13027213	Not Available	517	Open in IMG/M
3300010379\|Ga0136449_102320839	Not Available	777	Open in IMG/M
3300012198\|Ga0137364_11025638	Not Available	623	Open in IMG/M
3300012208\|Ga0137376_10929508	Not Available	746	Open in IMG/M
3300012212\|Ga0150985_120412761	Not Available	758	Open in IMG/M
3300012955\|Ga0164298_11324117	Not Available	553	Open in IMG/M
3300012985\|Ga0164308_10622450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	921	Open in IMG/M
3300013104\|Ga0157370_11658451	Not Available	574	Open in IMG/M
3300014168\|Ga0181534_10560431	Not Available	653	Open in IMG/M
3300014658\|Ga0181519_10291492	Not Available	1014	Open in IMG/M
3300015371\|Ga0132258_10959866	All Organisms → cellular organisms → Bacteria	2159	Open in IMG/M
3300015371\|Ga0132258_11250813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1876	Open in IMG/M
3300015371\|Ga0132258_11792346	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M
3300015371\|Ga0132258_12675176	All Organisms → cellular organisms → Bacteria	1245	Open in IMG/M
3300015372\|Ga0132256_102545727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	613	Open in IMG/M
3300015373\|Ga0132257_103346355	Not Available	584	Open in IMG/M
3300016341\|Ga0182035_10288278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1341	Open in IMG/M
3300017966\|Ga0187776_10809072	Not Available	673	Open in IMG/M
3300017974\|Ga0187777_10366900	Not Available	992	Open in IMG/M
3300018433\|Ga0066667_12152860	Not Available	518	Open in IMG/M
3300020082\|Ga0206353_10984212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1602	Open in IMG/M
3300021432\|Ga0210384_10589394	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300025901\|Ga0207688_10948615	Not Available	544	Open in IMG/M
3300025916\|Ga0207663_10464647	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300025922\|Ga0207646_11590099	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300025929\|Ga0207664_10120004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2199	Open in IMG/M
3300027908\|Ga0209006_10484891	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300028800\|Ga0265338_10798085	Not Available	647	Open in IMG/M
3300029999\|Ga0311339_11387719	Not Available	632	Open in IMG/M
3300031023\|Ga0073998_11690259	Not Available	514	Open in IMG/M
3300031234\|Ga0302325_10078044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6351	Open in IMG/M
3300031236\|Ga0302324_101536257	Not Available	862	Open in IMG/M
3300031544\|Ga0318534_10781070	Not Available	537	Open in IMG/M
3300031564\|Ga0318573_10330827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	817	Open in IMG/M
3300031670\|Ga0307374_10130204	Not Available	2035	Open in IMG/M
3300031680\|Ga0318574_10656192	Not Available	615	Open in IMG/M
3300031708\|Ga0310686_107626462	Not Available	632	Open in IMG/M
3300031723\|Ga0318493_10246912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	953	Open in IMG/M
3300031747\|Ga0318502_10954309	Not Available	522	Open in IMG/M
3300031765\|Ga0318554_10854953	Not Available	508	Open in IMG/M
3300031781\|Ga0318547_10773058	Not Available	598	Open in IMG/M
3300031831\|Ga0318564_10525815	Not Available	513	Open in IMG/M
3300031846\|Ga0318512_10693580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300031896\|Ga0318551_10105102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1507	Open in IMG/M
3300031938\|Ga0308175_101918132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	664	Open in IMG/M
3300032060\|Ga0318505_10507450	Not Available	569	Open in IMG/M
3300032064\|Ga0318510_10084789	Not Available	1183	Open in IMG/M
3300032064\|Ga0318510_10257016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300032066\|Ga0318514_10666172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	554	Open in IMG/M
3300032089\|Ga0318525_10328131	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300032261\|Ga0306920_102346844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300032261\|Ga0306920_102538904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
3300032770\|Ga0335085_10216949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2328	Open in IMG/M
3300032770\|Ga0335085_11275417	Not Available	777	Open in IMG/M
3300032782\|Ga0335082_10877394	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300032783\|Ga0335079_10065500	All Organisms → cellular organisms → Bacteria	4140	Open in IMG/M
3300032805\|Ga0335078_10391873	All Organisms → cellular organisms → Bacteria	1827	Open in IMG/M
3300032892\|Ga0335081_10471323	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300032892\|Ga0335081_11850960	Not Available	651	Open in IMG/M
3300032893\|Ga0335069_11795868	Not Available	651	Open in IMG/M
3300032897\|Ga0335071_10346709	Not Available	1438	Open in IMG/M
3300032897\|Ga0335071_11159771	Not Available	718	Open in IMG/M
3300032897\|Ga0335071_11252806	Not Available	687	Open in IMG/M
3300032898\|Ga0335072_10650035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1046	Open in IMG/M
3300033158\|Ga0335077_10425112	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300033158\|Ga0335077_12196533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.05%
Host-Associated	Host-Associated	13.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.72%
Plants	Host-Associated → Plants	13.95%
Aquatic	Environmental → Aquatic	2.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.53%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.43%
Freshwater	Environmental → Aquatic → Freshwater	2.33%
Peat	Environmental → Terrestrial → Peat	2.33%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.29%
Loam	Environmental → Terrestrial → Soil → Loam	20.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.55%
Clay	Environmental → Terrestrial → Soil → Clay	0.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.40%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.08%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.33%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.55%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.63%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	10.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.20%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.33%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.55%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.55%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.55%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.55%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031023	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N57_07155050	2170459013	Grass Soil	LHGNPIHETAHLPDGRHAHIRVGIAEDSYIADRDLNTVVLEVRIGNGVVAALDTILDAEQVSEARHLANRVRDGLHEGSLEPTAHSLGPLTDELL
INPhiseqgaiiFebDRAFT_1050217533	3300000364	Soil	VSLHGNPIVETAQLPDGRNARIRVGVAEDPYIADRDLNTVVLEVRIGNDVAAVIDTVLDAAQVDAARHLATHVRDGLSSGELEPSVHSLERLADEVL*
JGI10216J12902_1003579911	3300000956	Soil	VSLHGNPIVETAHLPDGRNAHIRVGIAEDPYIADRDSNTVVLEVRIGHAVVAVIDTVLDAQQVDEARHLANRVREGLSSGSLEPTVHSLEPLADAVL
JGI10216J12902_1090366941	3300000956	Soil	VSLHGNPVVETAHLPDGRNARIRVGMAEDSYISDRDTNTVVLEVRIGQAVVAVLDTVLDARQVDEARHLANRVREGLSSGSLEPTVHSLEPLADAVL*
JGI10216J12902_1114121352	3300000956	Soil	VSLHGNPIVETAHLPDGRNARIRVGMAEDSYIADRDTNTVVLEVRVGQAVVAVVDTVLDGRQVDEARHLATLVREGLSSGSLEPTVHSLEPLANAVL*
Ga0062385_107284051	3300004080	Bog Forest Soil	LHGNPIVESAHLPDGRQARIRVGVAEDPYIADRDLSTVVLEVRIGNGVVAVLDTILDPAQVEEAKHLADRVRDGLHSGELEPTAHSLGPLTDELL*
Ga0063454_1000120453	3300004081	Soil	MQPRPIRSSNPSSHPEPRPQSLCRVVYKAVVSLHGNPIVESAHLPDGRNAHIRVGMAEDPYIADRDTNTVVLEVRIGHAVVAVVDTVLDARQVDEARHLATRVREGLSSGSLEPTVHSLEPLADAVL*
Ga0062593_1001413792	3300004114	Soil	VSLHGNPIVETAHLPDGRNARIRVGLAEDPYIADRDMNTVVLEVRVGDAVLAVLDTVLDARQVDEARHLASRVREGLSSGSLEPTVHSLEPLADAVL*
Ga0062593_1035152961	3300004114	Soil	RNAHIRVGIAEDSYVADRELNTVVLEVRVGHGVAAVIDTVLDGDQVDAARHLAARVRDGLASGELEPNASSLERLADSVL*
Ga0063455_1000681882	3300004153	Soil	VYKAVVSLHGNPIVESAHLPDGRNAHIRVGMAEDPYIADRDTNTVVLEVRIGHAVVAVVDTVLDARQVDEARHLATRVQEGLSSGSLEPTVHSLEPLADAVL*
Ga0062595_1000893303	3300004479	Soil	MSLHGNPIVEHAHLPDGRNARIRIGIAEDSYVADRDLNTVTLDIRIGNNVAAVMDTVLDAEQVDEARHLAQRVREGLSSGELQPTTHSLEPFADEIL*
Ga0062595_1009571132	3300004479	Soil	VSLHGNPIIETARLPDGRQARIRVGVAEDSYIADRDSNTVVLEVRIGPGVAAVLDTVLDPDQVSEARHLAARVHEGLSSGTLQPTASSLEPLTDEFL*
Ga0062595_1021010282	3300004479	Soil	MSLHGNPIVETAHLPDGRNARIRVGIAEDSYVADRDLNTVVLEVRVGNGVAAVIDTVLDADQVDAARHLATRVRDGLSSGELEPTTHALERLADSVL*
Ga0062595_1026625971	3300004479	Soil	GSCKNARVSLHGNPIHETARLPDGGEVTIRVGIAEDSYIADKDLNTVVLEVRVGRSVVATLDTILGADQVDEARHLANRVREGLSSGELEPTAHSLGPLTDELL*
Ga0062591_1003997542	3300004643	Soil	VSLHGNPVIETTHLPDGRNAHIRVGIAEDSYVADRLLNTVVLEVRVGHGVAAVIDTVLDGDQVDAARHLAARVRDGLASGELEPNASSLERLADSVL*
Ga0062594_1017488381	3300005093	Soil	DRAVSLHGNPITDTARLPDGRVAEIRVGIAEDPYIADRDLDTVVLEVRVGHEVEAVIDTILGGSHVTEAEHLVTRVRDGLASGELQPTAASLEPLADSLL*
Ga0062594_1030090461	3300005093	Soil	VTLHANPIVETAHLPDGREAQIRVGIAEDSYVADSDLNTVVLEVRIGHGVVAVVDTILSADQVTEARHLATRVREGLSDGSLAPTAHALGPLTDELL*
Ga0066671_104892992	3300005184	Soil	VSLHGNPIVENAHLPDGRNAQIHVGVAEDPYIADRDMNTVVLEVRIGRGVEAVIDTVLEPSQVTEARHLADRVREGLSSGELKPTTSSLERLADEIL*
Ga0066388_1001130232	3300005332	Tropical Forest Soil	VSLHGNPILETAHLPDGRNARIRVGIAEDPYVADRDLNTVVLEVRIGHAVAAVIDTVLDAQQEDEARHLANRVREGLSSGSLEPTVHSLEPLADAVL*
Ga0066388_1026698172	3300005332	Tropical Forest Soil	VSLHGNPIHESAHLPDGRNASIRVGIAEDPYIADRDSNTVVLEVRIGHAVVAVIDTVLDAQQVDEARHLANRVREGLSSGSLEPTVHSLEPLADAIL*
Ga0066388_1027070642	3300005332	Tropical Forest Soil	MTGTARLPDGREASIRVGIAEDSYVADRDLNTVVLEVRIGHAVAAVVDTILDASHVSEARHLLARVRDGLSSGELQPTVASLEPL
Ga0066388_1056403841	3300005332	Tropical Forest Soil	VSLHGNPIFESAHLPDGRNAHIRVGIAQDPYIADRDSNTVVLEVRIGHAVAAVIDTVLDASQVDEARHLANRVRDGLSSGALEPTVHSLEPLADAVL*
Ga0070714_1001464711	3300005435	Agricultural Soil	HGNPIVEHAHLPDGRNARIRIGIAEDSYVADRDLNTVTLDIRIGNNVAAVMDTVLDAEQVDEARHLAQRVREGLSSGELQPTTHSLEPFADEIL*
Ga0070714_1012650182	3300005435	Agricultural Soil	VSLHGHPIHETARLPHGGEVTIRVGIAEDPYIADKDLNTVVLEVRVGRSVLVALDTILDAEQVDQARHLAERVRDGLSSGELEPTAHSLGPLTDELL*
Ga0070711_1005756442	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VSLHGNPVHEKAHLPGGGEVTIRVGLAEDPYIADKDMNTVVLEVRIGRSVVAVLDTILDAEQVTEARHLAERVRDGLSAGELEPTAHSLGPLTDELL*
Ga0066682_107281792	3300005450	Soil	VHLPDGRNASVRVGIAEDSYIPDRELNTVVLEVRVGHGVAAVIDTVLDAEQVDAARHLANRVRDGLASGELEPTVHALERLADSVL*
Ga0070707_1016122111	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VSLHGNPIIETADLPDGRQAHIRVGIAEDSYVADRELDTVVLEVRIEHDVVAVLDTILNGDQVTEAQHLATRVRDGLSDGSLAPTSHSLGPLTDEFL*
Ga0070741_100163952	3300005529	Surface Soil	VTLHGNPVIESAHLPDGRNARIRVGIAEDSYVADRDLNTVVLEVRIGRSVAAVIDTVLNADQVDAARHLATRVRDGLASGELSPLASSLERLADEVL*
Ga0070741_100311836	3300005529	Surface Soil	VSLHGNPVFESAHLPDGRNARIRVGIAEDPYVADKDSTTVVLEVRVGNGVAAVIDTVLAPDQVEAARHLAARVRDGLASGDLEPATSSLERLADEVL*
Ga0070741_116693912	3300005529	Surface Soil	VTLHGNPVIESAHLPDGRNARIRVGIAEDSYVADRDLNTVVLEVRIGHSVAAVIDTVLNADQVDAARHLATRVRDGLASGELSPSASSLERLADEVL*
Ga0070734_102947322	3300005533	Surface Soil	VSLHGNPINETARLPDGREVTVHVGILEDPYIADRDLNTVVLELRAGHGVLASVTTILDADQESEAKHLADRVVEGLHSGELEPHASALERLADEIL*
Ga0070735_108026322	3300005534	Surface Soil	VSLHGNPVVEMARLPDGREARIRVGVAEDPYIADAELNTIVLEVRIGRGVVAVLDTILDAEQVSEARHLAGRVKEGLSSGELKPTASSLGPLTDELL*
Ga0070696_1007252852	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VSLHGNPILESAHLPDGRNARIRVGIAEDSYIADRDSNTVVLEVRVGHGVAAVIDTVLDADQVDAARHLANRVRDGLSSGELEPTVHALERLADSVL*
Ga0070763_106059602	3300005610	Soil	VSLHGNPILETARLPDGREARIRVGVAEDPYIADRDMNTVVLELRLGRGVAAALDTILDPAQVSEARHLAERVREGLSSGA
Ga0066905_1004000272	3300005713	Tropical Forest Soil	VSLHGNPILETAHLPDGRNARIRVGIAEDPYIADRDLNTVVLEVRIGHAVAAVIDTVLDAQQEDEARHLANRVREGLSSGALEPTVHSLEPLADAVL*
Ga0066903_1000428933	3300005764	Tropical Forest Soil	MTGTARLPDGREASIRVGIAEDSYVADRDLNTVVLEVRIGHAVAAVIDTILDASHVSEARHLLTRVRDGLSSGELQPTVASLEPLADTLL*
Ga0066903_1001556161	3300005764	Tropical Forest Soil	VSLHGNPVHETARLPGGGEVTIRVGIAEDSYIADKDMNTVVLEVRVGRSVVATLDTILDADQVDEARHLAERVRDGLSSGELEPTA
Ga0066903_1005036732	3300005764	Tropical Forest Soil	VSLHGNPIFESAQLPDGRNAHIRVGIAEDPYIADRDSNTVVLEVRIGNAVAAVIDTVLDASQVDEARHLANRVREGLSSGALEPTVHSLEPLADAVL*
Ga0066903_1006566762	3300005764	Tropical Forest Soil	VSLHGNPIFESAHLPDGRNAHIRVGIAEDPYIADRDSNTVVLEVRIGNAVAAVVDTVLDASQVDEARHLANRVREGLSSGALEPTVHSLEPLADAVL*
Ga0066903_1015154882	3300005764	Tropical Forest Soil	VSLHGNPVHETAHLPNGGEVSIRVGIAEDPYIADKDLNTVVLEVRVGRSVVATLDTILDAQQVDEARHLAERVRDGLRTGELEPTAHSLGPLTDELL*
Ga0066903_1016419431	3300005764	Tropical Forest Soil	MSLHGNPIVESAHLPDGRNARIRVGVAQDSYIPDSESHTVVLEVHIGNAVTAVIDTILDPVQVDAARHLATRVRDGLSSGELEPTTSSLERLADAIL*
Ga0066903_1025128542	3300005764	Tropical Forest Soil	VTLHGNPIHETARLPDGREATIRVGIAEDPYIADKDLNTVVLEVKVGRGVLAVLDTILDADQVDQARHLARRVRDGLSTGELQPTAHSLGPLTDELL*
Ga0066903_1032321822	3300005764	Tropical Forest Soil	VTLHGNPIHETARLPDGREATIRVGIAEDPYIADKDLNTVVLEVRVGRGVLAVLDTILDADQVTEARHLAERVRDGLRSGELQPTAHSLGPLTDEVL*
Ga0066903_1041683602	3300005764	Tropical Forest Soil	VSLHGNPVHEKARLPNGGEVTIRVAIAEDSYIADKDMNTVVLEVRVGRSVVVTLDTILDAEQVDEARHLAERVRDGLSSGELEPTAHSLGPLTDELL*
Ga0066903_1071541252	3300005764	Tropical Forest Soil	VSLHGNPILETAHLPDGRNARIRVGIAEDPYIADRDSNTVVLEVRVGHAVVAVVDTVLDAAQVDEARHLANRVREGLSSGSLEPTVHSLEPLADAVL*
Ga0066651_103601562	3300006031	Soil	VYKAVVSLHGNPIVESAHLPDGRNAHIRVGMAEDPYIADRDTNTVVLEVRIGQAVVAVVDTVLDGRQVDEARHLATRVREGLSSGSLEPTVHSLEPLADA
Ga0066656_104915771	3300006034	Soil	VYKAVVSLHGNPIVESAHLPDGRNAHIRVGMAEDPYIADRDTNTVVLEVRIGHAVVAVVDTVLDARQVDEARHLATRVREGLSSGSLEPTVHSLEPLADAVL*
Ga0066656_110364142	3300006034	Soil	MSLHGHPVLEQVHLPDGRNASVRVGIAEDSYIPDRELNTVVLEVRVGHGVAAVIDTVLDAAQVDAARHLARRVRDGLSSGELEPSTSALERLADSVL*
Ga0066652_1014373832	3300006046	Soil	ACVSLHGNPIVENAHLPDGRNAQIHVGVAEDPYIADRDMNTVVLEVRIGRGVEAVIDTVLEPSQVTEARHLADRVREGLSSGELKPTTSSLERLADEIL*
Ga0079222_109776021	3300006755	Agricultural Soil	VSLHGNPIVEDAHLPDGRNARIRVGIAEDPYIADRDSTTVVLEIRIGHSVAAVIDTILEPDQTTEANHLVTRVREGLSSGELEPNVHSLERLADSIL*
Ga0079221_109531581	3300006804	Agricultural Soil	VSLHGNPIVEDAHLPDGRNARIRVGIAEDPYIADRDSTTVVLEIRIGHSVAAVIDTILEPDQTTEANHLVTRVREGLSSGELEPNVHSLERLADS
Ga0075433_102312322	3300006852	Populus Rhizosphere	MSLHGNPIVETAHLPDGRNARIRVAIAEDSYVADRDLNTVVLEVRVGHGVAAVIDTVLDADQVDAARHLATRVRDGLSSGELEPTTHALERLADSVL*
Ga0075425_1011528321	3300006854	Populus Rhizosphere	MSLHGNPIFESAHLPDGRNARIRVGIAEDSYIPDSESSTVVLEVHIGNAVTAVIDTILDPAQVDAARHLATRVRDGLTSGELEPTTHSLERLADAIL*
Ga0075425_1025547322	3300006854	Populus Rhizosphere	VTLHGNPIVESAHLPDGRNAHIRVGIAEDPYIADRDSNTVVLEVRIGHAVVAVLDTVLDAQQVDEARHLANRVREGLSSGSLEPTAHSLEPLADAVL*
Ga0075434_1025034332	3300006871	Populus Rhizosphere	VSLHGNPIIETARLPDGRQARIRVGIAEDSYIADRDSNTVVLEVRIGPGVAAVLDTVLDPDQVSEARHLAARVHEGLSSGTLQPTASSLEPLTDEFL*
Ga0075434_1025087282	3300006871	Populus Rhizosphere	MSLHGNPIVETAHLPDGRNARVRVGIAEDSYVADRDLNTVVLEVRVGHGVAAVIDTVLDADQVDAARHLATRVRDGLSSGELEPTTHALERLADSVL*
Ga0075434_1025693152	3300006871	Populus Rhizosphere	VSLHGNPIIETAHLPDGRNAHIRVGIAEDSYVADRDLNTVVLEVRIGQAVAAVIDTVLDAKQEDEARHLANRVREGLSSGTLEPTVHSLEPLADAVL*
Ga0066709_1010610612	3300009137	Grasslands Soil	VSLHGNPVIETVHLPDGRNASIRVGIAEDSYVPDRELNTVVLEVRVGHGVAAVIDTVLDAAQVDAARHLASRVRDGLSSGELEPSTSALERLADSVL*
Ga0114129_114259772	3300009147	Populus Rhizosphere	PDGRNARIRVAIAEDSYVADRDLNTVVLEVRVGHGVAAVIDTVLDADQVDAARHLATRVRDGLSSGELEPTTHALERLADSVL*
Ga0075423_100564512	3300009162	Populus Rhizosphere	MSLHGNPIVETAHLPDGRNARIRVGIAEDSYVADRDLNTVVLEVRVGHGVAAVIDTVLDADQVDAARHLATRVRDGLSSGELEPTTHALERLADSVL*
Ga0126382_116399852	3300010047	Tropical Forest Soil	ARIRVGIAQDSYIADRDSNTVVLEVRIGHAVVAVIDTVLDAAQVDEARHLANRVRDGLSSGSLEPTVHALEPLADAVL*
Ga0126377_117371621	3300010362	Tropical Forest Soil	VSLHGNPILETAHLPDGRNARIRVGIAEDPYIADRDLNTVVLEVRIGHAVAAVIDTVLDAQQEDEARHLANRVREGLSSGSLEPTVHSLEPLADAVL*
Ga0126379_130165871	3300010366	Tropical Forest Soil	VSLHGNPIFESAHLPDGRNAHIRVGIAEDPYIADRDSNTVVLEVRIGNAVAAVVDTVLDASQVDEARHLANRVREGLSSGSLEPTVHSLEPLADAVL*
Ga0134128_130272131	3300010373	Terrestrial Soil	VSLHGNPIFEEAHLPDGRNTRIRVGVAEDPYIADRESTTVVLEVRIGHSVVAVIDTILDPDQTEAAHHLATRVKEGLSSGDLEPTVRSLERLADEIL*
Ga0136449_1023208392	3300010379	Peatlands Soil	VSLHGNPIVETARLPDGREARIRVGVAEDPYVSDSDMRTVVLELRLGRGVAAVLDTILDPSQVSEARHLAERVREGLTSGVLEPTAHSLEPLTDRIL*
Ga0137364_110256382	3300012198	Vadose Zone Soil	VYKAVVSLHGNPIIETAHLPDGRNAHIRVGMAEDAYIADRDTNTVVLEVRIGQAVLAVVDTVLDARQVDEARHLATRVREGLSSGSLEPTVHALEPLADAVL*
Ga0137376_109295082	3300012208	Vadose Zone Soil	MSLHGNPVVETAHLPDGRNAHIRVGIAEDSYIPDSELNTVVLEVRVGHGVAAVIDTVLDAAQVDAAQHLASRVRDGLASGELEPTTSALERLADSVL*
Ga0150985_1204127611	3300012212	Avena Fatua Rhizosphere	GNPIVESAHLPDGRNAHIRVGMAEDPYIADRDTNTVVLEVRIGQAVVAVVDTVLDARQVDEARHLATRVREGLSSGSLEPTVHSLEPLADAVL*
Ga0164298_113241171	3300012955	Soil	LHGNPINETAQLPDGRHAHIRVGIAEDSYIADRDLNTVVLEVRIGNGVVAALDTILGAEQVSEAQHLADRVRDGLHEGSLEPTAHSLGPLTDELL*
Ga0164308_106224502	3300012985	Soil	SCKTPVVSLHGNPINETAQLPDGRHAHIRVGIAEDSYIADRDLNTVVLEVRIGNGVVAALDTILGAEQVSEAQHLADRVRDGLHEGSLEPTAHSLGPLTDELL*
Ga0157370_116584512	3300013104	Corn Rhizosphere	VTLHGNPVVETVQLPDGRNASIRVGVAEDSYVADRDLTTVTLDVRIGRSVVAVIDTILDPSQFTEARHLVARIREGLASGELEPATSSLERLADQIL*
Ga0181534_105604311	3300014168	Bog	VSLHGNPIVETARLPDGREARIRVGVAEDAYIADAEMNTVVLELRIGRGVAAVLDTILNPSQVSEARHLAERVRDGLVSGELEPTAHS
Ga0181519_102914922	3300014658	Bog	VSLHGNPIVETARLPDGREARIRVGVAEDAYIADAEMNTVVLELRIGRGVAAVLDTILNPSQVSEARHLAERVRDGLVSGELEPTAHSLGPLTDELL*
Ga0132258_109598662	3300015371	Arabidopsis Rhizosphere	VSLHGNPIIETAHLPDGRNAHIRVGIAEDSYVADRDLNTVVLEVRIGHAVAAVIDTVLDAEQEDEARHLANRVREGLSSGTLEPTVHSLEPLADAVL*
Ga0132258_112508131	3300015371	Arabidopsis Rhizosphere	PLIDTTGLPDGREATIRVGIAEDSYVAERELNTVVLEVRVEHVVAAVIDTILGASHVSEARHLVARVRDGLSSGDLQPTAASLEPLADTLP*
Ga0132258_117923461	3300015371	Arabidopsis Rhizosphere	VSLHGNPVIETAHLPDGRQAHIRVGIAEDSYVADSDLNTVVLEVRIGHGVVAVVDTILRADQVTEARHLANRVRDGLSDGSLAPTSHALGPLADEYP*
Ga0132258_126751763	3300015371	Arabidopsis Rhizosphere	VSLHGNPIHETARLPDGGEVTIRVGIAEDSYIADKDLNTVVLEVRVGRSVVATLDTILGAEQVEEARHLANRVREGLSSGELEPTAHSLGPLTDELL*
Ga0132256_1025457271	3300015372	Arabidopsis Rhizosphere	VSLHGNPIHEKARLPDGGEVTIRVGIAEDSYIADKDLNTVVLEVRVGRSVVATLDTILGAEQVDEARHLANRVREGLSSGELEPTALSLGPLTDELL*
Ga0132257_1033463551	3300015373	Arabidopsis Rhizosphere	VRLHGNPVIETAHLPDGRQAHIRVGIAEDSYVADSDLNTVVLEVRIGHGVVAVVDTILRADQVTEARHLANRVRDGLSDGSLAPTSHALGPLADEYL*
Ga0182035_102882782	3300016341	Soil	VSLHGNPVHEKARLPNGGEVAIRVGIAEDPYIADKDLNTVVLEVRVGRSVVATLDTILDAEQVDEARHLAERVREGLSSGELEPTAHSLGP
Ga0187776_108090721	3300017966	Tropical Peatland	MSLHGNPILESGHLPDGRPFRIRVGVAEDPYIADSELSTVVLEVKVGGHVAAVMDTILSPDQESQALHLAERVRDGLAAGELEPTVHSLGPLTDEFL
Ga0187777_103669002	3300017974	Tropical Peatland	VSLHGNPILETAHLPDGRQARIRVGVAEDPYIADRDLSTVVLEVRIGGGVVAVLDTILDPAQVSEARHLAERVRQGLSTGELPPTAHALGPLTDELL
Ga0066667_121528601	3300018433	Grasslands Soil	MSLHGNPVVETAHLPDGRNAHIRVGIAEDSYIPDSELNTVVLEVRVGHGVAAVIDTVLDAAQVDAARHLASRVRDGLSSGELEPSTSALERLADSVL
Ga0206353_109842123	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MSLHGNPVVEQAQLPDGREATIRVGIFEDPYVADKLLNTVTLEVSVGGELVAGMDTVLDAGQVDEARRLAARVREGLAGGELEPTVHSLEPLADSIL
Ga0210384_105893942	3300021432	Soil	VSLHGNPIVETARLPDGREARIRVGVAEDSYIADRDMHTVVLEVRIGRGVVAVHDTILDPGQVEEARHLAARVHEGLSSGELKPTASSLGPLTDELL
Ga0207688_109486151	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VSLHGNPITDTARLPDGRVAEIRVGIAEDPYIADRDLDTVVLEVRVGHEVEAVIDTILGGSHVTEAEHLVTRVRDGLASGELQPTAASLEPLADSLL
Ga0207663_104646472	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VSLHGNPVHEKAHLPGGGEVTIRVGLAEDPYIADKDMNTVVLEVRIGRSVVAVLDTILDAEQVTEARHLAERVRDGLSAGELEPTAHSLGPLTDELL
Ga0207646_115900992	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VSLHGNPIIETADLPDGRQAHIRVGIAEDSYVADRELDTVVLEVRIEHDVVAVLDTILNGDQVTEAQHLATRVRDGLSDGSLAPTSHSLGPLTDEFL
Ga0207664_101200041	3300025929	Agricultural Soil	NAMSLHGNPIVEHAHLPDGRNARIRIGIAEDSYVADRDLNTVTLDIRIGNNVAAVMDTVLDAEQVDEARHLAQRVREGLSSGELQPTTHSLEPFADEIL
Ga0209006_104848912	3300027908	Forest Soil	VSLHGNPILETARLPDGREARIRVGVAEDPYIADRDMNTVVLELRLGRGVAAVLDTILDPAQVSEARHLAERVREGLISGDLQPTAHSLGPLTDEIL
Ga0265338_107980851	3300028800	Rhizosphere	GCRRRKLSRSCRTQPMSLHGNPIVESAHLPDGRQARIRVGIAEDSYIADSELNTVVLEVRIGNGVAAVLDTILDAEQVSEARHLANRVREGLSDGSLEPTAHSLGPLTDELL
Ga0311339_113877192	3300029999	Palsa	MSLHGNPIVETARLPDGREAKIRVGVAEDPYIADRDMTTVVLEVRLGRGVAAVLDTILDPAQVSEARHLAERVREGLISGALEPTAHSLGPLTDEIL
Ga0073998_116902591	3300031023	Soil	ILETARLPDGREARIRVGVAEDPYIADRDMNTVVLEVRLGRGVAAVLDTILGAAQVSEARHLAERVREGLASGALEPTAHSLGPLTDELL
Ga0302325_100780445	3300031234	Palsa	MSLHGNPIVETARLPDGREARIRVGVAEDPYIADRDMNTVVLELRIGRGVAAVLDTILDPAQVSEARHLAERVREGLRSGALQPTAHSLGPLTDELL
Ga0302324_1015362572	3300031236	Palsa	KEVMSLHGNPIVETARLPDGREARIRVGVAEDPYIADRDMNTVVLELRIGRGVAAVLDTILDPAQVSEARHLAERVREGLRSGALQPTAHSLGPLTDELL
Ga0318534_107810701	3300031544	Soil	VSLHGNPVHAKARLPNGGEVAIRVGIAEDSYIADKDMNTVVLEVRVGRSVVATLDTILDAEQVDEARHLAERVREGLSSGELEPTAHSLGPLTDELL
Ga0318573_103308271	3300031564	Soil	VSLHGNPVHEKAHLPNGGEVSIRVGIAEDPYIADKDLNTVVLEVRVGRSVVATLDTILDADQVDEARQLAERVRDGLGSGELEPTAHSLGPLTDELL
Ga0307374_101302044	3300031670	Soil	PPSFAASWPRPRPLCVVYKGRVSLHGNPILETARLPDGREARIRVGMAEDPYIADRDMNTVVLEIKLGRGVAAVLNTILDPLQVTEARHLAARVREGLNSGELTPTASSLEPLTDEIL
Ga0318574_106561921	3300031680	Soil	VSLHGNPVHEKAHLPNGGEVSIRVGIAEDPYIADKDLNTVVLEVRVGRSVVATLDTILDADQVDEARHLAERVRDGLGSGELEPTAHSLGPLTDELL
Ga0310686_1076264621	3300031708	Soil	MSLHGNPIVELARLPDGREAKIRVGLAEDPYIAERDENTVVLEVRIGSGVVAVLDTILGADQVEQAQHLVKRVREGLSSGELKPTASALGPLTDEFL
Ga0318493_102469122	3300031723	Soil	VSLHGNPIVETAHLPDGRHARIRVGVAEDPYIADRDLSTVVLEVRIGNGVVAVLDTILDPAQVAEARHLADRVREGLGSGELEPTAHSLGPLTDELL
Ga0318502_109543091	3300031747	Soil	VSLHGNPVHEKAHLPNGGEVSIRVGIAEDPYIADKDLNTVVLEVRVGRSVVATLDTILDADQVDEARHLAERVRDGLGTGELEPTAHSLGPLTDELL
Ga0318554_108549531	3300031765	Soil	PNGGEVSIRVGIAEDPYIADKDLNTVVLEVRVGRSVVATLDTILDADQVDEARHLAERVRDGLGSGELEPTAHSLGPLTDELL
Ga0318547_107730581	3300031781	Soil	VSLHGNPVHEKARLPNGGEVAIRVGIAEDPYIADKDLNTVVLEVRVGRSVVATLDTILDADQVDEARHLAERVRDGLGSGELEPTAHSLGPLTDELL
Ga0318564_105258151	3300031831	Soil	VSLHGNPVHETARLPNGGEVAIRVGLAEDSYIADKDMNTVVLEVRVGRSVVATLDTILDADQVDEARHLAERVRDGLGTGELEPTAHSLGPLTDELL
Ga0318512_106935801	3300031846	Soil	HLPDGRHARIRVGVAEDPYIADRDLSTVVLEVRIGNGVVAVLDTILDPAQVAEARHLADRVREGLGSGELEPTAHSLGPLTDELL
Ga0318551_101051023	3300031896	Soil	VSLHGNPIVETAHLPDGRHARIRVGVAEDSYIADRDLNTVVLEVRIGSGVVAVLDTILDAAQVAEARHLADRVREGLASGALEPTAHSLGPLTDELL
Ga0308175_1019181321	3300031938	Soil	NPVVETVQLPDGRNASIRVGVAEDSYVADRDLTTVTLDVRIGRSVVAVIDTILDPSQFTEARHLVARIREGLASGELEPATSSLERLADQIL
Ga0318505_105074502	3300032060	Soil	VSLHGNPVHAKARLPNGGEVAIRVGIAEDSYIADKDMNTVVLEVRVGRSVVATLDTILDAEQVDEARHLAERVRDGLSSGELEPTAHSLGPLTDELL
Ga0318510_100847892	3300032064	Soil	VETAHLPDGRHARIRVGVAEDSYIADRDLNTVVLEVRIGSGVVAVLDTILDAAQVAEARHLADRVREGLASGALEPTAHSLGPLTDELL
Ga0318510_102570162	3300032064	Soil	VSLHGNPVHEKARLPNGGEVAIRVGIAEDPYIADKDLNTVVLEVRVGRSVVATLDTILDADQVDEARHLAERVREGLSSGELEPTAHSLG
Ga0318514_106661721	3300032066	Soil	VSLHGNPVHETARLPNGGEVAIRVGLAEDSYIADKDMNTVVLEVRVGRSVLATLDTILDAEQVDEAHHLATRVRDGLSSGELEPTAHSLGPLTDELL
Ga0318525_103281311	3300032089	Soil	VHETAHLPNGGEVSIRVGIAEDPYIADKDLNTVVLEVRVGRSVVATLDTILDADQVDEARHLAERVRDGLGSGELEPTAHSLGPLTDELL
Ga0306920_1023468441	3300032261	Soil	VHETARLPNGGEVKIRVGIAEDSYIADKDLNTVVLEVRVGRSVVATLDTILDAEQVDEARHLAERVREGLSSGELEPTAHSLGPLTDELL
Ga0306920_1025389042	3300032261	Soil	VSLHGNPVHAKARLPNGGEVAIRVGIAEDSYIADKDMNTVVLEVRVGRSVVATLDTILDAEQVDEARHLAERVREGLSSGELEPTAHSLGPL
Ga0335085_102169492	3300032770	Soil	MSLHGSPIIEHVRLPDGRQARIRVGVAEDSYIADSEMSTVVLEVRIGSGVAAVLDTILDPEQEKAAQHLADRVRDGLSSGELEPTAHSLGPLTDEIL
Ga0335085_112754172	3300032770	Soil	MSLHGSPIIEEAHLPDGRQAQIRVGIAQDSYIDERDMDTVVLEVRIGRGVVAVMDTILGSAQVSEARHLANRVREGLTCGTLEPSAASLGPLTDQLL
Ga0335082_108773941	3300032782	Soil	VSLHGNPIHETARLPDGREVSIRVGIAEDSYIADRDLNTVVLEVRAGRGVLAVLDTILGAEQVDEARHLAERVREGLGSGELEPTAHSLGPLTDELL
Ga0335079_100655002	3300032783	Soil	MSLHGSPIIEHVRLPDGRQARIRVGVAEDSYIADSEMSTVVLEVRIGGGVAAVLDTILDPEQEKAAQHLADRVRDGLSSGELEPTAHSLGPLTDEIL
Ga0335078_103918731	3300032805	Soil	GRETVIRVGIPEDSYIADRDLNTVVLELRSGRAVLAVVTTILNADQESAARRLADRVAEGLRSGELEPHASALGPLADEIL
Ga0335081_104713232	3300032892	Soil	VSNNDVVSLHAHPIHETVRLPDGRETVIRVGIPEDSYIADRDLNTVVLELRSGRAVLAVVTTILNADQESEARRLADRVAEGLRSGELEPHASALEPLADEIL
Ga0335081_118509601	3300032892	Soil	GSPIIEEAHLPDGRQAQIRVGIAQDSYIDERDMDTVVLEVRIGRGVVAVMDTVLGSAQVSEARHLANRVREGLTCGTLEPSAASLGPLTDQLL
Ga0335069_117958682	3300032893	Soil	MSLHGSPIIEEAHLPDGRQAQIRVGIAQDSYIDERDMDAVVLEVRSGRGVVAVMDTILGSAQVSEARHLANRVREGLTCSTLEPSAASLGPLTDQLL
Ga0335071_103467093	3300032897	Soil	MSLHGSPVVETAKLPDGRHAHIRVGVAEDSYIPESELRTVVLEVRVGGGVAAVLDTILDPEQVSEARHLAERVRDGLASGELAPTAHALGPLTDEFL
Ga0335071_111597712	3300032897	Soil	VSLHGNPIHETARLPDGREVSIRVGIAEDSYIADRDLNTVVLEVRAGRGVLAVLDTILGAEQVDEARHLADRVREGLGSGELEPTAHSLGPLTDELL
Ga0335071_112528062	3300032897	Soil	MSLHGSPIIEEAHLPDGRQAQIRVGIAQDSYIDERDMDTVVLEVRIGRGVVAVMDTILGSAQVSEARHLANRVREGLTGGTLEPSAASLGPLTDQLL
Ga0335072_106500351	3300032898	Soil	VSLHGNPIVETARLPDGREARIRVGIAEDPYIADRDLSTVVLELRIGHGVVAVLDTILDPDQVDEARHLVRRVHEGLSSGELQPTAHSLGPLTDEFL
Ga0335077_104251123	3300033158	Soil	VSNNDVVSLHAHPIHETVRLPDGRETVIRVGIPEDSYIADRDLNTVVLELRSGRAVLAVVTTILNADQESAARRLADRVAEGLRSGELEPHASALGPLADEIL
Ga0335077_121965332	3300033158	Soil	LHGSPIIEHVRLPDGRQARIRVGVAEDSYIADSEMSTVVLEVRIGSGIAAVLDTILDPEQEKAARHLADRVRDGLSSGELEPTAHSLGPLTDEIL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063574

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences