Metagenome / Metatranscriptome Family F063564

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063564
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	74 residues
Representative Sequence	RTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHALEGPGTTKHSQN
Number of Associated Samples	94
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	83.72 %
% of genes from short scaffolds (< 2000 bps)	65.12 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (77.519 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (37.209 % of family members)
Environment Ontology (ENVO)	Unclassified (63.566 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.217 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.28% β-sheet: 0.00% Coil/Unstructured: 34.72%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF07678	TED_complement	34.88
PF00801	PKD	10.08
PF13249	SQHop_cyclase_N	6.20
PF14478	DUF4430	5.43
PF12706	Lactamase_B_2	2.33
PF02538	Hydantoinase_B	2.33
PF01545	Cation_efflux	1.55
PF16916	ZT_dimer	0.78
PF08818	DUF1801	0.78
PF00733	Asn_synthase	0.78
PF13714	PEP_mutase	0.78
PF12681	Glyoxalase_2	0.78
PF00432	Prenyltrans	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	4.65
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	1.55
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	1.55
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	1.55
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.78
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.78

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.84 %
Unclassified	root	N/A	20.16 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.52 %
Unclassified	root	N/A	20.16 %
Viruses	superkingdom	All Organisms → Viruses	2.33 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	77.52 %
Unclassified	root	N/A	20.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.16 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	13.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.16 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	13.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.16 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	13.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.16 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	13.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.33 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10212315	All Organisms → cellular organisms → Archaea	517	Open in IMG/M
3300002560\|JGI25383J37093_10210897	All Organisms → cellular organisms → Archaea	510	Open in IMG/M
3300002908\|JGI25382J43887_10498740	All Organisms → cellular organisms → Archaea	515	Open in IMG/M
3300002909\|JGI25388J43891_1002856	All Organisms → cellular organisms → Archaea	3570	Open in IMG/M
3300002909\|JGI25388J43891_1015228	All Organisms → Viruses → Predicted Viral	1394	Open in IMG/M
3300002912\|JGI25386J43895_10035018	All Organisms → cellular organisms → Archaea	1473	Open in IMG/M
3300005166\|Ga0066674_10036370	All Organisms → cellular organisms → Archaea	2192	Open in IMG/M
3300005166\|Ga0066674_10040213	All Organisms → cellular organisms → Archaea	2088	Open in IMG/M
3300005166\|Ga0066674_10378747	All Organisms → cellular organisms → Archaea	660	Open in IMG/M
3300005176\|Ga0066679_10200909	All Organisms → cellular organisms → Archaea	1270	Open in IMG/M
3300005178\|Ga0066688_10376816	All Organisms → cellular organisms → Archaea	919	Open in IMG/M
3300005180\|Ga0066685_10461547	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	881	Open in IMG/M
3300005186\|Ga0066676_10327130	All Organisms → Viruses → Predicted Viral	1020	Open in IMG/M
3300005446\|Ga0066686_10134710	All Organisms → cellular organisms → Archaea	1622	Open in IMG/M
3300005558\|Ga0066698_10071141	All Organisms → cellular organisms → Archaea	2244	Open in IMG/M
3300005558\|Ga0066698_10535419	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	796	Open in IMG/M
3300005568\|Ga0066703_10558899	All Organisms → cellular organisms → Archaea	671	Open in IMG/M
3300005586\|Ga0066691_10457686	All Organisms → cellular organisms → Archaea	762	Open in IMG/M
3300006791\|Ga0066653_10021374	All Organisms → cellular organisms → Archaea	2432	Open in IMG/M
3300006794\|Ga0066658_10078572	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1500	Open in IMG/M
3300006796\|Ga0066665_10047868	All Organisms → cellular organisms → Archaea	2927	Open in IMG/M
3300006800\|Ga0066660_10251787	All Organisms → cellular organisms → Archaea	1382	Open in IMG/M
3300006800\|Ga0066660_11032302	All Organisms → cellular organisms → Archaea	658	Open in IMG/M
3300007255\|Ga0099791_10007794	All Organisms → cellular organisms → Archaea	4431	Open in IMG/M
3300007265\|Ga0099794_10181194	All Organisms → cellular organisms → Archaea	1075	Open in IMG/M
3300007265\|Ga0099794_10620850	All Organisms → cellular organisms → Archaea	573	Open in IMG/M
3300009089\|Ga0099828_10073517	All Organisms → cellular organisms → Archaea	2901	Open in IMG/M
3300009090\|Ga0099827_11771868	Not Available	538	Open in IMG/M
3300009137\|Ga0066709_102445737	All Organisms → cellular organisms → Archaea	707	Open in IMG/M
3300010304\|Ga0134088_10352389	All Organisms → cellular organisms → Archaea	714	Open in IMG/M
3300010322\|Ga0134084_10050660	Not Available	1222	Open in IMG/M
3300010323\|Ga0134086_10118933	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	946	Open in IMG/M
3300010335\|Ga0134063_10007577	All Organisms → cellular organisms → Archaea	4144	Open in IMG/M
3300010336\|Ga0134071_10072429	All Organisms → cellular organisms → Archaea	1601	Open in IMG/M
3300011269\|Ga0137392_10308192	All Organisms → cellular organisms → Archaea	1309	Open in IMG/M
3300011270\|Ga0137391_11127960	All Organisms → cellular organisms → Archaea	632	Open in IMG/M
3300011271\|Ga0137393_10369526	All Organisms → cellular organisms → Archaea	1226	Open in IMG/M
3300012096\|Ga0137389_10184714	All Organisms → cellular organisms → Archaea	1728	Open in IMG/M
3300012198\|Ga0137364_10099642	All Organisms → cellular organisms → Archaea	2043	Open in IMG/M
3300012200\|Ga0137382_10030815	All Organisms → cellular organisms → Archaea	3202	Open in IMG/M
3300012200\|Ga0137382_10553407	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	820	Open in IMG/M
3300012201\|Ga0137365_10083690	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2403	Open in IMG/M
3300012201\|Ga0137365_10149043	All Organisms → cellular organisms → Archaea	1757	Open in IMG/M
3300012202\|Ga0137363_10117555	All Organisms → cellular organisms → Archaea	2046	Open in IMG/M
3300012206\|Ga0137380_11752260	All Organisms → cellular organisms → Archaea	505	Open in IMG/M
3300012207\|Ga0137381_10202030	All Organisms → cellular organisms → Archaea	1722	Open in IMG/M
3300012211\|Ga0137377_10285500	All Organisms → cellular organisms → Archaea	1583	Open in IMG/M
3300012211\|Ga0137377_11545671	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	589	Open in IMG/M
3300012356\|Ga0137371_10087437	All Organisms → cellular organisms → Archaea	2421	Open in IMG/M
3300012356\|Ga0137371_10648098	Not Available	809	Open in IMG/M
3300012361\|Ga0137360_11128671	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	677	Open in IMG/M
3300012361\|Ga0137360_11887984	All Organisms → cellular organisms → Archaea	503	Open in IMG/M
3300012362\|Ga0137361_10203940	All Organisms → cellular organisms → Archaea	1789	Open in IMG/M
3300012405\|Ga0134041_1154499	All Organisms → cellular organisms → Archaea	607	Open in IMG/M
3300012918\|Ga0137396_10794981	All Organisms → cellular organisms → Archaea	696	Open in IMG/M
3300012918\|Ga0137396_11070881	All Organisms → cellular organisms → Archaea	579	Open in IMG/M
3300012927\|Ga0137416_11244565	All Organisms → cellular organisms → Archaea	671	Open in IMG/M
3300012972\|Ga0134077_10302360	All Organisms → cellular organisms → Archaea	672	Open in IMG/M
3300012972\|Ga0134077_10478469	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	549	Open in IMG/M
3300014150\|Ga0134081_10057396	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1171	Open in IMG/M
3300015245\|Ga0137409_10798998	All Organisms → cellular organisms → Archaea	778	Open in IMG/M
3300015358\|Ga0134089_10430796	All Organisms → cellular organisms → Archaea	568	Open in IMG/M
3300017657\|Ga0134074_1300370	All Organisms → cellular organisms → Archaea	585	Open in IMG/M
3300017659\|Ga0134083_10429681	All Organisms → cellular organisms → Archaea	581	Open in IMG/M
3300018433\|Ga0066667_10056846	Not Available	2395	Open in IMG/M
3300018433\|Ga0066667_10078869	All Organisms → cellular organisms → Archaea	2114	Open in IMG/M
3300018433\|Ga0066667_10114319	All Organisms → cellular organisms → Archaea	1829	Open in IMG/M
3300018433\|Ga0066667_10199467	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1469	Open in IMG/M
3300018433\|Ga0066667_11965672	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	536	Open in IMG/M
3300021171\|Ga0210405_11431286	All Organisms → cellular organisms → Archaea	502	Open in IMG/M
3300024330\|Ga0137417_1119237	All Organisms → cellular organisms → Archaea	975	Open in IMG/M
3300026296\|Ga0209235_1043669	All Organisms → cellular organisms → Archaea	2209	Open in IMG/M
3300026296\|Ga0209235_1080621	All Organisms → cellular organisms → Archaea	1453	Open in IMG/M
3300026296\|Ga0209235_1177064	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	791	Open in IMG/M
3300026296\|Ga0209235_1228781	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	592	Open in IMG/M
3300026298\|Ga0209236_1089080	All Organisms → cellular organisms → Archaea	1412	Open in IMG/M
3300026300\|Ga0209027_1129362	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	874	Open in IMG/M
3300026301\|Ga0209238_1002213	All Organisms → cellular organisms → Archaea	7665	Open in IMG/M
3300026308\|Ga0209265_1131965	All Organisms → cellular organisms → Archaea	633	Open in IMG/M
3300026313\|Ga0209761_1096019	All Organisms → cellular organisms → Archaea	1494	Open in IMG/M
3300026324\|Ga0209470_1026329	All Organisms → cellular organisms → Archaea	3049	Open in IMG/M
3300026324\|Ga0209470_1139907	Not Available	1067	Open in IMG/M
3300026324\|Ga0209470_1154757	All Organisms → Viruses → Predicted Viral	1004	Open in IMG/M
3300026325\|Ga0209152_10038011	All Organisms → cellular organisms → Archaea	1663	Open in IMG/M
3300026327\|Ga0209266_1044072	All Organisms → cellular organisms → Archaea	2248	Open in IMG/M
3300026329\|Ga0209375_1148865	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	989	Open in IMG/M
3300026329\|Ga0209375_1152128	All Organisms → cellular organisms → Archaea	972	Open in IMG/M
3300026330\|Ga0209473_1067011	All Organisms → cellular organisms → Archaea	1533	Open in IMG/M
3300026332\|Ga0209803_1067567	All Organisms → cellular organisms → Archaea	1527	Open in IMG/M
3300026335\|Ga0209804_1227581	All Organisms → cellular organisms → Archaea	737	Open in IMG/M
3300026343\|Ga0209159_1023877	All Organisms → cellular organisms → Archaea	3384	Open in IMG/M
3300026343\|Ga0209159_1151187	All Organisms → cellular organisms → Archaea	907	Open in IMG/M
3300026371\|Ga0257179_1012610	All Organisms → cellular organisms → Archaea	905	Open in IMG/M
3300026499\|Ga0257181_1020723	All Organisms → cellular organisms → Archaea	976	Open in IMG/M
3300026523\|Ga0209808_1039996	All Organisms → cellular organisms → Archaea	2204	Open in IMG/M
3300026529\|Ga0209806_1060455	All Organisms → cellular organisms → Archaea	1741	Open in IMG/M
3300026529\|Ga0209806_1265322	All Organisms → cellular organisms → Archaea	577	Open in IMG/M
3300026536\|Ga0209058_1021428	All Organisms → cellular organisms → Archaea	4226	Open in IMG/M
3300026540\|Ga0209376_1114247	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1355	Open in IMG/M
3300026548\|Ga0209161_10113051	All Organisms → cellular organisms → Archaea	1619	Open in IMG/M
3300027643\|Ga0209076_1093107	All Organisms → cellular organisms → Archaea	856	Open in IMG/M
3300027748\|Ga0209689_1239422	All Organisms → cellular organisms → Archaea	758	Open in IMG/M
3300027842\|Ga0209580_10058697	All Organisms → cellular organisms → Archaea	1806	Open in IMG/M
3300028536\|Ga0137415_10109553	All Organisms → cellular organisms → Archaea	2610	Open in IMG/M
3300028536\|Ga0137415_11299532	All Organisms → cellular organisms → Archaea	545	Open in IMG/M
3300028673\|Ga0257175_1112359	All Organisms → cellular organisms → Archaea	539	Open in IMG/M
3300031720\|Ga0307469_10691549	All Organisms → cellular organisms → Archaea	923	Open in IMG/M
3300031820\|Ga0307473_10100811	All Organisms → cellular organisms → Archaea	1537	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	53.49%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	37.21%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	16.28%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_102123151	3300002558	Grasslands Soil	SYKAWTPLLAFFFQIVAIGILYAVTSGIAAPYFSADPWAFPLIFLLIALIPTIKAVTSIVHALEGTSTAKHSQN*
JGI25383J37093_102108971	3300002560	Grasslands Soil	QLANTVQDTYKNYKAWTPLLAFFFQIIAIGILYAVTAGIAQPYFGANPWAYPLIFLLIALIPTIKVVTSVVNALDGSTATKHSQN*
JGI25382J43887_104987401	3300002908	Grasslands Soil	RTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHALEGPGTTKHSQN*
JGI25388J43891_10028561	3300002909	Grasslands Soil	NYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHGLEGTGTTKHSQN*
JGI25388J43891_10152281	3300002909	Grasslands Soil	NYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQQWAYPLIFLLIALIPTIKVVVNMVHALEGTGTTKHSQN*
JGI25386J43895_100350181	3300002912	Grasslands Soil	LANTVQDAYKNYKAWTPLLAFFFQIVAIGILYAVTSGIAAPYFSADPWAFPLIFLLIALIPTIKAVTSIVHALEGTSTAKHSQN*
Ga0066674_100363701	3300005166	Soil	VSDTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQQWAYPLIFLLIALIPTIKVVVNMVHALEGTGTTKHSQN*
Ga0066674_100402133	3300005166	Soil	VSDTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHGLEGTGTTKHSQN*
Ga0066674_103787472	3300005166	Soil	LAYFFQIVAIGILYSVTSGIAQPYFTAQQWAFPLIFLLIALIPTIKVVVNMVHALEGPGSTKHSQN*
Ga0066679_102009092	3300005176	Soil	NTVQDTYKNYKAWTPLLAFFFQIIAIGILYAVTAGIAQPYFGATQWAYPLIFLLIALIPTIKVVTSIVNALDNTTSSKHSQN*
Ga0066690_101048962	3300005177	Soil	ILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINIVHALEGPSATKHSTNN*
Ga0066688_103768162	3300005178	Soil	PLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAFPLIFLLIALIPTIKVVVNMVHALEGTGSTKHSQN*
Ga0066685_104615471	3300005180	Soil	PLLAYFFQIVAIGILYSVTNGIAQPYFTAQQWAYPLIFLLIALIPTIKVVVNMVHALEGTGTTKHSQN*
Ga0066676_103271301	3300005186	Soil	QLADTVSDTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQQWAYPLIFLLIALIPTIKVVVNMVHALEGTGTTKHSQN*
Ga0066676_110587661	3300005186	Soil	GIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN*
Ga0066675_102662983	3300005187	Soil	FQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN*
Ga0066686_101347101	3300005446	Soil	LKFGTQLADTVSDTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHGLEGTGTTKHSQN*
Ga0066697_101073661	3300005540	Soil	IIAIGILYAVTAGIAQPYFGANPWAYPLIFLLIALIPTIKVVTSVVNALDGSTATKHSQN
Ga0066661_109228981	3300005554	Soil	IIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN*
Ga0066698_100711414	3300005558	Soil	DTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHGLEGTGTTKHSQN*
Ga0066698_105354191	3300005558	Soil	WAPLLAYFFQIVAIGILYSVTNGIAQPYFTAQQWAYPLIFLLIALIPTIKVVVNMVHALEGTGTAKHSQN*
Ga0066703_105588991	3300005568	Soil	TVSDTYKNYRTWTPLLAYFFQIVAIGILYSVTSGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHALEGPGTTKHSQN*
Ga0066691_104576862	3300005586	Soil	FFFQIVAIGILYAVTSGIATPYFGANQWAYPLIFLLIALIPTIKVVTSIVNALDNTTSSKHSQN*
Ga0066691_105481561	3300005586	Soil	IVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDNSSGTKHSTNN*
Ga0066653_100213744	3300006791	Soil	RTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQQCAYPLIFLLLALLPTIEVVVNMVHALEGTGTTKHSQN*
Ga0066658_100785722	3300006794	Soil	KNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHALEGTGPTKHSQN*
Ga0066658_102875461	3300006794	Soil	VILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHAIEGPSATKHSTNN*
Ga0066665_100478681	3300006796	Soil	TPLLAYFFQIVAIGILYSVTNGIAQPYFTAQQWAYPLIFLLIALIPTIKVVVNMVHALEGTGTTKHSQN*
Ga0066660_102517872	3300006800	Soil	DAYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHALEGTGPTKHSQN*
Ga0066660_110323022	3300006800	Soil	TPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAFPLIFLLIALIPTIKVVVNMVHALEGPGSTKHSQN*
Ga0099791_100077941	3300007255	Vadose Zone Soil	IFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPTAKHATNN*
Ga0099794_101811941	3300007265	Vadose Zone Soil	KAWTPLLAFFFQIIAIGILYAVTAGIAQPYFGANPWAYPLIFLLIALIPTIKVVTSIVNALDGTTPTKHSQN*
Ga0099794_106208501	3300007265	Vadose Zone Soil	TVQDAYKTYKAWTPLLAFFFQIVAIGILYAVTAGIAAPYFAADPWAFPLIFLLIALIPTIKAVTSIVHALEGTTTTKHSQSQN*
Ga0099828_100251895	3300009089	Vadose Zone Soil	AYIFQIIAIVILYSVSSGIATQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGASTTKHSTNN*
Ga0099828_100735171	3300009089	Vadose Zone Soil	FFFQIVAIGILYAVTAGIAAPYFSADPWAFPLIFLLIALVPTIKAVTSIVHALEGTAATKHTQN*
Ga0099827_117718682	3300009090	Vadose Zone Soil	FFQIVAIGILYAVTAGIAAPYFAADPWAFPLIFLLIALIPTIKAVTSIVHALEGTTTAKHSQN*
Ga0066709_1024457371	3300009137	Grasslands Soil	NYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN*
Ga0134088_103523891	3300010304	Grasslands Soil	FFFQIIAIGILYAVTAGIAQPYFGANPWAYPLIFLLIALIPTIKVVTSVVNALDGSTATKHSQN*
Ga0134084_100506601	3300010322	Grasslands Soil	YKSYRAWTPLLAYFFQIVAIGILYAVTNPIAQPYFTSQPWAFPLIFLLIALIPTLKVVVNIVHGLEGGSSSSSTKHAQSQNY*
Ga0134086_101189332	3300010323	Grasslands Soil	RTWTPLLAYFFQIVAIAILYAVTNPIAQPYFTSQPWAFPLIFLLIALIPTLKVVVNVVHGLEGGSSSSSTKHAQSQNY*
Ga0134063_100075774	3300010335	Grasslands Soil	LAYFFQIVAIAILYAVTNPIAQPYFTSQPWAFPLIFLLIALIPTLKVVVNIVHGLEGGSSSSSTKHAQSQNY*
Ga0134071_100724291	3300010336	Grasslands Soil	WTPLLAFFFQIIAIGILYAVTAGIAQPYFGANQWAYPLIFLLIALIPTIKVVTSIVNALDSTTSTKHNQN*
Ga0137392_103081921	3300011269	Vadose Zone Soil	LLAFFFQIVAIGILYAVTAGIAAPYFAADPWAFPLIFLLIALIPTIKAVTSIVHALEGTSATKHTQN*
Ga0137391_111279602	3300011270	Vadose Zone Soil	FGTQLADTVSDTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHALEGPGSTKHGQNYQN*
Ga0137393_103695261	3300011271	Vadose Zone Soil	YKAWTPLLAFFFQIVAIGILYAVTAGIAAPYFSADPWAFPLIFLLIALVPTIKAVTSIVHALEGTAATKHTQN*
Ga0137389_101847141	3300012096	Vadose Zone Soil	DTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFIAQPWAYPLIFLLIALIPTIKVVVNMVHALEGPGSTKHGQNSQN*
Ga0137364_100996421	3300012198	Vadose Zone Soil	TVSDTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHGLEGTGTTKHSQN*
Ga0137382_100308155	3300012200	Vadose Zone Soil	DTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHALEGTGTTKHSQN*
Ga0137382_105534072	3300012200	Vadose Zone Soil	DTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQQWAYPLIFLLIALIPTIKVVVNMVHALEGTGTTKHSQN*
Ga0137365_100836901	3300012201	Vadose Zone Soil	FFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHALEGTGTTKHSQN*
Ga0137365_101490431	3300012201	Vadose Zone Soil	TYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHGLEGTGTTKHSQN*
Ga0137363_101175551	3300012202	Vadose Zone Soil	IVAIGILYAVTAGIAAPYFGADPWAFPLIFLLIALVPTIKAVTSIVHALEGTSATKHSQA
Ga0137399_100547031	3300012203	Vadose Zone Soil	VILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGSSTTKHTTNN*
Ga0137380_107310791	3300012206	Vadose Zone Soil	LLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN*
Ga0137380_117522602	3300012206	Vadose Zone Soil	LAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHGLEGTGTTKHSQN*
Ga0137381_102020303	3300012207	Vadose Zone Soil	TYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQQCAYPLIFLLIALIPTIKVVVNMVHALEGTGTTKHSQN*
Ga0137378_100137517	3300012210	Vadose Zone Soil	ILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPATKHATNN*
Ga0137377_102855002	3300012211	Vadose Zone Soil	YKSYRTWTPLLAYFFQIVAIGILYAVTKDIAQPYFSAEPWAFPLMFLLIALIPTIKVVVNMVHALEGPGTTKKSQSQNY*
Ga0137377_115456712	3300012211	Vadose Zone Soil	SDTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHGLEGTGTTKHSQN*
Ga0137371_100874371	3300012356	Vadose Zone Soil	YFFQIVAIGILYSVTSGIAQPYFTAQQWAFPLIFLLIALIPTIKVVVNMVHALEGPGSTKHSQN*
Ga0137371_106480982	3300012356	Vadose Zone Soil	ANTVQDTYKNYKAWAPLLGFFFQIVAIGILYAVTSGIATPYFGANQWAYPLIFLLIALIPTIKVVTSIVNALDNTTSSKHSQN*
Ga0137360_111286712	3300012361	Vadose Zone Soil	ANTVQDAYKTYKAWTPLLAFFFQIVAIGILYAVTVGIAAPYFAADPWAFPLIFLLIALIPTIKAVTSIVHALEGTSTAKHSQN*
Ga0137360_118879841	3300012361	Vadose Zone Soil	KNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQQWAYPLIFLLIALIPTIKVVVNMVHALEGTGPTKHSQN*
Ga0137361_102039401	3300012362	Vadose Zone Soil	KNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQQWAYPLIFLLIALIPTIKVVVNMVHALEGTGTTKHSQN*
Ga0134041_11544992	3300012405	Grasslands Soil	IILKFGTQLADTVSDTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHGLEGTGTTKHSQN*
Ga0137397_110911331	3300012685	Vadose Zone Soil	LAYIFQIIAIVILYNVSSGIASPSFASAPWAYPLIFLLIALIPTLRVVVNIVHALEGSPTPKHSQNN*
Ga0137396_100440323	3300012918	Vadose Zone Soil	FQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHAIEGPSATKHSTNN*
Ga0137396_107949811	3300012918	Vadose Zone Soil	ANTVQDAYKSYKAWTPLLAFFFQIVAIGILYAVTAGIAAPYFAANPWAFPLIFLLIALVPTIKAVTGIVHALEGTSSTKHSQA*
Ga0137396_110708812	3300012918	Vadose Zone Soil	LLAFFFQIIAIGILYAVTAGIAQPYFGANPWAYPLIFLLIALIPTIKVVTSIVNALDGSTTTKHSQN*
Ga0137416_112445652	3300012927	Vadose Zone Soil	QDTYKNYKAWTPLLAFFFQIIAIGILYAVTAGIAQPYFGANPWAYPLIFLLIALIPTIKVVTSVVNALDGSTATKHSQN*
Ga0134077_103023602	3300012972	Grasslands Soil	FGTQLADTVSDTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHALEGTGTTKHSQN*
Ga0134077_104784691	3300012972	Grasslands Soil	SYRTWTPLLAYFFQIVAIGILYAVTKDIAQPYFSAEPWAFPLMFLLIALIPTIKVVVNMVHALEGPGTTKKSQSQNY*
Ga0134110_105129191	3300012975	Grasslands Soil	AIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN*
Ga0134081_100573962	3300014150	Grasslands Soil	ADTVSDTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAFPLIFLLIALIPTIKVVVNMVHALEGTGPTKHSQN*
Ga0137409_107989981	3300015245	Vadose Zone Soil	WTPLLAFFFQIIAIGILYAVTAGIAQPYFGANPWAYPLIFLLIALIPIIKVVTSIVNALDGSATTKHSQN*
Ga0134089_104307962	3300015358	Grasslands Soil	SDAYKSYCTWTPLLAYFFQIVAIAILYAVTNPIAQPYFTSQPWAFPLIFLLIALIPTLKVVVNVVHGLEGGSSSSSTKHAQSQNY*
Ga0134074_13003701	3300017657	Grasslands Soil	FGTQLADTVSDTYKNYRTWTPLLAYFFQIVAIGILYSVTSGIAQPYFTAQQWAFPLIFLLIALIPTIKVVVNMVHALEGPGTTKHSQN
Ga0134083_104296811	3300017659	Grasslands Soil	FFFQIIAIGILYAVTAGIAQPYFGANQWAYPLIFLLIALIPTIKVVTSIVNALDSTTSTKHNQN
Ga0066667_100568461	3300018433	Grasslands Soil	NYQAWVPLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINIVHALEGPSATKHSTNN
Ga0066667_100788691	3300018433	Grasslands Soil	KNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHALEGTGPTKHSQN
Ga0066667_101143193	3300018433	Grasslands Soil	DTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQQWAYPLIFLLIALIPTIKVVVNMVHALEGTGTTKHSQN
Ga0066667_101994672	3300018433	Grasslands Soil	LLAYFFQIVAIGILYAVTNPIAQPYFTSQPWAFPLIFLLIALIPTLKVVVNIVHGLEGGGGSSSSTKHAQSQNY
Ga0066667_119656722	3300018433	Grasslands Soil	LLAYFFQIVAIGILYAVTNPIAQPYFTSQPWAFPLIFLLIALIPTLKVVVNIVHGLEGGSSSSSTKHAQSQNY
Ga0215015_103142812	3300021046	Soil	MCIRDSIGILYAVTAGIAQPYFGANPWAFPLIFLLIALIPTIKAVTSIVHALEGTPATKHSQD
Ga0210405_114312862	3300021171	Soil	TQLANTVQDAYKSYKAWTPLLAFFFQIVAIGILYAVTAGIAQPYFGANPWAFPLIFLLIALIPTIKAVTSIVHALEGTPATKHSQD
Ga0137417_11192371	3300024330	Vadose Zone Soil	TYKNYKAWTPLLAFFFQIIAIGILYAVTAGIAQPYFGANPWAYPLIFLLIALIPTIKVVTSVVNALDGSTATKHSQN
Ga0209235_10436691	3300026296	Grasslands Soil	FGTQLADTVSDTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHGLEGTGTTKHSQN
Ga0209235_10806212	3300026296	Grasslands Soil	TQLANTVQDTYKNYKAWTPLLAFFFQIIAIGILYAVTAGIAQPYFGANPWAYPLIFLLIALIPTIKVVTSVVNALDGSTATKHSQN
Ga0209235_11770642	3300026296	Grasslands Soil	FGTQLADTVSDTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHALEGPGTTKHSQN
Ga0209235_12287812	3300026296	Grasslands Soil	AYKNYKAWTPLLAFFFQIVAIGILYAVTSGIAAPYFAADPWAFPLIFLLIALIPTIKAVTSIVHALEGTSTAKHSQN
Ga0209236_10890802	3300026298	Grasslands Soil	YKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHALEGTGPTKHSQN
Ga0209027_11293621	3300026300	Grasslands Soil	QLADTVSDTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIAMIPTIKVVVNMVHALEGTGTTKHSQN
Ga0209238_10022131	3300026301	Grasslands Soil	PLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAFPLIFLLIALIPTIKVVVNMVHALEGTGPTKHSQN
Ga0209265_11319651	3300026308	Soil	LANAASDAYKSYRAWTPLLAYFFQIVAIAILYAVTNPIAQPYFTSQPWAFPLIFLLIALIPTLKVVVNIVHGLEGGSSSSSTKHAQSQNY
Ga0209761_10960192	3300026313	Grasslands Soil	AYKNYRAWTPLLAYFFQIVAIGILYSVTNGIAQPYFAAQPWAYPLIFLLIALIPTIKVVVNMVHALEGNATTKHSQN
Ga0209761_12156941	3300026313	Grasslands Soil	ILYSVSNGIATQYFTSAPWAYPLIFLLIALLPTLRVVINLVHALEGPSASKHSTNN
Ga0209154_10859091	3300026317	Soil	NGIASQYFTSAPWAYPLIFLLIALIPTLRVVVNLVHALEGPSASKHSTNN
Ga0209470_10263291	3300026324	Soil	LAYFFQIVAIGILYAVTKDIAQPYFSAEPWAFPLMFLLIALIPTIKVVVNMVHALEGPGTTKKSQSQNY
Ga0209470_11399071	3300026324	Soil	PLLAYFFQIVAIGILYAVTNPIAQPYFTSQPWAFPLIFLLIALIPTLKVVVNIVHGLEGGSSSSSTKHAQSQNY
Ga0209470_11547571	3300026324	Soil	SDTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQQWAYPLIFLLIALIPTIKVVVNMVHALEGTGTTKHSQN
Ga0209470_13637251	3300026324	Soil	IFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN
Ga0209152_100380112	3300026325	Soil	DTVSDAYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAFPLIFLLIALIPTIKVVVNMVHALEGTGPTKHSQN
Ga0209152_101076921	3300026325	Soil	VILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHAIEGPSATKHSTNN
Ga0209266_10440724	3300026327	Soil	TYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHGLEGTGTTKHSQN
Ga0209375_11488652	3300026329	Soil	DAYKSYRTWTPLLAYFFQIVAIGILYAVTKDIAQPYFSAEPWAFPLMFLLIALIPTIKVVVNMVHALEGPGTTKKSQSQNY
Ga0209375_11521281	3300026329	Soil	DTVSDTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQQWAYPLIFLLIALIPTIKVVVNMVHALEGTGTTKHSQN
Ga0209473_10670111	3300026330	Soil	QLADTVSDAYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAFPLIFLLIALIPTIKVVVNMVHALEGTGPTKHSQN
Ga0209803_10675671	3300026332	Soil	LADTVSDTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHALEGTGTTKHSQN
Ga0209804_12275812	3300026335	Soil	WTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAFPLIFLLIALIPTIKVVVNMVHALEGPGSTKHSQN
Ga0209159_10238771	3300026343	Soil	QLADTVSDTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHGLEGTGTTKHSQN
Ga0209159_11511872	3300026343	Soil	QIVAIGILYSVTNGIAQPYFTAQQWAYPLIFLLIALIPTIKVVVNMVHALEGTGTTKHSQ
Ga0257179_10126102	3300026371	Soil	TQLANTVQDTYKNYKAWTPLLAFFFQIIAIGILYAVTAGIAQPYFGANPWAYPLIFLLIALIPTIKVVTSVVNALDGTTSTKHSQN
Ga0257181_10207232	3300026499	Soil	YKAWTPLLAFFFQIIAIGILYAVTAGIAQPYFGANPWAYPLIFLLIALIPTIKVVTSVVNALDGTTSTKHSQN
Ga0209808_10399961	3300026523	Soil	DAYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAFPLIFLLIALIPTIKVVVNMVHALEGTGPTKHSQN
Ga0209806_10604551	3300026529	Soil	ADTVSDTYKNYRTWTPLLAYFFQIVAIGILYSVTSGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHALEGPGTTKHSQN
Ga0209806_12653221	3300026529	Soil	LAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHALEGTGPTKHSQN
Ga0209058_10214286	3300026536	Soil	DTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHGLEGTGTTKHSQN
Ga0209376_11142472	3300026540	Soil	YRIWAPLLAYFFQIVAIGILYSVTNGIAQPYFTAQQWAYPLIFLLIALIPTIKVVVNMVHALEGTGTAKHSQN
Ga0209161_101130511	3300026548	Soil	VSDTYKNYRTWTPLLAYFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHALEGTGTTKHSQN
Ga0209474_100968041	3300026550	Soil	AIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVINMVHALEGPSASKHSTNN
Ga0209076_10931072	3300027643	Vadose Zone Soil	KFGTQLANTVQDTYKNYKAWTPLLAFFFQIIAIGILYAVTAGIAQPYFGANPWAYPLIFLLIALIPTIKVVTSVVNALDGSTATKHSQN
Ga0209689_12394221	3300027748	Soil	YFFQIVAIGILYSVTNGIAQPYFTAQPWAYPLIFLLIALIPTIKVVVNMVHGLEGTGTTKHSQN
Ga0209580_100586971	3300027842	Surface Soil	TVHDAYKSYKTWTPLLAYFFQIVAIGILYAVSSGLASPYFSADPWAFPLIFLLIALIPTIKVVTGIVHGLEGTSATKHSQD
Ga0209590_100561931	3300027882	Vadose Zone Soil	PLLAYIFQIIAIVILYSVSNGIASQYFTSAPWAYPLIFLLIALLPTLRVVVNLVHALDGTPTAKHSTNN
Ga0137415_101095531	3300028536	Vadose Zone Soil	FGTQLANTVQDTYKNYKAWTPLLAFFFQIIAIGILYAVTAGIAQPYFGANPWAYPLIFLLIALIPTIKVVTSVVNALDGSTATKHSQN
Ga0137415_112995321	3300028536	Vadose Zone Soil	KSYKAWTPLLAFFFQIIAIGILYSVTAGIAQPYFGANPWAYPLIFLLIALIPTIKVVTSIVNALDGSATTKHSQN
Ga0257175_11123591	3300028673	Soil	FQIVAIGILYAVTAGIAAPYFSADPWAFPLIFLLIALVPTIKAVTSIVHALEGTSATKHSQA
Ga0307469_106915492	3300031720	Hardwood Forest Soil	FQIIAIGILYAVTAGIAQPYFGANPWAYPLIFLLIALIPTIKVVTSVVNALDGSTATKHSQN
Ga0307473_101008112	3300031820	Hardwood Forest Soil	FFFQIVAIGILYAVTAGIAAPYFAADPWAFPLIFLLIALVPTIKAVTSIVHALEGTSGTKHTQN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063564

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences