Metagenome / Metatranscriptome Family F063552

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063552
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	53 residues
Representative Sequence	GGVEGLRRYYEACLTGSGHRVKTTLEGDRRKTLESERERFMSMYLGAAR
Number of Associated Samples	103
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.33 %
% of genes near scaffold ends (potentially truncated)	98.45 %
% of genes from short scaffolds (< 2000 bps)	92.25 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.248 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (23.256 % of family members)
Environment Ontology (ENVO)	Unclassified (48.837 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.566 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.44% β-sheet: 0.00% Coil/Unstructured: 41.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00011	HSP20	10.08
PF03136	Pup_ligase	5.43
PF00989	PAS	2.33
PF06348	DUF1059	2.33
PF01161	PBP	1.55
PF00166	Cpn10	1.55
PF01464	SLT	0.78
PF07366	SnoaL	0.78
PF00308	Bac_DnaA	0.78
PF01244	Peptidase_M19	0.78
PF01070	FMN_dh	0.78
PF07721	TPR_4	0.78
PF12172	DUF35_N	0.78
PF06723	MreB_Mbl	0.78
PF08592	Anthrone_oxy	0.78
PF09650	PHA_gran_rgn	0.78
PF02776	TPP_enzyme_N	0.78
PF11356	T2SSC	0.78
PF00528	BPD_transp_1	0.78
PF00005	ABC_tran	0.78
PF13180	PDZ_2	0.78
PF02705	K_trans	0.78
PF05721	PhyH	0.78
PF00072	Response_reg	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	10.08
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	1.55
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	1.55
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.78
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	0.78
COG1077	Cell shape-determining ATPase MreB, actin-like superfamily	Cell cycle control, cell division, chromosome partitioning [D]	0.78
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.78
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.78
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.78
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.25 %
Unclassified	root	N/A	7.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.25 %
Unclassified	root	N/A	7.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.25 %
Unclassified	root	N/A	7.75 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	51.94 %
Unclassified	root	N/A	7.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.10 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.55 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	51.94 %
Unclassified	root	N/A	7.75 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.65 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.55 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	51.94 %
Unclassified	root	N/A	7.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.65 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.55 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	24.03 %
Unclassified	root	N/A	7.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.65 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.55 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.78 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	24.03 %
Unclassified	root	N/A	7.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.65 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.55 %
Ideonella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella	0.78 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	24.03 %
Unclassified	root	N/A	7.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.65 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.55 %
unclassified Ideonella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella → unclassified Ideonella	0.78 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	24.03 %
Unclassified	root	N/A	7.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.65 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.55 %
Ideonella sp. B508-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella → unclassified Ideonella → Ideonella sp. B508-1	0.78 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10112350	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300002561\|JGI25384J37096_10169686	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300002908\|JGI25382J43887_10043530	All Organisms → cellular organisms → Bacteria	2441	Open in IMG/M
3300002908\|JGI25382J43887_10344419	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	634	Open in IMG/M
3300002912\|JGI25386J43895_10054389	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300004268\|Ga0066398_10228733	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	502	Open in IMG/M
3300005166\|Ga0066674_10021047	All Organisms → cellular organisms → Bacteria → Proteobacteria	2816	Open in IMG/M
3300005174\|Ga0066680_10877943	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300005179\|Ga0066684_11111248	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	505	Open in IMG/M
3300005180\|Ga0066685_10609444	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	751	Open in IMG/M
3300005186\|Ga0066676_10677550	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	701	Open in IMG/M
3300005332\|Ga0066388_100087407	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3523	Open in IMG/M
3300005445\|Ga0070708_100093355	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2743	Open in IMG/M
3300005445\|Ga0070708_102106716	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	521	Open in IMG/M
3300005447\|Ga0066689_10452915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300005447\|Ga0066689_10484902	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	778	Open in IMG/M
3300005450\|Ga0066682_10170670	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1389	Open in IMG/M
3300005451\|Ga0066681_10561977	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	704	Open in IMG/M
3300005468\|Ga0070707_100122996	All Organisms → cellular organisms → Bacteria	2519	Open in IMG/M
3300005468\|Ga0070707_102250100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300005471\|Ga0070698_102014851	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	531	Open in IMG/M
3300005552\|Ga0066701_10079066	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1881	Open in IMG/M
3300005552\|Ga0066701_10152839	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300005555\|Ga0066692_10295446	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300005568\|Ga0066703_10875395	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	512	Open in IMG/M
3300005576\|Ga0066708_10965336	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	530	Open in IMG/M
3300005598\|Ga0066706_10207811	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300005713\|Ga0066905_100109929	Not Available	1895	Open in IMG/M
3300006791\|Ga0066653_10362698	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	736	Open in IMG/M
3300006854\|Ga0075425_101146080	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	884	Open in IMG/M
3300006880\|Ga0075429_100829205	Not Available	810	Open in IMG/M
3300006904\|Ga0075424_100414740	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1436	Open in IMG/M
3300006914\|Ga0075436_101194577	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	574	Open in IMG/M
3300006969\|Ga0075419_10606127	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	769	Open in IMG/M
3300006969\|Ga0075419_10749226	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	696	Open in IMG/M
3300006969\|Ga0075419_11084759	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	586	Open in IMG/M
3300007258\|Ga0099793_10183978	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300009012\|Ga0066710_100856665	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300009012\|Ga0066710_101666647	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	973	Open in IMG/M
3300009012\|Ga0066710_103940604	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	556	Open in IMG/M
3300009012\|Ga0066710_104077003	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	546	Open in IMG/M
3300009012\|Ga0066710_104703922	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	510	Open in IMG/M
3300009012\|Ga0066710_104922522	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	500	Open in IMG/M
3300009038\|Ga0099829_11136567	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	647	Open in IMG/M
3300009100\|Ga0075418_11635957	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	700	Open in IMG/M
3300009137\|Ga0066709_100815498	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300009792\|Ga0126374_10089094	All Organisms → cellular organisms → Bacteria → Proteobacteria	1714	Open in IMG/M
3300010043\|Ga0126380_11274612	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	638	Open in IMG/M
3300010046\|Ga0126384_11563695	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300010117\|Ga0127449_1000739	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300010303\|Ga0134082_10175903	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300010304\|Ga0134088_10592670	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	551	Open in IMG/M
3300010329\|Ga0134111_10402593	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	586	Open in IMG/M
3300010329\|Ga0134111_10477317	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	544	Open in IMG/M
3300010336\|Ga0134071_10163250	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1088	Open in IMG/M
3300010336\|Ga0134071_10273016	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	845	Open in IMG/M
3300010336\|Ga0134071_10386360	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300010359\|Ga0126376_12068667	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	612	Open in IMG/M
3300010359\|Ga0126376_12528420	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	561	Open in IMG/M
3300010362\|Ga0126377_10679088	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300010366\|Ga0126379_10029347	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	4267	Open in IMG/M
3300010398\|Ga0126383_10657125	Not Available	1124	Open in IMG/M
3300010398\|Ga0126383_11086924	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	889	Open in IMG/M
3300012202\|Ga0137363_11066096	Not Available	687	Open in IMG/M
3300012205\|Ga0137362_10894759	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300012206\|Ga0137380_11772697	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	501	Open in IMG/M
3300012207\|Ga0137381_10862213	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	784	Open in IMG/M
3300012210\|Ga0137378_11869646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300012356\|Ga0137371_10708773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300012357\|Ga0137384_10329227	Not Available	1268	Open in IMG/M
3300012362\|Ga0137361_10054455	Not Available	3315	Open in IMG/M
3300012380\|Ga0134047_1202528	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	677	Open in IMG/M
3300012393\|Ga0134052_1079084	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	681	Open in IMG/M
3300012401\|Ga0134055_1234577	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	808	Open in IMG/M
3300012406\|Ga0134053_1087469	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300012406\|Ga0134053_1346357	Not Available	656	Open in IMG/M
3300012918\|Ga0137396_10059602	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2643	Open in IMG/M
3300012922\|Ga0137394_11221222	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	615	Open in IMG/M
3300012923\|Ga0137359_10753902	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300012923\|Ga0137359_10960311	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300012944\|Ga0137410_11083431	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	685	Open in IMG/M
3300012960\|Ga0164301_11913705	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	502	Open in IMG/M
3300012977\|Ga0134087_10422529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300015357\|Ga0134072_10165587	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300016319\|Ga0182033_10421302	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1133	Open in IMG/M
3300017654\|Ga0134069_1026339	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300017997\|Ga0184610_1251866	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	587	Open in IMG/M
3300018079\|Ga0184627_10220002	Not Available	1002	Open in IMG/M
3300018082\|Ga0184639_10116225	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300019789\|Ga0137408_1201851	All Organisms → cellular organisms → Bacteria	2091	Open in IMG/M
3300026295\|Ga0209234_1078154	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300026296\|Ga0209235_1138768	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	990	Open in IMG/M
3300026297\|Ga0209237_1189107	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300026301\|Ga0209238_1022276	All Organisms → cellular organisms → Bacteria	2408	Open in IMG/M
3300026301\|Ga0209238_1037971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Ideonella → unclassified Ideonella → Ideonella sp. B508-1	1767	Open in IMG/M
3300026325\|Ga0209152_10449016	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300026329\|Ga0209375_1064210	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300026329\|Ga0209375_1168734	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300026333\|Ga0209158_1168302	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	794	Open in IMG/M
3300026334\|Ga0209377_1288051	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	544	Open in IMG/M
3300026342\|Ga0209057_1129792	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	909	Open in IMG/M
3300026342\|Ga0209057_1161255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300026354\|Ga0257180_1059493	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	549	Open in IMG/M
3300026524\|Ga0209690_1295054	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	513	Open in IMG/M
3300026529\|Ga0209806_1329554	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	512	Open in IMG/M
3300026532\|Ga0209160_1299726	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300026538\|Ga0209056_10458118	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	712	Open in IMG/M
3300026542\|Ga0209805_1251052	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300026547\|Ga0209156_10086911	All Organisms → cellular organisms → Bacteria	1575	Open in IMG/M
3300026552\|Ga0209577_10842802	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300027880\|Ga0209481_10078425	Not Available	1570	Open in IMG/M
3300027950\|Ga0209885_1020821	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	707	Open in IMG/M
3300030006\|Ga0299907_10163096	All Organisms → cellular organisms → Bacteria	1843	Open in IMG/M
3300031719\|Ga0306917_10154999	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1703	Open in IMG/M
3300031720\|Ga0307469_10349168	All Organisms → cellular organisms → Bacteria	1241	Open in IMG/M
3300031720\|Ga0307469_11665202	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	614	Open in IMG/M
3300031740\|Ga0307468_100443109	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1008	Open in IMG/M
3300031740\|Ga0307468_100620709	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	887	Open in IMG/M
3300031744\|Ga0306918_10232276	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300031744\|Ga0306918_11274783	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	566	Open in IMG/M
3300031820\|Ga0307473_10293601	Not Available	1019	Open in IMG/M
3300031897\|Ga0318520_10741937	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	615	Open in IMG/M
3300032054\|Ga0318570_10226391	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	847	Open in IMG/M
3300032059\|Ga0318533_11226767	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	548	Open in IMG/M
3300032063\|Ga0318504_10552766	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	552	Open in IMG/M
3300032180\|Ga0307471_101899762	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	745	Open in IMG/M
3300032180\|Ga0307471_103200919	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	580	Open in IMG/M
3300033417\|Ga0214471_10258097	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300034354\|Ga0364943_0070522	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.02%
Host-Associated	Host-Associated	6.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.70%
Plants	Host-Associated → Plants	6.98%
Aquatic	Environmental → Aquatic	2.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.98%
Sediment	Environmental → Aquatic → Sediment	2.33%
Floodplain	Environmental → Terrestrial → Floodplain	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.98%
Loam	Environmental → Terrestrial → Soil → Loam	6.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.33%
Sand	Environmental → Terrestrial → Soil → Sand	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.78%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	36.43%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.33%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.78%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	13.18%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	12.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.78%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010117	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027950	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50 (SPAdes)	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_101123502	3300002558	Grasslands Soil	ATGGPEGLRRYYEACLTDSARRVKTTLERERRRTLESERERFMSIYLGAAR*
JGI25384J37096_101696862	3300002561	Grasslands Soil	GPEGLRRYYEACLTDSARRVKTTLERERRRTLESERERFMSIYLGAAR*
JGI25382J43887_100435301	3300002908	Grasslands Soil	HLIPGWKLKEHAENAFATGGVEGLRRYYEACLTSSGHRVKTTLEGDRRKTLESEREHFMSIYLGAAR*
JGI25382J43887_103444192	3300002908	Grasslands Soil	WKLKEHAERALATGGVEGLRRYYEACLFGSDHRVKTTLEGDRRKTLESERARLMAMYLGPARR*
JGI25386J43895_100543891	3300002912	Grasslands Soil	EHAENAFAKDGVEGLRRYYEACLTGSGHRVKTTLERDRRKTLESEREHFMSMYLGAAR*
Ga0066398_102287331	3300004268	Tropical Forest Soil	RFYEASLAGSGERVKTTLERDRRKTLESERERFMTLYLGAAR*
Ga0066674_100210471	3300005166	Soil	LRRYYEACLTGSGHRVKTTLEGDRRKTLESERERFMSMYLGAAR*
Ga0066680_108779431	3300005174	Soil	WELKEQAESALATGGTEGLRRYYEACLARSNRQIKTTLERDRRKTLESERERFMSIYLGAAR*
Ga0066684_111112481	3300005179	Soil	GPEGLRRYYEACLSGSDPRLKTTLEGDRRKTLESERARFMAMYLGPARR*
Ga0066685_106094441	3300005180	Soil	VEGLRRYYEACLSGSDHRVKTTLEGDRRKTLESERAHFMAMYLGPAWQ*
Ga0066676_106775501	3300005186	Soil	WNLKEHAENAFATGGVEELRRYYEACLTGSGHRVKTTLEGDRRKTLESERERFMSMYLGAAR*
Ga0066388_1000874071	3300005332	Tropical Forest Soil	KEQAENALATGGVEGLRRYYEACLTGSGQRVKTILEGGKRKTLESERDRFVSMYLGAAR*
Ga0070708_1000933551	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	TGGTEGLRRYYEACLARSSRQVRTTLERDRRKTLESERDRFMSIYLGAAR*
Ga0070708_1021067161	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	KLKEHAESALATRGVEGLRRYYEACLTGSDHRMKTTLESDRRKTLESERERFMAMYLGPAWR*
Ga0066689_104529151	3300005447	Soil	GVEGLRRYYEACLTGSDHRVKTTLEGDRRKTLESERERFMAMYLGPARR*
Ga0066689_104849023	3300005447	Soil	WELKEQAESALATGGTEGLRRYYEACLARSSRQVRTTLERDRRKTLESERDRFMSIYLGAAR*
Ga0066682_101706701	3300005450	Soil	GVEGLRRYYEACLSGSDHRVKTTLEGDRRKTLESERARFMAMYLGPARR*
Ga0066681_105619771	3300005451	Soil	TSGVEGLRRYYEACLSGSDHRVKTTLEGDRRKTLESERARFMAMYLGPARR*
Ga0070707_1001229961	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	WELKEQAESALATGGTEGLRRYYEACLARSSRQVKTTLERDRRKTLESERERFMSIYLGAAR*
Ga0070707_1022501002	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	HAESALATRGVEGLRRYYEACLTGSDHRVKTTLEGDRRKTLESERERFMAMYLGPARR*
Ga0070698_1020148512	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	ALATGGVEGLRRYYEACLTAGHRVKTTLEWQTKTLESERERFMSMYLGAAR*
Ga0066701_100790661	3300005552	Soil	RYYEACLTDSARRVKTTLERERRRTLESERERFMSIYLGAAR*
Ga0066701_101528394	3300005552	Soil	AESALATGGVEGLRRYYEACLSGSDHRLKTTLEGDRRKTLESERERFMAMYLGPAQQ*
Ga0066692_102954461	3300005555	Soil	KEHAESALATGGVEGLRRYYEACLSGSDHRLKTTLEGDRRKTLESERERFMAMYLGPAQQ
Ga0066703_108753951	3300005568	Soil	EWKLKEHAESALATGGPEGLRRYYEACLTDSARRVKTTLERERRRTLESERERFMSIYLGAAR*
Ga0066708_109653362	3300005576	Soil	WKLKEHAESALPTGGVEGLRRYYEACLTGSGQRVKTTLERDRRKTLESEHEHFMTIYLGAAR*
Ga0066706_102078111	3300005598	Soil	TGGVEGLRRYYEACLSGSDHRVKTTLEGDRRKTLESERAHFMAMYLGPAWQ*
Ga0066905_1001099291	3300005713	Tropical Forest Soil	AESALATGGVEGLRRFYEAALAGSGERVKATLERERRKTLESERERFMSLYLGAAR*
Ga0066653_103626984	3300006791	Soil	YYEACLTGSGQRVKTTLERDRRKTLESEHEHFMTIYLGAAR*
Ga0075425_1011460802	3300006854	Populus Rhizosphere	GLRGYYEARLTGSCLRVKTTLERDRRKTLESERERFIAIYLGAAR*
Ga0075429_1008292051	3300006880	Populus Rhizosphere	TDGVEGLRRYYDACLSGSGHRVKTILEGDKRKTLESERERFMSMYLGAAR*
Ga0075424_1004147402	3300006904	Populus Rhizosphere	MLAVVEGLRRYYEACLTGSGHRVKTTLEGGKRKTLESERDRFMSIYLGAAR*
Ga0075436_1011945771	3300006914	Populus Rhizosphere	WKLKDQAESALAAGGVEGLRRFYEACLIGSDHRVKATLEGDRRKTLESERQRFMAMYLGPAR*
Ga0075419_106061272	3300006969	Populus Rhizosphere	GWKLKEGAENALVAGGAEGLRRYYEACLTGPGHGVKTTLERDRRRTLESEREHFMSMYLGAAR*
Ga0075419_107492262	3300006969	Populus Rhizosphere	LRRYYDACLSGSGHRVKTILEGDKRKTLESERERFMSMYLGAAR*
Ga0075419_110847592	3300006969	Populus Rhizosphere	VREGLRRYYEACLTGSDHRVKTTLEGDRRKTLESERERFMAMYLGP
Ga0099793_101839783	3300007258	Vadose Zone Soil	YYEACLARQSHQVKTTLEGDRRKTLQSERDRFMSIYLGAAR*
Ga0066710_1008566651	3300009012	Grasslands Soil	LKEHAESALATGGVEGLRRYYEACLSGSDHRLKTTLEGDRRKTLESERERFMAMYLGPAQ
Ga0066710_1016666473	3300009012	Grasslands Soil	ATGGVEGLRRYYEACLSGSDHRVKTTLEGDRRKTLESERARFMAMYLGPARR
Ga0066710_1039406041	3300009012	Grasslands Soil	GGIEGLRRYYEACLTGSGHRVKTTLERDRRKTLESERERFTSIYLGAAR
Ga0066710_1040770032	3300009012	Grasslands Soil	LKEHAESALATGGVEGLRRYYEACLTGSDHRVKTTLEGDRRKTLESERERFMAMYLGPAR
Ga0066710_1047039221	3300009012	Grasslands Soil	ESALATGGIEGLRRYYEACLTGSGHRVKTTLERDRRKTLESERERFTSIYLGAAR
Ga0066710_1049225221	3300009012	Grasslands Soil	WKLKEHAESALATGGVEGLRRYYEACLSGPDHRVKTTLEGDRRKTLESERARFMAMYLGPARR
Ga0099829_111365672	3300009038	Vadose Zone Soil	YYEACLTGSGHRVKTTLEGDRRKTLESEREHFMSQS*
Ga0075418_116359572	3300009100	Populus Rhizosphere	GGVEGLRRYYEACLSGSDHGVKTTLEGDRRKTLELERERFMAMYLGPARQ*
Ga0066709_1008154982	3300009137	Grasslands Soil	ATGGVEGLRRYYEACLSGSDHRVKTTLEGDRRKTLESERAHFMAMYLGPAWQ*
Ga0126374_100890945	3300009792	Tropical Forest Soil	VEGLRRFYEASLTASGDRLKTTLERDRRKTLESERERFMSLYLGAVR*
Ga0126380_112746122	3300010043	Tropical Forest Soil	WDLKEQAQSALATGGIEGLRRYYDACLARCSPNIKTTLESDRRKTLESERDRFMSLYLGAPR*
Ga0126384_115636952	3300010046	Tropical Forest Soil	AGGVEGLRRFYEACLIGSDHRVKATLEGDRRKTLESERQRFMAMYLGPAR*
Ga0127449_10007392	3300010117	Grasslands Soil	WKLKEHAENAFAKDGVEGLRRYYEACLTGSGHRVKTTLERDRRKTLESEREHFMSMYLGAAR*
Ga0134082_101759033	3300010303	Grasslands Soil	VEGLRRYYEACLTGSGHRVKTTLERDRRKTLESEREHFMSIYLGAAR*
Ga0134088_105926701	3300010304	Grasslands Soil	ESALPTGGVEGLRRYYEACLTGSGQRVKTTLERDRRKTLESEHEHFMTIYLGAAR*
Ga0134111_104025933	3300010329	Grasslands Soil	LAAGGIEGLRRYYDAYLARRDHQIKATLERDRRKTLESERERFMSLYLGAAR*
Ga0134111_104773171	3300010329	Grasslands Soil	LRRYYEACLSGSDHRVKTTLEGDRRKTLESERARFMAMYLGPARR*
Ga0134071_101632503	3300010336	Grasslands Soil	GVEGLRRYYEACLTGSGHRVKTTLEGDRRKTLESKRERFMSMYLGAAR*
Ga0134071_102730161	3300010336	Grasslands Soil	GLRRYYDACLARSSHQIKTTLERDRRKTLESERDHFMSIYLGAAR*
Ga0134071_103863603	3300010336	Grasslands Soil	LARSNRQIKTTLERDRRKTLESERERFISIYLGAAR*
Ga0126376_120686671	3300010359	Tropical Forest Soil	LATGGIEGLRRYYEACLAGSGLTGAGHRVKTALEGGGRKTLESEREHFMAIYLGAAR*
Ga0126376_125284202	3300010359	Tropical Forest Soil	FATGGVEGLRRFYEASLAASGDRVKTTLERDRRKTLESERERFMSLYLGAVR*
Ga0126377_106790883	3300010362	Tropical Forest Soil	ESALAAGGVEGLRRFYEACLIGSDHRVKATLEGDRRKTLESERQRFMAMYLGPAR*
Ga0126379_100293471	3300010366	Tropical Forest Soil	EGLRRFYEASLAGSDERVKTTLERDRRKTLESERERFMSLYLGAAR*
Ga0126383_106571251	3300010398	Tropical Forest Soil	EQAENALATGGVEGLRRYYEACLTGSGHRVKTILESDKRKTLESERDRFMSMYLGAAR*
Ga0126383_110869244	3300010398	Tropical Forest Soil	RRFYEASLARSDKRVKTTLERDRRKTLESERERFISLYLGAAQ*
Ga0137363_110660961	3300012202	Vadose Zone Soil	IPDWKLKEHAESALATGGVEGLRRYYEACLTGSGHRVKTTLEGDRRKTLESERERFMSMYLGAAR*
Ga0137362_108947592	3300012205	Vadose Zone Soil	LKEQAESALATGGTEGLRRYYEACLARSSRQVKTTLERDRRKTLESERERFMSIYLGAAR
Ga0137380_117726971	3300012206	Vadose Zone Soil	IDGLRRYYEACLTSSGHRVKTTLERDRRKTLESERERFMSIYLGAAR*
Ga0137381_108622132	3300012207	Vadose Zone Soil	RWSHDIKTTLELDRRKTLESERHRFMSIYLGAAR*
Ga0137378_118696461	3300012210	Vadose Zone Soil	EHAESALATRGVEGLRRYYEACLTGSDHRVKTTLEGDRRKTLESERERFMAMYLGPARR*
Ga0137371_107087731	3300012356	Vadose Zone Soil	LVTRGVEGLRRYYEACLTGSDHRVKTTLEGDRRKTLESERERFMAMYLGPARR*
Ga0137384_103292271	3300012357	Vadose Zone Soil	ARSRAADPDYEACLTGSDHRLKTTLEGDRRKTLESERERFMAMYLGPARR*
Ga0137361_100544551	3300012362	Vadose Zone Soil	TGGVEGLRRYYEACLTGSGHRVKTTLETDRRKTLESERERFMSMYLGAAR*
Ga0134047_12025281	3300012380	Grasslands Soil	GGVEGLRRYYEACLTGSGHRVKTTLEGDRRKTLESERERFMSMYLGAAR*
Ga0134052_10790843	3300012393	Grasslands Soil	GWKLKEHAERALAAGGVEGLRWYYEACLSGSDPRLKTTLEGDRRKTLESERARFMAMYLGPARR*
Ga0134055_12345771	3300012401	Grasslands Soil	GWTLKEHAESALAKGGAEGLRRFYEASLAGSGDLVRTTLERDRRKTLESERERFMSLYLGAAR*
Ga0134053_10874691	3300012406	Grasslands Soil	IPGWKLKEHAESALAAGGVEGLRRYYEACLTGSGHRVKTTLERDRRKTLESEREHFMSMYLGAAR*
Ga0134053_13463572	3300012406	Grasslands Soil	KEQAQSALATGGIDGLRRYYDACLARWSPKIKTTLERERRKTLESERDRFMSLYLGAAR*
Ga0137396_100596023	3300012918	Vadose Zone Soil	GGVEGLRRYYEACLSGSDHRLKTTLEGDRRKTLESERERFMAMYLGPARR*
Ga0137394_112212222	3300012922	Vadose Zone Soil	GLRRYYDACLARSSHQLKTTLERDRRKTLESERDHFMSIYLGAAR*
Ga0137359_107539023	3300012923	Vadose Zone Soil	LARSSHQVKTTLERDRRKTLESERERFMSIYLGAPR*
Ga0137359_109603112	3300012923	Vadose Zone Soil	ELKEQAESALATGGTEGLRRYYEACLARSSRQVRTTLERDRRKTLESERDRFMSIYLGAAR*
Ga0137410_110834311	3300012944	Vadose Zone Soil	TGGIEGLRRYYDACLARSSHQVKTTLEHDRRKTLESERDHFMSIYLGAAR*
Ga0164301_119137051	3300012960	Soil	WELKEQAENALAAGGTEGLRRYYEACLGRWSHEIKTTLERDRRKTLESERHRFMAIYLGAAR*
Ga0134087_104225291	3300012977	Grasslands Soil	AESALATRGVEGLRRYYEACLTGSDHRVKTTLEGDRRKTLESERERFMAMYLGPARR*
Ga0134072_101655871	3300015357	Grasslands Soil	TGGVEGLRRYYEACLTGSGHRVKTTLEGDRRKTLESEREHFMSMYLGAAR*
Ga0182033_104213022	3300016319	Soil	WTLKEHAESALATGGVEGLRRFYEASLAKLDKRVKTTLESDRRRTLESERERFMSLYLGAAR
Ga0134069_10263391	3300017654	Grasslands Soil	LRRYYEACLTGSGHRVKTTLERDRRKTLESEREHFMSIYLGAAR
Ga0184610_12518661	3300017997	Groundwater Sediment	GWKLNEHAENAFATGGVEGLRRYYEACLTGSGHRVKTTLERDRRKTLESEREHFMSIYLGAAR
Ga0184627_102200022	3300018079	Groundwater Sediment	GLRRYYEACLTGSGHRVKTTLERDRRKTLESEREHFMSIYLGAAR
Ga0184639_101162254	3300018082	Groundwater Sediment	ESALATGGIEGLRRYYEACLTGSGHRVKTTLERDRRKTLESERERFMAIYLGAAW
Ga0137408_12018511	3300019789	Vadose Zone Soil	PGWKLKGWKLKEHAESALATGGAEGLRRYYEACLAGSDHRLKTTLEGDRRKTLESERARFMAMYLGPARR
Ga0209234_10781542	3300026295	Grasslands Soil	GWKLKEHAENAFAKDGVEGLRRYYEACLTGSGHRVKTTLERDRRKTLESEREHFMSMYLGAAR
Ga0209235_11387681	3300026296	Grasslands Soil	GGTEGLRRYYEACLARSSRQVRTTLERDRRKTLESERDRFMSIYLGAAR
Ga0209237_11891073	3300026297	Grasslands Soil	EACLARSSRQVKTTLERDRRKTLESERERFMSIYLGAAR
Ga0209238_10222761	3300026301	Grasslands Soil	YYEACLTGSGHRVKTTLERDRRKTLESEREHFMSIYLGAAR
Ga0209238_10379711	3300026301	Grasslands Soil	AFGTGGVEGLRRYYEACLTGPGHHVTTTLERDRRKTLQSEREHFMSIYLGAAR
Ga0209152_104490161	3300026325	Soil	IPGWELKEQAESALATGGTEGLRRYYEACLARSSRQVRTTLERDRRKTLESERDRFMSIYLGAAR
Ga0209375_10642103	3300026329	Soil	ALATSGVEGLRRYYEACLSGSDHRVKTTLEGDRRKTLESERARFMAMYLGPARR
Ga0209375_11687341	3300026329	Soil	EGLRRYYEACLTGSGHGVKTTLERDRRKTLESEREHFMSIYLGAAR
Ga0209158_11683021	3300026333	Soil	GGVEGLRRYYEACLTGSGHRVKTTLEGDRRKTLESERERFMSMYLGAAR
Ga0209377_12880512	3300026334	Soil	PGWKLKEHAESALATGGIEGLRRYYEACLTGSGLRVKTTLERDRRKTLESERERFISIYLGAAR
Ga0209057_11297922	3300026342	Soil	RYYDACLARWSHQIRTTLERDRRKTLESERERFMSIYLGAAR
Ga0209057_11612552	3300026342	Soil	HAESALATRGVEGLRRYYEACLTGSDHRVKTTLEGDRRKTLESERERFMAMYLGPARR
Ga0257180_10594932	3300026354	Soil	PGWKLKEHAENAFATGGVEGLRRYYEACLTGSGHRVKTTLEGDRRKTLESEREHFMSIYLGAAR
Ga0209690_12950542	3300026524	Soil	KDGVEGLRRYYEACLTGSGHRVKTTLERDRRKTLESEREHFMSMYLGAAR
Ga0209806_13295541	3300026529	Soil	EWKLKEHAESALATGGPEGLRRYYEACLTDSARRVKTTLERERRRTLESERERFMSIYLGAAR
Ga0209160_12997261	3300026532	Soil	TDGVEGLRRYYEACLTGSGHRVKTTLERDRRKTLESKREHFMSMYLGAAR
Ga0209056_104581182	3300026538	Soil	AESALPTGGVEGLRRYHEACLTGSGQRVKTTLERDRRKTLESEHEHFMTIYLGAAR
Ga0209805_12510522	3300026542	Soil	NAFATGGIEGLRRYYEACLTGSGHRVKTTLERDRRKTLESEREHFMSMYLGAAR
Ga0209156_100869111	3300026547	Soil	EGLRRYYEACLTGSGHRVKTTLERDRRKTLESEREHFMSIYLGAAR
Ga0209577_108428021	3300026552	Soil	LARSNRQIKTTLERDRRKTLESERERFMSIYLGAAR
Ga0209481_100784252	3300027880	Populus Rhizosphere	LRRYYDACLSGSGHRVKTILEGDKRKTLESERERFMSMYLGAAR
Ga0209885_10208211	3300027950	Groundwater Sand	EHAESALATGGVEGLRRYYEACLAGSDHRLKTTLEGDRRKTLESERARFMAMYLGPARW
Ga0299907_101630961	3300030006	Soil	LRRYYEACLIGSDHRVKTTLERDRRRTLESEREHFMAVYLGAAR
Ga0306917_101549991	3300031719	Soil	KERAESALATGGVEGLRRFYEACLAGSGDRVKTTLERHRRKTLESQRERFMSLYLGAAR
Ga0307469_103491683	3300031720	Hardwood Forest Soil	KEQAESALATGGIEGLRRYYDACLARSSHQIKTTLERDRRKTLESERDHFMSIYLGAAR
Ga0307469_116652021	3300031720	Hardwood Forest Soil	LRRYYDACLARSSPRIKTTLDRERRKTLESERDRFMSIYLGAAR
Ga0307468_1004431091	3300031740	Hardwood Forest Soil	ELKEQAESALAAGGTEGLRRYYDACLARWSHDIKTTLERDRRKTLQSERHRFMSIYLGAA
Ga0307468_1006207093	3300031740	Hardwood Forest Soil	EGLRRYYEACLGRWSHEIKTTLERDRRKTLESERHRFMAIYLGAAR
Ga0306918_102322761	3300031744	Soil	QAESALTTGGVEGLRRFYEASLAASGDRVNTTLERDRRKTLESEREHFMSLYLGAAR
Ga0306918_112747832	3300031744	Soil	SALATGGVEGLRRFYEASLARSDQRVKTTLERDRRKTLESERDRFMSLYLGAAR
Ga0307473_102936012	3300031820	Hardwood Forest Soil	TGGIEGLRRYYEACLTGSGHRVKTTLEGDRRKTLESERERFMSMYLGAAR
Ga0318520_107419371	3300031897	Soil	LRRFYEASLAASGDRVNTTLERDRRKTLESEREHFMSLYLGAAR
Ga0318570_102263911	3300032054	Soil	YYEACLTGSDHRVKTTLESDRRKTLESERERFMAMYLGPAQR
Ga0318533_112267672	3300032059	Soil	LTTGGVEGLRRFYEASLAASGDRVNTTLERDRRKTLESEREHFMSLYLGAAR
Ga0318504_105527661	3300032063	Soil	PGWTLKEQAESALTTGGVEGLRRFYEASLAASGDRVNTTLERDRRKTLESEREHFMSLYLGAAR
Ga0307471_1018997623	3300032180	Hardwood Forest Soil	LKEHAESALATGGIEGLRRYYEACLTGPGHPVKTTLERDRRKTLESERERFISIYLGAAR
Ga0307471_1032009192	3300032180	Hardwood Forest Soil	LATGGTEGLRRYYDACLARWSHDIKTTLERDRRKTLQSERHRFMAIYLGAAR
Ga0214471_102580973	3300033417	Soil	LIPDWKLKEQAGNALATGGVEGLRRYYEACLIGSGHQVKATLERDRRKTLESEREHFMSMYLGAAR
Ga0364943_0070522_1065_1184	3300034354	Sediment	ETCLARSSPQIKTTLERERRKTLESERDRFMSLYLGAAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063552

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences