Metagenome / Metatranscriptome Family F063535

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063535
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	96 residues
Representative Sequence	EQPPVVLKPAEWLSSLPRAPLIFCGDGANRYRSLIEEEPEWSIHAMDLYLASTIAELADTPNSGPLAPLYVRRTDAEIARESIGSPNS
Number of Associated Samples	108
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.78 %
% of genes near scaffold ends (potentially truncated)	99.22 %
% of genes from short scaffolds (< 2000 bps)	93.02 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (15.504 % of family members)
Environment Ontology (ENVO)	Unclassified (23.256 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.589 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.76% β-sheet: 6.90% Coil/Unstructured: 60.34%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00583	Acetyltransf_1	57.36
PF04325	DUF465	12.40
PF13673	Acetyltransf_10	3.88
PF02666	PS_Dcarbxylase	3.10
PF01066	CDP-OH_P_transf	1.55
PF02811	PHP	0.78
PF13508	Acetyltransf_7	0.78
PF01624	MutS_I	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0688	Phosphatidylserine decarboxylase	Lipid transport and metabolism [I]	3.10
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	1.55
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	1.55
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	1.55
COG0249	DNA mismatch repair ATPase MutS	Replication, recombination and repair [L]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	77.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.55 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	53.49 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.10 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.55 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.49 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.55 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.55 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.49 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.55 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.55 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c1653079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101876087	All Organisms → cellular organisms → Bacteria → Acidobacteria	978	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104901966	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300000559\|F14TC_103160211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300002560\|JGI25383J37093_10069581	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300002912\|JGI25386J43895_10002165	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4950	Open in IMG/M
3300003267\|soilL1_10002857	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2519	Open in IMG/M
3300004139\|Ga0058897_11142774	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300004268\|Ga0066398_10181684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300004463\|Ga0063356_102254833	All Organisms → cellular organisms → Bacteria → Acidobacteria	830	Open in IMG/M
3300004799\|Ga0058863_11935213	All Organisms → cellular organisms → Bacteria	1060	Open in IMG/M
3300005171\|Ga0066677_10784682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300005177\|Ga0066690_10498845	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300005178\|Ga0066688_10032511	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2900	Open in IMG/M
3300005183\|Ga0068993_10254747	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300005186\|Ga0066676_10064070	All Organisms → cellular organisms → Bacteria	2135	Open in IMG/M
3300005186\|Ga0066676_11093687	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300005332\|Ga0066388_100785603	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M
3300005332\|Ga0066388_106214578	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300005332\|Ga0066388_106664152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300005332\|Ga0066388_107597554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300005353\|Ga0070669_101097644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	685	Open in IMG/M
3300005439\|Ga0070711_101684060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300005444\|Ga0070694_100650321	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300005447\|Ga0066689_10822514	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300005530\|Ga0070679_100553866	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300005536\|Ga0070697_101502810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300005538\|Ga0070731_10500148	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300005557\|Ga0066704_10772018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300005558\|Ga0066698_10645149	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300005568\|Ga0066703_10258339	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300005719\|Ga0068861_102177439	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005764\|Ga0066903_107886221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300006031\|Ga0066651_10504039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300006794\|Ga0066658_10476376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300006800\|Ga0066660_11045318	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300006846\|Ga0075430_101694624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300006871\|Ga0075434_101165055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	783	Open in IMG/M
3300006903\|Ga0075426_11542863	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300006904\|Ga0075424_101373582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300007004\|Ga0079218_10893105	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300009012\|Ga0066710_102612155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300009090\|Ga0099827_10387884	All Organisms → cellular organisms → Bacteria → Acidobacteria	1192	Open in IMG/M
3300009137\|Ga0066709_100237868	All Organisms → cellular organisms → Bacteria → Acidobacteria	2427	Open in IMG/M
3300009147\|Ga0114129_10368840	All Organisms → cellular organisms → Bacteria → Acidobacteria	1898	Open in IMG/M
3300009147\|Ga0114129_10676192	All Organisms → cellular organisms → Bacteria → Acidobacteria	1330	Open in IMG/M
3300009162\|Ga0075423_12416836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300009609\|Ga0105347_1091504	All Organisms → cellular organisms → Bacteria → Acidobacteria	1138	Open in IMG/M
3300009807\|Ga0105061_1104895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300010119\|Ga0127452_1117973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300010122\|Ga0127488_1042054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300010136\|Ga0127447_1019149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300010154\|Ga0127503_10414833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300010301\|Ga0134070_10187541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300010325\|Ga0134064_10314089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300010358\|Ga0126370_12146454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300010359\|Ga0126376_11420192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300010362\|Ga0126377_12494809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300010362\|Ga0126377_13034218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300010366\|Ga0126379_10028261	All Organisms → cellular organisms → Bacteria → Acidobacteria	4333	Open in IMG/M
3300010366\|Ga0126379_13006390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300010398\|Ga0126383_11442226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300010400\|Ga0134122_13128243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300011120\|Ga0150983_12798699	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300011120\|Ga0150983_13000019	All Organisms → cellular organisms → Bacteria → Acidobacteria	1097	Open in IMG/M
3300011120\|Ga0150983_15204672	All Organisms → cellular organisms → Bacteria → Acidobacteria	1165	Open in IMG/M
3300011409\|Ga0137323_1028947	All Organisms → cellular organisms → Bacteria → Acidobacteria	1227	Open in IMG/M
3300011439\|Ga0137432_1019721	All Organisms → cellular organisms → Bacteria	1936	Open in IMG/M
3300011445\|Ga0137427_10104310	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300012167\|Ga0137319_1015805	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300012189\|Ga0137388_11362945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300012200\|Ga0137382_10599957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300012202\|Ga0137363_11216199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300012205\|Ga0137362_11483819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300012207\|Ga0137381_11250324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300012208\|Ga0137376_10591833	All Organisms → cellular organisms → Bacteria → Acidobacteria	960	Open in IMG/M
3300012211\|Ga0137377_10936421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300012212\|Ga0150985_118827307	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300012393\|Ga0134052_1087294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300012469\|Ga0150984_112510077	All Organisms → cellular organisms → Bacteria → Acidobacteria	1011	Open in IMG/M
3300012474\|Ga0157356_1025111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300012519\|Ga0157352_1010206	All Organisms → cellular organisms → Bacteria → Acidobacteria	977	Open in IMG/M
3300012922\|Ga0137394_10014374	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6259	Open in IMG/M
3300012927\|Ga0137416_10835384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300012930\|Ga0137407_11206405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300012948\|Ga0126375_10131989	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300012948\|Ga0126375_11368138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300012948\|Ga0126375_11690367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300012948\|Ga0126375_12089262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300012971\|Ga0126369_10346538	All Organisms → cellular organisms → Bacteria → Acidobacteria	1506	Open in IMG/M
3300014969\|Ga0157376_10726156	All Organisms → cellular organisms → Bacteria → Acidobacteria	1001	Open in IMG/M
3300015357\|Ga0134072_10416876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300015371\|Ga0132258_10999911	All Organisms → cellular organisms → Bacteria	2113	Open in IMG/M
3300015371\|Ga0132258_13015873	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300015372\|Ga0132256_102614873	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300015373\|Ga0132257_101777591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300015373\|Ga0132257_103904747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300015374\|Ga0132255_105197818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300016270\|Ga0182036_10336812	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300016270\|Ga0182036_11229216	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300016294\|Ga0182041_10357571	All Organisms → cellular organisms → Bacteria → Acidobacteria	1230	Open in IMG/M
3300016294\|Ga0182041_11363792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300016422\|Ga0182039_10555259	All Organisms → cellular organisms → Bacteria → Acidobacteria	999	Open in IMG/M
3300016422\|Ga0182039_11593419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300018079\|Ga0184627_10439227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300018082\|Ga0184639_10078984	All Organisms → cellular organisms → Bacteria	1727	Open in IMG/M
3300018083\|Ga0184628_10200645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1044	Open in IMG/M
3300022531\|Ga0242660_1149594	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300022531\|Ga0242660_1162812	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300022532\|Ga0242655_10210841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300025314\|Ga0209323_10518378	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M
3300025923\|Ga0207681_10803459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300026313\|Ga0209761_1066999	All Organisms → cellular organisms → Bacteria	1923	Open in IMG/M
3300026329\|Ga0209375_1048165	All Organisms → cellular organisms → Bacteria	2144	Open in IMG/M
3300026335\|Ga0209804_1282662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300026342\|Ga0209057_1242342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300026343\|Ga0209159_1059453	All Organisms → cellular organisms → Bacteria	1821	Open in IMG/M
3300026537\|Ga0209157_1190207	All Organisms → cellular organisms → Bacteria → Acidobacteria	881	Open in IMG/M
3300026550\|Ga0209474_10738883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300027880\|Ga0209481_10436446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300031231\|Ga0170824_118507306	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300031231\|Ga0170824_127335410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300031421\|Ga0308194_10339302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300031716\|Ga0310813_11234535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300031854\|Ga0310904_10657670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300031879\|Ga0306919_11502641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300031912\|Ga0306921_10987204	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300031912\|Ga0306921_12191547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300032205\|Ga0307472_102364309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.95%
Host-Associated	Host-Associated	17.05%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.19%
Plants	Host-Associated → Plants	16.28%
Aquatic	Environmental → Aquatic	7.75%
Human	Host-Associated → Human	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.08%
Sediment	Environmental → Aquatic → Sediment	6.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.20%
Freshwater	Environmental → Aquatic → Freshwater	0.78%
Marine	Environmental → Aquatic → Marine	0.78%
Digestive System	Host-Associated → Human → Digestive System	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.02%
Loam	Environmental → Terrestrial → Soil → Loam	12.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.10%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.55%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.78%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.78%
Sand	Environmental → Terrestrial → Soil → Sand	0.78%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.10%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.78%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.20%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.10%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.55%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.55%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.78%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.78%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.78%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300010119	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010122	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010136	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011409	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012167	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT333_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012474	Unplanted soil (control) microbial communities from North Carolina - M.Soil.3.yng.040610	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025314	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 2	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_16530791	3300000033	Soil	WLASLPREPLVFCGDGAYRYRSLIQEQPEWSVHSMDLYLASTIAELAGMPNSGPLTPLYVRKTDAEIALESVGHQNS*
INPhiseqgaiiFebDRAFT_1018760871	3300000364	Soil	VVLKPAQWLASLPREPLVFCGDGAYRYRSLIQEQAEWSVHSMDLYLASTIAELAGMPNSGPLTPLYVRKTDAEITLESVGHQNS*
INPhiseqgaiiFebDRAFT_1049019661	3300000364	Soil	EWFASLPRQPLVFCGDAAIRHRQEIETQREWTVQPVDLYIASTIAELAGTPNRGPLEPLYVRKTDAEIARESIVGPST*
F14TC_1031602112	3300000559	Soil	NGRPDTLVEDRPPVVLKPAQWLDALPRAPLVFCGDGAYRYRLLIEEQSGWSVHSMDLYLASTIAELAVMPTSGPLAPLYVRKTDAEIALEGVGRPNS*
JGI25383J37093_100695813	3300002560	Grasslands Soil	VVLKPAEWFASLPRQTLVFCGDGALRYQSEIDETPGWSVHSMDLYLASTIADLAAAPSCGPLKPLYVRKTDAEIARESIGSPNS*
JGI25386J43895_100021651	3300002912	Grasslands Soil	AVYRRINTNGRSDTLIEEKPPLVLKPDEWLASLPGQPLVFCGDGAVRYQSLLQEREWRIHSMDLYLAGTVAELATTPXSGSLSPVYVRKPDAEIARESIGSPNS*
soilL1_100028575	3300003267	Sugarcane Root And Bulk Soil	RQEGGPVGDRLVEERPPLVLKPAEWVASLPREPLIFCGDGANRYRSLIESEPDWRIHEMDLYLASTIAELAVTPQCGPLAPLYVRKTDAEIALESIGRPNS*
Ga0058897_111427743	3300004139	Forest Soil	GDIYGAVYRRSRPGDAFDTLIEEQPPVVLKPAEWLAALPHDPLIFCGDGAIRYRSLLKERSWKIQELDLYLASTVAELAADPDSGPLAPLYVRKPDAEIARESVGSTNS*
Ga0066398_101816841	3300004268	Tropical Forest Soil	RGDVYGAVYRRDATDADSETLVEERPPVVLKPAQWLASLPREPLVFCGDGAYRYRSLIQEQPEWSVHSMDLYLASTIAELACMPNSGPLTPLYVRKTDAEIALESVGRPNS*
Ga0063356_1022548331	3300004463	Arabidopsis Thaliana Rhizosphere	GETLIEEQSAVVLKPAEWFASLPRQPLVFCGDAAIRYRSEIEAHGGWIVQPLDLYIASTIAELAVTPNRGPLEPLYVRKTDAEIARESIVGPST*
Ga0058863_119352131	3300004799	Host-Associated	LPQVPLVFFGDGANRYRSLIEQQPGWTIFSGDLYLASTIAELALTSNSGPLAPLYVRKTDAEIARESIASPSS*
Ga0066677_107846822	3300005171	Soil	RRRASDTVDTLVEEQPPVVLKPAEWVASLPRQPLIFCGDGALRYRSLLEGDSAWKIHSIDLYMASTIAELATTPNSGPLTPMYVRKADAEIARESIGSPNS*
Ga0066690_104988452	3300005177	Soil	RGDVYGAIYRRVRSQKPFDTLIEEQAPVVLKPAEWLAMLPREPLIFCGDGAARYRSLLENEQWRIEPVDLYLASTVAELAADPDAAPLAPLYVRKPDAEIARESVGSTNS*
Ga0066688_100325116	3300005178	Soil	VLKPAEWVASLPRQPLIFCGDGALRYRSLLEGERQWEIHSMDLYMASTIAELATTPNSGPLTPMYVRKADAEIARESIGSPNS*
Ga0068993_102547472	3300005183	Natural And Restored Wetlands	AQWLASLPRERIVFCGDGANRYRSLIEEQQGWELHLMDLYLASTIAELAAKPNSGPLAPLYVRKTDAEIALEGVGSSNS*
Ga0066676_100640701	3300005186	Soil	GEVYGALYRRTADTLVEERPAVVLKPAEWFASLPAEPLVFCGDGAVRYRAAIEERAEWGVHPMHGYLASTIAELVVTPNCRPLKPVYVRKTDAEIARESIASPNS*
Ga0066676_110936871	3300005186	Soil	GEIYGAVYCRSGESFIEEQSAVVLKPAEWFASLPRQPLVFCGDAAIRHREEIEAQRGWTVHPVDLYIASTIAELAGSPNRGPLEPLYVRKTDAEIARESIVGPST*
Ga0066388_1007856034	3300005332	Tropical Forest Soil	YRRIKGDFGCDTLVEEQAPVVLKPAQWFAALPRTPLFFCGDGAIRYRSFLEGKPGWCLQDMDLYLACPIAELAATSNSGPLSPLYVRKTDAEIARESIGSPSS*
Ga0066388_1062145781	3300005332	Tropical Forest Soil	IEEQSAVVLKPAEWFASLPRQPLVFCGDAAIRHREEIEAQRGWTLHPLDLYIASTIAELAGTPNRGPLEPLYVRKTDAEIARESIVGPST*
Ga0066388_1066641521	3300005332	Tropical Forest Soil	VVLKPAEWFASLPRLPLIFCGDGAFRYRSLIQEQAGWGIQSTDLYLASTIAELAAKPNCGPLAPLYVRKTDAEIALESIGSPNS*
Ga0066388_1075975542	3300005332	Tropical Forest Soil	PPVVLKPAEWLNSLPQVPLFFCGDGSKRYRSLIEAQPGWSIHPMDLYLASTIAELATTSNSGPLAPVYIRKTDAEIARESIGSPSS*
Ga0070669_1010976441	3300005353	Switchgrass Rhizosphere	DRLVEERSPVVLKPAEWVASLPPVPITFCGDGAYRYRSLIEERPSWSIFEMDFYLAATIAELAAMPNSGPLAPLYVRKTDAEIALESTRSPNS*
Ga0070711_1016840602	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	EVAPPVVLKPAEWLSSLPQVPVVFCGDALNRYRSLIEEQPGRTIHPMDLYLASTIAELATTSNSGPLAPVYVRKTDAEIARESIGSPSS*
Ga0070694_1006503211	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	GDVYGATYRRSETGPGIDRLVEERSPVVLKPAEWVASLPPVPITFCGDGAYRYRSLIEERPSWSIFEMDFYLAATIAELAAMPNSGPLAPLYVRKTDAEIALESTRSPNS*
Ga0066689_108225141	3300005447	Soil	SLPRQTLVFCGDGALRYQSEIDETPGWSVHSMGLYLASTIADLAAAPSCGPLKPLYVRKTDAEIARESIGSPNS*
Ga0070679_1005538661	3300005530	Corn Rhizosphere	GDTLVEEMPPVVLKPAQWLASLPQVPLVFFGDGANRYRSLIEQQPGWTIFSGDLYLASTIAELALTSNSGPLAPLYVRKTDAEIARESIASPSS*
Ga0070697_1015028102	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ATMIDARRGDIHGAVYRRTNTNGRSDTIIEEQRPVVLKPVEWLASLPRQPLVFCGDGAIRYQSLLQERGWRIHSMDLYLAGTVAELATTTSSGSLSPVYVRKPDAEIARESIGSPNS*
Ga0070731_105001481	3300005538	Surface Soil	EQPPVVLKPAQWLSALPREPLIFCGDGAIRYRALLEQQAQWTIKSVDLYLASTIAELAEDPAVGPLAPLYVRKPDAEIARESVGSTNS*
Ga0066704_107720181	3300005557	Soil	DIYGAVYRRINTNGRSDTLIEEKRPLVLKPDEWLASLPGQPLVFCGDGAIRYQSLLQEREWRIHSMDLYLAGTVAELATTPSSGSLSPVYVRKPDAEIARESIGSPNS*
Ga0066698_106451492	3300005558	Soil	DTLVEERPAVVLKPAEWFASLPRQSLVFCGDGALRYQSEIDETPGWSVHSMDLYLASTIAELAAAPSCGPLKPLYVRKTDAEIARESIGSPNS*
Ga0066703_102583393	3300005568	Soil	YGAIYRRNNTNGRGDTLIEEQRPVVLKPAQWVASLPRQPLIFCGDGAIRYRSLLEEAEWRIHSMDLYLAGTVAELATAASSGPLSPVYVRKPDAEIARESIGSPNS*
Ga0068861_1021774391	3300005719	Switchgrass Rhizosphere	AQWLASLPREPLVFCGDGAYRYRLLIEEQTGWSVHSMDLYLASTIAELAVMPTSGPLAPLYVRKTDAEIALEGVGRPNS*
Ga0066903_1078862212	3300005764	Tropical Forest Soil	VYGAVYRRAVGSDTLVEVLSPVVLKPAQWLASLPQVPLVLCGDGTNRYRSLIEEQPDWTIHPMDLYLASTIAELAMTSNGGPLAPVYVRKTDAEIARESIASPSS*
Ga0066651_105040391	3300006031	Soil	KPAEWFACLPGQPLILCGDGAVRYRSVIEERPEWRIHSMHLYLASTIAELVATPNCRPLKPLYVRKTDAEIARESIASPNS*
Ga0066658_104763761	3300006794	Soil	WLASLQRHALIFCGDGAIRHRALIEEETKWRIHSMDLYLATTIAELAVTPNSGPLGPLYVRKTDAEIARESIGSPNS*
Ga0066660_110453181	3300006800	Soil	DIYGAVYRRTQTNADIDTLVEEHPPVVLKPAQWLCSLPRKPLIFCGDAAIRYRSLIEEEPEWRIHWMDLYLASAIAELAATSNSGPLAPLYVRKTDAEIAREGIGSPNS*
Ga0075430_1016946242	3300006846	Populus Rhizosphere	SLVEDRAPVVLKPAQWLASLPREPLVFCGDGAYRYRSLIQEQPEWSVHSMDLYLAATIAELVGMPNSGPLTPLYVRKTDAEIALESVGNQDS*
Ga0075434_1011650551	3300006871	Populus Rhizosphere	TITDFLISPTIDARRGDVYGGLYRRIANNGFDRLVEERSPVVLKPAEWLASLPPEPVVFCGDGAYRYRSLIEERPSWTIHKMDFYLAATIAELAAMPTSGPLAPLYVRKTDAEIALESTGSPNS*
Ga0075426_115428632	3300006903	Populus Rhizosphere	YGAVYRRSGESFIEQQSAVVLKPAEWFASLPRQPLVFCGDAAIRHREEIEAQRGWTVHPVDLYIASTIAELAGTPNRGPLEPLYVRKTDAEIARESIVGPST*
Ga0075424_1013735822	3300006904	Populus Rhizosphere	ARRGDIYGAVYRRLAGTSNPDRLVEDRPPVVLKPAQWLASLSQEPLIFCGDGAYRYHTLIDRQNGWRIHSMDLYLASTIAALAHLPNSGPLAPLYVRKTDAEIARESVGRSNS*
Ga0079218_108931051	3300007004	Agricultural Soil	EEAAQSFASLPQQSILFCGDGAIRYRSDIHAEFGWSIRSMDLYLAETIAELAGTPNGGPLEPLYVRKTDAEIARESTVGPNS*
Ga0066710_1026121552	3300009012	Grasslands Soil	IEEQAPVVLKPAEWLGRLPREPLIFCGDGATRYQSLLEHEQWAVQSIDPYLASTVAELAAGQDAGPLAPLYVRKPDAEIARESVGSTNS
Ga0099827_103878841	3300009090	Vadose Zone Soil	LIEEQPPVVLKPAEWLAVLPREPLVFCGDGAVRYRPLLEQGQWRIKSIDLYLASTIAELAIDPNVGPLTPLYVRKPDAEIARESVGSTNT*
Ga0066709_1002378682	3300009137	Grasslands Soil	MTTLEELGWKTGIEGALVVPTTDARREEIYGAVYRRAGETLIEEQSAVVLKPAEWFASLPRQPLVFCGDAAIRYRPEIEAQRGWTVHPLDLYVASTIAELAGTPNRGPLEPLYVRKTDAEIARESIVGPST*
Ga0114129_103688401	3300009147	Populus Rhizosphere	HRDSLVEDRPPVVLKPAQWLASLPREPLVFCGDGAYRYLSLIQEQSEWCVHSMDLYLASTIAELACMPNSGSLTPLYVRKTDAEISLESVGHQDS*
Ga0114129_106761921	3300009147	Populus Rhizosphere	CGLYRHVITEGNVETLVEERPPVVLNPAQWLVSLPSAPLIFCGDGADRYRSLIEGQSGWSIHSMDLYLASTIAQLAATPNSGPLAPLYVRKTDAEIALESAGRPNS*
Ga0075423_124168362	3300009162	Populus Rhizosphere	LAWKTGLRDVPVATMIDARRGDIYGAVYRRVNTNGGSDTLIEEQRPVVLKPGEWLASLPRQPLVFCGDGAIRYESLIQEREWRILSMDLYLAGTVAELATTSSSGTLSPVYVRKPDAEIARESIGSPNS*
Ga0105347_10915041	3300009609	Soil	PPVVLKPAQWLASLPQVPIVFCGGGAHGYHSLIEGQSAWRIHFMDLYLASTIAELALRPGSEPLSPLYVRKTDAEIALEGTGRPNS*
Ga0105061_11048951	3300009807	Groundwater Sand	LASLPRRPMVFCGDGANRCRSEILVEAGWSIHAMDLYLASTIAELAFTPSRGPLQPLYVRKTDAELARESIVGPNS*
Ga0127452_11179732	3300010119	Grasslands Soil	ASLPRQPLVFCGDGAIRYESLIQEREWRIHSMHLYLAGTVAELATTPSGGALSPVYVRKPDAEIARESIGSPNS*
Ga0127488_10420541	3300010122	Grasslands Soil	KTGLRDVPVATMIDACRGDIYGAVYRRINTNGRSDTLIEEQRPVVLKPGEWLASLPRQPLVFCGDGAIRYESLIQEREWRIHSMDLYLAGTVAELATTPSSGSLSPVYVRKPDAEIARESIGSPNS*
Ga0127447_10191492	3300010136	Grasslands Soil	DTLIEEKPPLVLKPDEWLASLPGQPLVFCGDGAVRYQSLLQEREWRIHSMDLYLAGTVAELATTPSSGSLSPVYVRKPDAEIVRESIGSPNS*
Ga0127503_104148332	3300010154	Soil	LKPAQWLSSLPRVPLVFCGDGANRYRSLIEDEPDWTIHPMDLYLASTIAELAMTSNSGPLAPVYLRKTDAEIARESIGSPSS*
Ga0134070_101875411	3300010301	Grasslands Soil	EQRPVVLKPAQWVASLPRQPLIFCGDGAIRYRSLLEEAEWRIHSMHLYLAGTVAELATTPSGGALSPVYVRKPDAEIARESIGSPNS*
Ga0134064_103140891	3300010325	Grasslands Soil	NGRSDTLIEEKRPLVLKPDEWLASLPGQPLVVCGDGAIRYESLIQEREWRIHSMHLYLAGTVAELATTPSGVALSPVYVRKPDAEIARESIGSPNS*
Ga0126370_121464541	3300010358	Tropical Forest Soil	EQAPVVLKPAEWLEGLSKQHLTFCGDGAIRYRSLLETGEWKIHVMDLYLASIIAELAATPNAGPLAPVYIRKPDAEIARESVGSSNS*
Ga0126376_114201922	3300010359	Tropical Forest Soil	LAMLPQEPVIFCGDGALRYRSLLDRAIWRIEIVDLYLASTVAELAGHPDAGPLAPLYVRKPDAEIARESVGSTNS*
Ga0126377_124948091	3300010362	Tropical Forest Soil	MIDARRGDIYGAVYRRRNENVPGDTLVEERQPLVLKPAQWLSSLPEVSLVFCGDGADRYRSLIEGQPGWVIHPMNLYLAATMAELAMTSNSGPLAPLYVRKTDAEIARESIGSPSS*
Ga0126377_130342181	3300010362	Tropical Forest Soil	RAPVVLKPAEWVASLPMETIIFCGDGAYKYRSLIEDRPDWSIHSMDLYLASTIAELAVIPNSGPLTPLYVRKTDAEIAIESIGRSHS*
Ga0126379_100282617	3300010366	Tropical Forest Soil	LYRRIKGDFGRDTLVEEQAPVVLKPAEWFAALPRTPLFFCGDGAIRYRSFLEGKPGWCLQDMDLYLACPIAELAATSNSGPLSPLYVRKTDAEIARESIGSPSS*
Ga0126379_130063902	3300010366	Tropical Forest Soil	VYRRTRTAEVFDTLIEEQPPVVLKPAEWQAMLPQAPLILCGDGAIRYRSVLEHAQRRIETVDLYLASTVAELAAGPNAGPLAPLYVRKPDAEIARESVGSTNS*
Ga0126383_114422261	3300010398	Tropical Forest Soil	SGFDTLVEEHAPVVLKPATWLDEAPQQPLIFCGDGAIRYRSLIEVRPGWRIHPMDLYLASSIAELAITPCGGPLAPLYVRKTDAEVARESIGSTNP*
Ga0134122_131282431	3300010400	Terrestrial Soil	EADTLVEDRPPVVLKPAQWLESLPRQPLIFCGDGAYRYRALIEEQPGWRIHSMDLYLASTIAELAVMPVGEPLTPLYVRKTDAEIAFESIGRSNS*
Ga0150983_127986992	3300011120	Forest Soil	LIASMIYARRGDIYGAVYRRTRTSDAFDTLIEEQPPVVLKPAQWLAVLPPEPLVFCGDGPVRYRPLLDQGPWRINSIDLYLASTIAELAIDPNAAPLAPLYVRKPDAEIARESVGSTNT*
Ga0150983_130000193	3300011120	Forest Soil	EQPPVVLKPAEWLAALPHDPLIFCGDGAIRYRSLLKERSWKIQELDLYLASTVAELAADPDSGPLAPLYVRKPDAEIARESVGSTNS*
Ga0150983_152046723	3300011120	Forest Soil	LIEEQPPVVLKPAEWLAVLPREPLIFCGDGAIRYRSLLERDPWRIKSVDLYLASTIAELAADTNVEALAPLYVRRPDAEIARESVGSTNS*
Ga0137323_10289471	3300011409	Soil	RLVEERPPVVLKPAQWLASLPQVPIVFCGDGAHGYHSLIEGQSAWRIHFMDLYLASTIAELALRPGSVPLSPLYVRKTDAEIALESTGRPNS*
Ga0137432_10197211	3300011439	Soil	YRRVRENGSADRLVEERPPVVLKPAQWLASLPQVPIVFCGDGAHGYHSLIEGQSAWRIHFMDLYLASTIAELALRPGSEPLSPLYVRKTDAEIALEGTGRPNS*
Ga0137427_101043101	3300011445	Soil	PTIDARRGDVYGALYRRSAESRNSDRLVEQRSPVVLKPAEWVASLPREPLIFCGDGAYRYRSLLEQQPEWSIHSMDLYLASTIAELAVLPNSGPLTPLYVRKTDAEIALESTGRPNS*
Ga0137319_10158051	3300012167	Soil	VVLKPAQWLASLPQVPIVFCGDGAHGYHSLIEGQSAWRIHFMDLYLASTIAELALRPGSEPLSPLYVRKTDAEIALEGTGRPNS*
Ga0137388_113629451	3300012189	Vadose Zone Soil	IDARRGDIYGAVYRRARTGDAFDTLIEEQPPVVLKPAQWLAVLPREPLVFCGDGAVRYRSLLEQGQWKIKTVDLYLASTIAELAIDPNVGPLTPLYVRKPDAEIARESVGSTNT*
Ga0137382_105999571	3300012200	Vadose Zone Soil	RSDTLIEEQRPLVLKPDEWLASLPRQPLVFCGDGAIRYQSLLQEREWRIHSMDLYLAGTVAELATTPSSGSLSPVYVRKPHAEIARESIGSPNS*
Ga0137363_112161991	3300012202	Vadose Zone Soil	PLVFCGDGAVRYRPLLEQGPWRINSIDLYLASTIAELAIDPNAAPLAPLYVRKPDAEIARESVGSTNT*
Ga0137362_114838192	3300012205	Vadose Zone Soil	LSREPLIFCGDGARRYRSLIEQRPEWTIHAMDLYLASTIAEMAATSNKGPLAPLYVRMTDAEVARESIGSPNS*
Ga0137381_112503242	3300012207	Vadose Zone Soil	GADTLVEEQPPVVLKPAQWLASLSREPLIFCGDGANRYRSLIEEQPEWSIHSMDLYLASTIAEMAATPNSGPLAPLYVRKTDAEIARESIGSPNS*
Ga0137376_105918331	3300012208	Vadose Zone Soil	YGAIYRRVRSQKPFDTLIEEQAPVVLKPAEWLAMLPREPLIFCGDGAARYRSLLEHEQWRIEPVDLYLASAVAELAADPDAAPLAPLYVRKPDAEIARESVGSTNS*
Ga0137377_109364211	3300012211	Vadose Zone Soil	YGAIYRRVRSQKPFDTLIEEQAPVVLKPAEWLAMLPREPLIFCGDGAARYRSLLENEQWRIEPADLYLASAVAELAADTDAAPLAPLYVRKPDAEIARESVGSTNS*
Ga0150985_1188273071	3300012212	Avena Fatua Rhizosphere	KPAEWLDSLPRVPLMFCGDGAERYRSLIEQQAGWGIHSMHLYLASTIAELATTTNSGPLAPLYVRKTDAEMARESIGSPNS*
Ga0134052_10872941	3300012393	Grasslands Soil	TGLRDVPIATMIDARRGDIYGAVYRRINTNGRSDTLIEEKRPLVLKPGEWLASLPRQPLVFCGDGAIRYESLIQEREWRIHSMHLYLAGTVAELATTPSGGALSPVYVRKPDAEIARESIGSPNS*
Ga0150984_1125100771	3300012469	Avena Fatua Rhizosphere	PPVVLKPAEWLAGLPHEPLIFCGDGANRYRSLIEEEPAWSIHSMDLYLASTIAELADTPNSGPLAPLYVRRTDAEIARESIGSPNS*
Ga0157356_10251112	3300012474	Unplanted Soil	LVEERSPVVLKPAQWLASMPREPLVFCGDGALRYSSLIEGAADWSIHGTDLYLASTIAELAANPNSGPLAPLYVRQTDAEIALESIGRPNS*
Ga0157352_10102061	3300012519	Unplanted Soil	APVVLKPAEWFAALPRTPLFFCGDGAIRYRSFLEGNPGWRLQDMDLYLACPIAELAASSNSGPLSPLYVRKTDAEIARESIGSPSS*
Ga0137394_100143741	3300012922	Vadose Zone Soil	KPAEWFASLPRRSLVFCGDGAIRYQSEIDETPGWSVHSMDLYLASTIAELAAAPSCGPLKPVYVRKTDAEIARESIGSPNS*
Ga0137416_108353843	3300012927	Vadose Zone Soil	SLPRKPLIFCGDAAARYRSLIEEVPEWRIRCVDLYLASTIAELAATSNSGPLAPMYVRKADAEIAREGIGSPNS*
Ga0137407_112064052	3300012930	Vadose Zone Soil	EEQRPVVLKPAQWVASLPRQPLIFCGDGAIRYRSLLQEREWSIHSMDLYLAGTVAELATTPSSGSLSPVYVRKPDAEIARESIGSPNS*
Ga0126375_101319891	3300012948	Tropical Forest Soil	WLASLPRKPLVFCGDGAYRYRSLIQECPEWSVHSMDLYLASTIAELASMPNSGPLTPLYVRKTDAEIALESVGRQNS*
Ga0126375_113681381	3300012948	Tropical Forest Soil	GLYKRRRASDSVDTLVEEQAPVVLKPAEWVASLPRQPLIFCGDGALRYRSLLEGPPQWEVHSMDLYMASTIAELAATSNSGPLTPMYVRKADAEIARESIGSPNS*
Ga0126375_116903671	3300012948	Tropical Forest Soil	EHAPVVLKPAEWWDKLPPQQLVFCGDGAVRYKQVIEERPGWSICAMDLYLASSIAELAITPNSGLLAPLYVRRTDAEIARESIGSPNP*
Ga0126375_120892621	3300012948	Tropical Forest Soil	TLVEEQAPVVLKPAEWFAALPRTPLFFCGDGAIRYRSFLEGKPGWCLQDMDLYLACPIAELAATSNSGPLSPLYVRKTDAEIARESIGSPSS*
Ga0126369_103465384	3300012971	Tropical Forest Soil	DVYGGLYRRAGGNGQRDSLVEDRPPVVLKPAQWLASLPREPLVFCGDGAYRYRSLIQEQPEWSVHSMDLYLASTIAELACMPNSGPLTPLYVRKTDAEIALESVGHQDS*
Ga0157376_107261563	3300014969	Miscanthus Rhizosphere	RPPVVLKPAQWLAALPRAPLVFCGDGAYRYRLLIEEQSGWSVHSMDLYLASTIAELAVMPTGGPLAPLYVRKTDAEIALEGVGRTNS*
Ga0134072_104168762	3300015357	Grasslands Soil	MIDARRGDIYGAVYRRINTNGRSDTLIEEQRPLVLKPDEWLASLPRQPLVFCGDGAIRYQSLLQEREWRIHSMDLYLAGTVAELATTPSSGSLSPVYVRKPDAEIARESIGSPNS*
Ga0132258_109999111	3300015371	Arabidopsis Rhizosphere	LAWKTGIYDLPIASVIDARRGDIYGAVHRRIRGNAEADTLVEDRPPVVLKPAQWLESLPRQPLIFCGDGAYRYRALIEEQPGWRIHSMDLYLASTIAELAVMPVGEPLTPLYVRKTDAEIAFESIGRSNS*
Ga0132258_130158733	3300015371	Arabidopsis Rhizosphere	FDTLIEERAPVVLKPAQWLEELPRQPLIFCGDGAIRYRSLVEEGNWRIHCMDLYLASTVAELAGTSNTGPLAPVYIRKPDAEIARESVGSPNS*
Ga0132256_1026148732	3300015372	Arabidopsis Rhizosphere	AVYRRSVETLIEEQSAVVLKPAEWFASLPRQPLVFCGDAAIRHRQEIEAQRGWTVPPVDLYIASTIAELAGTPNRGPLEPLYVRKTDAEIARESIVGPST*
Ga0132257_1017775911	3300015373	Arabidopsis Rhizosphere	RRGDIYGALYRRVGGSDGSETLVEEGPPVVLKPAQWLASLPPEPLIFCGDGAYRYRALIEQQPLWTVHSMHLYLASTIADLAVMPNPGPLAPLYVRKTDAEIALESVGRPNS*
Ga0132257_1039047471	3300015373	Arabidopsis Rhizosphere	PPVVLKPAQWLASLPQEPLFFCGDGAYRYRSLIQERPEWSVHSMDLYLASTIAELAGMPNSGPLTPLYVRKTDAEIALESVGHQDS*
Ga0132255_1051978181	3300015374	Arabidopsis Rhizosphere	PPVVLKPAEWLNSLPQVPLVFCGDGSNRYRSLIEDRPEWTIHPMDLYLASTIAELAMTSNCGPLAPVYVRKTDAEIARESIGSPNS*
Ga0182036_103368123	3300016270	Soil	GVPVVPMIDALRGDIYGAVYRHADTLIDEQKPVVLKPAQWLTSLPEVPLVFCGDGAIRYSSLIEGRPGWTIHPMDLYLASTIAELALTSNSGPLAPLYVRKPDAEIARESIGSPSS
Ga0182036_112292162	3300016270	Soil	VLKPAQWLTSLPEGPLVFCGDGAVRYSSLIECRPEWVIHGMDLYLASTIADLALTSNGGPLAPLYVRKTDAEIARESIGSPSS
Ga0182041_103575711	3300016294	Soil	DGGRLSERLVEDRPPVVLKPAEWFASLPRLPLIFCGDGAFRYRSLIQEQAGWSIQSTDLYLASTIAELAAKPNCGPLAPLYVRKTDAEIALESIGSPNS
Ga0182041_113637921	3300016294	Soil	RRGDIYGAIYRRERADGGGSDTLVEEMPPVVLKPAQWLALLPREPLAFCGDGACRYRSLIAERQDRLWTVSSVDLYLPSTIAELAANPDAGPLAPLYVRKPDAEIARESVGSTNS
Ga0182039_105552591	3300016422	Soil	RGDIYGAVYRHADTLIEEQKPVVLKPAQWLTSLPEVPLVFCGDGAIRYSSLIEGRPGWNIHQMDLYLASTIAELALTSNSGPLAPLYVRKPDAETARESIGSPRS
Ga0182039_115934191	3300016422	Soil	KNTDALVEVAPPVVLKPAEWLNSLPRVPLVFCGDGSNRYRSLIEDQPDWTIHSMDLYLASTIAELAMTSNSGPLAPVYVRKTDAEIARESIGSPSS
Ga0184627_104392271	3300018079	Groundwater Sediment	KPAEWLASLPRQPLVFCGDGANRYRSEIMAEAGWNIHPMDLYLASTIAELASTPNRGPLQPLYVRKTDAELARESIVGPNS
Ga0184639_100789844	3300018082	Groundwater Sediment	LASLPRQPLVFCGDGANRYRSEIMAEAGWNIHPLDVYLASTIAELASTPNRGPLQPLYVRKTDAELARESIVGPNS
Ga0184628_102006452	3300018083	Groundwater Sediment	GETLIEERSAVVLKRAEWLASLPRQPLIFCGDAAIRYRAEIEAEREWTVHTLDLYIASTMAELAGTPNRGPLEPLYVRKTDAEIARESIVGPST
Ga0242660_11495942	3300022531	Soil	LNSLPEVPLVFCGDGSNRYCSLIQEQPDWTIHPMDLYLASTIAELAMTSNGGPLAPVYVRKTDAEIARESIGSPSS
Ga0242660_11628121	3300022531	Soil	PRAPLFFCGDGAIRYRGLLEQDQRRIQAIDLYLASTIAELAADPNVELLTPLYVRKPDAEIARESVGSTNT
Ga0242655_102108412	3300022532	Soil	LPRTPLIFCGDGASRYRSLIEGEPDWSIHPMDLYLASTIAELADTPNSGPLAPLYVRRTDAEIARESIGSPNS
Ga0209323_105183782	3300025314	Soil	GLDTLIEERAPVVLKPAEWFASLSGRPLIFCGDGAIRYRPLIEGKPDWRIHPMDLYLASTIAEMASSPNCGPLAPLYVRKTDAEIARESIGSPNS
Ga0207681_108034591	3300025923	Switchgrass Rhizosphere	IDARRGDVYGGLYRRTANNGFDRLVEERSPVVLKPAEWVASLPPVPITFCGDGAYRYRSLIEERPSWSIFEMDFYLAATIAELAAMPNSGPLAPLYVRKTDAEIALESTRSPNS
Ga0209761_10669995	3300026313	Grasslands Soil	VEERPAVVLKPAEWFASLPRQSLVFCGDGALRYQSEIDETPGWSVHSMDLYLASTIADLAAAPSCGPLKPLYVRKTDAEIARESIGSPNS
Ga0209375_10481656	3300026329	Soil	DTLIEEQRPVVLKPAQWVASLPRQPLIFCGDGAIRYRSLLEEAEWRIHSMDLYLAGTVAELATAASSGPLSPVYVRKPDAEIARESIGSPNS
Ga0209804_12826622	3300026335	Soil	IEEQRPVVLKPAQWVASLPRQPLIFCGDGAIRYRSLLEEAEWRIHSMDLYLAGTVAELATAASSGPLSPVYVRKPDAEIARESIGSPNS
Ga0209057_12423422	3300026342	Soil	LRDVPVATMIDACRGDIYGAVYRRINTNGRSDTLIEEQRPVVLKPGEWLASLPRQPLVFCGDGAIRYESLIQEREWRIHSMHLYLAGTVAELATTPSGGALSPVYVRKPDAEIARESIGSPNS
Ga0209159_10594531	3300026343	Soil	MEGIAAANGKRGAGVTTLQALAWKTGLRDVPVATMIDACRGDIYGAVYRRINTNGRSDTLIEEQRPVVLKPGEWLASLPRQPLVFCGDGAIRYESLIQEREWRIHSMHLYLAGTVAELATTPSGGALSPVYVRKPDAEIARESIGSPNS
Ga0209157_11902071	3300026537	Soil	EERPPVVLKPAQWLASLPRVPLIFCGDGAYRYCALIEEQPGWSVHSMDLYLASTIAELAAMPNSGPLAPLYVRKTDAEIAVESVGRPNS
Ga0209474_107388831	3300026550	Soil	DVPIATMIDARRGDIYGAVYRRINTNGRSDTLIEEKRPLVLKPDEWLASLPGQPLVFCGDGAIRYQSLLQEREWRIHSMDLYLAGTVAELATTPSSGSLSPVYVRKPDAEIARESIGSPN
Ga0209481_104364462	3300027880	Populus Rhizosphere	GALYRRAGGNGHRDSLVEDRPPVVLKPAQWLASLPREPLLFCGDGAYRYRSLIQEQPEWSVHSMDLYLAATIAELVGMPNSGPLTPLYVRKTDAEIALESVGNQDS
Ga0170824_1185073063	3300031231	Forest Soil	QWLSSLPRVPLVFCGDGANRYRSMIEDEPDWTIHPMDLYLASTIAELAMTSNSGPLAPVYVRKTDAEIARESIGSPSS
Ga0170824_1273354101	3300031231	Forest Soil	EQPPVVLKPAEWLSSLPRAPLIFCGDGANRYRSLIEEEPEWSIHAMDLYLASTIAELADTPNSGPLAPLYVRRTDAEIARESIGSPNS
Ga0308194_103393022	3300031421	Soil	LPRAPLIFCGDGANRYCSAIEGKPEWSIHSMDLYLASTIAELASTSNSGPLAPLYVRKTDAEIARESIGGPNS
Ga0310813_112345351	3300031716	Soil	SLPRLPLVFCGDAAIRHRQEIEAHHGWTVHPTDLYIASTIAELAGTPKRGPLEPLYVRKTDAEIARESIIGPST
Ga0310904_106576702	3300031854	Soil	GDVYGAMYRRSETGPGIDRLVEERSPVVLKPAEWVASLPPVPITFCGDGAYRYRSLIEERPSWSIYEMDFYLAATIAELAAMPNSGPLAPLYVRKTDAEIALESTRSPNS
Ga0306919_115026412	3300031879	Soil	PAEWFASLPRLPLVFCGDGAFRYRSLIQEQAGWSIQSTDLYLASTIAELAAKPNCGPLAPLYVRKTDAEIALESIGSPNS
Ga0306921_109872043	3300031912	Soil	VLKPAEWFASLPRLPLIFCGDGAFRYRSLIQEQAGWSIQSTDLYLASTIAELAAKPNCGPLAPLYVRKTDAEIALESIGSPNS
Ga0306921_121915472	3300031912	Soil	ARRGDIYGAMYYRRSAGNDFDTLIEEEQPVVLKPAQWLAGLPRKQLIFCGDGALRYRALIEEEREWRIHSMDLYLASTIAELAVTPNGGPLAPLYVRKTDAEIARESIGSPNS
Ga0307472_1023643091	3300032205	Hardwood Forest Soil	RRGDVYVGLYRRIAGHSGSDTLVEEQEPVVLKPAQWLSSLPDVPLIFCGDGAERYRPLMEQGKRWSIHSMHLYLASTIAELAATANSGPLAPLYVRKTDAEIARESIGSPNS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063535

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences