Metagenome Family F063530

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063530
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	82 residues
Representative Sequence	MKTTLNADGKIGIPDEIRQTDHLTAGDSFELERLTPGHYLLTKQPPPGARFTVVTGEDGLPVIRTENGAITSRLVKDIESQTP
Number of Associated Samples	102
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.29 %
% of genes near scaffold ends (potentially truncated)	23.26 %
% of genes from short scaffolds (< 2000 bps)	88.37 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.868 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (34.108 % of family members)
Environment Ontology (ENVO)	Unclassified (41.085 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.310 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.41% β-sheet: 22.52% Coil/Unstructured: 63.06%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF01850	PIN	13.95
PF05016	ParE_toxin	2.33
PF09720	Unstab_antitox	2.33
PF00072	Response_reg	1.55
PF12831	FAD_oxidored	1.55
PF06439	3keto-disac_hyd	1.55
PF07883	Cupin_2	1.55
PF07676	PD40	0.78
PF07971	Glyco_hydro_92	0.78
PF13441	Gly-zipper_YMGG	0.78
PF00512	HisKA	0.78
PF02678	Pirin	0.78
PF00069	Pkinase	0.78
PF05973	Gp49	0.78
PF07963	N_methyl	0.78
PF04474	DUF554	0.78
PF01592	NifU_N	0.78
PF08279	HTH_11	0.78
PF13393	tRNA-synt_His	0.78
PF00133	tRNA-synt_1	0.78
PF01936	NYN	0.78
PF16576	HlyD_D23	0.78
PF01761	DHQ_synthase	0.78
PF02922	CBM_48	0.78
PF09154	Alpha-amy_C_pro	0.78
PF11028	DUF2723	0.78
PF00583	Acetyltransf_1	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.10
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.78
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.78
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.78
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.78
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.78
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	0.78
COG1811	Uncharacterized membrane protein YqgA, affects biofilm formation	Function unknown [S]	0.78
COG3537	Putative alpha-1,2-mannosidase	Carbohydrate transport and metabolism [G]	0.78
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.78
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.87 %
Unclassified	root	N/A	27.13 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.87 %
Unclassified	root	N/A	27.13 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.87 %
Unclassified	root	N/A	27.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.13 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	19.38 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	16.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.33 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.13 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	17.05 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	16.28 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.55 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.28 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	6.20 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	4.65 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.55 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.28 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.43 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	4.65 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.78 %
Verrucomicrobia bacterium GWF2_62_7	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium GWF2_62_7	0.78 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.78 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.28 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.43 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.78 %
Nevskia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia	0.78 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.78 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.78 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.78 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	0.78 %
Verrucomicrobia bacterium GWF2_62_7	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium GWF2_62_7	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.28 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.43 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.78 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.78 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.78 %
Verrucomicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	0.78 %
Sinorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium	0.78 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.78 %
Verrucomicrobia bacterium GWF2_62_7	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium GWF2_62_7	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.28 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.43 %
Sinorhizobium fredii group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium fredii group	0.78 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.78 %
Arachidicoccus	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Arachidicoccus	0.78 %
Verrucomicrobium spinosum	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → Verrucomicrobium spinosum	0.78 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.78 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.78 %
Verrucomicrobia bacterium GWF2_62_7	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium GWF2_62_7	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.13 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	16.28 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.43 %
Sinorhizobium fredii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium fredii group → Sinorhizobium fredii	0.78 %
Arachidicoccus ginsenosidivorans	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Arachidicoccus → Arachidicoccus ginsenosidivorans	0.78 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.78 %
Verrucomicrobium spinosum	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → Verrucomicrobium spinosum	0.78 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.78 %
Nevskia soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	0.78 %
Verrucomicrobia bacterium GWF2_62_7	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium GWF2_62_7	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17257143	All Organisms → cellular organisms → Bacteria	12380	Open in IMG/M
3300001213\|JGIcombinedJ13530_108776414	Not Available	580	Open in IMG/M
3300001686\|C688J18823_10413891	Not Available	871	Open in IMG/M
3300005093\|Ga0062594_102259302	Not Available	590	Open in IMG/M
3300005172\|Ga0066683_10090682	All Organisms → cellular organisms → Bacteria	1848	Open in IMG/M
3300005175\|Ga0066673_10344968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300005180\|Ga0066685_10222873	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1297	Open in IMG/M
3300005180\|Ga0066685_10798627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300005187\|Ga0066675_10592395	Not Available	833	Open in IMG/M
3300005332\|Ga0066388_101622571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1139	Open in IMG/M
3300005447\|Ga0066689_10167530	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300005450\|Ga0066682_10349592	Not Available	952	Open in IMG/M
3300005553\|Ga0066695_10527340	Not Available	722	Open in IMG/M
3300005558\|Ga0066698_10427461	Not Available	907	Open in IMG/M
3300005558\|Ga0066698_10525439	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	804	Open in IMG/M
3300005574\|Ga0066694_10154992	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300005586\|Ga0066691_10135891	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300005829\|Ga0074479_10004837	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	997	Open in IMG/M
3300005829\|Ga0074479_10534350	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1336	Open in IMG/M
3300005841\|Ga0068863_101371455	Not Available	714	Open in IMG/M
3300005842\|Ga0068858_101385822	Not Available	692	Open in IMG/M
3300006794\|Ga0066658_10820711	Not Available	526	Open in IMG/M
3300006796\|Ga0066665_10855773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Nevskia → Nevskia soli	710	Open in IMG/M
3300006796\|Ga0066665_11691698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Sinorhizobium → Sinorhizobium fredii group → Sinorhizobium fredii	501	Open in IMG/M
3300006797\|Ga0066659_11235053	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	624	Open in IMG/M
3300006893\|Ga0073928_10007933	All Organisms → cellular organisms → Bacteria	13519	Open in IMG/M
3300007788\|Ga0099795_10089108	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300009012\|Ga0066710_100925808	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1343	Open in IMG/M
3300009012\|Ga0066710_102222347	All Organisms → cellular organisms → Bacteria → PVC group	800	Open in IMG/M
3300009088\|Ga0099830_10470376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1023	Open in IMG/M
3300009089\|Ga0099828_11549881	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300009137\|Ga0066709_100020599	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6613	Open in IMG/M
3300009137\|Ga0066709_100110636	All Organisms → cellular organisms → Bacteria	3399	Open in IMG/M
3300009137\|Ga0066709_102216350	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	757	Open in IMG/M
3300009147\|Ga0114129_11770391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300009448\|Ga0114940_10175719	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300009610\|Ga0105340_1105106	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300010301\|Ga0134070_10189658	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300010301\|Ga0134070_10321961	Not Available	594	Open in IMG/M
3300010304\|Ga0134088_10309773	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	763	Open in IMG/M
3300010304\|Ga0134088_10402818	Not Available	667	Open in IMG/M
3300010322\|Ga0134084_10286506	Not Available	607	Open in IMG/M
3300010329\|Ga0134111_10116058	Not Available	1038	Open in IMG/M
3300010329\|Ga0134111_10570573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300010333\|Ga0134080_10586188	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300010333\|Ga0134080_10608097	Not Available	533	Open in IMG/M
3300010336\|Ga0134071_10100454	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1373	Open in IMG/M
3300010337\|Ga0134062_10469349	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300010391\|Ga0136847_11897678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300010400\|Ga0134122_10796387	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	901	Open in IMG/M
3300010400\|Ga0134122_13246529	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300011423\|Ga0137436_1018073	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300012160\|Ga0137349_1077916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300012189\|Ga0137388_10420398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1238	Open in IMG/M
3300012199\|Ga0137383_10094824	All Organisms → cellular organisms → Bacteria	2164	Open in IMG/M
3300012199\|Ga0137383_10858665	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	662	Open in IMG/M
3300012200\|Ga0137382_11163692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300012201\|Ga0137365_10161618	All Organisms → cellular organisms → Bacteria	1679	Open in IMG/M
3300012203\|Ga0137399_10492601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300012205\|Ga0137362_10259954	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300012205\|Ga0137362_10961107	Not Available	728	Open in IMG/M
3300012205\|Ga0137362_11052126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300012205\|Ga0137362_11542413	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → Verrucomicrobium spinosum	551	Open in IMG/M
3300012206\|Ga0137380_10652228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	917	Open in IMG/M
3300012206\|Ga0137380_10930519	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300012207\|Ga0137381_10344725	All Organisms → cellular organisms → Bacteria → PVC group	1298	Open in IMG/M
3300012207\|Ga0137381_11453778	Not Available	577	Open in IMG/M
3300012209\|Ga0137379_10002241	All Organisms → cellular organisms → Bacteria	17930	Open in IMG/M
3300012210\|Ga0137378_10000195	All Organisms → cellular organisms → Bacteria	41030	Open in IMG/M
3300012211\|Ga0137377_11042244	Not Available	748	Open in IMG/M
3300012211\|Ga0137377_11379058	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Arachidicoccus → Arachidicoccus ginsenosidivorans	634	Open in IMG/M
3300012228\|Ga0137459_1233905	Not Available	533	Open in IMG/M
3300012285\|Ga0137370_10367303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300012356\|Ga0137371_10051498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3182	Open in IMG/M
3300012356\|Ga0137371_10190227	All Organisms → cellular organisms → Bacteria	1608	Open in IMG/M
3300012359\|Ga0137385_10081191	All Organisms → cellular organisms → Bacteria	2880	Open in IMG/M
3300012361\|Ga0137360_11453097	Not Available	589	Open in IMG/M
3300012361\|Ga0137360_11497171	Not Available	579	Open in IMG/M
3300012362\|Ga0137361_10436308	All Organisms → cellular organisms → Bacteria → PVC group	1203	Open in IMG/M
3300012362\|Ga0137361_10649067	Not Available	966	Open in IMG/M
3300012362\|Ga0137361_10649919	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300012532\|Ga0137373_10828425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300012582\|Ga0137358_10351197	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300012683\|Ga0137398_10336268	Not Available	1020	Open in IMG/M
3300012922\|Ga0137394_10087589	All Organisms → cellular organisms → Bacteria	2610	Open in IMG/M
3300012922\|Ga0137394_10619647	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300012923\|Ga0137359_11304602	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300012925\|Ga0137419_10365462	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300012927\|Ga0137416_10593525	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300012929\|Ga0137404_10214079	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium GWF2_62_7	1638	Open in IMG/M
3300012944\|Ga0137410_11265190	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300013296\|Ga0157374_12807769	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300014325\|Ga0163163_10256685	All Organisms → cellular organisms → Bacteria	1799	Open in IMG/M
3300015242\|Ga0137412_10117780	All Organisms → cellular organisms → Bacteria	2154	Open in IMG/M
3300015359\|Ga0134085_10297321	Not Available	709	Open in IMG/M
3300017654\|Ga0134069_1142306	Not Available	799	Open in IMG/M
3300018008\|Ga0187888_1192344	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	814	Open in IMG/M
3300018017\|Ga0187872_10402481	Not Available	579	Open in IMG/M
3300018063\|Ga0184637_10192152	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1253	Open in IMG/M
3300018063\|Ga0184637_10359658	Not Available	874	Open in IMG/M
3300018079\|Ga0184627_10099380	All Organisms → cellular organisms → Bacteria	1535	Open in IMG/M
3300018433\|Ga0066667_10375816	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1140	Open in IMG/M
3300018433\|Ga0066667_11755724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300018468\|Ga0066662_12814073	Not Available	516	Open in IMG/M
3300018481\|Ga0190271_12518923	Not Available	616	Open in IMG/M
3300018482\|Ga0066669_10165331	All Organisms → cellular organisms → Bacteria	1648	Open in IMG/M
3300020140\|Ga0179590_1123517	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	703	Open in IMG/M
3300021080\|Ga0210382_10353939	Not Available	648	Open in IMG/M
3300022557\|Ga0212123_10040365	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4510	Open in IMG/M
3300024288\|Ga0179589_10126846	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1069	Open in IMG/M
3300026116\|Ga0207674_10999499	Not Available	806	Open in IMG/M
3300026296\|Ga0209235_1216136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300026298\|Ga0209236_1082772	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300026329\|Ga0209375_1261061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300026538\|Ga0209056_10034437	All Organisms → cellular organisms → Bacteria	4727	Open in IMG/M
3300027815\|Ga0209726_10038545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3535	Open in IMG/M
3300027875\|Ga0209283_10804860	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300028556\|Ga0265337_1014796	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2577	Open in IMG/M
3300031057\|Ga0170834_111525290	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300031231\|Ga0170824_113358783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300031234\|Ga0302325_12842835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	566	Open in IMG/M
3300031236\|Ga0302324_101883366	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300031525\|Ga0302326_10898866	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1260	Open in IMG/M
3300031576\|Ga0247727_10664909	Not Available	769	Open in IMG/M
3300031726\|Ga0302321_101761689	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	717	Open in IMG/M
3300031726\|Ga0302321_103644502	Not Available	501	Open in IMG/M
3300031834\|Ga0315290_11386095	Not Available	576	Open in IMG/M
3300031997\|Ga0315278_11699611	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300032401\|Ga0315275_12546126	Not Available	529	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.57%
Host-Associated	Host-Associated	5.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.29%
Aquatic	Environmental → Aquatic	16.28%
Plants	Host-Associated → Plants	5.43%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.64%
Freshwater	Environmental → Aquatic → Freshwater	6.98%
Sediment	Environmental → Aquatic → Sediment	6.98%
Peat	Environmental → Terrestrial → Peat	3.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.33%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.55%
Marine	Environmental → Aquatic → Marine	0.78%
Cave	Environmental → Terrestrial → Cave	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.98%
Lake	Environmental → Aquatic → Freshwater → Lake	3.10%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.88%
Loam	Environmental → Terrestrial → Soil → Loam	2.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.55%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.55%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.55%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.78%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.51%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.10%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.55%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.78%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.78%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	34.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.95%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.53%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.10%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.33%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.33%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.33%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.55%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.55%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.55%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.55%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.78%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.78%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.78%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009448	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Cold Creek Source	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300012160	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT630_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02912640	2088090014	Soil	MKTTLNTDGKIDIPDEIRQADHLNAGDSFELERLTAGHYLLTKQATNKVRVVISVGEDGLPLIRGENGVITSRLVKEIESQSL
JGIcombinedJ13530_1087764142	3300001213	Wetland	MRTTLNADGLIDIPQQIRDADHLAPGDAFELERLTPGHYLLAKQQPAGARFTVITGDDGLPLIRVASGVILSALVKEIESQTL*
C688J18823_104138912	3300001686	Soil	VKTTLNADGKIRIPEELCQTDKLATGDSFDLERLTPGQYLLTKAIPHAPRFSVSTGEDGLPVIRADNGIITAQLVKEIE
Ga0062594_1022593021	3300005093	Soil	MKTTLSTDGKIRIPDEIRKADHLSGGDSFELERLMSGHYLLTKQQPAGARFTVATGEDGLPVIRAENGVITSQRVKELESQTP*
Ga0066683_100906823	3300005172	Soil	KTTLNADGQIAIPQQIQDADQLAPGDLFELERVAPGHYFLSKQASAGERFTIVTGDDGLPVIRTTNGVITSRLVKEIETQTP*
Ga0066673_103449682	3300005175	Soil	MKTMLNADGKIGIPDEIRQTDHLAAGDSFELERLTPGHYLLMKQQPAGVRFTVATGEDGLPVIRTENGVITSRLVKELESQTL*
Ga0066685_102228733	3300005180	Soil	MKTTLNADGNIGIPAEIRETDHLTAGDSFELERLTPGHYLLTRQPPAGARIMVATAEDGLPVIRTENGTITSP*
Ga0066685_107986271	3300005180	Soil	MKTTLNADGQIAIPQQIQDADQLAPGDLFELERVAPGHYFLSKQASAGERFTIVTGDDGLPVIRTTNGVITSRLVKEIETQTP*
Ga0066675_105923952	3300005187	Soil	MKTTLNADGNIGISAEIRETDHLTAGDSFELERLTPGHYLLTRQPPAGARFTVATAEAGLPVIRTENGTITS
Ga0066388_1016225711	3300005332	Tropical Forest Soil	MKTTLDTDGKIDIPDEIRRADHLAAGDSFELERLTSGHYLLTKQPTRETRITVSVGKDG
Ga0066689_101675301	3300005447	Soil	ADHLAPGDSFEVERVAPGRYLVAKQAPGVERLTIATGDDGVPVIRTTDGVITSRLVKEIETQTP*
Ga0066682_103495923	3300005450	Soil	MKTTLNADGNIGIPAEIRETDHLTAGDSFELERLTPGHYLLTRQRPPGARFTVATAEDGLPVIRTENGTITSRMVKDIESQTA*
Ga0066695_105273402	3300005553	Soil	MKTTLNADGKIGIPAEIRETDHLTAGDSFELERLTPGHYLLTRQRPPGARFTVATAEDGLPVIRTENGTITSRMVKDIESQTA*
Ga0066698_104274611	3300005558	Soil	MKTTLNADGNIGIPAEIRETDHLTAGDSFELERLTPGHYLLTRQPPAGARIMVATAEDGLPVIRTENGTITS
Ga0066698_105254392	3300005558	Soil	MRTTLNADGNIGIPAEIRETDYLTASDSFELERLTPGHYLLTRQPPAGARFTVATTEDGLPVIRTENGTITSP*
Ga0066694_101549922	3300005574	Soil	MKTTLNADGKIGIPDEIRQTDHLAAGDSFELERLTPGHYLLMKQQPAGVRFTVATGEDGLPVIRTENGVITSRLVKELESQTL*
Ga0066691_101358914	3300005586	Soil	MKTMLNADGKIGIPDEIRQTDHLAAGDSFELERLTPGHYLLMKQQPAGARFTVATSEDGLPVIRTGNGVITSRLVKELESQTL*
Ga0074479_100048371	3300005829	Sediment (Intertidal)	MKTTLNADGKIGIPDEIRLTDHLSAGDSFELERLTPGHYLLTKQPPSGTRFTVATGVDGLPVIRAENGIITSRLVKDIESRTP*
Ga0074479_105343502	3300005829	Sediment (Intertidal)	MKTTLNADGLIDIPQQIRDADHLAPGDSFELERLTPGHYLLARQSRPGGSASFTIGTGDDGLPVIRVANGGISSRLVKEIESQTP*
Ga0068863_1013714551	3300005841	Switchgrass Rhizosphere	VKTTLNADGLIDIPKQIRDTDHLAPGDSFELQRLTSGHYLLAKRPATEPQFTIATGTDGLPVIKVTAGTITSPLVNEIESQ
Ga0068858_1013858222	3300005842	Switchgrass Rhizosphere	MKTTLGTDGKIRIPDEIRKADHLSGGDSFELERLMSGHYLLTKQQPAGARFTVATGEDGLPVIRAENGVITSQRVKELESQTP*
Ga0066658_108207111	3300006794	Soil	LLNAEGKISIPEELVQTDKLATGDSFELERLTPGQYLLTKEAPHASRFSISTGEDGLPVIRAENGTITSQLVKEIESQTK*
Ga0066665_108557731	3300006796	Soil	MKTTLNADGNIGIPAEIRETDHLTAGDSFELERLTPGHYLLTRQPPAGARIMVATAEDGLPVIRTENGTITSRMVKDIESQTP*
Ga0066665_116916981	3300006796	Soil	MKTTLNADGQIGIPQQIRDADHLAPGDSFELERLTPGHYLLAKQQPAGARFNLATADDGLPVIRVVNGAITGRLVKEIESQTP*
Ga0066659_112350532	3300006797	Soil	MKTTLNADGKIGIPDEIRQTDHLTAGDSFELERLTPGHYLLTKQRPPGGHFTVATGEDGLPVIRPENGVITSRLVKDIESQTP*
Ga0073928_100079334	3300006893	Iron-Sulfur Acid Spring	VKTTLNADGQIGIPPEIRQADQLAAGDSFELERLTPGHYLLAKQQGPSPSFVIAMGNDGLPVIRVNSGLITSQLVGEIEGQAP*
Ga0099795_100891082	3300007788	Vadose Zone Soil	MKTTLNTDGKIDIPNEIRQADQLNAGDSFELERLTAGHYLLTKQPTREARVVISVGKDGLPLIRGGNGLITSRLVKEIESQSL*
Ga0066710_1009258081	3300009012	Grasslands Soil	MRTTLNADGNIGIPAEIRETDYLTASDSFELERLTPGHYLLTRQPPAGARFTVATTEDGLPVIRTENGTITSP
Ga0066710_1022223471	3300009012	Grasslands Soil	MRTTLNADRLIGIPQQIRDADHLAPGDSFELERLTPGHYLLAKQPPTGGQFTIVTGDDGPPTIRVTNGTITSQLVKEIESRTP
Ga0099830_104703762	3300009088	Vadose Zone Soil	MKTTLNADGQIGIPQQIRDADHLAPGDSFELERLTPGHYLLAKQQPAGARFNLATADDGLPVIRVVNGAITSRLVKEIESQTP*
Ga0099828_115498812	3300009089	Vadose Zone Soil	MKTTLNADGQIGIPQQIRDADHLAPGDSFELERLTPGHYLLAKQQPAGARFNLVTADDGLPVIRVVNGAITSRLVKEIESQTP*
Ga0066709_1000205991	3300009137	Grasslands Soil	LNADGKIGIPAEIRETDHLTAGDSFELDRLTPGHYLLTRQRPPGARVTVATAEDGLPVIRTENGTITSRMVKDIESQTA*
Ga0066709_1001106364	3300009137	Grasslands Soil	MKTTLNADGQIAIPQQIQDADQLASGDLFELERLAPGHYFLSKQASAGERFTIVTGDDGLPVIRTTNGVITSRLVKEIETQTP*
Ga0066709_1022163502	3300009137	Grasslands Soil	PDEIRQAADLAAGDSFELERLTPGHYLLMKQQPAGARFTVATGEDGLPVIRTENGIITSRLVKLESQTL*
Ga0114129_117703911	3300009147	Populus Rhizosphere	MKTTLNANGLIAIPQQIQDADHLAPGDLFELERVAPGHYFLAKQPPAGERFTIASGDDGLPVIRTTNGVISARLVKEIETQTP*
Ga0114940_101757192	3300009448	Groundwater	MKTMLNADGRIGIPDEIRRTDHLAAGDSFELERVTPGHYLLTRQQPPGARCAVFTGQDGLPVIRTEGGMISSQLVKELESLPRSAARPSNTRLSD*
Ga0105340_11051062	3300009610	Soil	MKAVLDANGLIAIPTEIQAADHLAAGDSFDVERVAPGRYLLAKQAPAAERFTITTGNDGLPLIRTTNGVITSRLVKEIEAQTS*
Ga0134070_101896583	3300010301	Grasslands Soil	MKTTLNADGQIAIPQQIQDADQLAPGDLFELERVAPGHYFLSKQASAGERFTIVTGDDGLPVIRTTNGVITSRLVKEIETQT
Ga0134070_103219611	3300010301	Grasslands Soil	MKTTLNADGNIGIPAEIRETDHLTAGDSFELERLTPGHYLLTRQPRAGARIMVATAEDGLPVIRTENGTITSRMVKDIESQTP*
Ga0134088_103097732	3300010304	Grasslands Soil	GIPQQIRDADHLAPGDSFELERLTPGHYLLAKQPPTGGQFTIVTGDDGLPTIRVTHGTITSQLVKEIESRTP*
Ga0134088_104028181	3300010304	Grasslands Soil	MKTTLNADGNIGIPAEIRETDHLTAGESFELERLTPGHYLLTRQRPPGARFTVATAEDGLPVIRTENGTITSRIVKDIESQTP*
Ga0134084_102865061	3300010322	Grasslands Soil	MKTTLNADGNIGIPAEIRETDHLTAGDSFELERLTPGHYLLTRQRPPGARFTVATAEDGLPVIRTENGTITSRMVKDIESQTP*
Ga0134111_101160581	3300010329	Grasslands Soil	MKTTLNADGNIGIPAEIRETDHLSAGDSFELERLISGHYLLTRQPPPGARFTVATAEDGLPVIRTENCTIMSRMVKNIESQTP*
Ga0134111_105705731	3300010329	Grasslands Soil	MKTTLNADGQIAIPQQIQDADQLAPGDLFELERVAPGHYFLSKQASAGERFTIVTGDDGLPVIRTTNGVITSRLVKEIE
Ga0134080_105861882	3300010333	Grasslands Soil	IAIPQQIQDADQLAPGDLFELERVAPGHYFLSKQASAGERFTIVTGDDGLPVIRTTNGVITSRLVKEIETQTP*
Ga0134080_106080971	3300010333	Grasslands Soil	MKTTLNADGNIGIPAEIRETDHLSAGDSFELERLISGHYLLTRQPPPGARFTVATAEDGLPVIPTENGTITSRMVKNIESQTPCLSCST*
Ga0134071_101004543	3300010336	Grasslands Soil	MKTTLNADGKIGIPDEIRQTDHLTAGDSFELERLTPGHYLVTKQPRAGGRFTVTTGEDGLPVIRPENGVITSRLVKDTESQTP*
Ga0134062_104693492	3300010337	Grasslands Soil	MKTTLNADGKIGIPDEIRLTDHLTAGDSFELERLTPGHYLLTKQPPPGARFTVATGEDGLPDIRAENGVITSRLVKDIESQTP*
Ga0136847_118976782	3300010391	Freshwater Sediment	MKTTLSADGKIGIPDEIRQTDHLAAGDSFELERLTPGHYLLTRQQPPGARFTVATGGDGIPVIRTENGVITSRLVKDIESQTP*
Ga0134122_107963872	3300010400	Terrestrial Soil	VKTTLNADGKITIPDEILRSDRLTAGDSFELERVTSGHYLLTKEPALISRFSITTGTDGLPLIRTDRGTITATMVKDIEGQIP*
Ga0134122_132465292	3300010400	Terrestrial Soil	MKTTLTADGQISIPQQMRDADHLAPGDSFELERLTPGHYLLAKQQPDGARFTVATGDDGLPVVRVTNGVITSGLVKEIESQTP*
Ga0137436_10180732	3300011423	Soil	MKTTLNADGKIAIPDEIRRTDQLIAGDCFELERLIPGHYLLSKKTQSRGGFVVASGDDGLPVIRAENGVITSQLVKDIESQSA*
Ga0137349_10779162	3300012160	Soil	LNADGQISIPLEIRQADQLAPGDSFELERLTPGHYVLAKQQSPAARLSVDTGDDGLPVIRVENGVITSQLVKQIESQTP*
Ga0137388_104203982	3300012189	Vadose Zone Soil	MKTTLNADGQIGIPQQIRDADHLAPGDSFELERLTPGHYLLAKQQPAGARFNLATAEDGLPVIRVVNGAITSRLVKEIESQTP*
Ga0137383_100948245	3300012199	Vadose Zone Soil	MKTTLNADGQIAIPQQIQDADQLAPGDLFELERVAPGHYFLSKQASTGERFTIVTGDDGLPVIRTTNGVITSRLVKEIETQTP*
Ga0137383_108586652	3300012199	Vadose Zone Soil	MKTTLNADGNIGIPDEIRQTDNLNAGDSFELERLTPGHYLLTKQPPPGARFTVSTGEDGLPVIRAENGVITSRLVKDIESQTP*
Ga0137382_111636922	3300012200	Vadose Zone Soil	MKTTLNADGKIGIPDEIRQTDHLTAGDSFELERLTPGHYLLTKQPPPGARFTVVTGEDGLPVIRTENGAITSRLVKDIESQTP*
Ga0137365_101616183	3300012201	Vadose Zone Soil	MKTTLNADGNIGIPAEIRETDHLSAGDSFELERLISGHYLLTRQPPPGARFTVATAEDGLPVIPTENGTITSRMVKNIESQTP*
Ga0137399_104926011	3300012203	Vadose Zone Soil	MKTMLNTDGKIDIPNEIRQADQLNAGDSFELERLTAGHYLLTKQPTREARVVISVGKDGLPLIRGGNGLITSRLVKEIESQSL*
Ga0137362_102599542	3300012205	Vadose Zone Soil	MKTTLNADGKVGIPDQIRETDHLTAGDSFELERLNAGHYLLTKQPPPAVRFIVVTGEDGLPVIRAENGIITSGLVKAIESLVP*
Ga0137362_109611071	3300012205	Vadose Zone Soil	MKTTLNAEGQIGIPQQIRDADHLAPGDSFELERLTPGHYLLAKQQPAGARFDLATADDGLPVIRVVNGAITSRLVKEIESQTP*
Ga0137362_110521262	3300012205	Vadose Zone Soil	MKTTLNADGKIGIPDEIRQTDHLTAGDSFELERLTPGHYLLTKQPPPGARFTVATGEDGLPVIRPENGVITSRLVKEIERQTS*
Ga0137362_115424131	3300012205	Vadose Zone Soil	MKTTLNADGNIGIPAEILETDQLTVGDSFELDRLTSGHYLLTRQRPPGARFTVATAEDGLPVIRTENGTIKSRMVKDIESQTA*
Ga0137380_106522281	3300012206	Vadose Zone Soil	NAMKTTLNADGQIGIPQQIRDADHLAPGDSFELERLTPGHYLLAKQQPAGARFNLATADDGLPVIRVVNGTITSRLVKEIESQTP*
Ga0137380_109305192	3300012206	Vadose Zone Soil	MKTTLNADGKIGIPDEIRQTDHLTAGDSFELERLTPGHYLLTKQRPPGGRFTVASGEDGLPVIRPENGVITSRLVKDIESQTP*
Ga0137381_103447252	3300012207	Vadose Zone Soil	MKTTLNADGQIGIPQQIRDADHLAPGDSFELERLTPGHYLLAKQQPAGARFNLATADNGLPVIRVVNGAITSRLVKEIESQTP*
Ga0137381_114537782	3300012207	Vadose Zone Soil	MKTTLNADGQIGIPQQIRDADHLAPGDSFDLERLTPGHYLLAKQQPAGARFNLATADDGLPVIRVVNGAITSRLVKEIESQTP*
Ga0137379_1000224113	3300012209	Vadose Zone Soil	MKTTLNADGQIAIPQQVQDADQLAPGDLFELERVAPGHYFLSKQASAGERFTIVTGDDGLPVIRTTNGVITSRLVKEIETQTP*
Ga0137378_1000019513	3300012210	Vadose Zone Soil	MKTTLNADGQIAIPQQVQDADQLAPGDLFELERVAPGHYFLSKQASAGERFTIVTGDDGLPVIRTTNGVITLRLVKEIETQTP*
Ga0137377_110422442	3300012211	Vadose Zone Soil	MKTTLNADGKIGIPDEIRQTDHLTAGDSFELERLTPGHYLLTKQPSPGARFTVATGEDWLPVIRPENGVITSRLVKDIEGQTP*
Ga0137377_113790581	3300012211	Vadose Zone Soil	MKTTLNTDGKIDIPNEIRQADQLNAGDSFELERLTAGHYLLTKQPTREARVVISVGKDGLPLIRGGNGLITSRLVEEIESQSL*
Ga0137459_12339052	3300012228	Soil	MKTTLNADGKIAIPDEIRRTDQLIAGDCFELERLIPGHYLLSKKTQSRGGFVVASGDDGLPVIRAENGVITSQLVKDI
Ga0137370_103673032	3300012285	Vadose Zone Soil	MKTMLNADGKIGIPDEIRQTDHLAAGDSFELERLTPGHYLLMKQQPAGARFTVATGEDGLPVIRTENGVITSRLVKELESQTL*
Ga0137371_100514981	3300012356	Vadose Zone Soil	NADGNIGIPDEIRQTDNLNAGDSFELERLTPGHYLLTKQPPPGARFTVSTGEDGLPVIRAENGVITSRLVKDIESQTP*
Ga0137371_101902272	3300012356	Vadose Zone Soil	MKTTLNGEGNIGIPAEIRETDHLTAGDSFELERLTPGHYLLTRQRPPGARFTVATAEDGLPVIRTENGSITSRMVKDIESQTP*
Ga0137385_100811914	3300012359	Vadose Zone Soil	MKTTLNADGQIGIPQQIRDADHLAPGDSFEPERLTPGHYLLAKQQPAGARFNLATADDGLPVIRVVNGAITSRLVKEIESQTP*
Ga0137360_114530972	3300012361	Vadose Zone Soil	MKTTLNADGKIGIPDEIRQTDHLTAGDSFELERLTPGHYLLTKQPPPGARFTVATGEDGLPVIRPENGVIASRLVKDIESQTP*
Ga0137360_114971712	3300012361	Vadose Zone Soil	GLIDIPRQIRDADHLAPGDSFELERLTPGHYLLAKQPVPGAHFTIATGEDGLPVIRVASGVITSRFVKEIESQTP*
Ga0137361_104363083	3300012362	Vadose Zone Soil	MKTTLNADGQIGIPQQIRDADHLAPGDSFELERLTPGHYLLAKQQPAGARFNLATADDGLPVIRVVNGTITSRLVKEIESQTP*
Ga0137361_106490671	3300012362	Vadose Zone Soil	MKTTLNADGNIGIPAEIRETDHLTAGDSFELERLTPGHYLLTRQPPAGARFTVATAEDGLPVIRTENGTITSRLVKDIESQTP*
Ga0137361_106499191	3300012362	Vadose Zone Soil	MKTTLNADGKIGIPDEIRQTDHLTAGDSFELERLTPGHYLLTKQPPPGGRFTVATGEDGLTIIRPENGVITSRLVKDIESQTP*
Ga0137373_108284251	3300012532	Vadose Zone Soil	IGIPDEIRRTDHLAAGDSFELERLTPGHYLLTKQRPLGAHFTVATGDDGLPIIRTEKGAITSQLVKEIDSQTP*
Ga0137358_103511972	3300012582	Vadose Zone Soil	MKTTLNTDGKIDIPDEIRQADQLNAGDSFELERLTAGHYLLTKQPTREARVVISVGKDGLPLIRGGNGLITSRLVKEIESQSL*
Ga0137398_103362681	3300012683	Vadose Zone Soil	MKTTLNADGNIGIPAEILETDHLTVGDSFELERLTPGHYLLTRQRPPGARFTVATAEDGLPVIRTENGTIKSRMVKDIESQTA*
Ga0137394_100875894	3300012922	Vadose Zone Soil	MKTTLNADGLIDIPQQIRDADHLAPGDSFELERLTAGHYLLAKQPSAGGSFTVATEDDGLPVIRVSNGVIASRLVKEIESQTP*
Ga0137394_106196472	3300012922	Vadose Zone Soil	MKTTLNTDGKIDIPDEIRQADRLNAGDSFELERLTAGHYLLTKQPTREARVVISVGKDGLPLIRGGNGLITSRLVKEIESQSL*
Ga0137359_113046023	3300012923	Vadose Zone Soil	MKTILNADGKIGIPDEIRITDHLTAGDSFELERLTPGHYLLTKQPPPGGCFTVATGEDGLPVIRPENGVIASRLVKDIESQTP*
Ga0137419_103654623	3300012925	Vadose Zone Soil	MKTTLNTDGKIDIPNEILQADQLNAGDSFELKRLTTGHYLLTKQPTREAQIVISVGKDGLPLIRGGNGLITSRLVKEIESQSL*
Ga0137416_105935253	3300012927	Vadose Zone Soil	MKTTLNADGKIGIPDEIRQTDHLTAGDLFELERLTPGHYLLTKQPPPGARFTVATGEDGLPVIRPENGVITSRLVK
Ga0137404_102140792	3300012929	Vadose Zone Soil	MKTTLNADGKIGIPDEIRQTDHLTAGDSFELERLTPGHYLLTKQPPPGGRFTVATGEDGLPVIRVENGVITSRLDAQIM*
Ga0137410_112651902	3300012944	Vadose Zone Soil	MKTTLNADGKIGIPDEIRQTDHLTAGDSFELERLTPGHYLLTKQPPPGARFTVATGEDGLPVIRPENGVITSRLVKDIENQTP*
Ga0157374_128077692	3300013296	Miscanthus Rhizosphere	VVKTTLNADGKIRIPDEICQTDKLTTGDSFELERLTSGHYLLTKENSQAPRFSISTGEDGLPVIHAENGIITAQLVKEIEGQTP*
Ga0163163_102566853	3300014325	Switchgrass Rhizosphere	MKTTLTAGGQIGIPDEIQRTDHLAAGDSFELERLTPGHYLLTKQQPLGAQFTVVTGDDGLPVIRTERSSITSQLVKEIESQTR*
Ga0137412_101177802	3300015242	Vadose Zone Soil	VQIRQADQLNAGDSFELERLTAGHYLLTKQPTREARVVISVGKDGLPLIRGGNGLITSRLVKEIESQSL*
Ga0134085_102973212	3300015359	Grasslands Soil	MKTTLNADGNIGIPAEIRETDHLTAGDSFELERLAPGHYLLTRQPPAGARFTVATAEDGLPVIRTENGTITSRMVKDIESQTP*
Ga0134069_11423062	3300017654	Grasslands Soil	MKTTLNADGNIGIPAEIRETDHLTAGDSFELERLTPGHYLLTRQPPAGARIMVATAEDGLPVIRTENGTITSRMVKNIESQTP
Ga0187888_11923442	3300018008	Peatland	VKTTLDEDGQIGIPQQIREVDHLSPGDSFELERLTPGQYLLRKQPWLAEGGVFTIERADDGLPIIRVVRGCITSQLVKEIESQTS
Ga0187872_104024812	3300018017	Peatland	DHLCAGDAFNLVRLTPGHYLLSKHQEPAGHFTVAAGADGLPVIRVASGVITSEQVKYLESQTQSVHS
Ga0184637_101921521	3300018063	Groundwater Sediment	DEIRQSDHLAAGDSFELERLTPGHYLLTRQQPGGARFTVATGEDGIPVIRTQNGVITSRLVKDIESQTP
Ga0184637_103596582	3300018063	Groundwater Sediment	MKTTLSADGKIGIPDEIRQTDHLAAGDAFELERLTPGHYLLTRQQPPGARFTVATGEDGIPVIRAENGVITSRLVKDIESQTP
Ga0184627_100993804	3300018079	Groundwater Sediment	MKTTLSADGKIGIPDEIRQSDHLAAGDSFELERLTPGHYLLTRQQPGGARFTVATGEDGIPVIRAENGVITSRLVKDIESQTP
Ga0066667_103758162	3300018433	Grasslands Soil	MKTMLNADGKIGIPDEIRQADDLAAGDSFELERLTPGHYLLMKQQPAGARFTVATGEDGLPVIRTENGVITSRLVKELESQTL
Ga0066667_117557241	3300018433	Grasslands Soil	LTSKGVNESMKTTLGADGQIGIPQQIRDADHLAPGDAFELERVTPGHYLLAKLPPSRRPFAVVVGEDGLPLIRVSEGVITSQLVGEIESQTP
Ga0066662_128140731	3300018468	Grasslands Soil	MKTTLNADGKIGIPDEIRQTDHRTAGDSFELERLTPGHYLLTKQPPPGARFTVATAEDGLPVIRPANGVITSRLAKAFENQTP
Ga0190271_125189232	3300018481	Soil	MKTTLNADGKIGIPDEIRQSDHLSAGDSFELQRLTPGHYLLTKEQLASARFTVVTGEDGLPVIRGENGVITSRLVKEIESQTP
Ga0066669_101653312	3300018482	Grasslands Soil	MKTTLNADGNIGISAEIRETDHLTAGDSFELERLTPGHYLLTRQPPAGARIMVATAEAGLPVIRTENGTITSRMVKDSFLTPF
Ga0179590_11235171	3300020140	Vadose Zone Soil	MKTTLNTDGKIDIPDEIRQADRLNAGDSFELERLTAGHYLLTKQPTREARVVISVGKDGLPLIRGGNGL
Ga0210382_103539391	3300021080	Groundwater Sediment	MKTTLNADGNIDIPAEIRETDHLTAGDSSELERLTPGHYLLTRQPPSDARFTVATAEDGLPVIRTENGTITSRMVKDIESQTP
Ga0212123_100403654	3300022557	Iron-Sulfur Acid Spring	VKTTLNADGQIGIPPEIRQADQLAAGDSFELERLTPGHYLLAKQQGPSPSFVIAMGNDGLPVIRVNSGLITSQLVGEIEGQAP
Ga0179589_101268461	3300024288	Vadose Zone Soil	MKTTLNTDGKIDIPDEIRQADRLNAGDSFELERLTAGHYLLTKQPTREARVVISVGKDGLPLIRGGNGLITS
Ga0207674_109994992	3300026116	Corn Rhizosphere	MKTTLSTDGKIRIPDEIRKADHLSGGDSFELERLMSGHYLLTKQQPAGARFTVATGEDGLPVIRAENGVITSQRVKELESQTP
Ga0209235_12161361	3300026296	Grasslands Soil	MKTMLNADGKIGIPDEIRQTDNLAAGDSFELERLTPGHYLLMKQQPAGARFTVATGEDGLPVIRTENGVITSRLVKELESQTL
Ga0209236_10827724	3300026298	Grasslands Soil	MKTTLNADGQIAIPQQIQDADQLAPGDLFELERVAPGHYFLSKQASAGERFTIVTGDDGLPVIRTTNGVITSRLVKEIETQTP
Ga0209375_12610612	3300026329	Soil	NNMKTTLNADGQIAIPQQIQDADQLAPGDLFELERVAPGHYFLSKQASAGERFTIVTGDDGLPVIRTTNGVITSRLVKEI
Ga0209056_100344371	3300026538	Soil	MKTTLNADGNIGIPAEIRETDHLTAGDSFELERLTPGHYLLTRQPPAGARIMVATAEDGLPVIRTENGTITSRMVKDIESQTP
Ga0209726_100385455	3300027815	Groundwater	MKTTLNADGQIGIPQEIRDTDHLAVGDSFDLERLASGHYVLAKQSRTTRNIRFAVVTGTDGLPVIRVANGTISSELVKEIESRTA
Ga0209283_108048602	3300027875	Vadose Zone Soil	MKTTLNADGQIGIPQQIRDADHLAPGDSFELERLTPGHYLLAKQQPAGARFNLVTADDGLPVIRVVNGAITSRLVKEIESQTP
Ga0265337_10147965	3300028556	Rhizosphere	VSKLWLVKTGQKEYKNTMKTTLDAGGQICIPDEIRSTDHLAAGDSFELERLTPGHYLLTKQQSAGAHFTVAEGEDGLPVIRTENGVITSQLVKELESQTQ
Ga0170834_1115252902	3300031057	Forest Soil	VKTTLNSDGRIDIPNEIRQADHLAAGDSFELERLTPGHYLLTKQPAHDAHITVSGGEDGLPLIRASNGVITSRFVKDIG
Ga0170824_1133587831	3300031231	Forest Soil	VKTTLNAGGQIGIPDEIRRTDHLATGDSFELERLTPGHYLLTKQQSVVAHFTVVTGDDGLPVIRTEKGTITSQLVKEIESQTP
Ga0302325_128428352	3300031234	Palsa	MKTMLDEEGQIGIPQQIRDMDHLAPGDSFELERLTPGRYLLRRHLPPAEVARFTVARADDGLPVICVVDGHITSRLVKEIESQTP
Ga0302324_1018833661	3300031236	Palsa	MKTTMGEEGQIGIPQQIRDMDHLAPGDSFELERLTPGRYLLRRHLPPAEVARFTVARADDGLPVICVVDGHITSRLVKEIESQTP
Ga0302326_108988661	3300031525	Palsa	MSKVNAMKTMLDEEGQIGIPQQIRDMDHLAPGDSFELERLTPGRYLLRRQPPSSEGARFTVARADDGLPVIRVVEGHITSRMVKEIESQTP
Ga0247727_106649092	3300031576	Biofilm	MKTTLNSDGKIGIPDEIRQTDHLTAGDSFELERLTPGHYLLTKHQPSSARFIVATGEDGLPVIRVENGAITSRLVKDIESQTP
Ga0302321_1017616891	3300031726	Fen	MKTTLDADGQIGIPKQVRDADHLNAGDSFELERLTPGHYLLAKQQCAVPRFVVVGGDDGLPTIRTTNGLITSRLVKEIESQSP
Ga0302321_1036445022	3300031726	Fen	MKTALNANGLIDIPQQIRDVDHLAPGDSFELERLTAGHYLLTKQPPSGGQFSVVTGGDGLPIIRVTNGTITSQIVKEIESRTP
Ga0315290_113860951	3300031834	Sediment	MKTTLTTDGLIGIPPEIRQADHLAPGDSFELERLKPGHYLLAKQQAAGARFTVVEGDDGLPLIRVTDGVITARLVKEIESQMP
Ga0315278_116996112	3300031997	Sediment	TMKTTLTTDGLIGIPPEIRQADHLAPGDSFELERLKPGHYLLAKQQAAGARFTVVEGDDGLPLIRVTDGVITARLVKEIESQMP
Ga0315275_125461261	3300032401	Sediment	MKTTLTADGLIVIPPEVRQADHLAPGDSFELERLTPGHYLLAKQQPPGARFTVVEGDDGLPLVRVANGVITSRLVKEIESQAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063530

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences