NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F063528

Metagenome Family F063528

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F063528
Family Type Metagenome
Number of Sequences 129
Average Sequence Length 61 residues
Representative Sequence MAQGKPVMRQQSKPRKKAKPLKPPERSGLFPVVTSNLLNMICVTTVFATVLAVLLGVAKW
Number of Associated Samples 102
Number of Associated Scaffolds 129

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 72.22 %
% of genes near scaffold ends (potentially truncated) 24.81 %
% of genes from short scaffolds (< 2000 bps) 81.40 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (56.589 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(53.488 % of family members)
Environment Ontology (ENVO) Unclassified
(54.264 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(53.488 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 32.95%    β-sheet: 0.00%    Coil/Unstructured: 67.05%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 129 Family Scaffolds
PF16518GrlR 25.58
PF08401ArdcN 1.55
PF03413PepSY 1.55
PF04851ResIII 1.55
PF13378MR_MLE_C 1.55
PF10503Esterase_PHB 0.78
PF04392ABC_sub_bind 0.78
PF01609DDE_Tnp_1 0.78
PF14337Abi_alpha 0.78
PF13304AAA_21 0.78
PF14338Mrr_N 0.78
PF02384N6_Mtase 0.78
PF01936NYN 0.78
PF06114Peptidase_M78 0.78
PF02738MoCoBD_1 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 129 Family Scaffolds
COG4227Antirestriction protein ArdCReplication, recombination and repair [L] 1.55
COG1432NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturationGeneral function prediction only [R] 0.78
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.78
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.78
COG3293TransposaseMobilome: prophages, transposons [X] 0.78
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.78
COG5421TransposaseMobilome: prophages, transposons [X] 0.78
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.78
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.78


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms56.59 %
UnclassifiedrootN/A43.41 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001545|JGI12630J15595_10013799All Organisms → cellular organisms → Bacteria → Proteobacteria1737Open in IMG/M
3300001661|JGI12053J15887_10020756All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae3676Open in IMG/M
3300001661|JGI12053J15887_10266924All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2845Open in IMG/M
3300001661|JGI12053J15887_10345335All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium721Open in IMG/M
3300001661|JGI12053J15887_10586515All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae530Open in IMG/M
3300002245|JGIcombinedJ26739_100016548All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium6213Open in IMG/M
3300002245|JGIcombinedJ26739_100144129All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2251Open in IMG/M
3300002886|JGI25612J43240_1032174All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium765Open in IMG/M
3300002907|JGI25613J43889_10045426All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1242Open in IMG/M
3300003369|JGI24140J50213_10167061All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium696Open in IMG/M
3300004082|Ga0062384_101272549All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae537Open in IMG/M
3300005947|Ga0066794_10225460Not Available563Open in IMG/M
3300005952|Ga0080026_10019335All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1649Open in IMG/M
3300005993|Ga0080027_10476252Not Available506Open in IMG/M
3300005994|Ga0066789_10131598All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia1067Open in IMG/M
3300006050|Ga0075028_100059876Not Available1855Open in IMG/M
3300006795|Ga0075520_1100293All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1314Open in IMG/M
3300007258|Ga0099793_10284595All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae801Open in IMG/M
3300007258|Ga0099793_10456735Not Available632Open in IMG/M
3300007265|Ga0099794_10170748All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1108Open in IMG/M
3300007788|Ga0099795_10184395Not Available873Open in IMG/M
3300007819|Ga0104322_112937All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1145Open in IMG/M
3300007819|Ga0104322_120202Not Available1270Open in IMG/M
3300009038|Ga0099829_10209739Not Available1579Open in IMG/M
3300009038|Ga0099829_10723594Not Available827Open in IMG/M
3300009088|Ga0099830_10693434All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium838Open in IMG/M
3300009089|Ga0099828_11442335All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae608Open in IMG/M
3300009090|Ga0099827_11117799Not Available684Open in IMG/M
3300009143|Ga0099792_10472841Not Available780Open in IMG/M
3300010159|Ga0099796_10080309All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1195Open in IMG/M
3300010159|Ga0099796_10510237Not Available539Open in IMG/M
3300011269|Ga0137392_10580269Not Available931Open in IMG/M
3300011270|Ga0137391_11223157Not Available599Open in IMG/M
3300011271|Ga0137393_11109292Not Available672Open in IMG/M
3300012096|Ga0137389_10434870Not Available1123Open in IMG/M
3300012189|Ga0137388_10157828All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2015Open in IMG/M
3300012189|Ga0137388_11862305Not Available532Open in IMG/M
3300012198|Ga0137364_10070234All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2394Open in IMG/M
3300012198|Ga0137364_10588994Not Available838Open in IMG/M
3300012199|Ga0137383_10260262All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1271Open in IMG/M
3300012200|Ga0137382_10109187Not Available1835Open in IMG/M
3300012202|Ga0137363_10061085All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2738Open in IMG/M
3300012202|Ga0137363_10169546All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1730Open in IMG/M
3300012203|Ga0137399_10036484All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei3447Open in IMG/M
3300012203|Ga0137399_10194076All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1645Open in IMG/M
3300012206|Ga0137380_10356655All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1304Open in IMG/M
3300012206|Ga0137380_11487753Not Available562Open in IMG/M
3300012211|Ga0137377_10712185All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. S69938Open in IMG/M
3300012285|Ga0137370_10176561All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1245Open in IMG/M
3300012351|Ga0137386_10486722All Organisms → cellular organisms → Bacteria → Proteobacteria889Open in IMG/M
3300012357|Ga0137384_10938293All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei697Open in IMG/M
3300012359|Ga0137385_11266511Not Available600Open in IMG/M
3300012361|Ga0137360_10275749All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1389Open in IMG/M
3300012362|Ga0137361_10905596Not Available800Open in IMG/M
3300012363|Ga0137390_10885270Not Available848Open in IMG/M
3300012683|Ga0137398_10056267All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2350Open in IMG/M
3300012683|Ga0137398_10098569All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. UNPA3241834Open in IMG/M
3300012683|Ga0137398_10763678Not Available674Open in IMG/M
3300012683|Ga0137398_10788665Not Available663Open in IMG/M
3300012685|Ga0137397_10164188All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1647Open in IMG/M
3300012685|Ga0137397_11100833Not Available579Open in IMG/M
3300012917|Ga0137395_10155126All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1570Open in IMG/M
3300012918|Ga0137396_10539110Not Available864Open in IMG/M
3300012922|Ga0137394_10259080All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1487Open in IMG/M
3300012922|Ga0137394_10355676Not Available1250Open in IMG/M
3300012923|Ga0137359_11486125Not Available565Open in IMG/M
3300012924|Ga0137413_10477406Not Available913Open in IMG/M
3300012925|Ga0137419_11017308All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.687Open in IMG/M
3300012925|Ga0137419_11357863All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. S69599Open in IMG/M
3300012927|Ga0137416_10629331All Organisms → cellular organisms → Bacteria937Open in IMG/M
3300012927|Ga0137416_11638825Not Available586Open in IMG/M
3300012929|Ga0137404_11246641Not Available684Open in IMG/M
3300012930|Ga0137407_10559445Not Available1071Open in IMG/M
3300012944|Ga0137410_10222225All Organisms → cellular organisms → Bacteria1470Open in IMG/M
3300015241|Ga0137418_10046510All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3994Open in IMG/M
3300015242|Ga0137412_10322602All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1207Open in IMG/M
3300018000|Ga0184604_10101390Not Available892Open in IMG/M
3300018028|Ga0184608_10074366All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. S691382Open in IMG/M
3300019789|Ga0137408_1256588All Organisms → cellular organisms → Bacteria → Proteobacteria710Open in IMG/M
3300019789|Ga0137408_1286561All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria11769Open in IMG/M
3300019789|Ga0137408_1328629Not Available999Open in IMG/M
3300019867|Ga0193704_1040024All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium935Open in IMG/M
3300019874|Ga0193744_1006804All Organisms → cellular organisms → Bacteria → Proteobacteria2093Open in IMG/M
3300019878|Ga0193715_1005412All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2740Open in IMG/M
3300019886|Ga0193727_1003587All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales6443Open in IMG/M
3300019887|Ga0193729_1001024All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria14442Open in IMG/M
3300019890|Ga0193728_1174579Not Available925Open in IMG/M
3300020021|Ga0193726_1163884Not Available959Open in IMG/M
3300020170|Ga0179594_10217979Not Available717Open in IMG/M
3300020199|Ga0179592_10171567Not Available988Open in IMG/M
3300021080|Ga0210382_10253171All Organisms → cellular organisms → Bacteria → Proteobacteria771Open in IMG/M
3300021086|Ga0179596_10178382Not Available1025Open in IMG/M
3300021086|Ga0179596_10326494All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium768Open in IMG/M
3300021170|Ga0210400_10086245Not Available2473Open in IMG/M
3300021171|Ga0210405_11081341Not Available601Open in IMG/M
3300022694|Ga0222623_10120773All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1020Open in IMG/M
3300025650|Ga0209385_1123560All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae804Open in IMG/M
3300026281|Ga0209863_10008914All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3226Open in IMG/M
3300026285|Ga0209438_1003948All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae5033Open in IMG/M
3300026285|Ga0209438_1054134Not Available1323Open in IMG/M
3300026291|Ga0209890_10265659Not Available528Open in IMG/M
3300026319|Ga0209647_1293252Not Available546Open in IMG/M
3300026320|Ga0209131_1005030All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae8662Open in IMG/M
3300026358|Ga0257166_1033930Not Available703Open in IMG/M
3300026361|Ga0257176_1064291All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium588Open in IMG/M
3300026361|Ga0257176_1068912Not Available570Open in IMG/M
3300026482|Ga0257172_1111224All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium504Open in IMG/M
3300026551|Ga0209648_10113525All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2199Open in IMG/M
3300027181|Ga0208997_1004238All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1757Open in IMG/M
3300027381|Ga0208983_1035197Not Available979Open in IMG/M
3300027383|Ga0209213_1003699All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2607Open in IMG/M
3300027546|Ga0208984_1111481All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium591Open in IMG/M
3300027603|Ga0209331_1017230All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. BH31872Open in IMG/M
3300027616|Ga0209106_1090813Not Available685Open in IMG/M
3300027643|Ga0209076_1189329All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae567Open in IMG/M
3300027651|Ga0209217_1029236All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1732Open in IMG/M
3300027846|Ga0209180_10071375All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1948Open in IMG/M
3300027846|Ga0209180_10157796Not Available1308Open in IMG/M
3300027862|Ga0209701_10008055All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium6886Open in IMG/M
3300027910|Ga0209583_10038831Not Available1624Open in IMG/M
3300028047|Ga0209526_10243881All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1231Open in IMG/M
3300028047|Ga0209526_10271582Not Available1154Open in IMG/M
3300028536|Ga0137415_10864679Not Available714Open in IMG/M
3300028792|Ga0307504_10060184All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1112Open in IMG/M
3300028796|Ga0307287_10253129All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. S69667Open in IMG/M
3300028828|Ga0307312_10664722Not Available690Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil53.49%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil12.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.20%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.43%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil2.33%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil2.33%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.55%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.55%
Permafrost SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Permafrost Soil1.55%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil1.55%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.78%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.78%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.78%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.78%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.78%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002886Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cmEnvironmentalOpen in IMG/M
3300002907Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cmEnvironmentalOpen in IMG/M
3300003369Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22AEnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300005947Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190EnvironmentalOpen in IMG/M
3300005952Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045EnvironmentalOpen in IMG/M
3300005993Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006795Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-BEnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300007819Permafrost core soil microbial communities from Svalbard, Norway - sample 2-1-2 SoapdenovoEnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019867Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1EnvironmentalOpen in IMG/M
3300019874Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025650Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)EnvironmentalOpen in IMG/M
3300026281Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)EnvironmentalOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026291Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026358Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-BEnvironmentalOpen in IMG/M
3300026361Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-BEnvironmentalOpen in IMG/M
3300026482Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-BEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027181Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027381Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027383Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027546Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027603Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12630J15595_1001379913300001545Forest SoilSRVSEPVAQLTGITMAQRKPTMQQQGKPRKNVRPLNALEGSRFVSVVTSNPLNMTCVTTAFATVLAVLLGVAKWT*
JGI12053J15887_1002075623300001661Forest SoilMAQREPVMRQQSKPRKKAKPLKAPERSGFLPVVTSNVLNMICVTTVVATVLAVLLGVAKWT*
JGI12053J15887_1026692433300001661Forest SoilMAQGKPVMRHQSKARKNAKPLKAPXRSGFFPVVTSNLLNMICVTTVFATVLAVLLGVAKWT*
JGI12053J15887_1034533523300001661Forest SoilMAQRDPVMRQQSKPRKKAKPLKAPERSGFFPVVTSNLLNMICVTTVFATVLAVLLGAAKWT*
JGI12053J15887_1058651523300001661Forest SoilMAQGKPVMRHQTKARKNAKPLKAPGRSGFFPVVTSNLLNMICVTTVFATVLAVLLGIAKWT*
JGIcombinedJ26739_10001654883300002245Forest SoilLTGITMAQRKPTMQQQGKPRKNVRPLNALEGSRFVSVVTSNPLNMTCVTTAFATVLAVLLGVAKWT*
JGIcombinedJ26739_10014412943300002245Forest SoilMAQRKPTMQQQGKPRKNVRPLNALEGSRFVSVVTSNPLNMTCVTTAFATVLAVLLGVAKWT*
JGI25612J43240_103217433300002886Grasslands SoilVPGQLAYRENMAQRKPVTRQPRKRRKKAKPLKAPERSGFFPVVTSTLLXXICTTTVFATVLAVLLGIAKWA*
JGI25613J43889_1004542643300002907Grasslands SoilPREGSRRAQALGVPGQLAYRENMAQRKPVTRQPRKRRKKAKPLKAPERSGFFPVVTSTLLSIICTTTVFATVLAVLLGIAKWA*
JGI24140J50213_1016706123300003369Arctic Peat SoilMRQQSKPRKTVKPLKAPAASSTFPFVKSTLLNMICVTIAFATVLAVLLGVAKWA*
Ga0062384_10127254923300004082Bog Forest SoilMTRRKPAMRQQSKSRETVKALKASERSGLFLLVTSNLLNMICVTIAFATVLAVLFGVAKWA*
Ga0066794_1022546013300005947SoilSKCLSPSLTGITMAQRKPVMRQQSKPRKNVKPLKAPERSGFFPVVTSNLLNLICMTTAFATVLAVLLGVAKWT*
Ga0080026_1001933553300005952Permafrost SoilMAQREPVMRQPGKPRKKAKPLKAPERSGFFPVVTSNVLNMICVTTVVATVLAVLLGVAKWT*
Ga0080027_1047625223300005993Prmafrost SoilMRQQSKPRKRAKPLKAPERSGFFPIVTSNVQNMICVTTVATVLAVLLGFAKWA*
Ga0066789_1013159823300005994SoilVAQRKPVMRQQSKPRTKAKPLKPPERSGFFPVVTSNLLNMICVTTVFATVLAVLLGVAKWV*
Ga0075028_10005987623300006050WatershedsMAQGKPVMRQQSKPRKKAKPLKPPERSGLFPVVTSNLLNMICVTTVFATVLAVLLGVAKWA*
Ga0075520_110029333300006795Arctic Peat SoilMAQRQPVVRQPSKPRKKAKPLKAPERSGFFPVVTSNLLNMICVTTVFATVLTVLLGVAKCT*
Ga0099793_1028459513300007258Vadose Zone SoilMAQGKPVMRQQSKPRKKAKPLNPPERSGLFPVVTSNLLNMICVITVFASVLAVLLGVAKWT*
Ga0099793_1045673513300007258Vadose Zone SoilMAQREPVMRQQSKPRKKAKPLKAPERSGFFPVVTSNVLNMICVTTVVATVLAVLLGVAKWT*
Ga0099794_1017074823300007265Vadose Zone SoilMAQRKPVMRQQSKPRNNTKPLKAPERSGFFPVVTSNILNMICVTTVFASVLAVLLGVAKWT*
Ga0099795_1018439513300007788Vadose Zone SoilMAQREPVMRQQSKPRKKAKPLKASEPSGLFPVVTSNLLNMICVTTVFATVLAVLLGVAKWT*
Ga0104322_11293743300007819Permafrost SoilMAQRKPVTRQQSKPRKRAKPLKAPERSGFFPAVKSNLLNMICVTIAFATVLAMLFGVAKWA*
Ga0104322_12020223300007819Permafrost SoilMAHRKPVTRQQSKPRKRAKPLKAPERSGFFPVVKSNLLNMIFVTTAFATVLAMLFGVAKWA*
Ga0099829_1020973923300009038Vadose Zone SoilMAQREPVMRQQSKPRKKAKPLKAPERSGLFPVVTSNLLNMICVTTVFATVLAVLLGIAKWA*
Ga0099829_1072359423300009038Vadose Zone SoilMAQREPVMRQQSKPRKKAKPLKAPERSRFFPVVTSNVLNMICVTTVVATVLAVLLGVAKWT*
Ga0099830_1069343423300009088Vadose Zone SoilMAQREPVMRRQSKPHKKAKPLKASERSGLFPVVTSNLLNMICVTTVVATVLAVLLGVAKWT*
Ga0099828_1144233523300009089Vadose Zone SoilMAQREPVMRQQSKPRKKAKPLKAPERSGFFPIVTSNVLNMICVTTVVATVLAVLLGVAKWT*
Ga0099827_1111779923300009090Vadose Zone SoilMAQGKPVMRQQSKPRKKAKPLKPPERSGLFPVVTSNLLNMICVTTVFASVLAVLGVAKWT
Ga0099792_1047284123300009143Vadose Zone SoilMGPSLTGITMAQREPVMRQQSKPRKKAKPLKAPERSGFLPVVTSNVLNMICVTTVVATVLAVLLGVAKWT*
Ga0099796_1008030923300010159Vadose Zone SoilMAQREPVMRQQSKPRKKAKPLKVPERSGFFPIVTSNVLNMICVTTVVATVLAVLLGGARWT*
Ga0099796_1051023723300010159Vadose Zone SoilITMAQRKPVMRQQSKPRKKAKPLKAPERSGFLPVVTSNVLNMICVTTVVATVLAVLLGVAKWT*
Ga0137392_1058026923300011269Vadose Zone SoilMAQGKPVMRQQSKPRKKAKPLNPPERSGLFPVVTSNLLNMICVTTVFASVLAVLLGVAKWT*
Ga0137391_1122315713300011270Vadose Zone SoilMPLQAWPALAETTMAQGKPVMRQQSKPRKNAKQLKSAERSGLFPVVTSNLLNMICVTTVFATVLAV
Ga0137393_1110929223300011271Vadose Zone SoilMRQQSKPRKKAKPLNPPERSGLFPVVTSNLLNMICVITVFASVLAVLLGVAKWT*
Ga0137389_1043487013300012096Vadose Zone SoilMAQGKPAMRQQSKPRKKAKPLKPPERSGLFPVVTSNLLNMICVTTVFASVLAVLLGVAKWT*
Ga0137388_1015782843300012189Vadose Zone SoilMAQGKQVMRHQSKARKNAKPLKAPERSGFFPVVTSNLLNMICVTTVFATVLVVLLGVAKWT*
Ga0137388_1186230513300012189Vadose Zone SoilQSKPSKKAKPLKAPERSGFFPVVTSTLLDIICTTTVFATVLAVLLGIAKWA*
Ga0137364_1007023423300012198Vadose Zone SoilMAQREPVMRQQSKPRKKAKPLKASERSGLFPVVTSNLLNMICVTTVLVTVLAVLLGFAKWA*
Ga0137364_1058899433300012198Vadose Zone SoilMAQREPVMRQQSKPRKKAKLAKASERSGLLPVVTSNLLNMTCVTTVFATVLAVLLG
Ga0137383_1026026223300012199Vadose Zone SoilMAQGKPVMRHQSKARKNAKPLKAPERSGFFPVVTSNLLNMICVTTVFATVLAVLLGVAKWT*
Ga0137382_1010918743300012200Vadose Zone SoilMAQREPVMRQQSKPRKKTKPLKPSERSGLFPVVTSNLLNMICVTTVLVTVLAVLLGFAKWA*
Ga0137363_1006108533300012202Vadose Zone SoilMAQREPVMRQQSKPGKKAKPLKAPERSGFFPIVTSNVLNMICVTTVVATVLAVLLGVAKWT*
Ga0137363_1016954643300012202Vadose Zone SoilMAQRKPAMRQQSKPRKNAKSLKAAERSGLFPVVTSNLLNMICVTTIFATVLAVLLGVAKWT*
Ga0137399_1003648423300012203Vadose Zone SoilMAQREPVMRQQSKPRNKAKPLKASERSGLFPVVTSNLLNMICVTTVFATVLAVLLGVAKWT*
Ga0137399_1019407623300012203Vadose Zone SoilMAQGKPVMRQQSKPRKKAKPLNPPERSGLFPVVTSNLLNMICVITVFASVLAVLLGVAKWS*
Ga0137380_1035665513300012206Vadose Zone SoilMAQGKQVMRLQSKARKNAEPLKAPERSGFFPVVTSNLLNMICVTTVFATVLAVLLGVAKWT*
Ga0137380_1148775313300012206Vadose Zone SoilMAQRNPVMREQSEPRKKAKPLKASERSGLFPVVTSNLLNMICMTSVFATVLAVLLGVAKWT*
Ga0137377_1071218523300012211Vadose Zone SoilHQSKARKNAKPLKAPERSEFFPVVTSILLNIICVTTVFATVLAVLLGVAKWT*
Ga0137370_1017656123300012285Vadose Zone SoilMAQREPVMRQQSKPRKKAKPLKASERSGLFLVVTSNLLNMICVTTVLVTVLAVLLGFAKWA*
Ga0137386_1048672223300012351Vadose Zone SoilMAQRKPVMREQSEPRKKAKPLKASERSGLFPVVTSNLLNMICVTTVLVTVLAVLLGFAKWA*
Ga0137384_1093829323300012357Vadose Zone SoilMAQGKPVMRHQSKARKNAEPLKAPERSGFFPVVTSNLLNMICVTTVFATVLAVLLGVAKWT*
Ga0137385_1126651113300012359Vadose Zone SoilMPQRKPVMRQQSKPRQKAKPLKASERSGLFPVVTSNLLNMTCVTTVFATVLAILLGVAKWS*
Ga0137360_1027574923300012361Vadose Zone SoilMAQREPVMRQQSKARKKAKPLKASERSGLFPVVTSNLLNMICVTTIFATVLAVLLGVAKWT*
Ga0137361_1090559623300012362Vadose Zone SoilMPEPSLTGITMAQGKPVMRQQSKPRKKAKPLKTSERSGLFPVVTSNLLNMICVTTVFATVLAVLLGVAKWA*
Ga0137390_1088527013300012363Vadose Zone SoilMAQRELVMRQQSKPRKKAKPLKAPERSGFFPVVTSNVLNMICVTTVVATVLAVLL
Ga0137398_1005626763300012683Vadose Zone SoilVKRRKKAKPLKAPERSGFFPVVTSTLLDIICTTTVFATVLAVLLGIAKWA*
Ga0137398_1009856913300012683Vadose Zone SoilKPRKKAKPLKAPERSGFFPVVTSNVLNMICVTTVVATVLAVLLGVAKWT*
Ga0137398_1076367823300012683Vadose Zone SoilMPEPSLTGITMAQGKPVMRQQSKPRKNAKSLKAAERSGLFPVVTSNLLNMICVTTIFATVLAVLLGVAKWT*
Ga0137398_1078866513300012683Vadose Zone SoilMAQREPVMRQHSKPRKKAKPLKAPERSGFLPVVTSNVLNMICVTTVVATVLAVLLGVAKWT*
Ga0137397_1016418813300012685Vadose Zone SoilMAQGKPVMRQQSKPRKNAKQLKSAERSGLFPVVTSNLLNMICVTTVFAMVLAVLLGVAKWT*
Ga0137397_1110083313300012685Vadose Zone SoilMAQREPVMRQQSKPRKKAKPLKAPERSGFFPIVTSNVLNMICVTTVVATVFAVLLGVAK
Ga0137395_1015512613300012917Vadose Zone SoilMAQREPVMRQQSKTGKKAKPLKAPERSGFFPIVTSNVLNMICVTTVVATVLAVLLGVAKWT*
Ga0137396_1053911013300012918Vadose Zone SoilSKCLSPSLTGITMAQGKPVMRQQSKPRKKAKPLKPPERSGLFPVVTSNLLNMICVTTVFATVLAVLLGVAKWT*
Ga0137394_1025908013300012922Vadose Zone SoilMAQGKPVMRHQSKARKNAKPLKAPERSGFFPVVTSNLLNMICVTTVFATVLAVLLGAAKWT*
Ga0137394_1035567623300012922Vadose Zone SoilMAQREPVMRQQSKPRKKAKPLKAPERSGFFPIVTSNVLNMICVTTVVATVFAVLLGVAKWT*
Ga0137359_1148612513300012923Vadose Zone SoilMAQREPVMQRQSKPRKKAKPLKTSERSGLFPVVTSNLLNMICVTTVFATVLAVLLGVAKWT*
Ga0137413_1047740623300012924Vadose Zone SoilMAQREPVMRQQSKPRKKAKPLKAPERSGFFPVVTSNVLNMICVMTVVATVLAVLLGVAKWT*
Ga0137419_1101730813300012925Vadose Zone SoilREPVMRQQSKPRKKAKPLKAPERSGFFPVVTSTLLDIICTTTVFATVLAVLLGIAKWA*
Ga0137419_1135786313300012925Vadose Zone SoilPVMRHQSKARKNAKPLKAPERSGFFPVVTSNLLNMICVTTVFATVLAVLLGVAKWT*
Ga0137416_1062933123300012927Vadose Zone SoilMAQREPVMRQQSKARKKAKPLKASERSGLFPVVTSNLLNMIRVTTVFATVLAVLLGVAKWT*
Ga0137416_1163882513300012927Vadose Zone SoilTMAQGKPVMRQQSKPRKKAKPLKPPERSGLFPVVTSNLLNMICVTTVFATVLAVLLGVAKWA*
Ga0137404_1124664123300012929Vadose Zone SoilMAQGKPVMRQQSKPRKKAKPLKPPERSGLFPVVTSNLLNMICVTTVFASVLAVLLGVAKWM*
Ga0137407_1055944513300012930Vadose Zone SoilMAQGKPVMRHQSKTRKNAKPLKAPERSGFFPVVTSNLLNMICVTTVFATVLAVLLGVAKWT*
Ga0137410_1022222523300012944Vadose Zone SoilMAQGKPAMRQQSKPRKKAKPLNPPERSGLFPVVTSNLLNMICVITVFASVLAVLLGVAKWT*
Ga0137418_1004651053300015241Vadose Zone SoilXTMAQGKPVMRQQSKPRKKAKPLKPPERSGLFPVVTSNLLNMICVTTVFATVLAVLLGVAKWT*
Ga0137412_1032260223300015242Vadose Zone SoilMAQREPVMRQQSKPRKKAKPLKASEPSGLFPVVTSNLLNMICVTTVFATVLAVLLGVAKWA*
Ga0184604_1010139013300018000Groundwater SedimentMAQGKPVMRQQSKPRKNAKQLKSAERSGLFPVVTSNLLNMIGVTTVFAMVL
Ga0184608_1007436623300018028Groundwater SedimentMAQGKPVMRHQSKARKNAKPLKAPERSGFFPVVTSNLLNMICVTTVFATVLAVLLGVAKW
Ga0137408_125658823300019789Vadose Zone SoilMAQRKPAMRQQSKPRKNAKSLKAAERSGLFPVVTSNLLNMICVTTVFASVLAVLLGVAKW
Ga0137408_1286561123300019789Vadose Zone SoilMAQGKPVMRQQSKPRKKAKPLKPPERSGLFPVVTSNLLNMICVTTVFASVLAVLLGVAKW
Ga0137408_132862943300019789Vadose Zone SoilAQRKPAMRQQSKPRKNAKSLKAAERSGLFPVVTSNLLNMICVTTIFATVLAVLLGVAKWT
Ga0193704_104002423300019867SoilMAQGKPVMRQQSKPRKNAKQLKSAERSGLFPVVTSNLLNMICVTTVFATVLAVLLGVAKW
Ga0193744_100680423300019874SoilMMGQQSKQRKKAKPLKPPERSGLFPVVTSNLLNMICVTTVFASVLAVLLGISKWT
Ga0193715_100541243300019878SoilMPMRQAIESKARKNAKPLKAPERSGFFPVVTSNLLNMICVTTVFATVLAVLLGVAKWT
Ga0193727_100358793300019886SoilMAQGKQVMRHQSKARKNAKPLKAPERSGFFPVVTSNLLNMICVTTVFATVLAVLLGVAKW
Ga0193729_1001024163300019887SoilMAQREPVMRQQSKPRKKAKPLKAPERSGLFPVVTSNLLNMICVTTVFATVLAVLLGIAKW
Ga0193728_117457913300019890SoilMAQREPVMRQQSKPRKKAKPLKAPERSGFFPVVTSNVLNMICVTTVVATVLAVLLGVAKW
Ga0193726_116388413300020021SoilMMRQQGKQRRKAKPLKPPERSGLFPVVTSNLLNMIGVTTVFATVLAVLLGVAKWT
Ga0179594_1021797923300020170Vadose Zone SoilMAQGKPVMRQQSKPRKKAKPLKPPERSGLFPVVTSNLLNMICVITVFASVLAVLLGVAKW
Ga0179592_1017156713300020199Vadose Zone SoilMAQREPVMRQQSKPRKKAKPLKAPERSGFLPVVTSNVLNMICVTTVVATVLAVLLGVAKW
Ga0210382_1025317113300021080Groundwater SedimentVAQRKPVMRQQSKQRKKAKPLKPPERSGLFPVVTSNLPNMIGVTTVFATVLAVLLGVAKW
Ga0179596_1017838223300021086Vadose Zone SoilMAQREPVMRQQSKPRKKAKPLKAPERSGFFPVVTSNVLNMICVTTVVATVLVVLL
Ga0179596_1032649413300021086Vadose Zone SoilQSKPSKKAKPLKAPERSGFFPVVTSSLLNMICVTTVVATVLAVLLGVAKWT
Ga0210400_1008624533300021170SoilMARRTAMRQQGKSRKNVRPLKAPERSGLFPVVASNLLNMICVTAAFATVLAILLGVAKWT
Ga0210405_1108134123300021171SoilMARRKPAMQQQGKPRKNARPLKAPERSGLFPVVTSNLLNMFCVTAAFATVLAVLLGVAKW
Ga0210408_1042361233300021178SoilMAQRKPVTRPQSKPRKNVSSKAFEQPGLFAVMTSNLLNMIWVTIAFATVLAVLLGVAKWA
Ga0210390_1122643723300021474SoilMAQRKPVTRQQSKPRKNVSWKAFEQPGLFAVITSNLLNMIWVTTAFAAVLAVLLGVAK
Ga0222623_1012077313300022694Groundwater SedimentRVKRRKKAKPLKAPERSGFIPVVTSTLLDIICTTTVFATVLAVLLGVAKWA
Ga0209385_112356013300025650Arctic Peat SoilSKCLSPSLTGITMAQRKPVMRQQSKPRKNVKPLKAPERSGFFPVVTSNLLNLICMTTAFATVLAVLLGVAKWT
Ga0209863_1000891433300026281Prmafrost SoilMAQREPVMRQPGKPRKKAKPLKAPERSGFFPVVTSNVLNMICVTTVVATVLAVLLGVAKW
Ga0209438_100394883300026285Grasslands SoilVPGQLAYRENMAQRKPVTRQPRKRRKKAKPLKAPERSGFFPVVTSTLLSIICTTTVFATVLAVLLGIAKWA
Ga0209438_105413433300026285Grasslands SoilMAQGKPVMRQQSKPRKKAKPLKPPERSGLFPVVTSNLLNMICVTTVFATVLAVLLGVAKW
Ga0209890_1026565913300026291SoilVAQRKPVMRQQSKPRTKAKPLKPPERSGFFPVVTSNLLNMICVTTVFATVLAVLLGVAKW
Ga0209647_129325223300026319Grasslands SoilMARRKPAMQQQGKPRKNVRPLKAPEGSGFFSVVTSNLLNMTCVTAAFATVLAVFLGVAKW
Ga0209131_1005030123300026320Grasslands SoilVPEQLAYRENMAQRKPVTRQPRKRRKKAKPLKAPERSGFFPVVTSTLLSIICTTTVFATVLAVLLGIAKWA
Ga0257166_103393023300026358SoilMAQGKPVMRQQSKPRKKAKPLNPPERSGLFPVVTSNLLNMICVTTVFATVLAVLLGVAKW
Ga0257176_106429123300026361SoilQSKPRKKAKPLKAPERSGLFPVVTSNLLNMICVTTVFATVLAVLLGIAKWA
Ga0257176_106891223300026361SoilMAQGKPVMRQQSKPRKKAKPLNPPERSGLFPVVTSNLLNMICVITVFASVLAVLLGVAKW
Ga0257172_111122413300026482SoilQGKPVMRQQSKPRKKAKPLNPPERSGLFPVVTSNLLNMICVTTVFGTVLAVLLGVAKWT
Ga0209648_1011352523300026551Grasslands SoilMAQREPVMRQQSKPRKKAKPLKAPERSGFFPIVTSNVLNMICVTTVVATVLAVLLGVAKW
Ga0208997_100423823300027181Forest SoilMAQGKPVMRHQSKARKNAKPLKAPERSGFFPVVTSNLLNMICVTTVFASVLAVLLGVAKW
Ga0208983_103519723300027381Forest SoilMAQGKPAMRQQSKPRKKAKPLKPPERSGLFPVVTSNLLNMICVTTVFATVLAVLLGVAKW
Ga0209213_100369933300027383Forest SoilMAQREPVMRQQSKPRNKAKPLKASERSGLFPVVTSNLLNMICVTTVFATVLAVLLGVAKW
Ga0208984_111148123300027546Forest SoilMAQREPVMQRQSKPRKKAKPLKTSERSGLFPVVASNLLNMICVTTVFATVLAILLGVAKW
Ga0209331_101723033300027603Forest SoilMAQRKPTMQQQGKPRKNVRPLNALEGSRFVSVVTSNPLNMTCVTTAFATVLAVLLGVAKW
Ga0209106_109081323300027616Forest SoilMGPSLTGITMAQREPVMRQQSKPRKKAKPLKAPERSGFLPVVTSNVLNMICVTTVVATVLAVLLGVAKWT
Ga0209076_118932913300027643Vadose Zone SoilAQREPVMRQQSKPRKKAKPLKAPERSGFFPVVTSNLLNMACVTTVFASVLAVLLGVAKWT
Ga0209217_102923633300027651Forest SoilMAQRKPTMQQQGKPRKNVRPLNALEGSRFVSVVTSNLLNMTCVTTAFATVLAVLLGVAKW
Ga0209180_1007137553300027846Vadose Zone SoilMAQREPVMRQQSKPRKKAKPLKAPERSRFFPVVTSNVLNMICVTTVVATVLAVLLGVAKW
Ga0209180_1015779613300027846Vadose Zone SoilLRRSKCLSTSLTGIIMAQREPVMRQQSKPRKKAKPLKAPERSGLFPVVTSNLLNMICVTTVFATVLAVLLGIAKWA
Ga0209701_1000805533300027862Vadose Zone SoilMAQRKPVMRQQSKPSKKAKPLKAPERSGFFPVVTSSLLNMICVTTVVATVLAVLLGVAKW
Ga0209583_1003883133300027910WatershedsMAQGKPVMRQQSKPRKNAEQLKSAERSGLFPVVTSNLINMICVTTVFAMVLALLLGVAKW
Ga0209526_1024388123300028047Forest SoilMVARRKPAMQHQGKPPKNVRPSDGPGFFPVVTSNLLNMICVTAAFAMVLAVLLGVAKWT
Ga0209526_1027158213300028047Forest SoilMVRRKPAMLQQGKPRKNVRPLMAPEGSGFFSVVKSNLLNMTCVTTAFATVLAVLLGVAKW
Ga0137415_1086467923300028536Vadose Zone SoilMAQREPVMQQQSKSRKAKPLKASERSGLFPVVTSNLLNKIFVTIVFAAVLAVLLGVAKWT
Ga0307504_1006018433300028792SoilTMAQGKLVMRQQSKPRKKAKPLKPPERSGLFPVVTSNLLNMICVTTVFASVLAVLLGVAKWT
Ga0307287_1025312913300028796SoilMAQGKPVMRHQHQSKARKNAKPLKAPERSGFFPVVTSNLLNMICVTTVFATVLAVLLGVAKWT
Ga0307312_1066472223300028828SoilALGVPDQLVYRENVAQRKPVTRQPRKRREKAKPLKAPERSGFIPVVTSTLLDIICTTTVFATVLAVLLGIAKWA
Ga0307479_1147152923300031962Hardwood Forest SoilRKPTMRRPNKPHKAPEGSGFFPVVTSNLLNMFCVTAAFVTVLAVLLGVAKWT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.