Metagenome Family F063523

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063523
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	88 residues
Representative Sequence	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLERLHPGWRQSEIERAMDKVSQTPGAITYLPTFICALCQKTMPCLGAPNR
Number of Associated Samples	102
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.84 %
% of genes near scaffold ends (potentially truncated)	27.91 %
% of genes from short scaffolds (< 2000 bps)	78.29 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (46.512 % of family members)
Environment Ontology (ENVO)	Unclassified (56.589 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.713 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.67% β-sheet: 2.33% Coil/Unstructured: 50.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF14534	DUF4440	14.73
PF01145	Band_7	7.75
PF01381	HTH_3	3.10
PF00118	Cpn60_TCP1	2.33
PF00011	HSP20	1.55
PF00027	cNMP_binding	0.78
PF04434	SWIM	0.78
PF04226	Transgly_assoc	0.78
PF08734	GYD	0.78
PF02607	B12-binding_2	0.78
PF01695	IstB_IS21	0.78
PF00166	Cpn10	0.78
PF09723	Zn-ribbon_8	0.78
PF00300	His_Phos_1	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	2.33
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	1.55
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.78
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.78
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.78
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.78
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	0.78
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	74.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.33 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	74.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.88 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.33 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	74.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.33 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	2.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	73.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.88 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	2.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	73.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.88 %
Candidatus Brocadiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae	2.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	73.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.88 %
Candidatus Brocadia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia	2.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.33 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	73.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.88 %
Candidatus Brocadia sinica	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia → Candidatus Brocadia sinica	2.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.33 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000574\|JGI1357J11328_10180245	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	580	Open in IMG/M
3300000955\|JGI1027J12803_101743567	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	724	Open in IMG/M
3300002120\|C687J26616_10031913	All Organisms → cellular organisms → Bacteria → Proteobacteria	1931	Open in IMG/M
3300002243\|C687J29039_10057635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1496	Open in IMG/M
3300004080\|Ga0062385_11208286	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300005166\|Ga0066674_10115069	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1255	Open in IMG/M
3300005172\|Ga0066683_10195885	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1247	Open in IMG/M
3300005176\|Ga0066679_10193074	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1295	Open in IMG/M
3300005177\|Ga0066690_10016294	All Organisms → cellular organisms → Bacteria	4008	Open in IMG/M
3300005445\|Ga0070708_100030442	All Organisms → cellular organisms → Bacteria → Proteobacteria	4666	Open in IMG/M
3300005450\|Ga0066682_10675869	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	638	Open in IMG/M
3300005467\|Ga0070706_101473879	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	622	Open in IMG/M
3300005468\|Ga0070707_100048451	All Organisms → cellular organisms → Bacteria → Proteobacteria	4070	Open in IMG/M
3300005471\|Ga0070698_101858646	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	555	Open in IMG/M
3300005554\|Ga0066661_10056934	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2251	Open in IMG/M
3300005555\|Ga0066692_10065613	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2065	Open in IMG/M
3300005558\|Ga0066698_11023374	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	524	Open in IMG/M
3300005559\|Ga0066700_10940377	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	572	Open in IMG/M
3300005568\|Ga0066703_10120033	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1562	Open in IMG/M
3300006032\|Ga0066696_10875211	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	572	Open in IMG/M
3300006796\|Ga0066665_10029155	All Organisms → cellular organisms → Bacteria → Proteobacteria	3594	Open in IMG/M
3300006904\|Ga0075424_102143105	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	589	Open in IMG/M
3300007265\|Ga0099794_10634872	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	567	Open in IMG/M
3300009012\|Ga0066710_102884044	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	675	Open in IMG/M
3300009012\|Ga0066710_103190173	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	630	Open in IMG/M
3300009038\|Ga0099829_11718549	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	515	Open in IMG/M
3300009088\|Ga0099830_10045963	All Organisms → cellular organisms → Bacteria	3054	Open in IMG/M
3300009088\|Ga0099830_10223071	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1482	Open in IMG/M
3300009088\|Ga0099830_10846236	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	755	Open in IMG/M
3300009088\|Ga0099830_11289228	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	607	Open in IMG/M
3300009088\|Ga0099830_11386982	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	585	Open in IMG/M
3300009089\|Ga0099828_10125777	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2245	Open in IMG/M
3300009090\|Ga0099827_10311686	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1333	Open in IMG/M
3300009090\|Ga0099827_10933965	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	752	Open in IMG/M
3300009090\|Ga0099827_10971830	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	736	Open in IMG/M
3300009090\|Ga0099827_11132781	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	680	Open in IMG/M
3300009090\|Ga0099827_11951649	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	511	Open in IMG/M
3300009137\|Ga0066709_101009242	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1219	Open in IMG/M
3300009137\|Ga0066709_103003148	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	619	Open in IMG/M
3300009162\|Ga0075423_10274344	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1767	Open in IMG/M
3300009803\|Ga0105065_1065490	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	548	Open in IMG/M
3300010304\|Ga0134088_10412521	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	659	Open in IMG/M
3300010335\|Ga0134063_10374619	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	695	Open in IMG/M
3300011269\|Ga0137392_10259027	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1432	Open in IMG/M
3300011269\|Ga0137392_10847645	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	754	Open in IMG/M
3300011270\|Ga0137391_10895492	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	726	Open in IMG/M
3300011270\|Ga0137391_10942469	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	705	Open in IMG/M
3300011271\|Ga0137393_11067325	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	687	Open in IMG/M
3300011271\|Ga0137393_11648410	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	530	Open in IMG/M
3300012096\|Ga0137389_10574186	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	969	Open in IMG/M
3300012096\|Ga0137389_10995640	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	719	Open in IMG/M
3300012164\|Ga0137352_1112308	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	538	Open in IMG/M
3300012189\|Ga0137388_11165815	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	708	Open in IMG/M
3300012189\|Ga0137388_11568584	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	595	Open in IMG/M
3300012199\|Ga0137383_10014326	All Organisms → cellular organisms → Bacteria → Proteobacteria	5389	Open in IMG/M
3300012201\|Ga0137365_10477161	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	917	Open in IMG/M
3300012201\|Ga0137365_10544556	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	852	Open in IMG/M
3300012201\|Ga0137365_10828780	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	675	Open in IMG/M
3300012202\|Ga0137363_10048559	All Organisms → cellular organisms → Bacteria	3030	Open in IMG/M
3300012205\|Ga0137362_10056879	All Organisms → cellular organisms → Bacteria	3206	Open in IMG/M
3300012205\|Ga0137362_10556046	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	991	Open in IMG/M
3300012206\|Ga0137380_10604994	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	958	Open in IMG/M
3300012208\|Ga0137376_11268328	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	627	Open in IMG/M
3300012209\|Ga0137379_10167193	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2111	Open in IMG/M
3300012209\|Ga0137379_10240341	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1724	Open in IMG/M
3300012210\|Ga0137378_10728661	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	903	Open in IMG/M
3300012211\|Ga0137377_11704944	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	552	Open in IMG/M
3300012349\|Ga0137387_10044007	All Organisms → cellular organisms → Bacteria	2950	Open in IMG/M
3300012349\|Ga0137387_10984816	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	606	Open in IMG/M
3300012350\|Ga0137372_10072638	All Organisms → cellular organisms → Bacteria	2957	Open in IMG/M
3300012351\|Ga0137386_10622931	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	776	Open in IMG/M
3300012354\|Ga0137366_10711146	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia → Candidatus Brocadia sinica	716	Open in IMG/M
3300012355\|Ga0137369_10796603	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	644	Open in IMG/M
3300012357\|Ga0137384_10063057	All Organisms → cellular organisms → Bacteria	3074	Open in IMG/M
3300012357\|Ga0137384_10731321	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	803	Open in IMG/M
3300012357\|Ga0137384_11050825	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	654	Open in IMG/M
3300012359\|Ga0137385_10813958	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	775	Open in IMG/M
3300012362\|Ga0137361_10117745	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2337	Open in IMG/M
3300012363\|Ga0137390_10757800	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	930	Open in IMG/M
3300012363\|Ga0137390_10880756	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	851	Open in IMG/M
3300012582\|Ga0137358_10227485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1271	Open in IMG/M
3300012918\|Ga0137396_10137702	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1771	Open in IMG/M
3300012929\|Ga0137404_10045610	All Organisms → cellular organisms → Bacteria	3332	Open in IMG/M
3300012931\|Ga0153915_10498557	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300015359\|Ga0134085_10212362	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia → Candidatus Brocadia sinica	835	Open in IMG/M
3300018059\|Ga0184615_10068704	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1981	Open in IMG/M
3300018061\|Ga0184619_10391587	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	629	Open in IMG/M
3300018431\|Ga0066655_10236347	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia → Candidatus Brocadia sinica	1157	Open in IMG/M
3300018433\|Ga0066667_10018456	All Organisms → cellular organisms → Bacteria	3634	Open in IMG/M
3300018468\|Ga0066662_10024481	All Organisms → cellular organisms → Bacteria	3462	Open in IMG/M
3300018482\|Ga0066669_11082175	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	724	Open in IMG/M
3300019789\|Ga0137408_1188254	All Organisms → cellular organisms → Bacteria	3694	Open in IMG/M
3300020022\|Ga0193733_1043785	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1265	Open in IMG/M
3300021063\|Ga0206227_1003743	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1936	Open in IMG/M
3300021344\|Ga0193719_10452852	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	522	Open in IMG/M
3300025002\|Ga0209001_1008113	All Organisms → cellular organisms → Bacteria	1847	Open in IMG/M
3300025174\|Ga0209324_10390080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300025319\|Ga0209520_10236937	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1137	Open in IMG/M
3300025324\|Ga0209640_10655886	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	841	Open in IMG/M
3300025325\|Ga0209341_10566607	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	895	Open in IMG/M
3300025327\|Ga0209751_11092961	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	594	Open in IMG/M
3300025910\|Ga0207684_10537092	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1001	Open in IMG/M
3300025922\|Ga0207646_10090960	All Organisms → cellular organisms → Bacteria	2731	Open in IMG/M
3300026309\|Ga0209055_1042976	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300026328\|Ga0209802_1168561	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	898	Open in IMG/M
3300026331\|Ga0209267_1078424	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300026333\|Ga0209158_1027400	All Organisms → cellular organisms → Bacteria	2495	Open in IMG/M
3300026359\|Ga0257163_1002708	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2346	Open in IMG/M
3300026371\|Ga0257179_1059276	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	507	Open in IMG/M
3300026469\|Ga0257169_1034323	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	766	Open in IMG/M
3300026530\|Ga0209807_1202735	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	695	Open in IMG/M
3300026532\|Ga0209160_1067293	All Organisms → cellular organisms → Bacteria	1960	Open in IMG/M
3300026537\|Ga0209157_1278023	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	627	Open in IMG/M
3300027815\|Ga0209726_10005603	All Organisms → cellular organisms → Bacteria	15087	Open in IMG/M
3300027846\|Ga0209180_10068033	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1992	Open in IMG/M
3300027846\|Ga0209180_10109199	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1580	Open in IMG/M
3300027862\|Ga0209701_10042519	All Organisms → cellular organisms → Bacteria	2932	Open in IMG/M
3300027862\|Ga0209701_10146535	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1444	Open in IMG/M
3300027862\|Ga0209701_10208625	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1161	Open in IMG/M
3300027875\|Ga0209283_10111686	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1795	Open in IMG/M
3300028047\|Ga0209526_10878916	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300028536\|Ga0137415_10037376	All Organisms → cellular organisms → Bacteria	4761	Open in IMG/M
3300028792\|Ga0307504_10151435	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	788	Open in IMG/M
3300028828\|Ga0307312_10625650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	712	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10009357	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2523	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1145916	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	588	Open in IMG/M
3300031965\|Ga0326597_10168170	All Organisms → cellular organisms → Bacteria	2601	Open in IMG/M
3300031965\|Ga0326597_11723006	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	591	Open in IMG/M
3300033407\|Ga0214472_10763398	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	873	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.45%
Host-Associated	Host-Associated	1.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.02%
Aquatic	Environmental → Aquatic	5.43%
Plants	Host-Associated → Plants	1.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.25%
Freshwater	Environmental → Aquatic → Freshwater	3.10%
Sediment	Environmental → Aquatic → Sediment	2.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.55%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.62%
Loam	Environmental → Terrestrial → Soil → Loam	9.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.33%
Sand	Environmental → Terrestrial → Soil → Sand	2.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.55%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	55.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.65%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.33%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.33%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	1.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.55%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.78%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.78%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	46.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.65%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.33%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	1.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.55%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	1.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.55%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.78%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.78%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.78%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000574	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002120	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2	Environmental	Open in IMG/M
3300002243	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009803	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012164	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT730_2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021063	Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos D4	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025002	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 2 (SPAdes)	Environmental	Open in IMG/M
3300025174	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1357J11328_101802451	3300000574	Groundwater	RRAVGGILRGDKYQGKFVCLPCLVTMTLERLHPGWRQSETERAMDKMFKTPGAINYLPTFICARCQKTMPCLGAPNR*
JGI1027J12803_1017435671	3300000955	Soil	GSLGKKEAAMTYNTEDFVRRAAGGILRGDKYRGKFVCLPCLVRMTLEHLHPGWRQSEIERAMDTVFQSPGALRSAPTFLCALCHKTVPCLGAPPR*
C687J26616_100319132	3300002120	Soil	MIYSTEDFVRRAVGGIFRGDKYRGKFVCLPCLVTMTLERLHSGWRQSEIERAMDTVFQSPGALRSVPTFLCAGCRKTMPCLGAPSP*
C687J29039_100576354	3300002243	Soil	EASMIYSTEDFVRRAVGGIFRGDKYRGKFVCLPCLVTMTLERLHSGWRQSEIERAMDTVFQSPGALRSVPTFLCAGCRKTMPCLGAPSP*
Ga0062385_112082862	3300004080	Bog Forest Soil	VTYSTEDFVRRAAGGILRGDKYRGKFVCLPRLVTMTLERLHSGWRQSEIERAMDKVSKTPGAITYLPTCICALCQKTMPCLGAPNR*
Ga0066674_101150691	3300005166	Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPRE
Ga0066683_101958851	3300005172	Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLSCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPREAS*
Ga0066679_101930742	3300005176	Soil	MTYSTEDFVRRAAGDILRGNKYRGKFVCLSCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQETMPCLGLPIGEGRQREIPREAS*
Ga0066690_100162946	3300005177	Soil	MTYSTEDFVRRAAGDILRGNKYRGKFVCLSCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPREAS*
Ga0070708_1000304424	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLERLHPGWRQSEIERAMDKVSQTPGAITYLPTFICALCQKTMPCLGAPHR*
Ga0066682_106758691	3300005450	Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPREAS*
Ga0070706_1014738792	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTYSTEDFVRRAVGGILRGDKYRGQFVCLPCLVTMTLKRLHSGWRQSEVEGAMDKVSKTPGAINYLPTFTCAVCTKTRPCLGVPNR*
Ga0070707_1000484516	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTYSTEDFVRRAAGGILRGDKYRGKFVCLPCLVTMTLERLHSGWRQSEIEGAMDKVSKTPGAINYLPTFICAVCTKTRPCLGVPNR*
Ga0070698_1018586461	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLERLHPGWRQSEIERAMDKVSQTPGAITYLPTFICALCQKTMPCLGAP
Ga0066661_100569344	3300005554	Soil	ILRGNKYRGKFVCLSCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPREAS*
Ga0066692_100656134	3300005555	Soil	NKYRGKFVCLSCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPREAS*
Ga0066698_110233741	3300005558	Soil	RGNKYRGKFVCLPCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQRETPREAS*
Ga0066700_109403772	3300005559	Soil	VRRAVGGILRGDKYRGQFVCLPCLVTMTLKRLHSGWRQSEIEGAMDKVSKTPGAINYLPTFTCAVCTKTRPCLGVPNR*
Ga0066703_101200332	3300005568	Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLSCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQRETPREAS*
Ga0066696_108752111	3300006032	Soil	GEKGAAMTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPREAS*
Ga0066665_100291556	3300006796	Soil	MAYRTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMALKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPREAS*
Ga0075424_1021431052	3300006904	Populus Rhizosphere	MTYNTEGFVRRAAGGILRGDKCRGKFVCLPCLVRMTLEHLHPGWRQSEIERAMDTVFQSPGALRSVPTFLCALCHKTVPCLGAPPR*
Ga0099794_106348721	3300007265	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGASLR*
Ga0066710_1028840441	3300009012	Grasslands Soil	MTYSTEDFVRRAVDGILRGDNYRGMFVCLPCLVTMTLKRLHSGWRQSEVEGAMDKVSKTPGAINYLPTFTCAVCTKTRPCLGVPNR
Ga0066710_1031901731	3300009012	Grasslands Soil	MTYSTEDFVRRAVGGILRGDKYRGQFVCLPCLVTMTLKRLHSGWRQSEIERAIDKVSKTPGATNYLPTFSCAV
Ga0099829_117185491	3300009038	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTRDRLHSGWRQSEIERAMDKVSQTPGAITYLPTFICALCDKTMPCLGVPHR*
Ga0099830_100459633	3300009088	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTRDRLHSGWRQSEIERAMDKVSQTPGAITYLPTFICALCQKTMPCLGAPHR*
Ga0099830_102230712	3300009088	Vadose Zone Soil	MTYSTEDFVRRAVGGILRGDKYRGMFVCLPCLVTMTLKRLHSGWRQSEIEGAMDKGSKTPGAINYLPTFTCAVCTKTRPCLGVPNR*
Ga0099830_108462361	3300009088	Vadose Zone Soil	MTYNTEDFVRRAAGGILRGDKYRGKFVCLPCLVRMTLEHLHPGWRQSEIERAMDTVFQSPGALRSVPTFLCALCHKTVPCLGAPPR*
Ga0099830_112892281	3300009088	Vadose Zone Soil	MTYSTENFVRRAVGGILRGDRYQGKFVCLPCLVTMTLERLHSGWRQSEIEGAMDKVSKTPGAINYLPTFICARCQKTMPC
Ga0099830_113869821	3300009088	Vadose Zone Soil	TEDFVRRAAGGVLRGNKYRGKFVCLPCLVTMTLERLHPGWRQSEIERAMYKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQRGIPTEAS*
Ga0099828_101257775	3300009089	Vadose Zone Soil	MTYSTENFVRRAVGGILRGDRYQGKFVCLPCLVTMTLERLHSGWRQSEIEGAMDKVSKTPGAINYLPTFICARCQKT
Ga0099827_103116862	3300009090	Vadose Zone Soil	MTYSTENFVRRAVGGILRGDKYRGKFVCLPCLVAMTLELLHSGWRQSEIEGAMDKVSKTPGAINYLPTFICARCQKTMPCLGAPNR*
Ga0099827_109339652	3300009090	Vadose Zone Soil	MTYSTEDFVRRAVGSILRGDKYRGKVVCVPCLITMTLERLHSGWRKSEIERAMVKIVNSPDDLTWMPTLICAICQQTRPCLSAIRL*
Ga0099827_109718301	3300009090	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGDKYRGKFVCLPCLVTMTLERLHPGWRQSEIEQAMDKVSETPGAITYLPTFICALCQKTLPCLGAPSR*
Ga0099827_111327811	3300009090	Vadose Zone Soil	FVRRAAGGILRGNKYRGKFVCLPCLVTMTLERLHPGWRQSEIEGAMDKVSTTPGAITYLPTFICARCQKTMPCLGAPNR*
Ga0099827_119516491	3300009090	Vadose Zone Soil	ILRGDKYRGQFVCLPCLVTMTLKRLHSGWRQSEIEGAIDKVSKTPGAINYLPTFNCAVCTKTRPCLGVPNR*
Ga0066709_1010092422	3300009137	Grasslands Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLKHLHPGWRQSEIERAMDKVSQTPGAIIYLPTCSCALCQKTMPCLGLPIGEGGQREIPTEAS*
Ga0066709_1030031482	3300009137	Grasslands Soil	MTYSTEDFVRRAVGGILRGDKYRGQFVCLPCLVTMTLERLHSGWRQSEIEGAIDKVSKTPGAINYLPTFTCAVCTKTRPCLGVPNR*
Ga0075423_102743443	3300009162	Populus Rhizosphere	VDEEEAAMTYSTEDFVRRAAGGILRGAKYRGKFVCLPCLVTMTRERLHPGWRQSEIERAMDKVSKTPGAITYMPTFICTLCEKTMPCLGVPHR*
Ga0105065_10654901	3300009803	Groundwater Sand	MTYSTEDFVRRAAGGILRGDKYRGKFVCLPCLVTMTLARLHPGWRQSEIEGAMDKVSRTPGAINYLPTFICARCQKTMPCLGAPNR*
Ga0134088_104125211	3300010304	Grasslands Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMARERLHPGWRQSEIERAVDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPREAS*
Ga0134063_103746191	3300010335	Grasslands Soil	ILRGNKYRGKFVCLPCLVTMALKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQRETPREAS*
Ga0137392_102590271	3300011269	Vadose Zone Soil	MTYSTEDFVRRAVGGILRGDKYRGMFVCLPCLVTMTLKRLHSGWRQSEIEGAMDKVSKTPGAINYLPTFTCAVCTKTRPCLGVPNR*
Ga0137392_108476451	3300011269	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLERLHPGWRQSEIERAMDKVSQTPGAISYLPTFICALCQKTMPCLGLPIGEGGQREIPREAS*
Ga0137391_108954922	3300011270	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLERLHPGWRQSEIERAMDKVSQTPGAITYLPTFICALCQKTMPCLGAPNR*
Ga0137391_109424692	3300011270	Vadose Zone Soil	MTYSTEDFVRRAVGGILRGDKYRGMFVCLPCLVTMTLERLHSGWRQSEVEGAMDKVSKTPGAINYLPTFTCAVCTKTRPCLGVPNR*
Ga0137393_110673251	3300011271	Vadose Zone Soil	MTYSTEDFVRRAVGSILRGDKYRGNVVCVPCLVTMTLERLHSGWRKSEIERAMVRIVNSPDDLTWMPTLICAICQQTRPCLSAIRL*
Ga0137393_116484101	3300011271	Vadose Zone Soil	MTYSTEDFVRRAVGGILRGDKYRGMFVCLPCLVTMTLKRLHSGWRQSEIEGAMDKGSKTPGAINYLPTFVCARCQKTMPCLGA
Ga0137389_105741861	3300012096	Vadose Zone Soil	MTYSNEDFVRRAAGGILRGDKYRGKFVCLPCLVTMTRERLHPGWRQSEIEGAMDKVSKTPGAITYLPTFICALCQKTLPCLGAPSR*
Ga0137389_109956402	3300012096	Vadose Zone Soil	MTYSTEDFVRRAVGGILRGDKYRGMFVCLPCLVTMTLERLHSGWRQSEIEGAMDKGSKTPGAINYLPTFTCAVCTKTRPCLAVPNR*
Ga0137352_11123082	3300012164	Soil	MIYSTEDFVRRAVGGILRGDKHRGKCVCLPCLGTMTLERLHSGWRQSEIEGALDKVPRTPGAINYLPTFICAGCQKTMPCLGAPSP*
Ga0137388_111658152	3300012189	Vadose Zone Soil	MTYSTEDFVRRAVGSILRGDKYRGMFVCLPCLVTMTLERLHSGWRQSEIEGAMDKVSKTPGAINYLPTFTCAVCTKTRPCLGVPNR*
Ga0137388_115685841	3300012189	Vadose Zone Soil	MTYSTEDFVRRAAGGLLRGNKYRGKFVCLPCLVTMTRERLHPGWRQSEIERAMDKVSQTPGAITYLPTFICALCQKTMPCLGAPHR*
Ga0137383_100143265	3300012199	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLSCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPRETS*
Ga0137365_104771612	3300012201	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLERLHPGWRQSEIERAMDKVSETPGAITSMPTFICTRCQKTVPCLGAPLR*
Ga0137365_105445563	3300012201	Vadose Zone Soil	GGILRGNKYRGKFVCLPCLVTLTLERLHPGWRQSEIERAMDKVSQTPGVITYLPTFICALCQKTMPCLGAPHR*
Ga0137365_108287802	3300012201	Vadose Zone Soil	VTYSTEDFVRRAVGGILRGDKYRGMFVCLPCLVTMTLKRLHSGWRQSEVEGAMDKVSKTPGAINYLPTFTCAVCTK
Ga0137363_100485591	3300012202	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGDKYRGKFVCLPCLVRMTLERLHPGWRQSEIEQAMDKVSETLGAITYLPTFICALCQKTLPRPRG
Ga0137362_100568795	3300012205	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGDKYRGKFVCLPCLVRMTLEHLHPGWRQSEIERAMDTVFQSPGALRSVPTFLCALCHKTVPCLGAPPR*
Ga0137362_105560462	3300012205	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGDKYRGKFVCLPCLVTMTLERLHSGWRQSEIEGAMDKVSKTPGAINYLPTFTCAVCTKTRPCLGVPNR*
Ga0137380_106049942	3300012206	Vadose Zone Soil	MTYSTEDFVRRAVGGILRGEKYRGMFVCLPCLVTMTLKRLHSGWRQSEVEGAMDKVSKTPGAINYLPTFSCAVCTKTRPCLGVPNR*
Ga0137376_112683282	3300012208	Vadose Zone Soil	PTAPKTSSVAAGGILRGNKYRGKFVCLSCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPRETS*
Ga0137379_101671932	3300012209	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPRETS*
Ga0137379_102403412	3300012209	Vadose Zone Soil	MTYSTEDFVRRAAGGILRANKYRGKFVCLPCLVTMTLERLHPGWRQSEIERAMDKMSQTPGAITYLPTFICALCQKTMPCLGAPHR*
Ga0137378_107286613	3300012210	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLERLHPGWRQSEIERAMDKMSQTPGAITYLPTFICALCQKTMPCLGAPHR*
Ga0137377_117049441	3300012211	Vadose Zone Soil	MTYSTEDFVRRAVGGLLRGDKYRGQFVCLPCLVTMTLKRLHSGWRQSEVEGAMDKVSKTPGAINYLPTFSCAVCTKTRPCLGVPNR*
Ga0137387_100440071	3300012349	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQRETPKEASVP*
Ga0137387_109848161	3300012349	Vadose Zone Soil	MTYSTEDFVRRAVGGILRGEKYRGMFVCLPCLVTMTLKRLHSGWRQSEVEGAMDKVSKTPGAINYLPTFTCAVCTKTRPCLGVPNR*
Ga0137372_100726382	3300012350	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPPCICALCQKTMPCLGLPIGEGGQREIPREAS*
Ga0137386_106229312	3300012351	Vadose Zone Soil	MTYSTEDFVRRAVGGILRGDKYRGRFVCLPCLVTMTLKRLHSGWRQSEVEGAMDKVSKTPGAINYLPTFTCAVCTKTRPCLGVPNR*
Ga0137366_107111461	3300012354	Vadose Zone Soil	TEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPREAS*
Ga0137369_107966031	3300012355	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLERLHTGWRQLEIERAMDKVSKTPGAINYLPTFVCARCQKTMPCLGAPNR*
Ga0137384_100630573	3300012357	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYRPTCICALCQKTMPCLGLPIGEGGQREIPREAS*
Ga0137384_107313211	3300012357	Vadose Zone Soil	STEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLERLHPGWRQSEIERAMDKMSQTPGAITYLPTFICALCQKTMPCLGAPHR*
Ga0137384_110508251	3300012357	Vadose Zone Soil	MTYSTEDFVRRAVGGILRGDKYRGMFVCLPCLVTMTLRRLHSGWRQSEVEGAMDKVSKTPGAINYLPTFTCAVCTKTRPCLGVPNR*
Ga0137385_108139581	3300012359	Vadose Zone Soil	MTYSTEDFVRRAVGGLLRGDKYRGQFVCLPCLVTMTLKRLHSGWRQSEIEGAMDKVSKTPGAINYLPTFTCAVCTKTRPCLGVPNR*
Ga0137361_101177454	3300012362	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGDKYRGKFVCLPCLVRMTLERLHPGWRQSEIERAMDKVSETPGAITYRPTFICAVCTKTRPCLGVPNR*
Ga0137390_107578001	3300012363	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGDKYRGKFVCLPCLVTMTLERLHPGWRQSEIERAMDKVSETPGAITYLPTFICALCQKTMPCLG
Ga0137390_108807561	3300012363	Vadose Zone Soil	MTYRTEDFVRRAVGGILRGDKYRGMFVCLPCLVTMTLKRLHSGWRQSEVEGAMDKVSKTPGAINYLPTFTCAVCTKTRPCLGVPNR*
Ga0137358_102274852	3300012582	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGDKYRGKFVCLPCLVRMTLERLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPREAS*
Ga0137396_101377023	3300012918	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVAMALKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGASLR*
Ga0137404_100456107	3300012929	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGGKYRGKFVCLPCLVRMTLERLHPGWRQSEIERAMDKVSETPGAITYLPTFICALCQKTLPCLGAPSR*
Ga0153915_104985573	3300012931	Freshwater Wetlands	MTYSTEDFVRRAAGGILRGDKYRGKFVCLPCLVTMTLERLHSGWRQSEIERAMDKVSKTPGAITYLPTFICALCQKTMPCLGTPRR*
Ga0134085_102123622	3300015359	Grasslands Soil	YSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPREAS*
Ga0184615_100687042	3300018059	Groundwater Sediment	MTYSTEDFVRRAVGGILRGGEYRGKFICLPCLVTMTLERLHSGWRQSEIEGALDKVPRTPGAINYLPTFLCAGCQKTMPCLGAPNR
Ga0184619_103915871	3300018061	Groundwater Sediment	MTYSTEDFVRRAAGGILRGNKYRGKFVCLSCLVTMTREHLHPGWRQSEIERAIDKVSKTPGAITYMPTFNCALCQKTMPCLGAPHR
Ga0066655_102363472	3300018431	Grasslands Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLSCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMHCLGLPIGEGGQREMPREAS
Ga0066667_100184563	3300018433	Grasslands Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLSCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPREAS
Ga0066662_100244814	3300018468	Grasslands Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQRETPREAS
Ga0066669_110821751	3300018482	Grasslands Soil	LGEKGAAMTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPREAS
Ga0137408_11882544	3300019789	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGGKYRGKFVCLPCLVRMTLERLHPGWRQSEIERAMDKVSETPGAITYLPTFICALCQKTLPCLGAPSR
Ga0193733_10437852	3300020022	Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLSCLVTMTREHLHPGWRQSEIERAMDKVSKTPGAIIYLPTFICALCQKTMPCLGAPSP
Ga0206227_10037431	3300021063	Deep Subsurface Sediment	MTYSTEDFVRRAAGGILRGGKYRGKFVCLPCLVTMTLERLHSGWRQSEIEGAMDKIFKTPGAINYLPAFICAGCQKTMPCLGAPNR
Ga0193719_104528521	3300021344	Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTREHLHPGWRQSEIERAMDKVSKTPGAITYLPTFICALCQKTRPCLGAPSR
Ga0209001_10081132	3300025002	Soil	MIYSTEDFVRRAVGGIFRGDKYRGKFVCLPCLVTMTLERLHSGWRQSEIERAMDTVFQSPGALRSVPTFLCAGCRKTMPCLGAPSP
Ga0209324_103900801	3300025174	Soil	RRAVGGIFRGDKYRGKFVCLPCLVTMTLERLHSGWRQSEIERAMDTVFQSPGALRSVPTFLCAGCRKTMPCLGAPSP
Ga0209520_102369372	3300025319	Soil	MIYSTEDFVRRAVGGIFRGDKYRGKFVCLPCLVTMTLERLHSGWRQSEIERAMDTVFQSPGALRSVPTFLCADCKKTMPCLGAPSP
Ga0209640_106558861	3300025324	Soil	AAGGILRGDKYQGKFVCLPCLVTMTLERPHSGWRQSEIERAMDKVFKTPGANTDLPTFICALCQKTMPCLGTPRR
Ga0209341_105666071	3300025325	Soil	MTYSTEDFVRRAVGGILRGDKYRGKFVCLPCLVTMTLERLHPGWRQSEIERAMDTVFQSPGALRSVPTFLCADCKKTMPCLGAPSP
Ga0209751_110929611	3300025327	Soil	MTYSTEDFVRRAVGGILRGDKYRGKFVCLPCLVTMTLERLHPGWRQSEIERAMDTVFQSPGTLRSVPTFLCADCKKTMPCLGAPSP
Ga0207684_105370922	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLERLHPGWRQSEIERAMDKVSQTPGAITYLPTFICALCQKTMPCLGAPHR
Ga0207646_100909604	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTYSTEDFVRRAAGGILRGDKYRGKFVCLPCLVTMTLERLHSGWRQSEIEGAMDKVSKTPGAINYLPTFICAVCTKTRPCLGVPNR
Ga0209055_10429761	3300026309	Soil	KYRGKFVCLSCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPREAS
Ga0209802_11685611	3300026328	Soil	VEKGAAMTYSTEDFVRRAAGGILRGNKYRGKFVCLSCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPREAS
Ga0209267_10784241	3300026331	Soil	AAGGILRGNKYRGKFVCLSCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPREAS
Ga0209158_10274001	3300026333	Soil	MTYSTEDFVRRAAGDILRGNKYRGKFVCLSCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPREAS
Ga0257163_10027083	3300026359	Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTFICALCQKTMPCLGAPLR
Ga0257179_10592762	3300026371	Soil	MTYSTEDFVRRAAGGVLRGNKYRGKFVCLPCLVTMTLERLHSGWRQSEIEGAMDKVSKTPGAINYLPTFVCARCQKTMPCLGAPNR
Ga0257169_10343231	3300026469	Soil	MTYSTEDFVRRAAGGILRGDKYRGKFVCLPCLVTMTRERLHPGWRQSEIERAMDKVSQTPGAITYLPTFICALCQKTMPCLGAPHR
Ga0209807_12027352	3300026530	Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPREAS
Ga0209160_10672933	3300026532	Soil	EDFVRRAAGDILRGNKYRGKFVCLSCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGLPIGEGGQREIPREAS
Ga0209157_12780231	3300026537	Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLSCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICAL
Ga0209726_1000560317	3300027815	Groundwater	MTYSTEDFVRRAVGGILRGDKYQGKFVCLPCLVTMTLERLHPGWRQSETERAMDKMFKTPGAINYLPTFICARCQKTMPCLGAPNR
Ga0209180_100680332	3300027846	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTRDRLHSGWRQSEIERAMDKVSQTPGAITYLPTFICALCDKTMPCLGVPHR
Ga0209180_101091992	3300027846	Vadose Zone Soil	MTNSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLERLHPGWRQSEIERAMDKVSETPGAINYLPTFICARCQKTMPCLGAPNR
Ga0209701_100425193	3300027862	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTRDRLHSGWRQSEIERAMDKVSQTPGAITYLPTFICALCQKTMPCLGAPHR
Ga0209701_101465352	3300027862	Vadose Zone Soil	MTYSTEDFVRRAVGGILRGDKYRGMFVCLPCLVTMTLERLHSGWRQSEIEGAMDKVSKTPGAINYLPTFICARCQKTMPCLGAPNR
Ga0209701_102086251	3300027862	Vadose Zone Soil	MTYNTEDFVRRAAGGILRGDKYRGKFVCLPCLVRMTLEHLHPGWRQSEIERAMDTVFQSPGALRSVPTFLCAGCRNTMPCLGAPSP
Ga0209283_101116861	3300027875	Vadose Zone Soil	MTYSTEDFVRRAVGGILRGDKYRGMFVCLPCLVTMTLKRLHSGWRQSEIEGAMDKGSKTPGAINYLPTFTCAVCTKTRPCLGVPNR
Ga0209526_108789161	3300028047	Forest Soil	ACPRRIGSLGEEEAAMTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLERLHPGWRQSEIERAMDKVSQTPGAITYLPTFICALCQKTMPCLGAPHR
Ga0137415_100373763	3300028536	Vadose Zone Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTLKRLHPGWRQSEIERAMDKVSQTPGAITYLPTCICALCQKTMPCLGASLR
Ga0307504_101514351	3300028792	Soil	MTYSTEDFVRRAAGGILRGDKYRGKYVCLPCLVRMTLERLHPGWRQSEIERAMDKVSETPGAITYLPTFICALCQKTMPCLGAPHR
Ga0307312_106256501	3300028828	Soil	MTYSTEDFVRRAAGGILRGNKYRGKFVCLPCLVTMTREHLHPGWRQSEIERAMDKVSKTPGAITYLPTFICALCQKTMPCLGAPHR
(restricted) Ga0255310_100093572	3300031197	Sandy Soil	MTYSTEDFVRRAAGGILRGNKYRGMFVCLPCLVTMTRERLHPGWRQSEIERAMDKVSQTPGAITYLPTFICALCQKTMPCLGAPHR
(restricted) Ga0255312_11459162	3300031248	Sandy Soil	MTYSTEDFVRRAAGGILRGDKYRGKFVCLPCLVTMTRERLHPGWRQSEIEGAMDKVSKTLGAITYLPTFICAVCTKTRPCLGIPNR
Ga0326597_101681702	3300031965	Soil	MTYSTEDFVRRAVGGILRGGKYRGKFVCVSCLVTMTLGRLHSGWRQSEIERAMDTVFQSPGALRSVPTFLCADCRKTMPCLGAPSP
Ga0326597_117230061	3300031965	Soil	MTYSTEDFVRRAAGGILRGDKYQGKFVCLPCLVTMTLERPHSGWRQSEIERAMDKVFKTPGANTDLPTFICALCQKTMPCLGTPRR
Ga0214472_107633981	3300033407	Soil	MTYSTEDFVRRAVGGILRGDKYRGKFVCLPCLVTMTLERLHPGWRQSEIERAMDTVFQSPGALRSVPTFLCADCKKTMP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters