Metagenome / Metatranscriptome Family F063517

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063517
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	56 residues
Representative Sequence	VLQNFSSEEVTLWVAPLLDAVAETIGLLLSGAPDAFMSEVARRFAPPDLEAADSSAQS
Number of Associated Samples	113
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.57 %
% of genes near scaffold ends (potentially truncated)	96.90 %
% of genes from short scaffolds (< 2000 bps)	85.27 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.140 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.457 % of family members)
Environment Ontology (ENVO)	Unclassified (34.109 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.02% β-sheet: 0.00% Coil/Unstructured: 56.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF01926	MMR_HSR1	59.69
PF06071	YchF-GTPase_C	10.85
PF04185	Phosphoesterase	3.10
PF08241	Methyltransf_11	2.33
PF00296	Bac_luciferase	1.55
PF07298	NnrU	1.55
PF00106	adh_short	0.78
PF04116	FA_hydroxylase	0.78
PF05050	Methyltransf_21	0.78
PF13432	TPR_16	0.78
PF00753	Lactamase_B	0.78
PF01048	PNP_UDP_1	0.78
PF00589	Phage_integrase	0.78
PF02979	NHase_alpha	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0012	Ribosome-binding ATPase YchF, GTP1/OBG family	Translation, ribosomal structure and biogenesis [J]	10.85
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	3.10
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.55
COG4094	Uncharacterized membrane protein	Function unknown [S]	1.55
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.78
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.78
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.78
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.14 %
Unclassified	root	N/A	41.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.14 %
Unclassified	root	N/A	41.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.14 %
Unclassified	root	N/A	41.86 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	52.71 %
Unclassified	root	N/A	41.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	32.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.86 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	8.53 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	6.98 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.33 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.86 %
gamma proteobacterium IMCC2047	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium IMCC2047	6.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.33 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.78 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.78 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.78 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.86 %
gamma proteobacterium IMCC2047	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium IMCC2047	6.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.33 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.78 %
Methylosarcina	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylosarcina	0.78 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.78 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.86 %
gamma proteobacterium IMCC2047	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium IMCC2047	6.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.33 %
Methylosarcina fibrata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylosarcina → Methylosarcina fibrata	0.78 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.78 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	0.78 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003351\|JGI26346J50198_1026051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	580	Open in IMG/M
3300004082\|Ga0062384_101181343	Not Available	555	Open in IMG/M
3300004156\|Ga0062589_100287110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1262	Open in IMG/M
3300005184\|Ga0066671_10059731	All Organisms → cellular organisms → Bacteria	1968	Open in IMG/M
3300005332\|Ga0066388_100431043	All Organisms → cellular organisms → Bacteria → Proteobacteria	1962	Open in IMG/M
3300005332\|Ga0066388_104812874	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300005332\|Ga0066388_106250097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	601	Open in IMG/M
3300005367\|Ga0070667_101078996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	750	Open in IMG/M
3300005450\|Ga0066682_10563410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	720	Open in IMG/M
3300005454\|Ga0066687_10569377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	672	Open in IMG/M
3300005541\|Ga0070733_10986192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300005575\|Ga0066702_10774404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	571	Open in IMG/M
3300005575\|Ga0066702_10818000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	554	Open in IMG/M
3300005576\|Ga0066708_10073567	All Organisms → cellular organisms → Bacteria	1973	Open in IMG/M
3300005764\|Ga0066903_104157758	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300006032\|Ga0066696_11073170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300006796\|Ga0066665_10918097	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300006797\|Ga0066659_10292111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1240	Open in IMG/M
3300009012\|Ga0066710_102235727	Not Available	797	Open in IMG/M
3300009012\|Ga0066710_103391374	Not Available	606	Open in IMG/M
3300009038\|Ga0099829_11360720	Not Available	587	Open in IMG/M
3300009090\|Ga0099827_10274817	All Organisms → cellular organisms → Bacteria → Proteobacteria	1421	Open in IMG/M
3300009143\|Ga0099792_10715918	Not Available	649	Open in IMG/M
3300010045\|Ga0126311_11459992	Not Available	572	Open in IMG/M
3300010361\|Ga0126378_10495549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1337	Open in IMG/M
3300010362\|Ga0126377_13244843	Not Available	526	Open in IMG/M
3300010366\|Ga0126379_10082151	All Organisms → cellular organisms → Bacteria → Proteobacteria	2796	Open in IMG/M
3300010376\|Ga0126381_100102185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3663	Open in IMG/M
3300010376\|Ga0126381_101372992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1021	Open in IMG/M
3300010376\|Ga0126381_102099996	Not Available	813	Open in IMG/M
3300010396\|Ga0134126_10197190	All Organisms → cellular organisms → Bacteria → Proteobacteria	2411	Open in IMG/M
3300010398\|Ga0126383_11637813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	733	Open in IMG/M
3300010398\|Ga0126383_12668718	Not Available	583	Open in IMG/M
3300010398\|Ga0126383_13186057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	536	Open in IMG/M
3300011271\|Ga0137393_10496471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium IMCC2047	1047	Open in IMG/M
3300011271\|Ga0137393_11063136	Not Available	688	Open in IMG/M
3300012200\|Ga0137382_11327508	Not Available	507	Open in IMG/M
3300012205\|Ga0137362_11336110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	602	Open in IMG/M
3300012211\|Ga0137377_11777915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium IMCC2047	536	Open in IMG/M
3300012354\|Ga0137366_10912176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	617	Open in IMG/M
3300012582\|Ga0137358_10419199	Not Available	905	Open in IMG/M
3300012924\|Ga0137413_11006052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium IMCC2047	654	Open in IMG/M
3300012971\|Ga0126369_11588962	Not Available	744	Open in IMG/M
3300012989\|Ga0164305_11362077	Not Available	623	Open in IMG/M
3300013100\|Ga0157373_10295064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium IMCC2047	1150	Open in IMG/M
3300013764\|Ga0120111_1085439	Not Available	753	Open in IMG/M
3300015245\|Ga0137409_11536861	Not Available	515	Open in IMG/M
3300015357\|Ga0134072_10154016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium IMCC2047	759	Open in IMG/M
3300016294\|Ga0182041_12013655	Not Available	538	Open in IMG/M
3300016341\|Ga0182035_10742544	All Organisms → cellular organisms → Bacteria → Proteobacteria	858	Open in IMG/M
3300016357\|Ga0182032_11870852	Not Available	525	Open in IMG/M
3300016387\|Ga0182040_10019894	All Organisms → cellular organisms → Bacteria → Proteobacteria	3702	Open in IMG/M
3300016404\|Ga0182037_10036369	All Organisms → cellular organisms → Bacteria → Proteobacteria	3181	Open in IMG/M
3300016445\|Ga0182038_11957382	Not Available	530	Open in IMG/M
3300018433\|Ga0066667_12033318	Not Available	529	Open in IMG/M
3300020006\|Ga0193735_1014709	All Organisms → cellular organisms → Bacteria	2454	Open in IMG/M
3300020579\|Ga0210407_11216174	Not Available	566	Open in IMG/M
3300021361\|Ga0213872_10336930	Not Available	621	Open in IMG/M
3300021401\|Ga0210393_10436591	Not Available	1068	Open in IMG/M
3300021402\|Ga0210385_10119325	Not Available	1860	Open in IMG/M
3300021420\|Ga0210394_10634217	Not Available	938	Open in IMG/M
3300021474\|Ga0210390_11556401	Not Available	522	Open in IMG/M
3300021560\|Ga0126371_10149802	All Organisms → cellular organisms → Bacteria → Proteobacteria	2393	Open in IMG/M
3300021560\|Ga0126371_10362404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylosarcina → Methylosarcina fibrata	1586	Open in IMG/M
3300022533\|Ga0242662_10191331	Not Available	640	Open in IMG/M
3300024179\|Ga0247695_1053589	Not Available	590	Open in IMG/M
3300024225\|Ga0224572_1071794	Not Available	640	Open in IMG/M
3300025898\|Ga0207692_10575952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	722	Open in IMG/M
3300025915\|Ga0207693_10065819	All Organisms → cellular organisms → Bacteria → Proteobacteria	2838	Open in IMG/M
3300025939\|Ga0207665_10027994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	3723	Open in IMG/M
3300026305\|Ga0209688_1115352	Not Available	509	Open in IMG/M
3300026322\|Ga0209687_1096375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium IMCC2047	961	Open in IMG/M
3300026538\|Ga0209056_10260956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1224	Open in IMG/M
3300026542\|Ga0209805_1318459	Not Available	590	Open in IMG/M
3300027069\|Ga0208859_1001598	All Organisms → cellular organisms → Bacteria	2201	Open in IMG/M
3300027610\|Ga0209528_1034840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1113	Open in IMG/M
3300027765\|Ga0209073_10098765	Not Available	1028	Open in IMG/M
3300027775\|Ga0209177_10239689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium IMCC2047	665	Open in IMG/M
3300027829\|Ga0209773_10138039	Not Available	1014	Open in IMG/M
3300027874\|Ga0209465_10227976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	930	Open in IMG/M
3300029636\|Ga0222749_10523660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	644	Open in IMG/M
3300029636\|Ga0222749_10769463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	527	Open in IMG/M
3300030740\|Ga0265460_10345190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1038	Open in IMG/M
3300031057\|Ga0170834_107375696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium IMCC2047	772	Open in IMG/M
3300031091\|Ga0308201_10252687	Not Available	608	Open in IMG/M
3300031128\|Ga0170823_14154622	Not Available	1401	Open in IMG/M
3300031546\|Ga0318538_10423967	All Organisms → cellular organisms → Bacteria → Proteobacteria	720	Open in IMG/M
3300031679\|Ga0318561_10575942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300031681\|Ga0318572_10957807	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300031713\|Ga0318496_10589124	Not Available	614	Open in IMG/M
3300031716\|Ga0310813_11353622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium IMCC2047	659	Open in IMG/M
3300031723\|Ga0318493_10013451	All Organisms → cellular organisms → Bacteria → Proteobacteria	3456	Open in IMG/M
3300031724\|Ga0318500_10388716	Not Available	693	Open in IMG/M
3300031736\|Ga0318501_10519158	Not Available	650	Open in IMG/M
3300031744\|Ga0306918_10001252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12476	Open in IMG/M
3300031747\|Ga0318502_10007552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4758	Open in IMG/M
3300031748\|Ga0318492_10261960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	895	Open in IMG/M
3300031777\|Ga0318543_10028730	All Organisms → cellular organisms → Bacteria → Proteobacteria	2145	Open in IMG/M
3300031777\|Ga0318543_10292816	Not Available	728	Open in IMG/M
3300031781\|Ga0318547_10197550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1200	Open in IMG/M
3300031797\|Ga0318550_10058087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1755	Open in IMG/M
3300031805\|Ga0318497_10371994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	798	Open in IMG/M
3300031819\|Ga0318568_10833759	Not Available	571	Open in IMG/M
3300031845\|Ga0318511_10457447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	588	Open in IMG/M
3300031879\|Ga0306919_10947304	Not Available	659	Open in IMG/M
3300031879\|Ga0306919_11073612	Not Available	614	Open in IMG/M
3300031890\|Ga0306925_12125168	Not Available	525	Open in IMG/M
3300031893\|Ga0318536_10200965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1014	Open in IMG/M
3300031910\|Ga0306923_10033149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5590	Open in IMG/M
3300031910\|Ga0306923_10608580	Not Available	1226	Open in IMG/M
3300031910\|Ga0306923_12531533	Not Available	505	Open in IMG/M
3300031912\|Ga0306921_10774690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1097	Open in IMG/M
3300031912\|Ga0306921_12148735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300031941\|Ga0310912_10010277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5879	Open in IMG/M
3300031942\|Ga0310916_10921850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300032010\|Ga0318569_10342196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	697	Open in IMG/M
3300032042\|Ga0318545_10234523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	658	Open in IMG/M
3300032044\|Ga0318558_10458101	Not Available	636	Open in IMG/M
3300032060\|Ga0318505_10256995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	823	Open in IMG/M
3300032063\|Ga0318504_10600676	Not Available	528	Open in IMG/M
3300032064\|Ga0318510_10543381	Not Available	506	Open in IMG/M
3300032065\|Ga0318513_10199561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	964	Open in IMG/M
3300032174\|Ga0307470_11594553	Not Available	546	Open in IMG/M
3300032205\|Ga0307472_102292597	Not Available	546	Open in IMG/M
3300032261\|Ga0306920_100252957	All Organisms → cellular organisms → Bacteria → Proteobacteria	2628	Open in IMG/M
3300033289\|Ga0310914_10500070	Not Available	1100	Open in IMG/M
3300033290\|Ga0318519_11020313	Not Available	514	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.90%
Host-Associated	Host-Associated	3.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.57%
Plants	Host-Associated → Plants	3.10%
Aquatic	Environmental → Aquatic	2.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.10%
Freshwater	Environmental → Aquatic → Freshwater	2.33%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.82%
Loam	Environmental → Terrestrial → Soil → Loam	7.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	44.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.43%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.33%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.33%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003351	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26346J50198_10260512	3300003351	Bog Forest Soil	YVLQNFPGEEVSLWVAPLLDAVAEAIGLLLSGAPDAFMSEVARCVAPPDLDAAGVSGQS*
Ga0062384_1011813431	3300004082	Bog Forest Soil	IRELVHPYVLQNFSAEEMRLWVAPLVDAVAETIPLLLDGMPDAFMSEVARRFAPPELDGDGETP*
Ga0062589_1002871102	3300004156	Soil	APDEARLIVAPLLDALTETFPLLLEGAPDAFMSEVARRFTPPDLNSE*
Ga0066688_108063641	3300005178	Soil	DEERLIVAPLLDAVAETVPLLLEGAPDAFMSEVARRFTPPDPAEEADEPK*
Ga0066671_100597313	3300005184	Soil	LVHPYVLQNFTPDEARLIVMPLLDAVTETFPLLLEGAPDAFMSEVARRFTPPDLDAEEQE
Ga0066388_1004310431	3300005332	Tropical Forest Soil	VQPYVLQNFTEDERTAWVEPLLAAIAETIPLLISGAPDAFMSEVARRSAPPNEETEDPAQP*
Ga0066388_1048128741	3300005332	Tropical Forest Soil	PDEERTLWVEPLLAAIAETIPLLISGAPDAFMSEVARRFSPPNEDAPEGPAQG*
Ga0066388_1062500972	3300005332	Tropical Forest Soil	QPYVLQNFPNVEMTEWVEPLLAAVAEAIPLLLSGAPDGFMSEVARRFAPRDPEVSDDLARP*
Ga0070667_1010789961	3300005367	Switchgrass Rhizosphere	HPYVLQNFPAEEMTGWVEPLVAAVAETIPLLLASDPAAFMSEVARRCAPPETDPPG*
Ga0066682_105634102	3300005450	Soil	KELVHPYVLQNFTPDEARLIVMPLLDALTETFPLLLEGAPDAFMSEVARRFTPPDLDAEEQA*
Ga0066687_105693771	3300005454	Soil	YVLQNFTPDEARLIVTPLLDALTETFPLLLEGAPDAFMSEVARRFTPPDLDAEEQE*
Ga0070733_109861922	3300005541	Surface Soil	ADEMRLWVAPLIDAVAETIPLLLGGMPDAFMSEVARLAPAPPDLDAEV*
Ga0066702_107744042	3300005575	Soil	VLQNFMADEERLIVAPLLDAVAETIPLLLEGAPDAFMSEIARRFAPPDLDAEDPA*
Ga0066702_108180001	3300005575	Soil	VLQNFTPDEARLIVMPLLDAVTETFPLLLEGAPDAFMSEVARRFTPPDLDAEEDKAGGGAG*
Ga0066708_100735671	3300005576	Soil	QNFTPDEARLIVMPLLDAVTETFPLLLEGAPDAFMSEVARRFTPPDLDAEEQE*
Ga0066903_1041577583	3300005764	Tropical Forest Soil	PYVLQNFPDGERTLWVEPLLSAIAETIPLLISGAPDAFMSEVARRFSPPNGDAPEGPAQG
Ga0066696_110731702	3300006032	Soil	YVLQNFSGEELTGWVEPLLGAVAETIPLLVADAPDAFMSEVARRFAPPDDSAQAGDAQS*
Ga0066665_109180972	3300006796	Soil	KELVHPYVLQNFTPDEARLIVMPLLDVVTETFPLLLEGAPDAFMSEVARRFTPPDLDAEEQE*
Ga0066659_102921112	3300006797	Soil	VHPYVLMNFSQEEMRQWVEPLVDAVAETIPWLLEGAPDAFMSEVARRFTPPEPADDEGAP
Ga0066710_1022357272	3300009012	Grasslands Soil	VQPYVLQNFSGEELTGWVEPLLGAVAETMPLLLSGAPDAFMSEVARRFAPPDAGETADPAQA
Ga0066710_1033913742	3300009012	Grasslands Soil	GIRELVHPYVLQNFTADEERLIVAPLLDALAEAVPLLLEGAPEAFMSEVARRFTPPDLDADDKAGDEPK
Ga0099829_113607202	3300009038	Vadose Zone Soil	FTAEEMRQWVEPLVEAVAETIPLLLEGAPDAFMSEVARRFTPPEVDDDEETP*
Ga0099827_102748171	3300009090	Vadose Zone Soil	PYVLMNFSAEEIQQWVVPLVDAVAETVPWLLEGAPDAFMSEVARRFTPPEPDDDEETP*
Ga0099792_107159182	3300009143	Vadose Zone Soil	ELVQPYVLQNFSGEELTGWVEPLLGAVAEAVPLLVSGAPDAFMSEVARRFAPPDNGAEPGLAQS*
Ga0126311_114599922	3300010045	Serpentine Soil	VLQNFGADEEKLIVAPLLDAVAETMPLLLEGAPDAIMSEVARRFAPPDLDTDEPP*
Ga0126378_104955494	3300010361	Tropical Forest Soil	LQNFADEERTLWVESLLAAIAETIPLLIAGAPDAFMSEVARRFSLPDRDAPEEPAQG*
Ga0126377_132448432	3300010362	Tropical Forest Soil	LVQPYVLQNFSSEEVRLWVVPLLDAVAETIGLLLTGAPDAFMSEVARRFTPPEMGAVENLGRSELD*
Ga0126379_100821511	3300010366	Tropical Forest Soil	LQNFPREEVDEWVDPLLDAIAETIPLFLSGALDAFMSEVARRTAPPQSNAADTPTQPP*
Ga0126381_1001021857	3300010376	Tropical Forest Soil	LQNFPDEERTLWVEPLLAAIAETIPLLVSGAPDAFMSEVARRFSPPDTGMPEASAQG*
Ga0126381_1013729921	3300010376	Tropical Forest Soil	DEERTLWVEPLLAAIAETIPLLISGAPDAFMSEVARRFSPPNDDTFVPP*
Ga0126381_1020999961	3300010376	Tropical Forest Soil	ELVQPYVVQNFPGEELTNWVEPLLDAIAETVPLLLNGAPAAFMSEVARRCAPPGAAAAEV
Ga0134126_101971904	3300010396	Terrestrial Soil	HPYVLQNFAPDEARLIVAPLLDALTETFPLLLEGAPDAFMSEVARRFTPPDLNSE*
Ga0126383_116378132	3300010398	Tropical Forest Soil	LVHPYVLQNFSSEELTLWVAPLLEAVAETIGFLLSSAPDAFMSEVARRFAPPEPRAPAIFGQSQTD*
Ga0126383_126687181	3300010398	Tropical Forest Soil	NFPSEEVSHWVAPLLDAVAETIGLLLAGAPAAFMSEVARRVAPPELEEASA*
Ga0126383_131860572	3300010398	Tropical Forest Soil	TLWVEPLLAAIAETIPLLVSGAPDAFMSEVARRFSPPDTGMPEASAQG*
Ga0137393_104964712	3300011271	Vadose Zone Soil	QNSTADEERLIVAPLLDAVAETVPLLLEGAPDAFMSEVARRFTPPDLDEEEQE*
Ga0137393_110631361	3300011271	Vadose Zone Soil	PYVLQNFPAEEIRLWVEPLADAVAETIPWLLEGSPDAFMSEVARRVAPPEFEDDEETP*
Ga0137382_113275082	3300012200	Vadose Zone Soil	VHPYVLQNFTADEERLIVVPLLDAVAETIPLLLEGAPDAFMSEVARRFTPPDLDAEERQ*
Ga0137362_113361101	3300012205	Vadose Zone Soil	PGIRELVHPYVLMNFSAEEMRQWVVPLVEAVAETIPVLLEGTPDAFMSEVARRFTPPEPDDDEATP*
Ga0137377_117779152	3300012211	Vadose Zone Soil	FTADEERLIVAPLLDAVAETVPLLLEGAPDAFMSEVARRFTPPDLDEEERQ*
Ga0137366_109121761	3300012354	Vadose Zone Soil	DEDRLIVAPLLDAVAETVPLLLEGAPEAFMSEVARRFTPPDPDEAERP*
Ga0137358_104191991	3300012582	Vadose Zone Soil	PYVLQNFPSEEVSLWIVPLLEAVAETIGLLLSGAPDAFMSEVARRFTPPDTNPAGVFGRPEPD*
Ga0137413_110060521	3300012924	Vadose Zone Soil	KELVHPYVLQNFTPDEARLIVTPLLDAVTETFPLLLEGAPDAFMSEVARRFTPPDLDAEEQE*
Ga0126369_115889622	3300012971	Tropical Forest Soil	LQIFPDEERTVGVEPLVAAIAETIPLLISSAPDGFMSEVARQFSPPNEDAPEGPAEG*
Ga0164305_113620771	3300012989	Soil	QPYVLQNFSGEELTGWVEPLLGAVAETVPLLLSGAPDAFMSEVARRVAPPDEGPAQS*
Ga0157373_102950641	3300013100	Corn Rhizosphere	KELVHPYVLQNFAPDEARLIVAPLLDALTETFPLLLEGAPDAFMSEVARRFTPPDLNSG*
Ga0120111_10854392	3300013764	Permafrost	YVLMNFTAEEMRLWVVPLVDAVAETTPLLVEGAPDAFMSEVARRFAPPEPDDDEETP*
Ga0137409_115368611	3300015245	Vadose Zone Soil	VHPYVLMNFGAEEMQQWVEPLVDAVAESIPWLLEGAPDAFMSEVARRFAPPELDDDEETP
Ga0134072_101540162	3300015357	Grasslands Soil	ELVHPYVLQNFTPDEARLIVTPLLDALTETFPLLLEGAPDAFMSEMARRFTPPDLDAEEQE*
Ga0182041_120136551	3300016294	Soil	QPYVLQNFPGEEVTLWVAPLLDAVAETIGLLLSGAPDAFMSEVARRFAPPDLDAAVSSPQ
Ga0182035_107425441	3300016341	Soil	RTAWVEPLLAAIGETLPLLISGAPDAFMSEVARRFAPPNEETAQDPAQP
Ga0182032_118708521	3300016357	Soil	QNFPSEEVTLWVAPLLDAVAETIGLLLSGAPDAFMSEVARRFAPPDLDAAVSSPQS
Ga0182040_100198941	3300016387	Soil	LGEEVTGWVEPLLDAVAETIPLILVGAPDAFMSEVARRFSPPDASTPEASA
Ga0182037_100363694	3300016404	Soil	QPYVLQNFSSEEVTLWVAPLLDAVAETIGLLLSDAPDAFMSEVARRFAPPDLEAADSSAQ
Ga0182038_119573822	3300016445	Soil	LQNFPGEEVTGWVEPLLDAVAETIPLILDGAPDAFMSEVARRFSPPDASTPEASA
Ga0066667_120333182	3300018433	Grasslands Soil	VLQNFPSEEVKLWVEPLVGAVAETIPVLLGGDPPGFMSEVARRFAPPELDAEEPP
Ga0193735_10147091	3300020006	Soil	TPDEARLIVMPLLDAVTETFPLLLEGAPDAFMSEVARRFTPPDLDADEQE
Ga0210407_112161742	3300020579	Soil	FPSEEVTSWVAPLLDAVAETIGLLLTGTPDAFMSEVARRFSPPDLDAADISGQS
Ga0213872_103369301	3300021361	Rhizosphere	FPSEEVSHWVAPLLDVVAETIGLLLTGAPDAFMSEVARRFAPPDLDPVDASSQS
Ga0210393_104365911	3300021401	Soil	LQNFSGEELTGWVEPLLGAAAEAVPLLVSGAPDAFMSEVARRFAPPDNGAEPGLAQS
Ga0210385_101193252	3300021402	Soil	PYVLQNFPTDELTDWVEPLTEAVAETIGLLLSGAPDGFMSEVARRLAPPAEATPAATLLR
Ga0210394_106342172	3300021420	Soil	EIGDWVAPLIDAVAETAPLLLSGLPEAFMSEVARRLAPPAPDAPAATPLRP
Ga0210390_115564012	3300021474	Soil	GEELTGWVEPLLGAAAEAVPLLVSGAPDAFMSEVARRFAPPDNGAEPGLAQS
Ga0126371_101498023	3300021560	Tropical Forest Soil	FPREELTAWVEPLLAAVADTISLLVSGAPDAFMSEVARRFSPPREEPQSEQC
Ga0126371_103624043	3300021560	Tropical Forest Soil	DERTAWVEPLLAAVADMIPLLISGAPDAFMSEVARRFTPPIDQTPEDPAQP
Ga0242662_101913312	3300022533	Soil	LVQPYVLQNFPSEEVTSWVAPLLDAVAETIGLLLTGTPDAFMSEVARRFSPPDLDAADISGQS
Ga0247695_10535891	3300024179	Soil	LVHPYVLQNFAPDEARLIVAPLLDALTETFPLLLEGAPDAFMSEVARRFTPPDLNSG
Ga0224572_10717941	3300024225	Rhizosphere	VLQNFFPEEVTEWVAPLIDAVAETVPLLLSGAPDAFMSEVARRLAPPEATAATAASP
Ga0207692_105759521	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	QNFSGEELTGWVEPLLGAAAEAVPLLVSGAPDAFMSEVARRFAPPNDGPEPVLAQS
Ga0207693_100658191	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	QNFPGEELTVWVEPLLSAVAETIPLLVSGAPDAFMSEVARRFAPPNDGPEPVLAQS
Ga0207665_100279941	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	AAPDEARLIVAPLLDALTETFPLLLEGAPDAFMSEVARRFTPPDLNSE
Ga0209688_11153522	3300026305	Soil	KELVHPYVLQNFTPDEARLIVTPLLDALTETFPLLLEGAPDAFMSEVARRFTPPDLDAEEQE
Ga0209687_10963752	3300026322	Soil	YVLQNFTPDEARLIVTPLLDALTETFPLLLEGAPDAFMSEVARRFTPPDLDAEEQE
Ga0209056_102609561	3300026538	Soil	VLQNFSGAEVTGWVEPLIDAVAETIPLLLTGTPEAFMSEVARRFAPPDAIAADGFEKS
Ga0209805_13184592	3300026542	Soil	ELVQPHVLQNFSNEEVSLWVVPLLGAVAETIELLVTGVPDAFMSEVARRFTPPDMNAAEILGRSKPD
Ga0208859_10015981	3300027069	Forest Soil	QPYVLQNFSGEELTGWVEPLLGAVAEAVPLLVSGAPDAFMSEVARRFAPPDNGAEPGLAQ
Ga0209528_10348401	3300027610	Forest Soil	SGEELTGWVEPLLGAVAETVPLLLSGAPDAFMSEVARRGAPPDEGPAQS
Ga0209073_100987652	3300027765	Agricultural Soil	YVLQNFSGEELTGWVEPLLGAVTETIALLLCGAPDAFMSEVARRFTPRDLNSE
Ga0209177_102396892	3300027775	Agricultural Soil	ELVHPYVLQNFAPDETRLIVAPLLDALTETFPLLLEGAPDAFMSEVARRFTPPDLNSG
Ga0209773_101380392	3300027829	Bog Forest Soil	LQNFSGEELTGWVEPLLSAVAETIPLLVSDAPDAFMSEVARRFAPPDESAQAGDAQS
Ga0209465_102279762	3300027874	Tropical Forest Soil	NFPDEERTLWVEPLLAAIAETIPLLVSGAPDAFMSEVARRFSPPDTGMPEASAQG
Ga0209488_100311081	3300027903	Vadose Zone Soil	PDEARLIVMPLLDAVTETFPLLLEGAPDAFMSEVARRFTPPDLDAEEQA
Ga0222749_105236601	3300029636	Soil	LVQPYVLQNFSVGELIGWVEPLLEAVAETVPLLLSGTPDAFMSEVARRVAPPE
Ga0222749_107694631	3300029636	Soil	ELVQPYVLQNFTADEITEWVGPLIDAMAETIPLLLAGDAPAFMSEVARRFTPPEPPPDLGNGGDP
Ga0265460_103451902	3300030740	Soil	QNFFLEEVTEWVAPLIDAVAETVPLLLSGTPDAFMSEVARRLAPPEATAATAASP
Ga0170834_1073756962	3300031057	Forest Soil	PYVLQNFTADEERLIVPPLLDAVAETIPLLLEGAPDAFMSEVARRFAPPDLDADEPP
Ga0308201_102526871	3300031091	Soil	NFSGEELTGWVEPLLDAVAETIPLLVSGAPDAFMSEVARRFAPPDAGAADI
Ga0170823_141546222	3300031128	Forest Soil	SEEVTSWVAPLLDAVAETIGLLLTGTPDAFMSEVARRFSPPDLDAADTSSQS
Ga0318538_104239671	3300031546	Soil	FTEDERTAWVEPLLAAIGETIPLLISGAPDAFMSEVARRFAPPNEETAQDPAQP
Ga0318561_105759421	3300031679	Soil	PYVLQNLPGEELSGWVEPLLGAIAETMPFLVRGAPEAFMSEVARRFAPPDARTAEDLA
Ga0318572_109578071	3300031681	Soil	TEDERTAWVEPLLAAIGETIPLLISGAPDAFMSEVARRFAPPNDRTSEDPAQL
Ga0318496_105891241	3300031713	Soil	PYVLQNFSSEEVTLWVAPLLDAVAETIGLLLSGAPDAFMSEVARRFAPPDLEAADSSAQS
Ga0310813_113536222	3300031716	Soil	FAPDEARLIVAPLLDALTETFPLLLEGAPDAFMSETARRFTPPDLDVKEED
Ga0318493_100134511	3300031723	Soil	PYVLQNFSSEEVTAWVAPLLEAVAGTIGLLLSGAPDAFMSEVARRFAPPDLDAADSPAQS
Ga0318500_103887161	3300031724	Soil	VQPYVLQNFSSEEVTAWVAPLLEAVAGTIGLLLSGAPDAFMSEVARRFAPPDLDAADSPAQS
Ga0318501_105191581	3300031736	Soil	NFSREEVSLWVAPLLEAVAETIGLLLSGAPDAFMSEVARRFAPPDLEVADSSP
Ga0306918_1000125213	3300031744	Soil	NFPDEERTLWVEPLLAAVAETIPLLVSGAPDAFMSEVARRFSPPNDDTIVPP
Ga0318502_100075525	3300031747	Soil	PDEERTLWVEPLLAAVAETIPLLVSGAPDAFMSEVARRFSPPNDDTIVPP
Ga0318492_102619601	3300031748	Soil	KELVQPYVLQNFSSEEVTLWVAPLLDAVAETIGLLLTGTPDAFMSEVARRFAPSDLDAAGVPGQS
Ga0318543_100287301	3300031777	Soil	NFSSEEVTLWVAPLLEAVAETIGLLLSGAPDAFMSEVARRFAPPDLDPAESSAES
Ga0318543_102928161	3300031777	Soil	FPDEERTLWVEPLLAAVAETIPLLVSGAPDAFMSEVARRFSPPNDDTIVPP
Ga0318547_101975502	3300031781	Soil	QPYVLQNFSSEEVSLWVAPLLEAVAETIGLLLSGAPDAFMSEVARRFAPPDLEVADSSP
Ga0318550_100580873	3300031797	Soil	PYVLQNFSSEEVSLWVAPLLEAVAETIGLLLSGAPDAFMSEVARRFAPPDLEVADSSP
Ga0318497_103719941	3300031805	Soil	VLQNFSSEEVTAWVAPLLEAVAGTIGLLLSGAPDAFMSEVARRFAPPDLDAADSPAQS
Ga0318568_108337592	3300031819	Soil	VLQNFPNEEVTQWVAPLLEAVAETIGLLLSGAPDAFMSEVARRFAPPDLEAADSSSPA
Ga0318511_104574472	3300031845	Soil	PYVLQNFPSEEVTLWVAPLLEAVAETIGLLLSGAPEAFMSEVARRFAPPDPDAADSSGQS
Ga0306919_109473041	3300031879	Soil	LQNFPDEEVKLWVEPLVGAVAETVPLLLGGDPAAFMSEVARRFAPPDIDAEKPG
Ga0306919_110736122	3300031879	Soil	FPSEEVTLWVAPLLEAVAETIGLLLSGAPDAFMSEVARRFTPPDRDAAHRSDQS
Ga0306925_121251682	3300031890	Soil	FPSEEVTLWVAPLLEAVAETIGLLLSGAPDAFMSEVARRFAPPDPDAADPSDQS
Ga0318536_102009652	3300031893	Soil	VLQNFSSEEVTLWVAPLLDAVAETIGLLLSGAPDAFMSEVARRFAPPDLEAADSSAQS
Ga0306923_100331491	3300031910	Soil	LQNFPDEERTLWVEPLLAAVAETIPLLVSGAPDAFMSEVARRFSPPNDDTIVPP
Ga0306923_106085801	3300031910	Soil	NFPGEERTLWVEPLLAAIAETIPLLISGAPDAFMSEVARRFSLPHADTIVSP
Ga0306923_125315331	3300031910	Soil	SEEVTLWVAPLLEAVAETIGLLLSGAPDAFMSEVARRFAPPDPDAADPSDQS
Ga0306921_107746902	3300031912	Soil	FPGEEVIGWVEPLLDAVAETIPLILDGAPDAFMSEVARRFSPPDASTPDASA
Ga0306921_121487352	3300031912	Soil	VQPYAVQNFTDEERTLWVEPLLAAIAEMIPLLISGAPDAFMSEVARRFSLPHADTIVSP
Ga0310912_100102771	3300031941	Soil	LVQPYVLQNFSSEEVTLWVAPLLDAVAETIGLLLTGTPDAFMSEVARRFAPSDLDAAGVPGQS
Ga0310916_109218501	3300031942	Soil	ELVQPYVLQNFSSEEVRLWVAPLLEAVAATIGLLLSGAPDAFMSEVARRFAPPDLEAADSSPQT
Ga0318569_103421962	3300032010	Soil	PYVLQNFPSEEVTSWVAPLLEAVAETIGLLLSGAPDAFMSEVARRFVPPDPDAADRSDQS
Ga0318545_102345232	3300032042	Soil	VQPYVLQNFSSEEVTLWVAPLLDAVAETIGLLLTGTPDAFMSEVARRFAPSDLDAAGVPGQS
Ga0318558_104581011	3300032044	Soil	EEVTLWVAPLLEAVAETIGLLLSGAPDAFMSEVARRFTPPDRDAAHRSDQS
Ga0318505_102569952	3300032060	Soil	PYVLQNFSSEEVTLWVAPLLDAVAETIGLLLTGTPDAFMSEVARRFAPSDLDAAGVPGQS
Ga0318504_106006762	3300032063	Soil	PYVLQNFSSEEVTLWVAPLLDAVAETIGLLLSDAPDAFMSEVARRFAPPDLEAADSSAQS
Ga0318510_105433811	3300032064	Soil	PYVLQNFPDEERTLWVEPLLAAIAETIPLLISGSPDAFMSEVARRFSPPNDDTIVSP
Ga0318513_101995611	3300032065	Soil	VEPLLAAIAETIPLLISGSPDAFMSEVARRFSPPNDDTIVSP
Ga0307470_115945532	3300032174	Hardwood Forest Soil	LQNFSGEELSGWVEPLLSAVAETIPLLVSGAPDAFMSEVARRFAPPDEDTAPGLVRS
Ga0307472_1022925972	3300032205	Hardwood Forest Soil	YVLQNFSGEELTGWVEPLLGAVAEAVPLLVSGAPDAFMSEVARRFAPPDNGAEPGLAQS
Ga0306920_1002529574	3300032261	Soil	LVQPYVLQNFPSEEVTLWVAPLLEAVAETIGLLLSGAPDAFMSEVARRFTPPDRDAAHRSDQS
Ga0310914_105000701	3300033289	Soil	SEEVALWVAPLLEAVAETIGLLLSGAPDAFMSEVARRFAPPDLDAADGSGQS
Ga0318519_110203132	3300033290	Soil	PYVLQNFPSEEVTLWVAPLLEAVAETIGLLLSGAPDAFMSEVARRFTPPDRDAADRSDQS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063517

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences