Metagenome Family F063514

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063514
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	72 residues
Representative Sequence	MSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF
Number of Associated Samples	89
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	40.48 %
% of genes near scaffold ends (potentially truncated)	37.98 %
% of genes from short scaffolds (< 2000 bps)	88.37 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.473 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (51.163 % of family members)
Environment Ontology (ENVO)	Unclassified (76.744 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (81.395 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 75.00% β-sheet: 0.00% Coil/Unstructured: 25.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00589	Phage_integrase	7.75
PF03602	Cons_hypoth95	3.88
PF07508	Recombinase	3.10
PF10711	DUF2513	2.33
PF14355	Abi_C	2.33
PF00072	Response_reg	1.55
PF13510	Fer2_4	0.78
PF13354	Beta-lactamase2	0.78
PF01527	HTH_Tnp_1	0.78
PF02518	HATPase_c	0.78
PF13411	MerR_1	0.78
PF07786	HGSNAT_cat	0.78
PF00069	Pkinase	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0742	16S rRNA G966 N2-methylase RsmD	Translation, ribosomal structure and biogenesis [J]	3.88
COG1092	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	Translation, ribosomal structure and biogenesis [J]	3.88
COG2242	Precorrin-6B methylase 2	Coenzyme transport and metabolism [H]	3.88
COG2265	tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family	Translation, ribosomal structure and biogenesis [J]	3.88
COG2890	Methylase of polypeptide chain release factors	Translation, ribosomal structure and biogenesis [J]	3.88
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.10
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	3.10
COG3503	Uncharacterized membrane protein, DUF1624 family	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.47 %
Unclassified	root	N/A	8.53 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.47 %
Unclassified	root	N/A	8.53 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.47 %
Unclassified	root	N/A	8.53 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	86.05 %
Unclassified	root	N/A	8.53 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	75.97 %
Unclassified	root	N/A	8.53 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	75.97 %
Unclassified	root	N/A	8.53 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	75.97 %
Unclassified	root	N/A	8.53 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	75.97 %
Unclassified	root	N/A	8.53 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.78 %
Alloacidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	75.97 %
Unclassified	root	N/A	8.53 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	0.78 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10031738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1860	Open in IMG/M
3300002558\|JGI25385J37094_10086129	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	962	Open in IMG/M
3300002908\|JGI25382J43887_10275817	Not Available	756	Open in IMG/M
3300002909\|JGI25388J43891_1045797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300002911\|JGI25390J43892_10126915	Not Available	585	Open in IMG/M
3300005166\|Ga0066674_10323577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300005171\|Ga0066677_10063881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1875	Open in IMG/M
3300005172\|Ga0066683_10403457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300005172\|Ga0066683_10445671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300005172\|Ga0066683_10708842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300005175\|Ga0066673_10183580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1184	Open in IMG/M
3300005175\|Ga0066673_10264102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999	Open in IMG/M
3300005176\|Ga0066679_10119732	All Organisms → cellular organisms → Bacteria → Acidobacteria	1621	Open in IMG/M
3300005177\|Ga0066690_10414789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	913	Open in IMG/M
3300005178\|Ga0066688_10151624	Not Available	1452	Open in IMG/M
3300005178\|Ga0066688_10160299	All Organisms → cellular organisms → Bacteria → Acidobacteria	1413	Open in IMG/M
3300005178\|Ga0066688_10256525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1120	Open in IMG/M
3300005179\|Ga0066684_10305952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1057	Open in IMG/M
3300005179\|Ga0066684_10699695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300005180\|Ga0066685_10747079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300005181\|Ga0066678_10424141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	883	Open in IMG/M
3300005184\|Ga0066671_10445885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	830	Open in IMG/M
3300005186\|Ga0066676_10267461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1121	Open in IMG/M
3300005187\|Ga0066675_10097856	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1930	Open in IMG/M
3300005187\|Ga0066675_10112816	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1814	Open in IMG/M
3300005187\|Ga0066675_10212087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1366	Open in IMG/M
3300005446\|Ga0066686_10186003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1387	Open in IMG/M
3300005447\|Ga0066689_10247588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1095	Open in IMG/M
3300005450\|Ga0066682_10149491	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300005450\|Ga0066682_10234238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1180	Open in IMG/M
3300005450\|Ga0066682_10639509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300005451\|Ga0066681_10473372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	770	Open in IMG/M
3300005451\|Ga0066681_10545085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300005454\|Ga0066687_10026814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2495	Open in IMG/M
3300005454\|Ga0066687_10713125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300005554\|Ga0066661_10334959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	928	Open in IMG/M
3300005556\|Ga0066707_10391434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M
3300005558\|Ga0066698_10455246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300005558\|Ga0066698_10757559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300005559\|Ga0066700_10916413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300005566\|Ga0066693_10099372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1048	Open in IMG/M
3300005569\|Ga0066705_10866870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300005574\|Ga0066694_10266416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300005574\|Ga0066694_10333442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300005574\|Ga0066694_10340368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300005587\|Ga0066654_10480326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300005598\|Ga0066706_10252038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1374	Open in IMG/M
3300006034\|Ga0066656_10803246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300006796\|Ga0066665_11538576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300006796\|Ga0066665_11646064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300006800\|Ga0066660_11354262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300009012\|Ga0066710_104267702	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300009137\|Ga0066709_100503430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1706	Open in IMG/M
3300009137\|Ga0066709_100525622	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1671	Open in IMG/M
3300009137\|Ga0066709_104480899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300010320\|Ga0134109_10017281	All Organisms → cellular organisms → Bacteria	2175	Open in IMG/M
3300010320\|Ga0134109_10092099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1047	Open in IMG/M
3300010321\|Ga0134067_10065917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1191	Open in IMG/M
3300010322\|Ga0134084_10202935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300010323\|Ga0134086_10345302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300010329\|Ga0134111_10028844	All Organisms → cellular organisms → Bacteria → Acidobacteria	1925	Open in IMG/M
3300010333\|Ga0134080_10250307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300010337\|Ga0134062_10810940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300012189\|Ga0137388_10250678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1611	Open in IMG/M
3300012198\|Ga0137364_11306580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300012199\|Ga0137383_10247526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1306	Open in IMG/M
3300012199\|Ga0137383_10698562	Not Available	741	Open in IMG/M
3300012201\|Ga0137365_10108124	All Organisms → cellular organisms → Bacteria → Acidobacteria	2092	Open in IMG/M
3300012206\|Ga0137380_10108613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2535	Open in IMG/M
3300012208\|Ga0137376_10233492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1594	Open in IMG/M
3300012208\|Ga0137376_10815737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300012208\|Ga0137376_10990558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300012208\|Ga0137376_11433664	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300012208\|Ga0137376_11715297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300012209\|Ga0137379_10780627	Not Available	860	Open in IMG/M
3300012210\|Ga0137378_10846285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300012211\|Ga0137377_10652371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300012211\|Ga0137377_10683104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	962	Open in IMG/M
3300012357\|Ga0137384_10201721	Not Available	1664	Open in IMG/M
3300012357\|Ga0137384_10379327	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300012362\|Ga0137361_11076190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300012582\|Ga0137358_10945526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300012923\|Ga0137359_10410153	All Organisms → cellular organisms → Bacteria → Acidobacteria	1201	Open in IMG/M
3300012923\|Ga0137359_10801984	Not Available	816	Open in IMG/M
3300012975\|Ga0134110_10048653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1671	Open in IMG/M
3300014154\|Ga0134075_10178530	Not Available	911	Open in IMG/M
3300015356\|Ga0134073_10227675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300017657\|Ga0134074_1132946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300018431\|Ga0066655_10162306	All Organisms → cellular organisms → Bacteria → Acidobacteria	1341	Open in IMG/M
3300018431\|Ga0066655_10645107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300018433\|Ga0066667_11781844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300018468\|Ga0066662_11877025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300018468\|Ga0066662_11946799	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300018482\|Ga0066669_10104511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1976	Open in IMG/M
3300018482\|Ga0066669_10147144	All Organisms → cellular organisms → Bacteria → Acidobacteria	1727	Open in IMG/M
3300025915\|Ga0207693_10117710	All Organisms → cellular organisms → Bacteria	2086	Open in IMG/M
3300026277\|Ga0209350_1016090	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2343	Open in IMG/M
3300026295\|Ga0209234_1044055	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1697	Open in IMG/M
3300026296\|Ga0209235_1139601	All Organisms → cellular organisms → Bacteria → Acidobacteria	985	Open in IMG/M
3300026297\|Ga0209237_1106536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1216	Open in IMG/M
3300026301\|Ga0209238_1140507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300026309\|Ga0209055_1070832	All Organisms → cellular organisms → Bacteria → Acidobacteria	1455	Open in IMG/M
3300026312\|Ga0209153_1207030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300026315\|Ga0209686_1110771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300026315\|Ga0209686_1186252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300026316\|Ga0209155_1049556	All Organisms → cellular organisms → Bacteria	1637	Open in IMG/M
3300026317\|Ga0209154_1022130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2975	Open in IMG/M
3300026323\|Ga0209472_1064590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1527	Open in IMG/M
3300026324\|Ga0209470_1202717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300026327\|Ga0209266_1058449	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1855	Open in IMG/M
3300026329\|Ga0209375_1082157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1491	Open in IMG/M
3300026329\|Ga0209375_1172323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300026330\|Ga0209473_1094550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1251	Open in IMG/M
3300026330\|Ga0209473_1184667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300026342\|Ga0209057_1023722	All Organisms → cellular organisms → Bacteria	3392	Open in IMG/M
3300026342\|Ga0209057_1133814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	877	Open in IMG/M
3300026523\|Ga0209808_1023939	All Organisms → cellular organisms → Bacteria	3000	Open in IMG/M
3300026523\|Ga0209808_1067607	All Organisms → cellular organisms → Bacteria → Acidobacteria	1571	Open in IMG/M
3300026528\|Ga0209378_1035653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2565	Open in IMG/M
3300026530\|Ga0209807_1078755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1463	Open in IMG/M
3300026532\|Ga0209160_1196248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300026536\|Ga0209058_1063360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2024	Open in IMG/M
3300026538\|Ga0209056_10074916	All Organisms → cellular organisms → Bacteria	2882	Open in IMG/M
3300026538\|Ga0209056_10152150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1770	Open in IMG/M
3300026547\|Ga0209156_10283132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300026547\|Ga0209156_10374936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.57%
Loam	Environmental → Terrestrial → Soil → Loam	5.43%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	67.44%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.13%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	51.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	16.28%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.30%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100317382	3300002558	Grasslands Soil	MSTKPQPSMDAERTKKLAVELSALLRQQFEALEDSTFIPMDEEKAKAYEQRSERIAELNTMLGQCEHRSRLRWDYGR*
JGI25385J37094_100861292	3300002558	Grasslands Soil	MSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF*
JGI25382J43887_102758171	3300002908	Grasslands Soil	MDAERTRELAVELAGLLRQQLEALQEATFIPMNEEKAEAYERRSQRIAELKAMLGHASCF
JGI25388J43891_10457972	3300002909	Grasslands Soil	AERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF*
JGI25390J43892_101269152	3300002911	Grasslands Soil	LWHMSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF*
Ga0066674_103235772	3300005166	Soil	MSTKPPPSIDAERTKELSLELSGLLRQQLEALEDSAYILMDEKKAEAYEKRSERIAELKAMLGHRSCF*
Ga0066677_100638813	3300005171	Soil	MGTKPQLSISLSARWVKELSLELAALLREQIEALEDSGYILMDEKKAEAYEKRSERIAELKAMLGHRSCF*
Ga0066683_104034572	3300005172	Soil	AKYIMYCIEQSRGRFVACSGILWHMSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF*
Ga0066683_104456712	3300005172	Soil	MYCIERSRDGFVVCAGILWHMSTKPQPSIDAERTKKLAVELSGLLRQQLEALEDSGYILMDEEKAEAYEKRSERIAELKAMLGHRSCF*
Ga0066683_107088421	3300005172	Soil	WHMSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRVCF*
Ga0066673_101835802	3300005175	Soil	MSTKPQPSMDAERTRELAVELAGLLRQQLEALQEATFIPMNEEKAEAYERRSQRIAELKAMLGHASCF*
Ga0066673_102641023	3300005175	Soil	MSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEKKAEAYEKRSERIAELKAMLGHRSCF*
Ga0066679_101197325	3300005176	Soil	MMILLWHMSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF*
Ga0066690_104147892	3300005177	Soil	MGTKPQLSISLSARRVKELSLELAALLREQIEALEDSGYILMDEKKAEAYEKRSERIAELKAMLGHRSCF*
Ga0066688_101516241	3300005178	Soil	LAVELAGLLRQQLEALQEATFIPMNEEKAEAYERRSQRIAELKAMLGHASCF*
Ga0066688_101602995	3300005178	Soil	MILLWHMSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAML
Ga0066688_102565254	3300005178	Soil	MSTKPQPSIDAERAKKLAVELSVLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAML
Ga0066684_103059521	3300005179	Soil	MYCIEQSRGRFVACSGILWHMSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHR
Ga0066684_106996951	3300005179	Soil	MYCIERSWDGFVACSGMILLWHMSTKPPPSIDAERTKELSFELSGLLRQQLEALEDSGYILMDEKKADAYEKRSERIAELKAMLGHPVAFSLQ*
Ga0066685_107470791	3300005180	Soil	AKYIMYCIEQSRGRFVACSGILWHMSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRVCF*
Ga0066678_104241412	3300005181	Soil	MSTKPQPSIDAERAKELAVELSELLRQQLEALEDSAYILMDEEEVEAYEQRSKRIAELKAMLGHRSCF*
Ga0066671_104458851	3300005184	Soil	MIPLWHMSTKPPPSIDAERTKELSLELSGLLRQQLEALEDSAYILMDEKKAEAYEKRSERIAELKAMLGHRSCF*
Ga0066676_102674612	3300005186	Soil	MSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRVCF*
Ga0066675_100978564	3300005187	Soil	MYCIEQSRGRFVACSGILWHMSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRVCF*
Ga0066675_101128163	3300005187	Soil	MSTKPQPSIDAERAQKLAVELSGLLRQQLEALEDSAYILMDEERVEAYEQRSKRIAELKAMLGHRSCF*
Ga0066675_102120872	3300005187	Soil	MYTKPQLSIALSAERAKKLSLELSGLLRQQLEALEDSGYILMDEKKAEAYEKRSERIAELKAMLGHRSCF*
Ga0066686_101860031	3300005446	Soil	MYCIEQSQGRFVACSGILWHMSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF*
Ga0066689_102475881	3300005447	Soil	MYCIERSWDGFVACSGMILLWHMSTKPPPSIDAERTKELSLELSGLLRQQLEALEDSGYILMDEKKAEAYEKRSERIAEL
Ga0066682_101494911	3300005450	Soil	MSTKPPPSIDAELTKELSLELSGLLRQQLEALEDSAYILMDEKKAEAYEKRSERIAELKAMLGHRSCF*
Ga0066682_102342383	3300005450	Soil	GRFVACSGILWHMSTKPQTSIDAERAKKLAVELAGLLRQQLEALEDSAYILMDEEKVEAYEQRSNRIAELKAMLGHRSCF*
Ga0066682_106395092	3300005450	Soil	MYTKPQLSIALSAERAKKLSLELSGLLRQQLETLEDSAYILMDEEKVEAYEQRSKRIAELKAMLG
Ga0066681_104733722	3300005451	Soil	MSTKPPPSIDAELTKALEDSAYILMDEKKAEAYEKRSERIAELKAMLGHRSCF*
Ga0066681_105450852	3300005451	Soil	MSTKPPPSIDAERTKELSLELSGLLRQQLEALEDSAYILMDEEKAEAYEKRSERIAELKAMLGHRSCF*
Ga0066687_100268144	3300005454	Soil	MILLWHMSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF*
Ga0066687_107131251	3300005454	Soil	MSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSGYILMDEKKAEAYEKRSERIAELKAMLGHRSCF*
Ga0066661_103349592	3300005554	Soil	MSTKPQTSIDAERAKKLAVELAGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF*
Ga0066692_102475464	3300005555	Soil	VELAGLLRQQLEALQEATFIPMNEEKAEAYERRSQRIAELKAMLGHASCF*
Ga0066707_103914341	3300005556	Soil	AKKLAVELAGLLRQQLEALEDSAYILMDEEKVEAYEQRSNRIAELKAMLGHRSCF*
Ga0066698_104552461	3300005558	Soil	MYTKPQLSIALSAERAKKLSLELSGLLRQQLETLEDSAYILMDEEKVEAYEQRSKRI
Ga0066698_107575592	3300005558	Soil	RGRFVACSGILWHMSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRVCF*
Ga0066700_109164131	3300005559	Soil	QPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKAEAYEKRSGRIAELKAMLGHRSYF*
Ga0066693_100993722	3300005566	Soil	MSTKPQTSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF*
Ga0066705_108668701	3300005569	Soil	MSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAML
Ga0066694_102664162	3300005574	Soil	MYTKPQLSIALSAERAKKLSLELSGLLRQQLETLEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF*
Ga0066694_103334422	3300005574	Soil	MSTKPQPSIDAERTKELSLELSGLLRQQLEALEDSAYILMDEEKAEAYEKRSERIAELKAMLGHRSCF*
Ga0066694_103403681	3300005574	Soil	MSTKPQTSIDAERAKKLAVELAGLLRQQLEALEDSAYILMDEEKVEAYEQRSNRIAELKAMLGHRSCF*
Ga0066654_104803261	3300005587	Soil	LWHMSTKPPPSIDAERTKELSLELSGLLRQQLEALEDSAYILMDEKKAEAYEKRSERIAELKAMLGHRSCF*
Ga0066706_102520383	3300005598	Soil	QRTAKYIMYCIEPSRGRFVACSGILWHMSTKPQTSIDAERAKKLAVELAGLLRQQLEALEDSAYILMDEEKVEAYEQRSNRIAELKAMLGHRSCF*
Ga0066656_108032462	3300006034	Soil	TAKYIMYCIEQSRGRFVACSGILWHMSTKPQTSIDAERAKKLAVELAGLLRQQLEALEDSAYILMDEEKVEAYEQRSNRIAELKAMLGHRSCF*
Ga0066665_115385761	3300006796	Soil	PSIDAERTKELSLELSGLLRQQLEALEDSAYILMDEEKAEAYEKRSERIAELKAMLGHRSCF*
Ga0066665_116460641	3300006796	Soil	MYCIERGWDGFVACSGMILLWHMSTKPPPSIDAERTKELSLELSGLLRQQLEALEDSAYILMDEKKAEAYEKRSERIAELKAMLGHRSCF*
Ga0066660_113542621	3300006800	Soil	MYCIERSWDGFVACSGMILLWHMSTKPPPSIDAERTKELSFELSGLLRQQLEALEDSGYILMDEKKAEAYEKRSERIAELKAMLGHRSCF*
Ga0066710_1042677022	3300009012	Grasslands Soil	MYTKPQLSIALSAERAKKLSLELSGLLRQQLETLEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSC
Ga0066709_1005034301	3300009137	Grasslands Soil	RAKKLAVELAGLLRQQLEALEDSAYILMDEEKVEAYEQRSNRIAELKAMLGHRSCF*
Ga0066709_1005256224	3300009137	Grasslands Soil	MSTKPPPSIDAELTKELSLELSGLLRQQLEALEDSAYILMDEKKAEAYEKGSERIAELKAMLGHRSCF*
Ga0066709_1044808992	3300009137	Grasslands Soil	MYTKPQLSIALSAERAKKLSLELSGLLRQQLETLEDSAYILMDEEKVEAYEQRSKRIAEL
Ga0134109_100172813	3300010320	Grasslands Soil	MSTKPQPSIDAERTKELSLELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF*
Ga0134109_100920992	3300010320	Grasslands Soil	MILLWHMSTKPPPSIDAERTKELSFELSGLLRQQLEALEDSGYILMDEKKADAYEKRSERIAELKAMLGHRSCF*
Ga0134067_100659172	3300010321	Grasslands Soil	MILLWHMSTKPPPSIDAERTKELSLELSGLLRQQLEALEDSAYILMDEKKAEAYEKRSERIAELKAMLGHRSCF*
Ga0134084_102029351	3300010322	Grasslands Soil	MSTKPPPSIDAERAKKLAVELSVLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF*
Ga0134086_103453022	3300010323	Grasslands Soil	MSAKPQPSIDAERTKKLAVELSGLLRQQLEALEDSAYILMDEEKAEAYEKRSERIAELKAMLGHRSCF*
Ga0134111_100288441	3300010329	Grasslands Soil	KKLSLELSGLLRQQLETLEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCL*
Ga0134080_102503072	3300010333	Grasslands Soil	MSTKPQPSIDAERTKELSLELSGLLRQQLETLEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF*
Ga0134062_108109402	3300010337	Grasslands Soil	MSTKPQPSIDAERAKKLAVELSVLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF*
Ga0137388_102506783	3300012189	Vadose Zone Soil	MCTKAQLSIALSAERRKQLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHASCF*
Ga0137364_113065801	3300012198	Vadose Zone Soil	MSTKPPPSIDAERTKELSLELSGLLRQQLEALEDSGYILMDEKKAEAYEKRSERIAELKAMLGHRSCF*
Ga0137383_102475262	3300012199	Vadose Zone Soil	MSTKPPPSIDAELTKELSLELSGLLRQQLEALEDSAYILMDEEKAEAYEKRSERIAELKAMLGHRSCF*
Ga0137383_106985622	3300012199	Vadose Zone Soil	ILWHMSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF*
Ga0137365_101081242	3300012201	Vadose Zone Soil	MSTKPQPSMDAERTRELAVEIAGLLRQQLEALQEATFIPMNEEKAEAYERRSQRIAELKAMLGHASCF*
Ga0137380_101086135	3300012206	Vadose Zone Soil	MSTKPQPSIDAERTKELAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF*
Ga0137376_102334925	3300012208	Vadose Zone Soil	MSTKPQPSIDAERAKKLAVELSVLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLG
Ga0137376_108157371	3300012208	Vadose Zone Soil	MYTKPQLSIALSAERAKKLSLELSGLLRQQLETLEDSAYILMDEEKAEAYEKRSERIAELNAMLYGSKLIFAH*
Ga0137376_109905582	3300012208	Vadose Zone Soil	MILLWHMSTKPPPSIDAERTKELSLELSGLLRQQLEALEDSGYILMDEKKAEAYEKRSERIAELKAMLGHRSCF*
Ga0137376_114336642	3300012208	Vadose Zone Soil	MSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLG
Ga0137376_117152972	3300012208	Vadose Zone Soil	AERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEKRSGRIAELKAMLGHRSCF*
Ga0137379_107806271	3300012209	Vadose Zone Soil	MSTKPQPSMDAERTRELAVELAGILRQQLEALQEATFIPMNEEKAEAYERRSQRIAELKAMLGHASCF*
Ga0137379_109571382	3300012209	Vadose Zone Soil	VELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAKLKAMLGHRSCF*
Ga0137378_108462852	3300012210	Vadose Zone Soil	MGTKPQLSIVLSAERTKKLAVELSALLRQQFEALEDSTFIPMDEEKAKAYEQRSERIAELNTMLGQCEHRSRLRWDYGR*
Ga0137377_106523711	3300012211	Vadose Zone Soil	IDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF
Ga0137377_106831041	3300012211	Vadose Zone Soil	MSAKPQPSIDAERAKKLAVELSGLLRQQLETLEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF*
Ga0137384_102017211	3300012357	Vadose Zone Soil	KYIMYCIERSRADFVVCNGISQLWIVVAWGTKPQLSIVLSAERTKKLAVELSALLRQQFEALEDSTFIPMDEEKAKAYEQRSERIAELNTMLGQCEHRSRLRWDYGRGY*
Ga0137384_103793274	3300012357	Vadose Zone Soil	MSTKPQPSIDAERAKKLAVELSVLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCL*
Ga0137361_110020172	3300012362	Vadose Zone Soil	LAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAEIKAMLGHRSCF*
Ga0137361_110761902	3300012362	Vadose Zone Soil	MSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAE
Ga0137358_109455261	3300012582	Vadose Zone Soil	MSTKPQTSIDAERAKELAVELSELLRQQLEALEDSAYILMDEEKAEAYEKRSGRIAELKAMLGHRSYF*
Ga0137359_104101532	3300012923	Vadose Zone Soil	MSTKPQPSIDAERAKKLAVELAGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF*
Ga0137359_108019843	3300012923	Vadose Zone Soil	MSTKPQPSMDAERTRELAVELAGLLRQQLEALQEATFIPMNEEKAEAYERRSQRIAEL*
Ga0134110_100486531	3300012975	Grasslands Soil	MSTKPPPSIDAERTKELSLELSGLLRQQLEALEDSAYILMDEKKAEAYEKRSERITELKAMLGHRSCF*
Ga0134075_101785301	3300014154	Grasslands Soil	SIDAERAKKLAVELAGLLRQQLEALQEATFIPMNEEKAEAYERRSQRIAELKAMLGHASCF*
Ga0134073_102276752	3300015356	Grasslands Soil	MILLWHMSTKPPPSIDAERTKELSFELSGLLRQQLEALEDSGYILMDEKKADAYEKRSERIAELKAMLGHPVAFSLQ*
Ga0134074_11329462	3300017657	Grasslands Soil	MSTKPQPSIDAERAKKLAVELSVLLRQQLEALEDSAYILMDEEKAEAYEKRSERIAELKAMLGHRSCF
Ga0066655_101623064	3300018431	Grasslands Soil	MSTKPQPSMDAERTRELAVELAGLLRQQLEALQEATFIPMNEEKAEAYERRSQRIAELKAMLGHASCF
Ga0066655_106451073	3300018431	Grasslands Soil	MSTKPQPSIDAERTKELAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIA
Ga0066667_117818442	3300018433	Grasslands Soil	IDAERTKELSLELSGLLRQQLEALEDSAYILMDEKKAEAYEKRSERIAELKAMLGHRSCF
Ga0066662_118770251	3300018468	Grasslands Soil	MYCIERSWDGFLACSGIPLWHMSTKPPPSIDAERTKELSLELSGLLRQQLEALEDSAYILMDEKKAEAYEKRSERIAELKAMLGHRSCF
Ga0066662_119467991	3300018468	Grasslands Soil	MSTKPQPSMDAERTKKLAVELSALLRQQFEALEDSTFIPMDEEKTKAYEQRSERIAELNTMLGQYEHRSRLRWD
Ga0066669_101045114	3300018482	Grasslands Soil	MYCIERSWDGFVACSGMILLWHMSTKPPPSIDAERTKELSLELSGLLRQQLEALEDSGYILMDEKKAEAYEKRSERIAELKAMLGHRSCF
Ga0066669_101471443	3300018482	Grasslands Soil	MSTKPQTSIDAERAKKLAVELAGLLRQQLEALEDSAYILMDEEKVEAYEQRSNRIAELKAMLGHRSCF
Ga0207693_101177101	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	PQLSIVLSRTKELAVELSDLLRQQFEALEGSTFIRMNAEEDEAYERRSQRIAELKAMLGDASCF
Ga0209350_10160904	3300026277	Grasslands Soil	MSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF
Ga0209234_10440552	3300026295	Grasslands Soil	MSTKPQPSIDAERAKKLAVELAGLLRQQLEALQEATFIPMNEEKAEAYERRSQRIAELKAMLGHASCF
Ga0209235_11396012	3300026296	Grasslands Soil	MSTKPQPSMDAERTKKLAVELSALLRQQFEALEDSTFIPMDEEKAKAYEQRSERIAELNTMLGQCEHRSRLRWDYGR
Ga0209237_11065361	3300026297	Grasslands Soil	MSTKPQTSIDAERAKKLAVELAGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF
Ga0209238_11405071	3300026301	Grasslands Soil	GILWHMSTKPQPSIDAERAKKLAVELSVLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF
Ga0209055_10708324	3300026309	Soil	MMILLWHMSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF
Ga0209153_12070302	3300026312	Soil	MYCIERGWDGFVACSGMILLWHMSTKPPPSIDAERTKELSFELSGLLRQQLEALEDSAYILMDEKKAEAYEKRSERIAELKAMLGHRSCF
Ga0209686_11107711	3300026315	Soil	PTAKYIMYCIEQSRGRFVACSGILWYMSTKPQTSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF
Ga0209686_11862522	3300026315	Soil	MGTKPQLSISLSARWVKELSLELAALLREQIEALEDSGYILMDEKKAEAYEKRSERIAELKAMLGHRSCF
Ga0209155_10495562	3300026316	Soil	MYCIERGWDGFVACSGMILLWHMSTKPPPSIDAERTKELSFELSGLLRQQLEALEDSGYILMDEKKAEAYEKRSERIAELKAMLGHRSCF
Ga0209154_10221303	3300026317	Soil	MILLWHMSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF
Ga0209472_10645901	3300026323	Soil	MSTKPPPSIDAELTKALEDSAYILMDEKKAEAYEKRSERIAELKAMLGHRSCF
Ga0209470_12027171	3300026324	Soil	MYCIEQSQGRFVACSGILWHMSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF
Ga0209266_10584491	3300026327	Soil	MSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRVCF
Ga0209375_10821572	3300026329	Soil	MSTKPPPSIDAELTKELSLELSGLLRQQLEALEDSAYILMDEKKAEAYEKRSERIAELKAMLGHRSCF
Ga0209375_11723231	3300026329	Soil	PSRGRFVACSGILWHMSTKPQTSIDAERAKKLAVELAGLLRQQLEALEDSAYILMDEEKVEAYEQRSNRIAELKAMLGHRSCF
Ga0209473_10945504	3300026330	Soil	MSTKPQTSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF
Ga0209473_11846672	3300026330	Soil	MGTKPQLSIILSAERTKELAAELSELLRQQLEALEDETFIPMDEERAEAYEQRSKRIAELNAMLYGSKLICAH
Ga0209057_10237227	3300026342	Soil	MYCIERGWDGFVACSGMILLWHMSTKPPPSIDAERTKELSFELSGLLRQQLEALEDSGYILMDEKKADAYEKRSERIAELKAMLGHPVAFSLQ
Ga0209057_11338142	3300026342	Soil	MYCIEQSRGRFVACSGILWYMSTKPQTSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF
Ga0209808_10239392	3300026523	Soil	MYGILWHMSTKPQPSIDAERAKKLAVELSVLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF
Ga0209808_10676071	3300026523	Soil	MYCIEQSRGRFVACRGILWHMSTKPQTSIDAERAKKLAVELAGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKA
Ga0209378_10356531	3300026528	Soil	KPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF
Ga0209807_10787552	3300026530	Soil	MSTKPPPSIDAELTKELSLELSGLLRQQLEALEDSAYILMDEKKAEAYEKGSERIAELKAMLGHRSCF
Ga0209160_11962482	3300026532	Soil	SRGRFVACSGILWHMSTKPQTSIDAERAKKLAVELAGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF
Ga0209058_10633602	3300026536	Soil	MYCIEPSRGRFVACSGILWHMSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF
Ga0209056_100749166	3300026538	Soil	MYCIEPSRGRFVACSGMMILLWHMSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF
Ga0209056_101521503	3300026538	Soil	ERAKKLAVELAGLLRQQLEALEDSAYILMDEEKVEAYEQRSNRIAELKAMLGHRSCF
Ga0209156_102831321	3300026547	Soil	MGTKPQLSISLSARRVKELSLELAALLREQIEALEDSGYILMDEKKAEAYEKRSERIAELKAMLGHRSCF
Ga0209156_103749362	3300026547	Soil	KYIMYCIEPGRGRFVACNKSLWHMSTKPQPSIDAERAKKLAVELSGLLRQQLEALEDSAYILMDEEKVEAYEQRSKRIAELKAMLGHRSCF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063514

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences