Metagenome / Metatranscriptome Family F063513

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063513
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	59 residues
Representative Sequence	MTCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR
Number of Associated Samples	100
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.91 %
% of genes near scaffold ends (potentially truncated)	37.21 %
% of genes from short scaffolds (< 2000 bps)	83.72 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.822 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (28.682 % of family members)
Environment Ontology (ENVO)	Unclassified (68.217 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.643 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 67.80% β-sheet: 0.00% Coil/Unstructured: 32.20%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF08402	TOBE_2	1.55
PF03070	TENA_THI-4	1.55
PF08334	T2SSG	1.55
PF01329	Pterin_4a	1.55
PF13544	Obsolete Pfam Family	0.78
PF02738	MoCoBD_1	0.78
PF01255	Prenyltransf	0.78
PF12681	Glyoxalase_2	0.78
PF14064	HmuY	0.78
PF00239	Resolvase	0.78
PF06305	LapA_dom	0.78
PF01011	PQQ	0.78
PF00005	ABC_tran	0.78
PF00589	Phage_integrase	0.78
PF02954	HTH_8	0.78
PF01593	Amino_oxidase	0.78
PF01569	PAP2	0.78
PF12695	Abhydrolase_5	0.78
PF10589	NADH_4Fe-4S	0.78
PF00583	Acetyltransf_1	0.78
PF01734	Patatin	0.78
PF13561	adh_short_C2	0.78
PF14366	DUF4410	0.78
PF00582	Usp	0.78
PF00072	Response_reg	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	1.55
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	0.78
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.78
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.78
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.78
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.78
COG3771	Lipopolysaccharide assembly protein YciS/LapA, DUF1049 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.82 %
Unclassified	root	N/A	13.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.82 %
Unclassified	root	N/A	13.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.82 %
Unclassified	root	N/A	13.18 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	58.91 %
Unclassified	root	N/A	13.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.98 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.33 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	58.91 %
Unclassified	root	N/A	13.18 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.55 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	57.36 %
Unclassified	root	N/A	13.18 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	17.05 %
Unclassified	root	N/A	13.18 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.55 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.78 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	16.28 %
Unclassified	root	N/A	13.18 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.55 %
Candidatus Rokubacteria bacterium 13_1_40CM_2_68_13	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_2_68_13	0.78 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.78 %
Candidatus Parcubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	16.28 %
Unclassified	root	N/A	13.18 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.55 %
unclassified Parcubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria	0.78 %
Candidatus Rokubacteria bacterium 13_1_40CM_2_68_13	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_2_68_13	0.78 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	16.28 %
Unclassified	root	N/A	13.18 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.55 %
Candidatus Parcubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium	0.78 %
Candidatus Rokubacteria bacterium 13_1_40CM_2_68_13	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_2_68_13	0.78 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10103114	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	841	Open in IMG/M
3300002560\|JGI25383J37093_10105164	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	818	Open in IMG/M
3300002561\|JGI25384J37096_10225361	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	548	Open in IMG/M
3300002562\|JGI25382J37095_10214623	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300002908\|JGI25382J43887_10075503	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1818	Open in IMG/M
3300002908\|JGI25382J43887_10347796	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Parcubacteria → unclassified Parcubacteria → Candidatus Parcubacteria bacterium	630	Open in IMG/M
3300002911\|JGI25390J43892_10094498	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	671	Open in IMG/M
3300005167\|Ga0066672_10245596	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1151	Open in IMG/M
3300005172\|Ga0066683_10005895	All Organisms → cellular organisms → Bacteria → Proteobacteria	5992	Open in IMG/M
3300005174\|Ga0066680_10145872	All Organisms → cellular organisms → Bacteria → Proteobacteria	1478	Open in IMG/M
3300005176\|Ga0066679_10252940	All Organisms → cellular organisms → Bacteria → Proteobacteria	1135	Open in IMG/M
3300005177\|Ga0066690_10089106	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1965	Open in IMG/M
3300005177\|Ga0066690_10243784	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1205	Open in IMG/M
3300005177\|Ga0066690_10932557	Not Available	551	Open in IMG/M
3300005180\|Ga0066685_10531088	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	812	Open in IMG/M
3300005332\|Ga0066388_100220522	All Organisms → cellular organisms → Bacteria	2526	Open in IMG/M
3300005445\|Ga0070708_100058626	All Organisms → cellular organisms → Bacteria	3431	Open in IMG/M
3300005552\|Ga0066701_10215280	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1181	Open in IMG/M
3300005552\|Ga0066701_10462760	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300005553\|Ga0066695_10085318	All Organisms → cellular organisms → Bacteria	1922	Open in IMG/M
3300005554\|Ga0066661_10109205	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1662	Open in IMG/M
3300005554\|Ga0066661_10722037	Not Available	584	Open in IMG/M
3300005555\|Ga0066692_10650686	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	657	Open in IMG/M
3300005557\|Ga0066704_10319925	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1045	Open in IMG/M
3300005557\|Ga0066704_10537860	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	763	Open in IMG/M
3300005568\|Ga0066703_10562070	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	669	Open in IMG/M
3300006034\|Ga0066656_10324587	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	994	Open in IMG/M
3300006046\|Ga0066652_100319430	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300006796\|Ga0066665_11582399	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	515	Open in IMG/M
3300006854\|Ga0075425_100198276	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2307	Open in IMG/M
3300007258\|Ga0099793_10297815	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300009012\|Ga0066710_100436029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1961	Open in IMG/M
3300009012\|Ga0066710_100986194	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1300	Open in IMG/M
3300009012\|Ga0066710_103543884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	590	Open in IMG/M
3300009012\|Ga0066710_103965944	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	554	Open in IMG/M
3300009090\|Ga0099827_10520665	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1023	Open in IMG/M
3300009137\|Ga0066709_104081281	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	531	Open in IMG/M
3300009137\|Ga0066709_104139526	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	528	Open in IMG/M
3300009444\|Ga0114945_10224743	Not Available	1093	Open in IMG/M
3300010301\|Ga0134070_10014286	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2534	Open in IMG/M
3300010301\|Ga0134070_10434639	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	523	Open in IMG/M
3300010303\|Ga0134082_10477312	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	541	Open in IMG/M
3300010304\|Ga0134088_10002540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	7280	Open in IMG/M
3300010304\|Ga0134088_10659732	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	523	Open in IMG/M
3300010323\|Ga0134086_10033061	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1710	Open in IMG/M
3300010329\|Ga0134111_10255213	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	721	Open in IMG/M
3300010336\|Ga0134071_10256450	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	872	Open in IMG/M
3300010336\|Ga0134071_10598333	Not Available	576	Open in IMG/M
3300010358\|Ga0126370_11676571	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	611	Open in IMG/M
3300010359\|Ga0126376_10473128	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1152	Open in IMG/M
3300010359\|Ga0126376_12914519	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	528	Open in IMG/M
3300010362\|Ga0126377_10834732	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300010398\|Ga0126383_12150432	Not Available	645	Open in IMG/M
3300010905\|Ga0138112_1095675	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	505	Open in IMG/M
3300011269\|Ga0137392_10749300	Not Available	808	Open in IMG/M
3300012202\|Ga0137363_10212257	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1558	Open in IMG/M
3300012202\|Ga0137363_11054156	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	691	Open in IMG/M
3300012203\|Ga0137399_11701150	Not Available	519	Open in IMG/M
3300012205\|Ga0137362_10051078	All Organisms → cellular organisms → Bacteria	3371	Open in IMG/M
3300012207\|Ga0137381_10364711	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1259	Open in IMG/M
3300012209\|Ga0137379_10332510	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1429	Open in IMG/M
3300012210\|Ga0137378_11062851	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	724	Open in IMG/M
3300012349\|Ga0137387_10508493	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	874	Open in IMG/M
3300012351\|Ga0137386_10077252	All Organisms → cellular organisms → Bacteria	2329	Open in IMG/M
3300012356\|Ga0137371_10356993	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1135	Open in IMG/M
3300012357\|Ga0137384_10341164	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1242	Open in IMG/M
3300012361\|Ga0137360_10243520	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1474	Open in IMG/M
3300012371\|Ga0134022_1034403	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	633	Open in IMG/M
3300012373\|Ga0134042_1152022	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300012399\|Ga0134061_1008406	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1130	Open in IMG/M
3300012404\|Ga0134024_1360803	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	931	Open in IMG/M
3300012918\|Ga0137396_10016147	All Organisms → cellular organisms → Bacteria → Proteobacteria	4706	Open in IMG/M
3300012923\|Ga0137359_10679551	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300012923\|Ga0137359_10682166	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	896	Open in IMG/M
3300012925\|Ga0137419_11699078	Not Available	538	Open in IMG/M
3300012929\|Ga0137404_10507934	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1076	Open in IMG/M
3300012929\|Ga0137404_11059740	Not Available	743	Open in IMG/M
3300012948\|Ga0126375_10543149	Not Available	876	Open in IMG/M
3300012976\|Ga0134076_10563008	Not Available	528	Open in IMG/M
3300014157\|Ga0134078_10049775	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1446	Open in IMG/M
3300014166\|Ga0134079_10602946	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	546	Open in IMG/M
3300015053\|Ga0137405_1176896	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	997	Open in IMG/M
3300015241\|Ga0137418_10191450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1774	Open in IMG/M
3300015241\|Ga0137418_10377181	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1163	Open in IMG/M
3300015245\|Ga0137409_10969957	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300015264\|Ga0137403_10384250	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1286	Open in IMG/M
3300015358\|Ga0134089_10386336	Not Available	596	Open in IMG/M
3300015358\|Ga0134089_10425548	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	571	Open in IMG/M
3300015359\|Ga0134085_10263447	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	752	Open in IMG/M
3300017656\|Ga0134112_10149247	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	899	Open in IMG/M
3300017657\|Ga0134074_1127298	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	883	Open in IMG/M
3300018431\|Ga0066655_10043560	All Organisms → cellular organisms → Bacteria	2273	Open in IMG/M
3300018431\|Ga0066655_10946956	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	591	Open in IMG/M
3300018433\|Ga0066667_10019391	All Organisms → cellular organisms → Bacteria	3570	Open in IMG/M
3300018433\|Ga0066667_10030559	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3021	Open in IMG/M
3300018433\|Ga0066667_10489971	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1011	Open in IMG/M
3300018433\|Ga0066667_10711266	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	844	Open in IMG/M
3300018468\|Ga0066662_11389145	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	726	Open in IMG/M
3300018482\|Ga0066669_10188160	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_40CM_2_68_13	1566	Open in IMG/M
3300020170\|Ga0179594_10166716	All Organisms → cellular organisms → Bacteria → Proteobacteria	819	Open in IMG/M
3300026277\|Ga0209350_1027325	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1722	Open in IMG/M
3300026295\|Ga0209234_1175144	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300026296\|Ga0209235_1013019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4580	Open in IMG/M
3300026296\|Ga0209235_1197815	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300026297\|Ga0209237_1028114	All Organisms → cellular organisms → Bacteria	3106	Open in IMG/M
3300026298\|Ga0209236_1008634	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	6060	Open in IMG/M
3300026298\|Ga0209236_1189149	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	795	Open in IMG/M
3300026309\|Ga0209055_1302596	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	504	Open in IMG/M
3300026318\|Ga0209471_1071725	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M
3300026323\|Ga0209472_1181460	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300026324\|Ga0209470_1006337	All Organisms → cellular organisms → Bacteria	7572	Open in IMG/M
3300026324\|Ga0209470_1378164	Not Available	506	Open in IMG/M
3300026326\|Ga0209801_1096388	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1283	Open in IMG/M
3300026334\|Ga0209377_1133689	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	972	Open in IMG/M
3300026335\|Ga0209804_1164224	Not Available	980	Open in IMG/M
3300026342\|Ga0209057_1034040	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2628	Open in IMG/M
3300026524\|Ga0209690_1235455	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300026529\|Ga0209806_1047051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2047	Open in IMG/M
3300026529\|Ga0209806_1097187	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1265	Open in IMG/M
3300026537\|Ga0209157_1097776	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1400	Open in IMG/M
3300026548\|Ga0209161_10451956	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	565	Open in IMG/M
3300026551\|Ga0209648_10231007	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1386	Open in IMG/M
3300026557\|Ga0179587_10789382	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	626	Open in IMG/M
3300027748\|Ga0209689_1376079	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	543	Open in IMG/M
3300028536\|Ga0137415_10000569	All Organisms → cellular organisms → Bacteria → Proteobacteria	35849	Open in IMG/M
3300031820\|Ga0307473_10967628	All Organisms → cellular organisms → Bacteria → Proteobacteria	619	Open in IMG/M
3300032180\|Ga0307471_103840060	Not Available	531	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.22%
Host-Associated	Host-Associated	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.45%
Aquatic	Environmental → Aquatic	0.78%
Plants	Host-Associated → Plants	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.45%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	96.90%
Loam	Environmental → Terrestrial → Soil → Loam	1.55%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	51.16%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.55%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	28.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	22.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	17.05%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.55%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010905	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012371	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012399	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_101031141	3300002558	Grasslands Soil	DERNGPGIVEKAALLIAPLLASRPIRALARLLPRDVRKAIVTVLLTVANVLRR*
JGI25383J37093_101051642	3300002560	Grasslands Soil	MTCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPRDVRKAIVTVLLTVANVLRR*
JGI25384J37096_102253611	3300002561	Grasslands Soil	MTCEDYDERNEPGIVEKVALLIAPLLASRRDPRAGAVTAPRREEAIVTVLLTMVNV
JGI25382J37095_102146232	3300002562	Grasslands Soil	PGIVEKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR*
JGI25382J43887_100755034	3300002908	Grasslands Soil	MTCEDYDERNGPGIVETAALLIAPLLASRPTRAMARLLPQGVKKALVTVLLTVTNDLRR*
JGI25382J43887_103477961	3300002908	Grasslands Soil	MTCEDYDERNGPGIVEKVALLIAPLLASRPIRALARLLPQDVRRAIVTVLLTVANVLRR*
JGI25390J43892_100944981	3300002911	Grasslands Soil	MTCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR*
Ga0066672_102455962	3300005167	Soil	MTCEDDDEKNGAGVVEKAARQIVPLLASRPARTLARLLPQGVKRSIVTVLLTVTDALRR*
Ga0066683_100058954	3300005172	Soil	MTCEDYETNGPGIVQKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR*
Ga0066680_101458723	3300005174	Soil	RRRDDPVEGSTMTCEDDDEKNGAGVVEKAARQIVPLLASRPARTLARLLPQGVKRSIVTVLLTVTDALRR*
Ga0066679_102529402	3300005176	Soil	MTCEDDDEKNGAGMVEKAARQIAPLLASRPARTLTRLLPRGVKKSIVTVLLTVTDALRR*
Ga0066690_100891065	3300005177	Soil	LVAEDSVMTCEDYDERNEPGIVEKVALLIAPLLASRRDPRAGAVTAPRREEAIVTVLLTMVNVVLRR*
Ga0066690_102437842	3300005177	Soil	MTCEDEDERNGAGMAEKAARQIAPLLASRPARTLARLLPQGVKKSIVTLLLTVTDALRR*
Ga0066690_109325571	3300005177	Soil	SLAAVAPDSGQACQNRRWSDTVEGSTMTCEDDDEKNGAGMVEKAARQIAPLLASRPARTLTRLLPRGVKKSIVTVLLTVTDALRR*
Ga0066685_105310882	3300005180	Soil	MTCEDYDERNGPGIVEKVSLLIAPLLASRPIRALARLLPQDVRRAIVTVLLTVANVLRR*
Ga0066388_1002205223	3300005332	Tropical Forest Soil	MTCEDYDERNGPGIVEKAARRLAPLLDSRPILALARLLPQDMRQAVVTILLTMVNVLRK*
Ga0070708_1000586262	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSCEDYEDRNGQSLVEKAARQFASVLASPPIRGLVVLLPQGMRRAIVTVLWTAADVLRR*
Ga0066701_102152803	3300005552	Soil	MTCEDYETNGPGIVERAALLIAPLLASRPIRTLARLLPQDVRRAIVTVLLTVANVLRR*
Ga0066701_104627602	3300005552	Soil	LTVLSSLVAEMTCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR*
Ga0066695_100853181	3300005553	Soil	MTCEDYETNGPGIVQKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLL
Ga0066661_101092051	3300005554	Soil	GCLTVLSSLVAEMTCEDYDERNGPGIVETAALLIAPLLASRPTRAMARLLPQGVKKALVTVLLTVTNDLRR*
Ga0066661_107220371	3300005554	Soil	MTCEDEDERNGAGMAEKAARQIAPLLASRPARTLTRLLPRGVKKSIVTVLLTVTDALRR*
Ga0066692_106506862	3300005555	Soil	LTVLSSLVAEMTCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRG*
Ga0066704_103199252	3300005557	Soil	MTCEDYDERNGPGIVEKVAFLIAPLLASRPTRAMARLLPQGVKKALVTVLLTVTNDLRR*
Ga0066704_105378601	3300005557	Soil	LTVPSSLVAEDSVMTCEDYDERNEPGIVEKVALLIAPLLASRRDPRAGAVTAPRREEAIVTVLLTMVNVVLRR*
Ga0066703_105620702	3300005568	Soil	MTCEDYDERNEPGIVEKVALLIAPLLASRRDPRAGAVTAPRREEAIVTVLLTMVNVLRR*
Ga0066656_103245872	3300006034	Soil	LIVPSSFVAEDSVMTCEDYETNGPGIVQKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR*
Ga0066652_1003194304	3300006046	Soil	MTCEDYETNGPGIVQKAALLIAPLLASRPIRALARLLPQDVRRAIVTVLLTV
Ga0066665_115823992	3300006796	Soil	KMTCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR
Ga0075425_1001982763	3300006854	Populus Rhizosphere	MTCEDYETNGPGIVEKAALLIAPLLASRPIRALARLLPQDARKAMVTVLLTVANVLRR*
Ga0099793_102978153	3300007258	Vadose Zone Soil	MTCEDYDERNGPGIVEKVALLIAPLLASRPIRALARLLPRDVRKAIVTVLLTVANVLRR*
Ga0066710_1004360292	3300009012	Grasslands Soil	MSCEDYDERNGPGIVEKAALQIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR
Ga0066710_1009861943	3300009012	Grasslands Soil	FVAEDSVMTCEDYETNGPGIVQKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR
Ga0066710_1035438841	3300009012	Grasslands Soil	MTCEDYDERNGPGIVEKVAFLIAPLLASRPTRATARLLPQGVKKALVTVLLTVTNDLRYS
Ga0066710_1039659442	3300009012	Grasslands Soil	GCLTVLSSLVAEMTCEDYDERNGPGIVETAALLIAPLLASRPTRAMARLLPQGVKKALVTVLLTVTNDLRR
Ga0099827_105206653	3300009090	Vadose Zone Soil	RPSIVEKAAHQIASLVASRPIRALARLLPQNVRNAIVTVLLTVANVLRR*
Ga0066709_1040812811	3300009137	Grasslands Soil	MTCDDYDERNEPGIVEKVALLIAPLLASRRDPRAGAVNAPRREEAIVTVLLTMVNVVLRR
Ga0066709_1041395262	3300009137	Grasslands Soil	EMTCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR
Ga0114945_102247432	3300009444	Thermal Springs	MTCEDYEEPNGKSLVEKAARHIAPLLASGPSQALARLLPQGVRRAIVTVLLTVADVLRK*
Ga0134070_100142861	3300010301	Grasslands Soil	EDYETNGPGIVERAALLIAPLLASRPIRTLARLLPQDVRRAIVTVLLTVANVLRR*
Ga0134070_104346391	3300010301	Grasslands Soil	MTCEDYDERNGPGIVEKVALLIAPLLASRRDPRAGAVTAPRREEAIVTVLLTMVNVVLRR
Ga0134082_104773122	3300010303	Grasslands Soil	LFVAEDSVMTCEDYETNGPGIVQKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR*
Ga0134088_1000254010	3300010304	Grasslands Soil	GTFEKAANKVAALLASRPTRALVRLLPQDVRKAIVTVLLTVANVLRR*
Ga0134088_106597321	3300010304	Grasslands Soil	MSCEDYDERNGPGIVEKVALQIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR*
Ga0134086_100330615	3300010323	Grasslands Soil	MTCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPRDVRKAIVTVLLTV
Ga0134111_102552131	3300010329	Grasslands Soil	MTCEDYDERNGPGIVEKVALLIAPLRASRRDPRAGAVTAPRREEAIVTVLLTMVNVVLRR
Ga0134071_102564502	3300010336	Grasslands Soil	MTCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPRDVRKTIVTVLLTVANVLRR*
Ga0134071_105983331	3300010336	Grasslands Soil	MTCEDCEELNAGTFEKAANKVAALLASRPTRALVRLLPQDVRKAIVTILLTVANVLRR*
Ga0126370_116765711	3300010358	Tropical Forest Soil	MTCEDYEASNGPGILEKAARQIAGFVASRPIQAVARLLPQDVRRALVTVLLTATDVLRR*
Ga0126376_104731282	3300010359	Tropical Forest Soil	PSSVVLGGGSAMTCEDYEASNGPGILEKAARQIAGFVASRPIQAVARLLPQDVRRALVTVLLTATDVLRR*
Ga0126376_129145192	3300010359	Tropical Forest Soil	MTCEDYDERNGPGIVEKAARQLAPLLDSRPIRALARLLPQDVRQAVITVLLT
Ga0126377_108347322	3300010362	Tropical Forest Soil	MTCEDYDERNGPGIVEKAARQLAPLLDSRPIRALARLLPQDVRQAVVTVLLTMVNVFRK*
Ga0126383_121504321	3300010398	Tropical Forest Soil	MTCEDYEASNGPGILEKAARQIAGFVASRPIQAVARLLPQDVRRALVTVLLTATD
Ga0138112_10956752	3300010905	Grasslands Soil	MTCEDYDERNGPGIVEKVSLLIAPLLASRPIRALARLLPRDVRKAIVTVLLTVANVLRR*
Ga0137392_107493001	3300011269	Vadose Zone Soil	MTCEDEDERNGAGMVEKAARQIAPLLASRPARTLARLLPQGVKKSIVTLLLTVTDALRR*
Ga0137363_102122572	3300012202	Vadose Zone Soil	MTCEDYDERNGPGIVEKAALLIAPLLASRPFRALARLLPRDVRKAIVTVLLTVANVLRR*
Ga0137363_110541563	3300012202	Vadose Zone Soil	GIVEKAALLIAPLLASRPIRALARLLPQDVRRAIVTVLLTVANVLRR*
Ga0137399_117011501	3300012203	Vadose Zone Soil	MTCEDEDERNGAGMAEKAARQIAPLLPPRTARTLARLLPQGVTK
Ga0137362_100510781	3300012205	Vadose Zone Soil	YDERNGPGIVEKAALLIAPLLASRPIRALARLLPQDVRRAIVTVLLTVANVLRR*
Ga0137381_103647111	3300012207	Vadose Zone Soil	GPGIVEKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR*
Ga0137379_103325102	3300012209	Vadose Zone Soil	LIVPSSFVAEDSVMTCEDYETNGPGIVERAALLIAPLLASRPIRTLARLLPQDVRRAIVTVLLTVANVLRR*
Ga0137378_110628511	3300012210	Vadose Zone Soil	MTCDDYDERNEPGIVEKVALLIAPLLASRRDPRAGAVTAPRREEAIVTVLLTMVNVVRR*
Ga0137387_105084931	3300012349	Vadose Zone Soil	EDSVMTCEDYETNGPGIVERAALLIAPLLASRPIRALARLLPQDVRRAIVTVLLTVANVLRR*
Ga0137386_100772525	3300012351	Vadose Zone Soil	LIVTSSFVAEDSVMTCEDYETNGPGIVQKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR*
Ga0137371_103569933	3300012356	Vadose Zone Soil	LTVLSSLVAEMTCEDYDERNGPGIVEKVAFLIAPLLASRPTRAMARLLPQGVKKALVTVLLTVTNDLRR*
Ga0137384_103411642	3300012357	Vadose Zone Soil	MTCEDYDERNGPGIVEKVALLIAPLLASRPIRALARLLPQDVRRAIVTVRLTVANVLRR*
Ga0137360_102435204	3300012361	Vadose Zone Soil	MTGEDYDERNGPGIVEKVALLIAPLLASRPIRALARLLPQDVRRAIVTVLLTVANVLRR*
Ga0134022_10344032	3300012371	Grasslands Soil	FLHRWWLKMTCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPRDVRKAIVTVLLTVANVLRR*
Ga0134042_11520221	3300012373	Grasslands Soil	MTCEDYDERNGPGIVEKAALLMAPLLASRPIRALARLLPRDVRKAIVTVLLTVANVLRR*
Ga0134061_10084062	3300012399	Grasslands Soil	MTCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPRDVRNAIVTVLLTVANVLRR*
Ga0134024_13608031	3300012404	Grasslands Soil	PGIVEKAALLIAPLLASRPIRALARLLPRDVRKAIVTVLLTVANVLRR*
Ga0137396_100161476	3300012918	Vadose Zone Soil	MTCEDEDERNGAGLVEKAARQIAPLLASRPARTLARLLPQGVKKSIVTLLLTVTDALRR*
Ga0137359_106795512	3300012923	Vadose Zone Soil	MTCEDYDERNGPGIVEKVALLIAPLLASRPFRALARLLPRDVRKAIVTVLLTVANVLRR*
Ga0137359_106821662	3300012923	Vadose Zone Soil	MTCEDEDERNGAGVVEKAARQIAPLLASRPARTLARLLPQGVKKSIVTLLLTVTDALRR*
Ga0137419_116990781	3300012925	Vadose Zone Soil	MTCEDEDERNGAGMAEKAARQIAPLLASRPARTLARLLPQGVKKSIVTLLLTV
Ga0137404_105079341	3300012929	Vadose Zone Soil	HRWWLKMTCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPRDVRKAIVTVLLTVANVLRR*
Ga0137404_110597401	3300012929	Vadose Zone Soil	DYDERNGPGIVEKAALLIAPLLASRPIRALARLLSQDVRKAIVTVLLTVANVLRR*
Ga0126375_105431492	3300012948	Tropical Forest Soil	EDYDERNGTSIVEKAARRMARLLTSRWIGALARALPRDIRQAIVTVLVTAVNVLRK*
Ga0134076_105630081	3300012976	Grasslands Soil	DYETNGPGIVQKAALLIAPLLASRPIRALARLLPQGVRKAIVTVLLTVANVLRR*
Ga0134078_100497753	3300014157	Grasslands Soil	MTCDDYDERNEPGIVEKVALLIAPLLASRRDPRAGAVTAPRREEAIVTVLLTMVNVVLR
Ga0134079_106029462	3300014166	Grasslands Soil	MTCEDYDERNGPGIVEKVALQLAPLLASRPIRALARLLPRDVRKAIVTVLLTVANVLRR*
Ga0137405_11768961	3300015053	Vadose Zone Soil	VPSSLVAEDSVMTCEDYDERNEPGIVEKVALLIAPLLASRRDPRAGAVTAPRREEAIVTVLLTMVNVVLRR*
Ga0137418_101914504	3300015241	Vadose Zone Soil	MTCEDYDERNGPGIVEKAALLIAPLLASRPFRALARLLPRDVRKAIVTVL
Ga0137418_103771813	3300015241	Vadose Zone Soil	TCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPRDVRKAIVTVLLTVANVLRR*
Ga0137409_109699573	3300015245	Vadose Zone Soil	MTCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPRDVRKAIVTVL
Ga0137403_103842503	3300015264	Vadose Zone Soil	MTCEDYETNGPGIVQKAALLIAPLLASRPIRALARLLSQDVRKAIVTVLLTVANVLRR*
Ga0134089_103863361	3300015358	Grasslands Soil	MTCEDCEELNAGTFEKAANKVAALLASRPTRALVRLLPQDVRKAIVTVLLTVANVLRR*
Ga0134089_104255482	3300015358	Grasslands Soil	MTCEDYDERNGPGIVEKVALQIAPLLASRPIRALARLLPRDVRKAIVSVLLTVANVLRR*
Ga0134085_102634471	3300015359	Grasslands Soil	GPGIVEKAALLIAPLLASRPIRALARLLPRDVRNAIVTVLLTVANVLRR*
Ga0134112_101492472	3300017656	Grasslands Soil	MSCEDYDERNGPGIVEKAALQIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRG
Ga0134074_11272981	3300017657	Grasslands Soil	ETNGPGIVQKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR
Ga0066655_100435601	3300018431	Grasslands Soil	MTCEDYETNGPGIVERAALLIAPLLASRPIRTLARLLPQDVRRAIVTVLLTVANVLRR
Ga0066655_109469561	3300018431	Grasslands Soil	MTCEDYDERNEPGIVEKVALLIAPLLASRRDPRAGAVTAPRREEAIVTVLL
Ga0066667_100193914	3300018433	Grasslands Soil	MTCEDDDEKNGAGVVEKAARQIVPLLASRPARTLARLLPQGVKRSIVTVLLTVTDALRR
Ga0066667_100305593	3300018433	Grasslands Soil	MTCEDYDERNGPGIVEKVSLLIAPLLASRPIRALARLLPQDVRRAIVTVLLTVANVLRR
Ga0066667_104899712	3300018433	Grasslands Soil	MTCEDYETNGPGIVQKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR
Ga0066667_107112661	3300018433	Grasslands Soil	MTCDDYDERNEPGIVEKVALLIAPLLASRRDPRAGAVTAPRREEAIVTVLLTMVNVVLRR
Ga0066662_113891452	3300018468	Grasslands Soil	MTCEDYDERNEPGIVEKVALLIAPLLASRRDPRAGAVTAPRREEAIVTVLLTMVNVVLRR
Ga0066669_101881604	3300018482	Grasslands Soil	MTREDCDERNGPGIVEKAALLIAPLLASRPIRALARLLPQDVRRAIVTVLLTVANVLRR
Ga0179594_101667162	3300020170	Vadose Zone Soil	MTCEDEDERNGAGMAEKAARQIAPLLASRPARTLARLLPQGVKKSIVTLLLTVTDALRR
Ga0209350_10273253	3300026277	Grasslands Soil	MTCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPRDVRKAIVTVLLTVANVLRR
Ga0209234_11751442	3300026295	Grasslands Soil	MTCEDYDERNGPGIVEKAALLIAPLLASRRDPRAGAVTAPRREEAIVTVLLTMVNVVLRR
Ga0209235_10130194	3300026296	Grasslands Soil	LTVLSSLVAEMTCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR
Ga0209235_11978151	3300026296	Grasslands Soil	LTVLSSLVAEMTCEDYDERNGPGIVETAALLIAPLLASRPTRAMARLLPQGVKKALVTVLLTVTNDLRR
Ga0209237_10281145	3300026297	Grasslands Soil	MTCEDYDERNGPGIVEKVALLIAPLLASRPIRALARLLPQDVRRAIVTVLLTVANVLRR
Ga0209236_100863413	3300026298	Grasslands Soil	MTCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR
Ga0209236_11891491	3300026298	Grasslands Soil	SSLVAEDSVMTCEDYDERNGPGIVEKVALLIAPLLASRPIRALARLLPQDVRRAIVTVLLTVANVLRR
Ga0209055_13025961	3300026309	Soil	MTCEDYDERNGPGIVETAALLIAPLLASRPTRAMARLLPQGVKKALVTVLLTVTNDLRR
Ga0209471_10717252	3300026318	Soil	MTCEDDDEKNGAGMVEKAARQIAPLLASRPARTLTRLLPRGVKKSIVTVLLTVTDALRR
Ga0209472_11814602	3300026323	Soil	LTVPSSLAEDSVMTCDDYDERNEPGIVEKVALLIAPLLASRRDPRAGAVTAPRREEAIVTVLLTMVNVVLRR
Ga0209472_11890041	3300026323	Soil	IVQKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR
Ga0209470_100633710	3300026324	Soil	MTCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPRDVRKTIVTVLLTVANVLRR
Ga0209470_13781641	3300026324	Soil	LFVAEDSVMTCEDYETNGPGIVQKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR
Ga0209801_10963881	3300026326	Soil	CQNRRRDDPVEGSTMTCEDDDEKNGAGVVEKAARQIVPLLASRPARTLARLLPQGVKRSIVTVLLTVTDALRR
Ga0209377_11336891	3300026334	Soil	LVAEDSVMTCEDYDERNEPGIVEKVALLIAPLLASRRDPRAGAVTAPRREEAIVTVLLTMVNVVLRR
Ga0209804_11642242	3300026335	Soil	MTCEDDDEKAARQIVPLLASRPARTLARLLPQGVKRSIVTVLLTVTDALRR
Ga0209057_10340405	3300026342	Soil	LTVPSSLVAEDSVMTCEDYDERNEPGIVEKVALLIAPLLASRRDPRAGAVTAPRREEAIVTVLLTMVNVVLRR
Ga0209690_12354552	3300026524	Soil	LTVLSSLVAEMTCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPQDVRKAI
Ga0209806_10470514	3300026529	Soil	ERNGPGIVEKAALLIAPLLASRPIRALARLLPQDVRKAIVTVLLTVANVLRR
Ga0209806_10971871	3300026529	Soil	ERNGPGIVEKAALLIAPLLASRPIRALARLLPRDVRKAIVTVLLTVANVLRR
Ga0209157_10977763	3300026537	Soil	MTCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPRDVRKAIVTVLLTVA
Ga0209157_13468862	3300026537	Soil	GIVEKAALLIAPLLASRPIRALARLLPRDVRKAIVTVLLTVANVLRR
Ga0209161_104519561	3300026548	Soil	LTVLSSLVAEMTCEDYDERNGPGIVEKAALLIAPLLASRPIRALARLLPRDVRKAIVTVLLTVANVLRR
Ga0209648_102310071	3300026551	Grasslands Soil	MTCEDEDERNGAGMVEKAARQIAPLLASRPARTLARLLPQGVKKSIVTLLLTVTDALRR
Ga0179587_107893822	3300026557	Vadose Zone Soil	MTCEDYDERNGPGIVEKAALLIAPLLASRPFRALARLLPRDVRKAIVTVLLTVANVLRR
Ga0209689_13760791	3300027748	Soil	TMTCEDDDEKNGAGMVEKAARQIAPLLASRPARTLTRLLPRGVKKSIVTVLLTVTDALRR
Ga0137415_1000056914	3300028536	Vadose Zone Soil	MTCEDEDERNGAGLVEKAARQIAPLLASRPARTLARLLPQGVKKSIVTLLLTVTDALRR
Ga0307473_109676282	3300031820	Hardwood Forest Soil	MSCEDYEDRNGQSLVEKAARQFASVLASPPIRGLVVLLPQGMRRAIVTVLWTAADVLRR
Ga0307471_1038400601	3300032180	Hardwood Forest Soil	DYDEGNGPGIVEKVAFLIAPLLASRPIRTLAWLLPQDMRKAIVTILLTVANVLRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063513

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences