Metagenome Family F063502

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063502
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	61 residues
Representative Sequence	MEVTVKARLLLTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGY
Number of Associated Samples	73
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	68.99 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	92.25 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.767 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (52.713 % of family members)
Environment Ontology (ENVO)	Unclassified (86.047 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (53.488 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF13202	EF-hand_5	10.08
PF01007	IRK	5.43
PF04392	ABC_sub_bind	2.33
PF13356	Arm-DNA-bind_3	0.78
PF00106	adh_short	0.78
PF00239	Resolvase	0.78
PF06186	DUF992	0.78
PF04909	Amidohydro_2	0.78
PF14023	DUF4239	0.78
PF03625	DUF302	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.33
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.78
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.78
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
All Organisms	root	All Organisms	30.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
cellular organisms	root	All Organisms → cellular organisms	30.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.98 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.55 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.55 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.33 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.78 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.78 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.33 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.55 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.78 %
Methylovirgula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula	0.78 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.55 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.55 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.78 %
unclassified Methylovirgula	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula	0.78 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.78 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.77 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.55 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.55 %
Methylovirgula sp. 4M-Z18	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. 4M-Z18	0.78 %
Bradyrhizobium sp. JYMT SZCCT0428	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0428	0.78 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.78 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10727393	Not Available	591	Open in IMG/M
3300005332\|Ga0066388_104612108	Not Available	701	Open in IMG/M
3300005332\|Ga0066388_108087761	Not Available	525	Open in IMG/M
3300005764\|Ga0066903_107822472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300006797\|Ga0066659_11526478	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300010376\|Ga0126381_100588802	Not Available	1581	Open in IMG/M
3300012208\|Ga0137376_11593436	Not Available	544	Open in IMG/M
3300016270\|Ga0182036_10038533	Not Available	2913	Open in IMG/M
3300016270\|Ga0182036_10558287	Not Available	913	Open in IMG/M
3300016270\|Ga0182036_11737141	Not Available	527	Open in IMG/M
3300016294\|Ga0182041_10407724	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300016294\|Ga0182041_10728140	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300016319\|Ga0182033_10070215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2464	Open in IMG/M
3300016319\|Ga0182033_10794267	Not Available	834	Open in IMG/M
3300016319\|Ga0182033_12095637	Not Available	516	Open in IMG/M
3300016341\|Ga0182035_10166819	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300016341\|Ga0182035_10294479	Not Available	1328	Open in IMG/M
3300016357\|Ga0182032_10177373	All Organisms → cellular organisms → Bacteria → Proteobacteria	1602	Open in IMG/M
3300016357\|Ga0182032_10399381	Not Available	1111	Open in IMG/M
3300016371\|Ga0182034_10932639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. 4M-Z18	748	Open in IMG/M
3300016371\|Ga0182034_11236467	Not Available	650	Open in IMG/M
3300016387\|Ga0182040_10135380	Not Available	1733	Open in IMG/M
3300016387\|Ga0182040_10424019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1049	Open in IMG/M
3300016387\|Ga0182040_11848464	Not Available	517	Open in IMG/M
3300016404\|Ga0182037_10760416	Not Available	833	Open in IMG/M
3300016422\|Ga0182039_11212954	Not Available	682	Open in IMG/M
3300016445\|Ga0182038_11112239	Not Available	702	Open in IMG/M
3300016445\|Ga0182038_11994321	Not Available	525	Open in IMG/M
3300017822\|Ga0187802_10145758	Not Available	903	Open in IMG/M
3300017970\|Ga0187783_10232956	All Organisms → cellular organisms → Bacteria → Proteobacteria	1348	Open in IMG/M
3300017974\|Ga0187777_10618946	Not Available	764	Open in IMG/M
3300017974\|Ga0187777_11135585	Not Available	570	Open in IMG/M
3300017995\|Ga0187816_10490806	Not Available	552	Open in IMG/M
3300018060\|Ga0187765_10124134	All Organisms → cellular organisms → Bacteria → Proteobacteria	1433	Open in IMG/M
3300018060\|Ga0187765_10937623	Not Available	589	Open in IMG/M
3300021560\|Ga0126371_10372992	Not Available	1565	Open in IMG/M
3300021560\|Ga0126371_11399625	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300021560\|Ga0126371_13345242	Not Available	542	Open in IMG/M
3300031544\|Ga0318534_10620365	Not Available	614	Open in IMG/M
3300031545\|Ga0318541_10140808	Not Available	1319	Open in IMG/M
3300031545\|Ga0318541_10851786	Not Available	508	Open in IMG/M
3300031546\|Ga0318538_10289448	Not Available	882	Open in IMG/M
3300031546\|Ga0318538_10363809	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300031572\|Ga0318515_10169899	Not Available	1165	Open in IMG/M
3300031573\|Ga0310915_10135528	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300031573\|Ga0310915_10456928	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300031573\|Ga0310915_10556880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	813	Open in IMG/M
3300031668\|Ga0318542_10189184	Not Available	1035	Open in IMG/M
3300031680\|Ga0318574_10441719	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300031681\|Ga0318572_10104553	Not Available	1601	Open in IMG/M
3300031681\|Ga0318572_10289523	Not Available	967	Open in IMG/M
3300031713\|Ga0318496_10717258	Not Available	551	Open in IMG/M
3300031719\|Ga0306917_10115330	Not Available	1949	Open in IMG/M
3300031719\|Ga0306917_10194831	Not Available	1531	Open in IMG/M
3300031719\|Ga0306917_10273842	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300031719\|Ga0306917_11560865	Not Available	507	Open in IMG/M
3300031724\|Ga0318500_10150573	Not Available	1094	Open in IMG/M
3300031736\|Ga0318501_10428704	Not Available	716	Open in IMG/M
3300031744\|Ga0306918_10060164	Not Available	2565	Open in IMG/M
3300031744\|Ga0306918_10263930	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300031744\|Ga0306918_10894917	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300031744\|Ga0306918_11438745	Not Available	528	Open in IMG/M
3300031748\|Ga0318492_10721835	Not Available	534	Open in IMG/M
3300031768\|Ga0318509_10066509	Not Available	1881	Open in IMG/M
3300031768\|Ga0318509_10345071	Not Available	833	Open in IMG/M
3300031770\|Ga0318521_10561925	Not Available	688	Open in IMG/M
3300031770\|Ga0318521_10907424	Not Available	538	Open in IMG/M
3300031780\|Ga0318508_1207758	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300031781\|Ga0318547_10680163	Not Available	639	Open in IMG/M
3300031782\|Ga0318552_10111101	Not Available	1359	Open in IMG/M
3300031795\|Ga0318557_10242938	Not Available	824	Open in IMG/M
3300031797\|Ga0318550_10479272	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300031798\|Ga0318523_10491356	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300031805\|Ga0318497_10364751	Not Available	807	Open in IMG/M
3300031833\|Ga0310917_10036819	All Organisms → cellular organisms → Bacteria	2932	Open in IMG/M
3300031833\|Ga0310917_10436375	Not Available	891	Open in IMG/M
3300031833\|Ga0310917_11152365	Not Available	516	Open in IMG/M
3300031835\|Ga0318517_10486042	Not Available	556	Open in IMG/M
3300031846\|Ga0318512_10037001	Not Available	2123	Open in IMG/M
3300031846\|Ga0318512_10239454	All Organisms → cellular organisms → Bacteria → Proteobacteria	894	Open in IMG/M
3300031860\|Ga0318495_10196751	Not Available	907	Open in IMG/M
3300031879\|Ga0306919_10767469	Not Available	742	Open in IMG/M
3300031880\|Ga0318544_10451399	Not Available	500	Open in IMG/M
3300031890\|Ga0306925_10350085	Not Available	1586	Open in IMG/M
3300031890\|Ga0306925_10384815	Not Available	1505	Open in IMG/M
3300031910\|Ga0306923_10033330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5575	Open in IMG/M
3300031910\|Ga0306923_10686705	Not Available	1141	Open in IMG/M
3300031910\|Ga0306923_10743257	Not Available	1088	Open in IMG/M
3300031912\|Ga0306921_10283227	Not Available	1941	Open in IMG/M
3300031912\|Ga0306921_11606375	Not Available	706	Open in IMG/M
3300031912\|Ga0306921_12459939	Not Available	541	Open in IMG/M
3300031942\|Ga0310916_10150990	All Organisms → cellular organisms → Bacteria	1916	Open in IMG/M
3300031942\|Ga0310916_10159996	Not Available	1864	Open in IMG/M
3300031942\|Ga0310916_10389546	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300031942\|Ga0310916_10522792	All Organisms → cellular organisms → Bacteria → Proteobacteria	1010	Open in IMG/M
3300031942\|Ga0310916_11657895	Not Available	518	Open in IMG/M
3300031945\|Ga0310913_10003149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	9010	Open in IMG/M
3300031945\|Ga0310913_10189017	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300031945\|Ga0310913_10725148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	702	Open in IMG/M
3300031945\|Ga0310913_10812110	Not Available	659	Open in IMG/M
3300031947\|Ga0310909_10045992	All Organisms → cellular organisms → Bacteria → Proteobacteria	3329	Open in IMG/M
3300031947\|Ga0310909_10451099	Not Available	1079	Open in IMG/M
3300031947\|Ga0310909_10722604	Not Available	826	Open in IMG/M
3300031947\|Ga0310909_11230686	Not Available	604	Open in IMG/M
3300031959\|Ga0318530_10098840	Not Available	1158	Open in IMG/M
3300031981\|Ga0318531_10558578	Not Available	518	Open in IMG/M
3300032001\|Ga0306922_10238836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0428	1952	Open in IMG/M
3300032001\|Ga0306922_10239268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1950	Open in IMG/M
3300032001\|Ga0306922_11780610	Not Available	607	Open in IMG/M
3300032010\|Ga0318569_10056269	Not Available	1712	Open in IMG/M
3300032010\|Ga0318569_10503193	Not Available	564	Open in IMG/M
3300032035\|Ga0310911_10603933	Not Available	636	Open in IMG/M
3300032042\|Ga0318545_10204667	Not Available	706	Open in IMG/M
3300032052\|Ga0318506_10517647	Not Available	529	Open in IMG/M
3300032054\|Ga0318570_10294919	Not Available	737	Open in IMG/M
3300032055\|Ga0318575_10727183	Not Available	502	Open in IMG/M
3300032059\|Ga0318533_10571363	Not Available	829	Open in IMG/M
3300032059\|Ga0318533_10896631	Not Available	650	Open in IMG/M
3300032063\|Ga0318504_10327329	Not Available	727	Open in IMG/M
3300032063\|Ga0318504_10344688	Not Available	707	Open in IMG/M
3300032076\|Ga0306924_10277019	All Organisms → cellular organisms → Bacteria	1926	Open in IMG/M
3300032076\|Ga0306924_10523537	Not Available	1348	Open in IMG/M
3300032091\|Ga0318577_10185092	All Organisms → cellular organisms → Bacteria → Proteobacteria	995	Open in IMG/M
3300032180\|Ga0307471_102697620	Not Available	630	Open in IMG/M
3300033289\|Ga0310914_10136630	All Organisms → cellular organisms → Bacteria	2149	Open in IMG/M
3300033289\|Ga0310914_10648770	Not Available	949	Open in IMG/M
3300033289\|Ga0310914_10822998	Not Available	827	Open in IMG/M
3300033289\|Ga0310914_11582309	Not Available	559	Open in IMG/M
3300033290\|Ga0318519_10026661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2670	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.45%
Aquatic	Environmental → Aquatic	1.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.45%
Freshwater	Environmental → Aquatic → Freshwater	1.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.47%
Loam	Environmental → Terrestrial → Soil → Loam	3.10%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.55%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	86.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.10%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	52.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.10%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.55%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_107273932	3300004633	Tropical Forest Soil	MEGTVKARLLLTSALFLIAQIPAQAQVTVDVTKITCEQLSMDELPFTSRDIILWLSGYYH
Ga0066388_1046121083	3300005332	Tropical Forest Soil	VKLRLLLTSALLLFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTY
Ga0066388_1080877611	3300005332	Tropical Forest Soil	MEVTVKARLLLTSALFLFAQVPTMQAQVTVDVAKITCDQLFKEELPWTSTYIILW
Ga0066903_1078224722	3300005764	Tropical Forest Soil	MEVIVKARLLLTSALLMFVQIPAPRAQVTVDVVKITCEQLSMEELPFSSREVI
Ga0066659_115264781	3300006797	Soil	VERLTVYRGMEVIVKARLLLTSALLMFVQIPVPQAQVTIDVVKITCEQLSMEELPFSSKDVIF
Ga0126381_1005888021	3300010376	Tropical Forest Soil	MEVTVKRRLLLTSALLMFVQIPAPRAQVTVDVVKITCEQLSMEELPFTSRDVILWLSGYYHREHDNTVIEP
Ga0137376_115934361	3300012208	Vadose Zone Soil	VERLAVYRGMEVIVKARLLLTSALSIFVQIPAPQAQVTVDVVKITCEQLSHEELPFSSRDIILWLSGYYHHEHNNTVI
Ga0182036_100385331	3300016270	Soil	MVGNSDAKPAKPLEVTVKLRLLLTSALLLFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGY
Ga0182036_105582871	3300016270	Soil	MEVIVKARLLLTSALLMFVQIPAPQAQSVTVDVAKITYDQLFKEELPWTSTYIILWLSGYYHREHNNTIIE
Ga0182036_117371411	3300016270	Soil	VKGRLLLTSALFLFVQIPPMRAQVTVDVAKITCDQLFKEELPWTSTYIILWLSGYYHRE
Ga0182041_104077241	3300016294	Soil	VKFRLLFTSALLVFAQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSG
Ga0182041_107281402	3300016294	Soil	MEVIVKARLLLTSALLMFVQIPAPRAQVTVDVVKITCEQLSMEELPFSSRDVIFWLSGY
Ga0182033_100702157	3300016319	Soil	MEVIVKARLLLTSALLMFVQIPAPQAQSVTVDVAKITYDQLFKEELPWTSTYIILWLSGYYHREH
Ga0182033_107942671	3300016319	Soil	VKARLLLTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGY
Ga0182033_120956371	3300016319	Soil	VKGRLLLTSALFLFVQIPPMRAQVTVDVAKITCDQLFKEELPWTSTYIILWLSGYYHREHNNTI
Ga0182035_101668191	3300016341	Soil	VKARLLLTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYI
Ga0182035_102944793	3300016341	Soil	MTNLLEEAISCMKVTVKLRLLLTSALLMFVQIPAPQAQVTVDVVKITCEQLSMEELPFSSRDVIFWLSGYY
Ga0182032_101773733	3300016357	Soil	VKARLLLTSALLMFVQIPAPRAQVTVDVVKITCEQLSMEELPFSSRDVIFWLSGYYHREH
Ga0182032_103993812	3300016357	Soil	VKARLLFTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTS
Ga0182034_109326391	3300016371	Soil	LIRCLSAKVYKPMEVIVKARLLLTSALLMFVQIPAPRAQVTVDVVKITCEQLSMEELPFSSRDVIFWLSGY
Ga0182034_112364671	3300016371	Soil	MEGTVKARLLFTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGYYHRE
Ga0182040_101353801	3300016387	Soil	MTNLLEEAISCMKVTVKLRLLLTSALLMFVQIPAPQAQVTVDVVKITCEQLSMEELPFSSREVILWLSGY
Ga0182040_104240193	3300016387	Soil	MEGTVKLRLLLTSALFVFAQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILW
Ga0182040_118484641	3300016387	Soil	VIVKARLLLTCALLMFVQIPAPQAQVTVDVAKVTCDELFKEELQWTAGEIIL
Ga0182037_107604162	3300016404	Soil	MEGIVKARLLLTSALFVFAQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYI
Ga0182039_112129542	3300016422	Soil	LMRCLSAKVYKPMEVIVKARLLLTSALLMFVQIPAPRAQVTVDVVKITCEQLSMEELPFSSRDVIFLLSGYYHREHNNTVIEPGAIKRDAN
Ga0182038_111122391	3300016445	Soil	MKVRLLLTSALLMLVQIPAPRAQVTVDVVKITCEQLSMEELPITSRDVILWLSGYYHREHNN
Ga0182038_119943211	3300016445	Soil	LMRCLSAKVYKPMEVIVKARLLLTSALLMFVQIPAPRAQVTVDVVKITCEQLSMEELPFSSRDVIFWLSGY
Ga0187802_101457581	3300017822	Freshwater Sediment	VKARLLLTSALLMFAQIPAPQAQVTVDVAKVTCDQLIMAALPFTARDV
Ga0187783_102329561	3300017970	Tropical Peatland	VKARLLLTSALLMFVQIPAPQTQVTVDVAKVTCDELFKEELQWTSGEIILWLSGYYH
Ga0187777_106189463	3300017974	Tropical Peatland	VNARLLLTSALLFVQIPAPQAQVTVDFAKVTCDQLFKEEILWTARDIILWLSGYYHGEHN
Ga0187777_111355851	3300017974	Tropical Peatland	MEVIVKARPLLASALLMFVQIPAPQAQSVTVDVAKVTCDELFKEELQWTSGEIIFWLSGYYH
Ga0187816_104908061	3300017995	Freshwater Sediment	VKARLLLTSALLMFAQIPAPQAQVTVDVAKVTCDELFKEETQWTSGE
Ga0187765_101241343	3300018060	Tropical Peatland	VKLRLLLTSALLMFVQIPAPRAQVTVDVAKISCEQLLMQALPWTSRDIVLWLSGYYHGKH
Ga0187765_109376231	3300018060	Tropical Peatland	MFPIKPTEVIVKLGLLLTSAFLMFVQIPAPQAQVTVDLVKITCEQLLTAALPLTSRDVILWLSGYYHGKH
Ga0126371_103729921	3300021560	Tropical Forest Soil	MEVTVKLRLLLTSALFVFVQVSAPQAQVTVDVVKITCEQLTMAALPFTSRDVILWLSGYYHGKH
Ga0126371_113996252	3300021560	Tropical Forest Soil	VKTRLLLTSALLIFVQIPAPQAQVTVDVAKITCQQIVMGELPWTQRDVVLWLSGYYNGKR
Ga0126371_133452422	3300021560	Tropical Forest Soil	MVGNSDAKPAKPLEVTVKLRLLLTSALLLFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGYYHR
Ga0318534_106203652	3300031544	Soil	MEVIVKARLLLTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYI
Ga0318541_101408084	3300031545	Soil	MTNLLEEAISCMKVTVKLRLLLTSALLMFVQIPAPQAQVTVDVVKITCEQLSMEELPFSSRDVIFWLSGYYHREHNNT
Ga0318541_108517861	3300031545	Soil	LIRCLSAKVYKPMEVIVKARLLLTSALLMFVQIPAPRAQVTVDVVKITCEQLSMEELPFSSRDVIFWLSGYYHREHNNT
Ga0318538_102894482	3300031546	Soil	MEGTVKARLLFTSALLMFVQIPAPQAQSVTVDVDKITCDQLFKEELPWTSTYIILWLSGYYHREHN
Ga0318538_103638091	3300031546	Soil	VKFRLLFTSALLVFAQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILW
Ga0318515_101698991	3300031572	Soil	MEGTVKARLLFTSALLMFVQIPAPQAQSVTVDVDKITCDQLFKEELPWTSTYIILWLSGYYHRE
Ga0310915_101355283	3300031573	Soil	VKARLLLTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIIL
Ga0310915_104569281	3300031573	Soil	VKVRLLLSSASFLFVQIPAPQAQSVTVDVAKITCDQLFKEELPWT
Ga0310915_105568802	3300031573	Soil	LIRCLSAKVYKPMEVIVKARLLLTSALLMFVQIPAPRAQVTVDVVKITCEQLSMEELPFSSRDVIFWLS
Ga0318542_101891842	3300031668	Soil	MEGTVKARLLFTSALLMFVQIPAPQAQSVTVDVDKITCDQLFKEELPWTSTYIILWLSGYYHREHNNTII
Ga0318574_104417191	3300031680	Soil	VKFRLLFTSALLVFAQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGYY
Ga0318572_101045534	3300031681	Soil	VKARLLFTSALLMFVQIPAPQAQSVTVDVDKITCDQLFKEELPWTSTYIILWLSGYYHRE
Ga0318572_102895231	3300031681	Soil	VKARLLLTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTST
Ga0318496_107172581	3300031713	Soil	VKARLLFTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPW
Ga0306917_101153303	3300031719	Soil	VKARLLFTSALLMFVQIPAPQAQSVTVDVDKITCDQLFKEELPWA
Ga0306917_101948315	3300031719	Soil	MEGTVKVRLLLTSALFLFVQIPTMQAQVTVDVVRITCEQLEMQALPWTSRDIVLWLSGYYHGKR
Ga0306917_102738422	3300031719	Soil	VKFRLLFTSALLVFAQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLS
Ga0306917_115608651	3300031719	Soil	MEGIVKVRPLLTSALMMFMQIPAPRAQVTGEQLRMAALPWNSRDIVLWLSGYYHGKHDKTII
Ga0318500_101505731	3300031724	Soil	MEGTVKARLLFTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILW
Ga0318501_104287042	3300031736	Soil	MEVIVKARLLLTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGY
Ga0306918_100601646	3300031744	Soil	MEVIVKARLLLTSALLMFVQIPAPQAQSVTVDVAKITYDQLFKEELPWTSTYIILWLSGYYHREHNNTII
Ga0306918_102639304	3300031744	Soil	VKVRLLLSSASFLFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGYYHR
Ga0306918_108949173	3300031744	Soil	VKFRLLFTSALLVFAQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWL
Ga0306918_114387452	3300031744	Soil	MEVTVKLRLLLTSALFLFAQVPTMQAQSVTVDVAKITCDQLFKEQLPWTSTYIILW
Ga0318492_107218351	3300031748	Soil	MEGTVKARLLFTSALLVFVQIPAPQAQSVTVDVDKITCDQLFKEELPWTSTYIILWLS
Ga0318509_100665095	3300031768	Soil	MTNLLEEAISCMKVTVKLRLLLTSALFLFAQVPTMQAQVTVDVVKITCEQLSMEELPFSSRDVIFWLSGYYHREHNN
Ga0318509_103450713	3300031768	Soil	MVDNLDAKSAKPMEVIVKARLLLTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILCEHNNTIIEPGALKK
Ga0318521_105619253	3300031770	Soil	VKVRLLLSSASFLFVQIPAPQAQSVTVDVAKITCDQLFKEELP
Ga0318521_109074241	3300031770	Soil	MEGTVKARLLFTSALLMFVQIPAPQAQSVTVDVDKITCDQLFKEELPWTSTYII
Ga0318508_12077581	3300031780	Soil	VKFRLLFTSALLVFAQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTY
Ga0318547_106801631	3300031781	Soil	LIRCLSAKVYKPMEVIVKARLLLTSALLMFVQIPAPRAQVTVDVVKITCEQLSMEELPFSSRDVIFWLSGYYH
Ga0318552_101111011	3300031782	Soil	MVGNSDAKPAKPLEVTVKLRLLLTSALLLFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGYYHREHN
Ga0318557_102429381	3300031795	Soil	VKARLLFTSALLMFVQIPAPQAQSVTVDVDKITCDQLFKEELPWTSTYIILWLSGYYHREHNNTII
Ga0318550_104792722	3300031797	Soil	VKFRLLFTSALLVFAQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYII
Ga0318523_104913562	3300031798	Soil	VKFRLLFTSALLVFAQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYI
Ga0318497_103647511	3300031805	Soil	MEGTVKARLLFTSALLMFVQIPAPQAQSVTVDVDKITCDQLFKEELPWTSTYIILWLSGYYHREHNNTI
Ga0310917_100368191	3300031833	Soil	VKVRLLLSSASFLFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILW
Ga0310917_104363753	3300031833	Soil	VIVKARLLLTSALLMLVQIPTPQAQVTVDFAKVTCDQLFKEELLWTARDIILWFSGYYHGEHNNTIVEPTA
Ga0310917_111523651	3300031833	Soil	MEGTVKARLLFTSALLMFVQIPAPQAQSVTVDVDKITCDQLFKEELPWTSTYIILWL
Ga0318517_104860422	3300031835	Soil	MEVIVKARLLLTSALLMFVQIPAPQAQSVTVDVAKITYDQLFKEELPWTSTYI
Ga0318512_100370011	3300031846	Soil	MVGNSDAKPAKPLEVTVKLRLLLTSALLLFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGYYH
Ga0318512_102394541	3300031846	Soil	MEVIVKARLLLTSALLMFVQIPAPRAQVTVDVVKITCEQLSMEELPFSSRDVIFWLSGYYHREH
Ga0318495_101967513	3300031860	Soil	MVGNSDAKPAKPLEVTVKLRLLLTSALLLFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILW
Ga0306919_107674691	3300031879	Soil	MEATVKLRLLLISALLMFVQIPAPQAQVTVDVSKITCEQLRMAALPWTSRDIVLWLSG
Ga0318544_104513991	3300031880	Soil	MEGTVKARLLFTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLS
Ga0306925_103500851	3300031890	Soil	MTNLLEEAISCMKVTVKLRLLLTSALLMFVQIPAPQAQVTVDVVKITCEQLSMEELPFSSRDVIFWLSGYYHRE
Ga0306925_103848153	3300031890	Soil	VKARLLLTSALLMFVQIPAPQAQVTVDVVKITCEQLSLEQLPFSSRDVILWLSGYYHREHDN
Ga0306923_100333309	3300031910	Soil	VKFRLLFTSALLVFAQIPAPQAQSVTVDVAKITCDQLFKEELPWTS
Ga0306923_106867052	3300031910	Soil	MEATVKLRLLLTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGYYHR
Ga0306923_107432571	3300031910	Soil	MEGIVKARLLLTSALFVFAQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGYYH
Ga0306921_102832271	3300031912	Soil	MTNLLEEAISCMKVTVKLRLLLTSALLMFVQIPAPQAQVTVDVVKITCEQLSMEELPFSSRDVIFWLSGYYHR
Ga0306921_116063752	3300031912	Soil	VKARLLLTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGYY
Ga0306921_124599391	3300031912	Soil	MVGNSDAKPAKPLEVTVKLRLLLTSALLLFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGYY
Ga0310916_101509901	3300031942	Soil	MEVTVKARLLLTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGY
Ga0310916_101599961	3300031942	Soil	VKARLLFTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGYY
Ga0310916_103895462	3300031942	Soil	VKFRLLFTSALLVFAQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGY
Ga0310916_105227921	3300031942	Soil	MEVIVKARLLLTSALLMFVQIPAPRAQVTVDVVKITCEQLSMEELPFSSRDVIFWLS
Ga0310916_116578951	3300031942	Soil	VKVRLLLTSALLMFMQIPAPRAQVTVDVVKITCEQLRMAALPWNSRDIVLWLSGYYHG
Ga0310913_1000314914	3300031945	Soil	VKARLLFTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGYYHRE
Ga0310913_101890173	3300031945	Soil	VKFRLLFTSALLVFAQIPAPQAQSVTVDVAKITCDQLFKEELPWTST
Ga0310913_107251481	3300031945	Soil	LIRCLSAKVYKPMEVIVKARLLLTSALLMFVQIPAPRAQVTVDVVKITCEQLSMEELPFSSRDVIFWLSGYYHR
Ga0310913_108121101	3300031945	Soil	VKARLLLTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILW
Ga0310909_100459921	3300031947	Soil	MVDNLDAKSAKPMEVIVKARLLLTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGYYHREHNNTIIE
Ga0310909_104510991	3300031947	Soil	VKARLLLTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSG
Ga0310909_107226041	3300031947	Soil	MEVIVKARLLLTSALLLFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYII
Ga0310909_112306861	3300031947	Soil	VKVRPLLTSALLMFMQIPAPRAQVTVDVVKITCEQLRMAVLPWNSRDIVLWLSG
Ga0318530_100988401	3300031959	Soil	MEGTVKARLLFTSALLMFVQIPAPQAQSVTVDVDKITCDQLFKEELPWTSTY
Ga0318531_105585781	3300031981	Soil	VKARLLFTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLS
Ga0306922_102388364	3300032001	Soil	MTNLLEEAISCMKVTVKLRLLLTSALLMFVQIPAPQAQVTVDVVKITCEQLSMEELPFSSRD
Ga0306922_102392685	3300032001	Soil	MEVIVKARLLLTSALLLFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGYYHREHNNTI
Ga0306922_117806102	3300032001	Soil	VKFRLLLTSALFLFVQIPTVQAQVTVDVVKITCEQLFKEELPWTSTYIILWLSGYYHRETQQHDHRTRRDE
Ga0318569_100562693	3300032010	Soil	MVGNSDAKPAKPLEVTVKLRLLLTSALLLFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGYYHRE
Ga0318569_105031931	3300032010	Soil	VKARLLFTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILW
Ga0310911_106039332	3300032035	Soil	LIRCLSAKVYKPMEVIVKARLLLTSALLMFVQIPAPRAQVTVDVVKITCEQLSMEELPFSSRDVIFWLSGYYHREHN
Ga0318545_102046671	3300032042	Soil	MEGTVKARLLFTSALLMFVQIPAPQAQSVTVDVDKITCDQLFKEELPWTSTYIILWLSGYYHR
Ga0318506_105176471	3300032052	Soil	MEGTVKARLLFTSALLVFVQIPAPQAQSVTVDVDKITCDQLFKEELPWTSTYIILWLSGYYHREHN
Ga0318570_102949191	3300032054	Soil	VKARLLFTSALLMFVQIPAPQAQSVTVDVDKITCDQLFKEELPWTSTYI
Ga0318575_107271833	3300032055	Soil	MTNLLEEAISCMKVTVKLRLLLTSALFLFAQVPTMQAQVTVDVVKITCEQLSMEELPFSSRDV
Ga0318533_105713631	3300032059	Soil	MEVIVKARLLLTSALLLFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGYYHREHNNT
Ga0318533_108966312	3300032059	Soil	VKARLLLTSALLMFVQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYII
Ga0318504_103273291	3300032063	Soil	MTNLLEEAISCMKVTVKLRLLLTSALLMFVQIPAPQAQVTVDVVKITCEQLSMEELPFSSRDVIFWLSGYYHREHNN
Ga0318504_103446882	3300032063	Soil	MEGTVKARLLFTSALLVFVQIPAPQAQSVTVDVDKITCDQLFKEELPWTSTYI
Ga0306924_102770191	3300032076	Soil	VKFRLLFTSALLVFAQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTLSGYY
Ga0306924_105235373	3300032076	Soil	VKARLLLTSALFVFAQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGYYHREHNNTI
Ga0318577_101850922	3300032091	Soil	MRCLSAKVYKPMEVIVKARLLLTSALLMFVQIPAPRAQVTVDVVKITCEQLSMEELPFSS
Ga0307471_1026976201	3300032180	Hardwood Forest Soil	VERLAVYRGMEVIVKARLLLTSALLMFVQIPAPQAQVTVDVAKITCEQFSMEELPFNSRD
Ga0310914_101366304	3300033289	Soil	VKFRLLFTSALLVFAQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGYYHREHNN
Ga0310914_106487701	3300033289	Soil	MTNLLEEAISCMKVTVKLRLLLTSALLMFVQIPAPQAQVTVDVVKITCEQLSMEELPFSSRDVIFWLSGYYHREHN
Ga0310914_108229981	3300033289	Soil	VKARLLLTSALFVFAQIPAPQAQSVTVDVAKITCDQLFKEELPWTSTYIILWLSGYYHREHNNT
Ga0310914_115823091	3300033289	Soil	MEGTVKARLLLASALFMFVQIPTMQAQVTVDVVKITCEQLEMQALPFSSRDIVFWLSGYYHREHNNTVIEPDA
Ga0318519_100266611	3300033290	Soil	VKARLLFTSALLMFVQIPAPQAQSVTVDVDKITCDQLFKEELPWTSTYIILWLSGYYHREHNN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063502

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences