Metagenome / Metatranscriptome Family F063474

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063474
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	63 residues
Representative Sequence	MNMIVVFEDQATKQCQESKPYAFASALEVRCLCGNLVHPIPGAWCPQCGAKVVEVRPERR
Number of Associated Samples	92
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.97 %
% of genes near scaffold ends (potentially truncated)	25.58 %
% of genes from short scaffolds (< 2000 bps)	82.17 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.674 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (31.008 % of family members)
Environment Ontology (ENVO)	Unclassified (34.109 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.860 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 27.27% Coil/Unstructured: 72.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
d.343.1.1: MM3350-like	d2i1sa1	2i1s	0.59092
b.7.1.1: PLC-like (P variant)	d1rlwa_	1rlw	0.58178
d.26.1.2: GreA transcript cleavage factor, C-terminal domain	d2f23a2	2f23	0.56738
d.26.1.2: GreA transcript cleavage factor, C-terminal domain	d1grja2	1grj	0.56252
b.86.1.1: Hedgehog C-terminal (Hog) autoprocessing domain	d6tyya_	6tyy	0.56126

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00072	Response_reg	5.43
PF13545	HTH_Crp_2	2.33
PF08401	ArdcN	1.55
PF01381	HTH_3	1.55
PF01757	Acyl_transf_3	1.55
PF10825	DUF2752	0.78
PF07519	Tannase	0.78
PF03328	HpcH_HpaI	0.78
PF13384	HTH_23	0.78
PF01261	AP_endonuc_2	0.78
PF13751	DDE_Tnp_1_6	0.78
PF00574	CLP_protease	0.78
PF13683	rve_3	0.78
PF08241	Methyltransf_11	0.78
PF07883	Cupin_2	0.78
PF10431	ClpB_D2-small	0.78
PF04185	Phosphoesterase	0.78
PF06439	3keto-disac_hyd	0.78
PF08308	PEGA	0.78
PF14559	TPR_19	0.78
PF13360	PQQ_2	0.78
PF07238	PilZ	0.78
PF01751	Toprim	0.78
PF00486	Trans_reg_C	0.78
PF00027	cNMP_binding	0.78
PF00793	DAHP_synth_1	0.78
PF00351	Biopterin_H	0.78
PF10079	BshC	0.78
PF13426	PAS_9	0.78
PF00196	GerE	0.78
PF00501	AMP-binding	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.55
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	1.55
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	1.55
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.78
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	0.78
COG3186	Phenylalanine-4-hydroxylase	Amino acid transport and metabolism [E]	0.78
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.78
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.67 %
Unclassified	root	N/A	2.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.67 %
Unclassified	root	N/A	2.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.67 %
Unclassified	root	N/A	2.33 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	82.95 %
Unclassified	root	N/A	2.33 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	73.64 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.65 %
Unclassified	root	N/A	2.33 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	73.64 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.33 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.33 %
Unclassified	root	N/A	2.33 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	73.64 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.33 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	2.33 %
Unclassified	root	N/A	2.33 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	73.64 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.33 %
Unclassified	root	N/A	2.33 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	73.64 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.33 %
Unclassified	root	N/A	2.33 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.78 %
unclassified Candidatus Solibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	73.64 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.33 %
Unclassified	root	N/A	2.33 %
Candidatus Solibacter sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	0.78 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10003940	All Organisms → cellular organisms → Bacteria	10582	Open in IMG/M
3300004099\|Ga0058900_1231249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1512	Open in IMG/M
3300004101\|Ga0058896_1391930	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	965	Open in IMG/M
3300004139\|Ga0058897_11038758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300004157\|Ga0062590_102577814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300004472\|Ga0068974_1381611	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1620	Open in IMG/M
3300004973\|Ga0072322_1004511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300005166\|Ga0066674_10391780	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300005167\|Ga0066672_10133283	All Organisms → cellular organisms → Bacteria	1546	Open in IMG/M
3300005174\|Ga0066680_10929545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300005178\|Ga0066688_10402903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300005439\|Ga0070711_100059419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2654	Open in IMG/M
3300005444\|Ga0070694_100415765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1055	Open in IMG/M
3300005445\|Ga0070708_100091542	All Organisms → cellular organisms → Bacteria → Acidobacteria	2770	Open in IMG/M
3300005445\|Ga0070708_100281497	Not Available	1565	Open in IMG/M
3300005446\|Ga0066686_10682391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300005450\|Ga0066682_10206973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1258	Open in IMG/M
3300005518\|Ga0070699_100389453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1259	Open in IMG/M
3300005518\|Ga0070699_100595769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1008	Open in IMG/M
3300005537\|Ga0070730_10014853	All Organisms → cellular organisms → Bacteria → Acidobacteria	6239	Open in IMG/M
3300005542\|Ga0070732_10026708	All Organisms → cellular organisms → Bacteria	3273	Open in IMG/M
3300005542\|Ga0070732_10190075	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300005545\|Ga0070695_100250777	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300005546\|Ga0070696_100005861	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8203	Open in IMG/M
3300005586\|Ga0066691_10554832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300005586\|Ga0066691_10919225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300006052\|Ga0075029_100807455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300006059\|Ga0075017_100242139	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300006804\|Ga0079221_11072705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300006854\|Ga0075425_100756951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1114	Open in IMG/M
3300006903\|Ga0075426_10122354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1870	Open in IMG/M
3300006904\|Ga0075424_100171244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2303	Open in IMG/M
3300006914\|Ga0075436_101324471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300007076\|Ga0075435_101115231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300007258\|Ga0099793_10142934	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300009038\|Ga0099829_10323588	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	1267	Open in IMG/M
3300009038\|Ga0099829_10509512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999	Open in IMG/M
3300009038\|Ga0099829_11207438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300009038\|Ga0099829_11604638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300009088\|Ga0099830_10349974	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1188	Open in IMG/M
3300009088\|Ga0099830_11089942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300009088\|Ga0099830_11186113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300009088\|Ga0099830_11358348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300009089\|Ga0099828_11377407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300009137\|Ga0066709_100061077	All Organisms → cellular organisms → Bacteria	4345	Open in IMG/M
3300009143\|Ga0099792_10460184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300009524\|Ga0116225_1079254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1540	Open in IMG/M
3300010379\|Ga0136449_100072840	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7343	Open in IMG/M
3300011120\|Ga0150983_14248554	All Organisms → cellular organisms → Bacteria	1719	Open in IMG/M
3300011120\|Ga0150983_14784707	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300011120\|Ga0150983_14845201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300011120\|Ga0150983_14900387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300011120\|Ga0150983_15655315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300011270\|Ga0137391_10761467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300011270\|Ga0137391_11416156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300011271\|Ga0137393_11100403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300011271\|Ga0137393_11721221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300012096\|Ga0137389_11270416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300012199\|Ga0137383_10640651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300012203\|Ga0137399_10095056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2293	Open in IMG/M
3300012203\|Ga0137399_11785544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300012205\|Ga0137362_10461027	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1100	Open in IMG/M
3300012210\|Ga0137378_10272726	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1574	Open in IMG/M
3300012354\|Ga0137366_10281755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1226	Open in IMG/M
3300012361\|Ga0137360_10904072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300012361\|Ga0137360_11335908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300012361\|Ga0137360_11558415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300012361\|Ga0137360_11857465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300012362\|Ga0137361_10870860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300012362\|Ga0137361_10972843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300012363\|Ga0137390_11070400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300012363\|Ga0137390_11207498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300012685\|Ga0137397_10931184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300012685\|Ga0137397_11102464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300012918\|Ga0137396_10666005	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300012922\|Ga0137394_11432782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300012927\|Ga0137416_10690696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300012927\|Ga0137416_11660343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300012960\|Ga0164301_11195301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300014158\|Ga0181521_10255306	Not Available	923	Open in IMG/M
3300014638\|Ga0181536_10292430	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300015054\|Ga0137420_1359472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1445	Open in IMG/M
3300017822\|Ga0187802_10260971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300017928\|Ga0187806_1255389	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300017943\|Ga0187819_10060198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2255	Open in IMG/M
3300017955\|Ga0187817_10950760	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300018086\|Ga0187769_10005087	All Organisms → cellular organisms → Bacteria	7999	Open in IMG/M
3300018431\|Ga0066655_10505705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300020579\|Ga0210407_10001025	All Organisms → cellular organisms → Bacteria	27700	Open in IMG/M
3300020579\|Ga0210407_10004486	All Organisms → cellular organisms → Bacteria	10981	Open in IMG/M
3300020579\|Ga0210407_10649215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300020580\|Ga0210403_10176646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1750	Open in IMG/M
3300021168\|Ga0210406_10192887	All Organisms → cellular organisms → Bacteria	1692	Open in IMG/M
3300021168\|Ga0210406_10967796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300021170\|Ga0210400_10486750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300021401\|Ga0210393_10351412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1200	Open in IMG/M
3300021432\|Ga0210384_10706278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	902	Open in IMG/M
3300021559\|Ga0210409_10255444	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1586	Open in IMG/M
3300021559\|Ga0210409_10762953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300024283\|Ga0247670_1000710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7234	Open in IMG/M
3300025922\|Ga0207646_11831531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300026551\|Ga0209648_10314476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1109	Open in IMG/M
3300026551\|Ga0209648_10501853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300026551\|Ga0209648_10505044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300027497\|Ga0208199_1000168	All Organisms → cellular organisms → Bacteria	27044	Open in IMG/M
3300027842\|Ga0209580_10161834	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300027846\|Ga0209180_10278734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	960	Open in IMG/M
3300027854\|Ga0209517_10030350	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4562	Open in IMG/M
3300027911\|Ga0209698_10427677	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1032	Open in IMG/M
3300028536\|Ga0137415_10033693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5032	Open in IMG/M
3300028536\|Ga0137415_10479691	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1051	Open in IMG/M
3300031231\|Ga0170824_121576548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1565	Open in IMG/M
3300031708\|Ga0310686_111611206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1601	Open in IMG/M
3300031754\|Ga0307475_10669553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300031962\|Ga0307479_10356714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1446	Open in IMG/M
3300031962\|Ga0307479_10832144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300031962\|Ga0307479_10989112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300031962\|Ga0307479_11476050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300032160\|Ga0311301_10126897	All Organisms → cellular organisms → Bacteria → Acidobacteria	4768	Open in IMG/M
3300032160\|Ga0311301_10324995	All Organisms → cellular organisms → Bacteria	2435	Open in IMG/M
3300032180\|Ga0307471_100979145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1013	Open in IMG/M
3300032515\|Ga0348332_11786546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300032782\|Ga0335082_11686877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300032783\|Ga0335079_10048808	Not Available	4850	Open in IMG/M
3300032783\|Ga0335079_11630592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300032828\|Ga0335080_10419309	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300033004\|Ga0335084_11005537	All Organisms → cellular organisms → Bacteria → Acidobacteria	840	Open in IMG/M
3300033402\|Ga0326728_10021548	All Organisms → cellular organisms → Bacteria → Acidobacteria	12096	Open in IMG/M
3300033402\|Ga0326728_10038085	All Organisms → cellular organisms → Bacteria → Acidobacteria	7657	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.12%
Host-Associated	Host-Associated	3.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.15%
Aquatic	Environmental → Aquatic	6.98%
Plants	Host-Associated → Plants	3.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.82%
Freshwater	Environmental → Aquatic → Freshwater	4.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.88%
Sediment	Environmental → Aquatic → Sediment	2.33%
Peat	Environmental → Terrestrial → Peat	1.55%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.99%
Loam	Environmental → Terrestrial → Soil → Loam	13.18%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.30%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.20%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.10%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.55%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004099	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004101	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF228 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004472	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004973	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 19 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100039402	3300000567	Peatlands Soil	MNIIVVFEDQATKQRQDGKPYAFASALEVPCLCGNLIHPFPGAWCTGCGAKVVEVRQQENRTR*
Ga0058900_12312492	3300004099	Forest Soil	MNVIVVFEDPATRHQHESNPYAFASALDVRCMCGNLIHPIPGAWCTQCGLKVLEVRQE*
Ga0058896_13919301	3300004101	Forest Soil	VKKTAPPSRNSAMNMIVVFEDQATKQYQKSKPYAFATALDVQCPCGNLIHPIPGAWCTQCGLKVLEVRQE*
Ga0058897_110387582	3300004139	Forest Soil	RNFPMNMIVVFEDQATKQCRESEPYAFASALDVQCPCGNLIHPIPGAWCPQCGTKVVEVRPESRTERLSIH*
Ga0062590_1025778142	3300004157	Soil	MNIVVVFENQATKHCQDAKPYAFASALEVLCPCGNLIHPIPGAWCTHCGLKVLEVRQE*
Ga0068974_13816111	3300004472	Peatlands Soil	MNMIVVFEDQATKQRQDGKPYAFASALEVPCLCGNLIHPFPGAWCTGCGAKVVEVRQQENRTR*
Ga0072322_10045111	3300004973	Peatlands Soil	MIVVFEDQATKQRQDGKPYAFASALEVPCLCGNLIHPFPGAWCTGCGAKVVEVRQQENRTR*
Ga0066674_103917802	3300005166	Soil	MNMIVIFENTATRQCQEGKPYLFATALKVPCLCGNFIHPIPGAWCTQCGLKVLEVRTDFADDKGN
Ga0066672_101332831	3300005167	Soil	MNMIVIFEDQATKHCQEGKPYLFASALKVRCLCGNLIHPIPGAWCTQCGLKVLEVRTRRT
Ga0066680_109295452	3300005174	Soil	MNLVVIFEDPATKLCREGKPYLFASALKVQCLCGNLIHPIAGACCTQCGLKVLEVRVEAHDRGTGRK*
Ga0066688_104029032	3300005178	Soil	MNMIVIFEDPATKHCQESKPYPFASALKVRCLCGNLIHPIPGAWCTQCGLKVLKVRTDFRRTLEAQTEN*
Ga0070711_1000594192	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNMIVIFEDPATKHCLEGKPYLFATALKVQCLCGNLINPIAGAWCTRCGLKVVEVRSDYAES*
Ga0070694_1004157651	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VPGHSPMNMIVVFEDQATKNCQEGEPYRFASALDVRCVCGHLIHPIPGAWCTQCGLKVLKVRSA*
Ga0070708_1000915422	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNMIVVFEDQATKQYQKSKPYAFATALDVQCPCGNLIHPMPGAWCPQCGTKVVEVRPESRN*
Ga0070708_1002814972	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNMVVIFEDQATKHCQEGKPYLFAGALKVRCLCGNLIHPIPGAWCTQCGLKVLEVRTDFRRTLEVQTEN*
Ga0066686_106823911	3300005446	Soil	MNMIVIFEDQATKHCQEGKPYLFASALKVECLCGNLIHPIPGAWCTQCGLKVLEVR
Ga0066682_102069731	3300005450	Soil	MNMIVIFENTATRQCQEGKPYLFASALKVRCFCGNIIHPIPGAWCTQCGLKVLEVRTDF
Ga0070699_1003894533	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VIFEDQATKHCQEGTPYPFASALDVRCLCGNFIHPIAGAWCTRCGLKVLEVRTDFRRTLEVQTEN*
Ga0070699_1005957692	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MNMVVIFEDQATKHCQEGTPYPFACALKVQCLCGNLIHPIAGAWCTQCGLKVLEVRRDFVAR*
Ga0070730_100148533	3300005537	Surface Soil	MNVVVVFEDQATKRCQEGTPYPFASALKVQCLCGSFINPIAGAWCTQCGLKVVEVRSER*
Ga0070732_100267084	3300005542	Surface Soil	MNIIVVFEDHATKQCQESTPYAFASALEVACPCGNLIHPIPGAWCTLCGTKVVEVRPKSRTQLLRAH*
Ga0070732_101900752	3300005542	Surface Soil	MNIVVVFEDQATKQRREGTPYPFASALEVRCLCGHLIHPSPGAWCTRCGLKVVQVRQEIVGLR*
Ga0070695_1002507772	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MNMIVVFENQTTMRCHDGKPYPFASALEVRCPCGHLIHPIPGAWCTHCGVKVLEVRQE*
Ga0070696_1000058618	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MNMVVVFENQTTMRCHDGKPYPFASALEVRCPCGHLIHPIPGAWCTHCGVKVLEVRQE*
Ga0066691_105548322	3300005586	Soil	MNMIVVFEDQATKHCEEGKPYLFASALKVRCLCGNLIHPIPGAWCTQCGLKVLE
Ga0066691_109192251	3300005586	Soil	MNLVVIFEDQATKHCQEGKPYLFASALKVQCLCGNLVHPIAGAWCTQCGLKVLQVRVEAHARCTDGKQTPPPYDV*
Ga0075029_1008074552	3300006052	Watersheds	MNIVVIFEDQATKQCQESKPYPFASALEVQCPCGNLIHPMPGSWCTLCGTKVLEVRPESRALRLSAH*
Ga0075017_1002421392	3300006059	Watersheds	MNIVVIFEDQATKQCQESKPYAFASALEVQCPCGNLIHPMPGSWCTLCGTKVLEVRPESRALRLSAH*
Ga0079221_110727051	3300006804	Agricultural Soil	TRPTRYSAMNMIVVFEDQATKQRQESSPYTFASTLDVRCVCGNLINAMPGAWCPRCGAKVVEVRLERRTEPLTTH*
Ga0075425_1007569513	3300006854	Populus Rhizosphere	VIFEDPATKHCLEGRPYLFASALKVQCLCGNLIHPIAGAWCTQCGLKVVEVRTDFAAH*
Ga0075426_101223541	3300006903	Populus Rhizosphere	MLNMIVVFEDQATKNCQDGKPYRFASALDVRCVCGHLIHPIPGAWCTQCGLRVLDVRRDWTAR*
Ga0075424_1001712444	3300006904	Populus Rhizosphere	MNMVVIFEDQATKHCQEGTPYPFASALKVQCLCGNLIHPIAGAWCTQCGLKVLEVRRDFVAR*
Ga0075436_1013244712	3300006914	Populus Rhizosphere	MNLIVVFEDQATKQCQPGKPYAFASALEVPCPCGNLIHPIPGAWCPQCGTKVLEVKSERRTEWPGIR*
Ga0075435_1011152312	3300007076	Populus Rhizosphere	MLNMIVVFEDQATKNCQDGKPYRFASALDVRCVCGHLIHPIPGAWCTQCGLKVLEVRR
Ga0099793_101429342	3300007258	Vadose Zone Soil	MNLVVIFEDPATKHCREGKPYLFASALNVQCLCGNLIHSIAGAWCTQCGLKVLEVRSE*
Ga0099829_103235881	3300009038	Vadose Zone Soil	MNMIVVFEDQATKQCQESKPYAFASALEVRCLCGNLIHPIPGAWCPQCGTKVVEVRPEDRTERLSTH*
Ga0099829_105095123	3300009038	Vadose Zone Soil	MNMIVVFEDQATKQCQESQPYAFASALEVRCLCGNLVHPIPGAWCPQCGAKVVEVRPERRTERLSIH*
Ga0099829_112074382	3300009038	Vadose Zone Soil	FEDQATKQCQESKPYAFASALEVRCLCGNLVHPIPGAWCPQCGAKVVEVRPERRTELN*
Ga0099829_116046382	3300009038	Vadose Zone Soil	MNMVVVFEDQATKHCAEGKPYLFATALKVPCLCGNLINPIAGAWCTRCGLKVLEVRTDFVAG*
Ga0099830_103499744	3300009088	Vadose Zone Soil	PYAFASALEVRCLCGNLIHPIPGAWCPQCGTKVVEVRPEDRTERLSTH*
Ga0099830_110899421	3300009088	Vadose Zone Soil	MNMIVVFEDQATKQCQESKPYAFASALEVRCLCGNLVHPIPGAWCPQCGTKVVEVRPESRTEWPSIH*
Ga0099830_111861131	3300009088	Vadose Zone Soil	MNMIVIFENTATRQCQEGKPYPFASALKVRCLCGNLIHPIPGAWCTQCGLKVLEVRTDFRRTLEVQTEN*
Ga0099830_113583481	3300009088	Vadose Zone Soil	MNMIVVFEDQATKQCQESRPYAFASALEVRCLCGNLVHPIPGAWCPQCGTKVVEVRPERR
Ga0099828_113774072	3300009089	Vadose Zone Soil	MNMIVVFEDQATKQYQESKPYAFATALDVQCPCGNLIHPMPGAWCPQCGTKVVEVRPESRTEWPSIH*
Ga0066709_1000610774	3300009137	Grasslands Soil	MNLVVVFEDQATKHCQEGKPYPFASALQVLCLCGNLINPIAGAWCTQCGLKVLEVRRDYTAR*
Ga0099792_104601842	3300009143	Vadose Zone Soil	MNMVVIFEDQATKHCQEGKPYLFASALDVRCLCGNFIHPIAGAWCTRCGLKVLEVRTDFRRTPEAQTEN*
Ga0116225_10792542	3300009524	Peatlands Soil	MNVTVIFEDPATRHHHESNPYAFASALDVRCICGNLIHPIPGAWCTRCGLKVLEVRQE*
Ga0136449_1000728404	3300010379	Peatlands Soil	MNIVVVFEDQATKQCQESKPYAFGSALEVRCPCGNLIHPIPGAWCTLCGIKVLEVRPESRTQRLSAH*
Ga0150983_142485543	3300011120	Forest Soil	MNIIVVFEDQATKQCQESKPYAFASALDVRCLCGNLVHPIPGAWCPQCGTKVVEVKPERRTQRFSTD*
Ga0150983_147847074	3300011120	Forest Soil	MNIVVVFEDQATKQCQESKPYAFATALDVQCPCGNLIHPIPGAWCPQCGTKVVEVKPESRPEWPGIH*
Ga0150983_148452011	3300011120	Forest Soil	AMNMIVVFEDRATKQFQESKPYAFASALDVQCPCGNLIHPIPGAWCPQCGARVVEVRPERRTERFSAY*
Ga0150983_149003871	3300011120	Forest Soil	KTAKRASPPSRNFPMNMIVVFEDQATKQCRESEPYAFASALDVQCPCGNLIHPIPGAWCPQCGTKVVEVRPESRTERLSIH*
Ga0150983_156553151	3300011120	Forest Soil	IVVLEDPATKDRQECTPYAFASALEVHCLCGILIHPIPAAWCTLCGRKVVDV*
Ga0137391_107614671	3300011270	Vadose Zone Soil	MNMIVVFEDQATKQCQESKPYAFASALEVRCLCGNLVHPIPGAWCPQCGAKVVEVRPERRTEILRAFLTLAHRLLTNRVYN*
Ga0137391_114161561	3300011270	Vadose Zone Soil	MNMIVVFEDQATKQCQESKPYAFASALEVRCLCGNLIHPMPGAWCPQCGTKVVEVRPERRTERLSIH*
Ga0137393_111004032	3300011271	Vadose Zone Soil	MNMIVVFEDQATKQCQESKPYAFASALEVRCLCGNLIHPIPGAWCPQCGTKVVEVRPESRTEWPSIH*
Ga0137393_117212211	3300011271	Vadose Zone Soil	MNMIVVFEDQATKQCQESKPYAFASALEVRCLCGNLVHPIPGAWCPQCGAKVVEVRPERRTELN*
Ga0137389_112704161	3300012096	Vadose Zone Soil	MNMIVVFEDQATKQCQESKPYAFASALEVRCLCGNLIHPMPGAWCPQCGTKVVEVKPEKRTQQLSTH*
Ga0137383_106406511	3300012199	Vadose Zone Soil	MNMVVIFEDQATKHCQEGKPYLFASALDVRCLCGNFIHPIAGAWCTQCGLKVVEVRTDFTAR*
Ga0137399_100950562	3300012203	Vadose Zone Soil	MNLVVIFEDPATKHCREGKPYLFASALNVQCLCGNLIHPIAGAWCTQCGLKVLEVRSE*
Ga0137399_117855442	3300012203	Vadose Zone Soil	MNMIVIFEDQATKHCQEGKPYLFASALKVQCLCGNLIHPIPGAWCTQCGLKVLGVRTDFRRTLEAQTEN*
Ga0137362_104610271	3300012205	Vadose Zone Soil	MNLVVIFEDQATKHCQEGKPYPFASALKVQCLCGNLIHPIAGAWCTQCGLKVMEVRTESSHVRGN*
Ga0137378_102727261	3300012210	Vadose Zone Soil	MNLVVIFEDQATKHCQEGKPYLFASALKVQCLCGNFIHPIAGAWCTQCGLKVLQVRVEAHDRGTDRK*
Ga0137366_102817552	3300012354	Vadose Zone Soil	MNLVVIFEDQATKHCQEGKPYVFASALKVQCLCGNLVHPIAGAWCTQCGLKVLQVRVEAHDRGTDRK*
Ga0137360_109040721	3300012361	Vadose Zone Soil	MNMVVIFEDQATKHCQEGKPYLFASALDVRCLCGNFIHPIAGAWCTRCGLKVLEVRTDFRRTLEVQTEN*
Ga0137360_113359081	3300012361	Vadose Zone Soil	MNMIVIFEDPATKHCQESKPYLFASALDVRCLCGNLIHPIAGAWCTQCGLKVLAVRTDFAAR*
Ga0137360_115584152	3300012361	Vadose Zone Soil	MNMVVIFEDQATKHCQEGKPYLFASALKVQCLCGNLIHPIPGAWCTQCGLKVLEVRSE*
Ga0137360_118574652	3300012361	Vadose Zone Soil	MNMVVVFEDPATEHWQEGTPYLFASALKVQCLCGNLINPIAGAWCTSCGLKVVEVRTDFVAG*
Ga0137361_108708601	3300012362	Vadose Zone Soil	MNLVVIFDDQATKHCQEGKPYVFASALKVQCLCGNLVHPIAGAWCTQCGLKVLEVRSE*
Ga0137361_109728433	3300012362	Vadose Zone Soil	MNVTVVFEDQATKHHQEGRPYAFASTLEVRCLCGNLIHPIPGAWCPLCGVKVVEVRQE*
Ga0137390_110704002	3300012363	Vadose Zone Soil	MNMIVVFEDQATKQCQESKPYAFASALEVRCLCGNLVHPIPGAWCPQCGTKVVEVRPERRTEILRAFLTLAHRLLTNRVYN*
Ga0137390_112074982	3300012363	Vadose Zone Soil	MNMIVVFEDQATKQCQESKPYAFASALEVRCLCGNLVHPIPGAWCPQCGAKVVEVRPERR
Ga0137397_109311842	3300012685	Vadose Zone Soil	MNMVVVFEHQATKHCQEGKPYLFASALHVPCLCGNFIHPIAGAWCTQCGLKVVEIRPEN*
Ga0137397_111024642	3300012685	Vadose Zone Soil	MNLVVIFEDPATKLCREGKPYLFASALNVQCLCGNLIHSIAGAWCTQCGLKVLEVRSE*
Ga0137396_106660052	3300012918	Vadose Zone Soil	IVIFEDQATKHCQEGKPYLFASALNVQCLCGNLIHPIPGAWCTQCGLKVLGVRTDFRRTLEAQTEN*
Ga0137394_114327821	3300012922	Vadose Zone Soil	MNMVVIFQDQATKHCQEGTPYVFATALKVPCLCGKFIHPIAGAWCTQCGLKVLEVRTDFRRTLKETASP*
Ga0137416_106906962	3300012927	Vadose Zone Soil	MNLVVIFEDPATKLCREGKPYQFASALNVQCLCGNLIHPIAGAWCTQCGLKVLEVRSE*
Ga0137416_116603432	3300012927	Vadose Zone Soil	MNMIVIFENTATRQCQEGKPYRFASALKVRCLCGNFIHPIPGAWCTQCGLKVLEVRTDFRRTPEAQTEN*
Ga0164301_111953012	3300012960	Soil	IFEDQATKHCQEGKPYPFASALKVQCPCGNFIHPIAGAWCTQCGLKVLEVRIA*
Ga0181521_102553062	3300014158	Bog	MNIIVVFENQATKQRQDSKPYAFASALEVLCVCGNLIHPIPGAWCAQCDAKVVEVRQR*
Ga0181536_102924301	3300014638	Bog	MNIIVVFENQATKQRQDSKPYAFASALEVRCVCGNLIHPIPGAWCAQCDAKVVEVRQR*
Ga0137420_13594721	3300015054	Vadose Zone Soil	MNLVVILEDPATKHCREGKPYLFASALNVQCLCGNLIHPIAGAWCTQCGLKVLEVRSE*
Ga0187802_102609711	3300017822	Freshwater Sediment	MNMIVVFEDQATKQCQESKPYAFASALEVPCLCGNLIHPILGAWCPQCGLKVVEVRQA
Ga0187806_12553891	3300017928	Freshwater Sediment	IVVVFEDRATQKRRESSPYAFASTLDVRCLCGNLIHPIVGVWCPQCGARVVEVRLEKHNAAA
Ga0187819_100601983	3300017943	Freshwater Sediment	LNIVVVFEDRATQKRRESSPYAFASTLDVRCLCGNLIHPIVGVWCPQCGAKVVEVRLERPNAAA
Ga0187817_109507601	3300017955	Freshwater Sediment	FEDQATKNCQEGKPYPFASALEVRCPCGNFIHPIRGAWCPQCGLKVVKIRVEQLSCANPSRDS
Ga0187769_100050879	3300018086	Tropical Peatland	LKVVVVFEDPATKLHKEGRPFTFASTLDVRCLCGNLVHPIIGAWCPRCGAKVVEVRLERTRDAVAKP
Ga0066655_105057051	3300018431	Grasslands Soil	MNLVVVFEDQATKHCQEGKPYPFASALQVLCLCGNLINPIAGAWCTQCGLKVLEVRRDYTAR
Ga0210407_100010253	3300020579	Soil	MNMIVVFEDPVTKRYQESEPYAFASALDVQCPCGNLIHPIPGAWCPQCGTK
Ga0210407_100044864	3300020579	Soil	MNMIVVFEDQATKQCQESKPYAFASALEVRCLCGNLVHPIPGAWCPQCGAKVVEVRPERRTELN
Ga0210407_106492153	3300020579	Soil	MNMIVVFEDQATKQCQESKPYAFATALDVQCPCGNLIHPIPGAWCPQCGTKVVEVKPERETAWSSIH
Ga0210403_101766463	3300020580	Soil	MNMIVVFEDQATKQCQESKPYAFATALDVQCPCGNLIHPIPGAWCPQCGTKVVEVKPERGTAWSSIH
Ga0210406_101928871	3300021168	Soil	MNIIVVFEDQATKQCQESKPYAFASALDVRCLCGNLVHPIPGAWCPQCGTKVV
Ga0210406_109677961	3300021168	Soil	MNMIVVFEDQATKQCRESKPYAFASALEVRCLCGNFVHPIPGTWCPQCGMKVVEVRPERRTEWRSIH
Ga0210400_104867502	3300021170	Soil	MNIIVVFEDQATKQCQESKPYAFASALDVRCLCGNLVHPIPGAWCPQCGTKVVEVKPERRTQRFSTD
Ga0210393_103514122	3300021401	Soil	MNMIVVFEDQATKQCQESKPYAFASALEVRCLCGNLVHPIPGAWSPQCGAKVVEVRPERRTELN
Ga0210384_107062781	3300021432	Soil	PVTKRYQESEPYAFASALDVQCPCGNLIHPIPGAWCPQCGTKVVEVRPESRTERLSIH
Ga0210409_102554442	3300021559	Soil	MNMIVVFEDQATKQCRESEPYAFASALDVQCPCGNLIHPIPGAWCPQCGTKVVEVRPESRTERLSIH
Ga0210409_107629532	3300021559	Soil	MNIIVVFEDQATKQCQESKPYAFASALDVRCLCGNLVHPIPGAWCPQCGTKVVEVKPERRTERFSTD
Ga0247670_10007108	3300024283	Soil	MNMVVIFEDQATKHCQEGKPYLFASALKVQCPCGNLVYPIPGAWCTQCGLKVLEVRRDYTAH
Ga0207646_118315312	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MNMIVVFEDQATKQYQKSKPYAFATALDVQCPCGNLIHPMPGAWCPQCGTKVVEVRPESR
Ga0209648_103144761	3300026551	Grasslands Soil	MNMIVVFEDQATKQCQESKPYAFASALEVRCLCGNLVHPIPGAWCPQCGTKVVEVRPERRTEWPSIH
Ga0209648_105018532	3300026551	Grasslands Soil	MNMIVVFEDQATKQCQESKPYAFASALEVRCLCGNLIHPIPGAWCPQCGTKVVEVRPEDRTERLSTH
Ga0209648_105050442	3300026551	Grasslands Soil	MNMVVIFEDQATKHCQEGKPYLFASALDVRCLCGNFIHPIAGAWCTRCGLKVLEVRTDFRRTLEVQTEN
Ga0208199_100016820	3300027497	Peatlands Soil	MNIIVVFEDQATKQRQDGKPYAFASALEVPCLCGNLIHPFPGAWCTGCGAKVVEVRQQENRTR
Ga0209580_101618342	3300027842	Surface Soil	MNIVVVFEDQATKQRREGTPYPFASALEVRCLCGHLIHPSPGAWCTRCGLKVVQVRQEIVGLR
Ga0209180_102787342	3300027846	Vadose Zone Soil	MNMVVIFEDQATKHCQEGKPYLFASALKVQCLCGNLIHPIAGAWCTQCGLKVLEVRSE
Ga0209517_100303502	3300027854	Peatlands Soil	MNVTVIFEDPATRHHHESNPYAFASALDVRCICGNLIHPIPGAWCTRCGLKVLEVRQE
Ga0209698_104276772	3300027911	Watersheds	MNIVVIFEDQATKQCQESKPYAFASALEVQCPCGNLIHPMPGSWCTLCGTKVLEVRPESRALRLSAH
Ga0137415_100336939	3300028536	Vadose Zone Soil	MNLVVIFEDPATKHCREGKPYLFASALNVQCLCGNLIHSIAGAWCTQCGLKVLEVRSE
Ga0137415_104796912	3300028536	Vadose Zone Soil	MNMIVIFENTATRQCQEGKPYRFASALKVRCLCGNFIHPIPGAWCTQCGLKVLEVRTDFRRTPEAQTEN
Ga0170824_1215765482	3300031231	Forest Soil	MNMVVIFEDQATKHCQEGKPYLLASALDVRCLCGNFIHPIAGAWCTRCGLKVLEVRTDFRRTLEVQTEN
Ga0310686_1116112061	3300031708	Soil	MNISVVFEDQETKQHQEGKPYTFASALEVPCPCGNLIHPIPGAWCTQCGLKVVEIRQR
Ga0307475_106695532	3300031754	Hardwood Forest Soil	MNVIVVLEDQATKHCQESSPYRFASALEVRCICGNLIHPIPGAWCTQCGAKVVEVRPET
Ga0307479_103567143	3300031962	Hardwood Forest Soil	MNMIVVFEDQATKQCEESKPYAFASALEVRCLCGNLIHPIPGAWCPQCGTKVVEVRPERRTESRSIH
Ga0307479_108321442	3300031962	Hardwood Forest Soil	MNMIVVFEDRATKQFQESKPYAFASALDVQCPCGNFIHPIPGAWCPQCGAKVVEVRPERRTERFSAY
Ga0307479_109891123	3300031962	Hardwood Forest Soil	GREFNFQFHRNRAMNVIVVLEDQATKHCQESSPYRFASALEVRCICGNLIHPIPGAWCTQCGAKVVEVRPET
Ga0307479_114760501	3300031962	Hardwood Forest Soil	MNMIVVFEDQATKQCRESKPYAFASALEVRCLCGNFVHPIPGAWCPQCGMKVVEVRPERRTEWRSIH
Ga0311301_101268973	3300032160	Peatlands Soil	MNIVVVFEDQATKQCQESKPYAFGSALEVRCPCGNLIHPIPGAWCTLCGIKVLEVRPESRTQRLSAH
Ga0311301_103249952	3300032160	Peatlands Soil	MNMIVVFEDQATKQRQDGKPYAFASALEVPCLCGNLIHPFPGAWCTGCGAKVVEVRQQENRTR
Ga0307471_1009791452	3300032180	Hardwood Forest Soil	MNIIVVFEDQATKQCQESKPYAFASALDVRCLCGNLVHPIPGAWCPQCGTKV
Ga0348332_117865462	3300032515	Plant Litter	MNIIVVYEDQATKRRQEGKPYAFASALEVRCLCGNLIHPIPGAWCTQCRLKVLDVRSA
Ga0335082_116868771	3300032782	Soil	MNIIVVFEDQATKQRQESKPYALGSALEVQCPCGNLMHPIPGAWCTQCGTKVLEVRAENRTQRPSAE
Ga0335079_100488084	3300032783	Soil	MNIVVVFEDQATKQRQDGKPYVFASALEVPCLCGNLIHPFPGAWCRQCGAKVVEVRQQENKTP
Ga0335079_116305922	3300032783	Soil	LNIVVVFEDPSTKQRRESKPYAFASTLDVRCLCGNLIHPIVGVCCPQCRAKVVEVRREYGKA
Ga0335080_104193092	3300032828	Soil	MNIVVVFEDQATKQRQDGKPYAFASALEVPCLCGNLIHPIAGSWCTQCGTKVVEVRQQENGTR
Ga0335084_110055372	3300033004	Soil	MNIIVVFEDQATKQCQESKPYAFGSALEVQCPCGNLMHPIPGAWCTQCGTKVLEVRAENRTQRP
Ga0326728_1002154812	3300033402	Peat Soil	MNMIVVFEDQATKRCQEGKPYAFASALEVRCMCGNLIHPFPGAWCTQCGLKVVEVRQR
Ga0326728_100380856	3300033402	Peat Soil	MNMIVVFEDQATKQRQDSKPYAFASALDVRCMCGNLIHPIPGAWCTKCGAKVVEVRRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063474

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences